mRNA_P-wetherbeei_contig9985.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9985.1.1
Unique NamemRNA_P-wetherbeei_contig9985.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9985.1.1 vs. uniprot
Match: A0A397VYE5_9GLOM (Permease family-domain-containing protein n=4 Tax=Gigaspora TaxID=4873 RepID=A0A397VYE5_9GLOM)

HSP 1 Score: 165 bits (418), Expect = 1.280e-45
Identity = 84/147 (57.14%), Postives = 107/147 (72.79%), Query Frame = 1
Query:    1 MHDKRMWLGIGGATIIALLMCKGVKGAIIVGILFVSIISWFRGTAVTYFPNTEDGDARFNYFKKVVMFQPIRETAGAVEFNLGNVDVWIALITFLYTDLLDTTGTLYSIAKQAGFLDVKTGDFKRSRHAFSCDACSTIAAGCLGSSP 441
            M     WLGI G  II  L+   VKG++ +GILF+SI+SWFR + VTYFP TE+G+ARF++FKKVV F P+ +T GA+ F++G  DVW+ALITFLY D+LDTTGTLYS+AK +GFLD + GDF+ S  AF CDA S       G+SP
Sbjct:  232 MESPTTWLGILGFLIIVTLLLFRVKGSMFLGILFISIVSWFRNSQVTYFPYTEEGNARFDFFKKVVSFHPMEKTLGAMRFDIGTSDVWVALITFLYLDILDTTGTLYSMAKFSGFLD-EHGDFEGSTAAFICDALSISIGSIFGTSP 377          
BLAST of mRNA_P-wetherbeei_contig9985.1.1 vs. uniprot
Match: A0A8H4AMQ7_GIGMA (Purine transporter n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4AMQ7_GIGMA)

HSP 1 Score: 157 bits (398), Expect = 3.530e-44
Identity = 80/146 (54.79%), Postives = 105/146 (71.92%), Query Frame = 1
Query:    1 MHDKRMWLGIGGATIIALLMCKGVKGAIIVGILFVSIISWFRGTAVTYFPNTEDGDARFNYFKKVVMFQPIRETAGAVEFNLGNVDVWIALITFLYTDLLDTTGTLYSIAKQAGFLDVKTGDFKRSRHAFSCDACSTIAAGCLGSS 438
            M     WLGI G  II +L+   VKG+I +GI+F+SIISWFR + VTYFP T++G+ARFN+FK VV F  + +T GA+ FNLG+ DVW+A+ITFLY D+LDTTG LYS+A+   FLD +TGDF+ S  AF C+A S   +   G+S
Sbjct:   38 MESPTTWLGILGFLIIVILLLFRVKGSIFIGIVFISIISWFRNSEVTYFPYTDEGNARFNFFKSVVGFHTMEKTLGAMHFNLGSSDVWLAIITFLYIDMLDTTGVLYSMARLGDFLD-ETGDFEGSNAAFICNASSISISAIFGTS 182          
BLAST of mRNA_P-wetherbeei_contig9985.1.1 vs. uniprot
Match: D8S9A5_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S9A5_SELML)

HSP 1 Score: 159 bits (401), Expect = 4.340e-43
Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1
Query:    1 MHDKRMWLGIGGATIIALLMCKGVKGAIIVGILFVSIISWFRGTAVTYFPNTEDGDARFNYFKKVVMFQPIRETAGAVEF-NLGNVDVWIALITFLYTDLLDTTGTLYSIAKQAGFLDVKTGDFKRSRHAFSCDACSTIAAGCLGSSP 441
            M D  +WLG+ G  IIA  + +GVKGA+I GI+FV+ ISWFRGT VTYFPNT+ G+A ++YF+KVV    I+ TAGA+ F  +G    W+ALITFLY D+LDTTGTLYS+AK AGF+D + GDF+    AF  DA + +    LG+SP
Sbjct:  281 MEDPTLWLGVVGFVIIAYAIVRGVKGAMIYGIVFVTGISWFRGTKVTYFPNTDAGNAAYSYFRKVVDVHTIKGTAGALSFAEIGKSQFWVALITFLYVDILDTTGTLYSMAKFAGFVD-ENGDFEGQYQAFMSDAAAIVVGSALGTSP 427          
BLAST of mRNA_P-wetherbeei_contig9985.1.1 vs. uniprot
Match: A0A4P9Y8W8_9FUNG (Permease family-domain-containing protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y8W8_9FUNG)

HSP 1 Score: 157 bits (398), Expect = 8.380e-43
Identity = 82/147 (55.78%), Postives = 106/147 (72.11%), Query Frame = 1
Query:    1 MHDKRMWLGIGGATIIALLMCKGVKGAIIVGILFVSIISWFRGTAVTYFPNTEDGDARFNYFKKVVMFQPIRETAGAVEFNLGNVDVWIALITFLYTDLLDTTGTLYSIAKQAGFLDVKTGDFKRSRHAFSCDACSTIAAGCLGSSP 441
            M   RMWLGIGG T+I LL+   VKG+I++GIL VSIISW R TAVT FP TE GD  ++YFK VV   PI+ TAGA++F+LG+ ++W+ALITFLY D+LDTTGT++S+AK  G++D + GDF  S  AF  DA +      LG+ P
Sbjct:  242 MESARMWLGIGGFTLICLLLLYRVKGSILIGILLVSIISWPRSTAVTNFPYTEAGDRAWDYFKNVVDVHPIQMTAGALDFDLGSGEIWVALITFLYVDILDTTGTMFSMAKFGGYMDER-GDFAGSTMAFCSDAFAVSIGALLGTPP 387          
BLAST of mRNA_P-wetherbeei_contig9985.1.1 vs. uniprot
Match: A0A197KB76_9FUNG (Uncharacterized protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KB76_9FUNG)

HSP 1 Score: 159 bits (401), Expect = 8.940e-43
Identity = 76/134 (56.72%), Postives = 102/134 (76.12%), Query Frame = 1
Query:    1 MHDKRMWLGIGGATIIALLMCKGVKGAIIVGILFVSIISWFRGTAVTYFPNTEDGDARFNYFKKVVMFQPIRETAGAVEFNLGNVDVWIALITFLYTDLLDTTGTLYSIAKQAGFLDVKTGDFKRSRHAFSCDA 402
            M   R W+G+ G  II++L+   VKGAI++GILFV+I+SWFRGT+VTYFPN   GD+RF+YFK+VV F  I++T   ++F L   + W+ALITFLY D+LDTTGT++S+A+ AGF+D KTGDF+ S  AF  DA
Sbjct:  262 MESPRTWMGVLGLFIISILVLYKVKGAILIGILFVAIVSWFRGTSVTYFPNDPMGDSRFSYFKQVVSFHTIQKTWAVMDFQLNTGEFWLALITFLYVDILDTTGTMFSMAQFAGFMDPKTGDFEGSTPAFITDA 395          
BLAST of mRNA_P-wetherbeei_contig9985.1.1 vs. uniprot
Match: A0A397UYZ1_9GLOM (Nucleoside transporter n=7 Tax=Gigaspora TaxID=4873 RepID=A0A397UYZ1_9GLOM)

HSP 1 Score: 157 bits (398), Expect = 9.760e-43
Identity = 80/146 (54.79%), Postives = 105/146 (71.92%), Query Frame = 1
Query:    1 MHDKRMWLGIGGATIIALLMCKGVKGAIIVGILFVSIISWFRGTAVTYFPNTEDGDARFNYFKKVVMFQPIRETAGAVEFNLGNVDVWIALITFLYTDLLDTTGTLYSIAKQAGFLDVKTGDFKRSRHAFSCDACSTIAAGCLGSS 438
            M     WLGI G  II +L+   VKG+I +GI+F+SIISWFR + VTYFP T++G+ARFN+FK VV F  I +T GA+ F+LG+ DVW+A+ITFLY D+LDTTG LYS+A+   FLD +TGDF+ S  AF C+A S   +   G+S
Sbjct:  232 MESPTTWLGILGFLIIVILLLFRVKGSIFIGIVFISIISWFRNSEVTYFPYTDEGNARFNFFKSVVGFHTIEKTLGAIHFDLGSSDVWLAIITFLYIDMLDTTGVLYSMARLGDFLD-ETGDFEGSNAAFICNASSISISAIFGTS 376          
BLAST of mRNA_P-wetherbeei_contig9985.1.1 vs. uniprot
Match: D8SVM2_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SVM2_SELML)

HSP 1 Score: 154 bits (389), Expect = 2.250e-41
Identity = 80/148 (54.05%), Postives = 105/148 (70.95%), Query Frame = 1
Query:    1 MHDKRMWLGIGGATIIALLMCKGVKGAIIVGILFVSIISWFRGTAVTYFPNTEDGDARFNYFKKVVMFQPIRETAGAVEF-NLGNVDVWIALITFLYTDLLDTTGTLYSIAKQAGFLDVKTGDFKRSRHAFSCDACSTIAAGCLGSSP 441
            M D  +WLG+ G  IIA  + +GVKGA+I GI+FV+ ISWFRGT VTYFP T+ G+A ++YF++VV    I+ TAGA+ F  +G    W+ALITFLY D+LDTTGTLYS+AK AG++D K GDF+    AF  DA + +    LG+SP
Sbjct:  293 MEDPTLWLGVVGFVIIAYALVRGVKGAMIYGIVFVTGISWFRGTQVTYFPYTDAGNAAYSYFREVVDVHTIKGTAGALSFAEIGKSQFWVALITFLYVDILDTTGTLYSMAKFAGYVDEK-GDFEGQYQAFMSDAAAIVVGSALGTSP 439          
BLAST of mRNA_P-wetherbeei_contig9985.1.1 vs. uniprot
Match: A0A1X2H1T9_SYNRA (Permease family-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H1T9_SYNRA)

HSP 1 Score: 154 bits (389), Expect = 2.590e-41
Identity = 77/147 (52.38%), Postives = 101/147 (68.71%), Query Frame = 1
Query:    1 MHDKRMWLGIGGATIIALLMCKGVKGAIIVGILFVSIISWFRGTAVTYFPNTEDGDARFNYFKKVVMFQPIRETAGAVEFNLGNVDVWIALITFLYTDLLDTTGTLYSIAKQAGFLDVKTGDFKRSRHAFSCDACSTIAAGCLGSSP 441
            M     ++GI G  I+ +L+   V+GAI++ I+F+SI SW R   VTYFP TE+GDA F+YFKKVV  +P+       EF+L N D+W+ALITFLY D+LDTTGT+YS+A+  GF D K+GDF+ S +AF  DA S I   C GSSP
Sbjct:  235 MESPTTYMGILGLVIMTILLMYRVRGAILIAIVFISITSWPRVNKVTYFPYTENGDAMFDYFKKVVTVRPLTHVLAQFEFDLSNRDIWVALITFLYVDILDTTGTMYSMARYGGFTD-KSGDFEHSTYAFMSDAVSVIVGSCFGSSP 380          
BLAST of mRNA_P-wetherbeei_contig9985.1.1 vs. uniprot
Match: A0A6V7PDD9_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7PDD9_ANACO)

HSP 1 Score: 144 bits (363), Expect = 2.790e-41
Identity = 78/148 (52.70%), Postives = 100/148 (67.57%), Query Frame = 1
Query:    1 MHDKRMWLGIGGATIIALLMCKGVKGAIIVGILFVSIISWFRGTAVTYFPNTEDGDARFNYFKKVVMFQPIRETAGAVEF-NLGNVDVWIALITFLYTDLLDTTGTLYSIAKQAGFLDVKTGDFKRSRHAFSCDACSTIAAGCLGSSP 441
            M     WL + G  +IAL + K VKGA+I G++FV+ +SWFR TAVT FP+T  GDA + YF+KVV   PIR TA A+ F +L     W AL+TFLY D+LDTTGTLYS+A+ AGF+D K GDF+    AF  DA + +A   LG+SP
Sbjct:    1 MLSPTFWLALVGFLLIALCLIKNVKGAMIFGVVFVTAVSWFRNTAVTAFPDTPQGDAAYAYFRKVVDVHPIRSTAAALSFRDLSKGFFWEALVTFLYVDILDTTGTLYSMARFAGFVDDK-GDFEGQYFAFMSDAAAIVAGSLLGTSP 147          
BLAST of mRNA_P-wetherbeei_contig9985.1.1 vs. uniprot
Match: A0A197JJW0_9FUNG (Xanthine/uracil permease n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JJW0_9FUNG)

HSP 1 Score: 153 bits (386), Expect = 5.710e-41
Identity = 76/147 (51.70%), Postives = 99/147 (67.35%), Query Frame = 1
Query:    1 MHDKRMWLGIGGATIIALLMCKGVKGAIIVGILFVSIISWFRGTAVTYFPNTEDGDARFNYFKKVVMFQPIRETAGAVEFNLGNVDVWIALITFLYTDLLDTTGTLYSIAKQAGFLDVKTGDFKRSRHAFSCDACSTIAAGCLGSSP 441
            M     W+G+ G  II++ +   VKGA+++GIL VSI+SWFR T+ TYFP+T  GDA+F +FKKVV F PI+ T   ++F L N ++WIALITFLY D++DTTGTLYS+AK  G++  K GDF  S  AF CDA S       G  P
Sbjct:  232 MESPTTWIGLFGFVIISVCLLFRVKGAVLIGILVVSIMSWFRNTSFTYFPDTPTGDAKFEFFKKVVTFHPIQTTMAKMDFTLDNTEIWIALITFLYVDIMDTTGTLYSMAKFGGYM-YKNGDFDGSTAAFLCDATSITVGAVFGVPP 377          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9985.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A397VYE5_9GLOM1.280e-4557.14Permease family-domain-containing protein n=4 Tax=... [more]
A0A8H4AMQ7_GIGMA3.530e-4454.79Purine transporter n=1 Tax=Gigaspora margarita Tax... [more]
D8S9A5_SELML4.340e-4355.41Uncharacterized protein n=1 Tax=Selaginella moelle... [more]
A0A4P9Y8W8_9FUNG8.380e-4355.78Permease family-domain-containing protein n=1 Tax=... [more]
A0A197KB76_9FUNG8.940e-4356.72Uncharacterized protein n=1 Tax=Linnemannia elonga... [more]
A0A397UYZ1_9GLOM9.760e-4354.79Nucleoside transporter n=7 Tax=Gigaspora TaxID=487... [more]
D8SVM2_SELML2.250e-4154.05Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
A0A1X2H1T9_SYNRA2.590e-4152.38Permease family-domain-containing protein n=1 Tax=... [more]
A0A6V7PDD9_ANACO2.790e-4152.70Uncharacterized protein n=1 Tax=Ananas comosus var... [more]
A0A197JJW0_9FUNG5.710e-4151.70Xanthine/uracil permease n=1 Tax=Linnemannia elong... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9985contigP-wetherbeei_contig9985:993..2153 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog88036.EFJ18930
PFAMsXan_ur_permease
Model size441
Max annot lvl35493|Streptophyta
KEGG koko:K06901
KEGG TC2.A.1.40
Hectar predicted targeting categorysignal peptide
Exons4
Evalue7.12e-44
EggNOG OGsCOG2252@1|root,2QQ5E@2759|Eukaryota,37KKT@33090|Viridiplantae,3GB4N@35493|Streptophyta
DescriptionAdenine guanine permease
Cds size441
COG categoryS
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187119.7671366-CDS-P-wetherbeei_contig9985:992..11491683187119.7671366-CDS-P-wetherbeei_contig9985:992..1149Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9985 993..1149 -
1683187119.7800474-CDS-P-wetherbeei_contig9985:1377..14021683187119.7800474-CDS-P-wetherbeei_contig9985:1377..1402Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9985 1378..1402 -
1683187119.7922418-CDS-P-wetherbeei_contig9985:1684..18161683187119.7922418-CDS-P-wetherbeei_contig9985:1684..1816Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9985 1685..1816 -
1683187119.8137774-CDS-P-wetherbeei_contig9985:2026..21531683187119.8137774-CDS-P-wetherbeei_contig9985:2026..2153Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9985 2027..2153 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9985.1.1prot_P-wetherbeei_contig9985.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9985 993..2153 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9985.1.1

>prot_P-wetherbeei_contig9985.1.1 ID=prot_P-wetherbeei_contig9985.1.1|Name=mRNA_P-wetherbeei_contig9985.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp
MHDKRMWLGIGGATIIALLMCKGVKGAIIVGILFVSIISWFRGTAVTYFP
NTEDGDARFNYFKKVVMFQPIRETAGAVEFNLGNVDVWIALITFLYTDLL
DTTGTLYSIAKQAGFLDVKTGDFKRSRHAFSCDACSTIAAGCLGSSP
back to top

mRNA from alignment at P-wetherbeei_contig9985:993..2153-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9985.1.1 ID=mRNA_P-wetherbeei_contig9985.1.1|Name=mRNA_P-wetherbeei_contig9985.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1161bp|location=Sequence derived from alignment at P-wetherbeei_contig9985:993..2153- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACGACAAGCGCATGTGGCTGGGCATCGGCGGTGCAACCATCATCGC ATTGCTCATGTGCAAGGGCGTCAAGGGGGCCATCATCGTCGGCATCCTCT TCGTTTCCATCATCTCCTGGTTCCGCGGTGCGTCCGTCCTTTTCGTGTGC TTCTTCCTTCTCTATCTCTTCTTTTTGCTGCCGTGCTTTGTCTCTGGGTT TCTGCTTCTTTGCTCCTTTGCGCCGCCCTTTGTCTTTTCCATCTCCGTTC CCCACCATTTTCTTCCTTTCTTCCGGTTCCGGGTTATCCCTCGACAACGG CTCCTTCTCCGAAACCTAAATCCAAACTCGGATACAGGAACGGCCGTGAC GTACTTCCCGAACACGGAGGACGGAGACGCGCGCTTCAACTACTTCAAGA AGGTCGTCATGTTTCAGCCGATCCGCGAGACTGCGGGCGCCGTCGAATTC AACCTTGGCAATGTCGACGGTGAGTATGCCGAGCTTGTGCTTTGGGCAGC CAGCTGGCAGCCAGCATTTGACCTGTTAGCCCTGGACGTTTAAGCAGTTG AGCTGGTGTTTGGGCCCTTTCACTGGTCTGATCCATTTTGGGTTTCGAAC GGTTTTGCAGTGGCTGTTTGGGCCGCTGTCGTGAGGCAATGTGGTCGCCG TCCTCTCTTACAACCGCCCGTGGCAGAATGTGAAACAAAAATGAAACTTA ATCCGTCCTCTTGGTCGGTTGCTGCCCCCCCGTCTCTCCGAATGAACGCA GTCTGGATTGCCCTCATCACCTTCCTGTGAGAACGATCGGTGTCTCTAAG ACTACGGAGAAAGGAATTTGCCGCTTGCCACCGCGTTTTCTTTGTGCAAC CCAGCGGCCTTGCTCGCCTCGGCTGCCTTGCGCCAGCTGTAGCACCGGCC GCTGCCCTTACGGGTTCTCTCTTTCCCTTTCCCTGCCTCTTTCTGACGGA AACGTATCTTGGACCCCCCCCCTTCCCAACGAACCCCTCAACCGATCATC GCAGGTACACGGACCTGCTGGACACGACGGGCACGCTCTACTCCATCGCC AAGCAGGCGGGGTTTCTCGATGTCAAGACTGGAGACTTTAAGCGCTCCCG CCACGCCTTCTCGTGCGATGCTTGTTCCACCATCGCTGCCGGCTGCCTCG GGTCAAGCCCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig9985:993..2153-

>mRNA_P-wetherbeei_contig9985.1.1 ID=mRNA_P-wetherbeei_contig9985.1.1|Name=mRNA_P-wetherbeei_contig9985.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig9985:993..2153- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACGACAAGCGCATGTGGCTGGGCATCGGCGGTGCAACCATCATCGC
ATTGCTCATGTGCAAGGGCGTCAAGGGGGCCATCATCGTCGGCATCCTCT
TCGTTTCCATCATCTCCTGGTTCCGCGGAACGGCCGTGACGTACTTCCCG
AACACGGAGGACGGAGACGCGCGCTTCAACTACTTCAAGAAGGTCGTCAT
GTTTCAGCCGATCCGCGAGACTGCGGGCGCCGTCGAATTCAACCTTGGCA
ATGTCGACGTCTGGATTGCCCTCATCACCTTCCTGTACACGGACCTGCTG
GACACGACGGGCACGCTCTACTCCATCGCCAAGCAGGCGGGGTTTCTCGA
TGTCAAGACTGGAGACTTTAAGCGCTCCCGCCACGCCTTCTCGTGCGATG
CTTGTTCCACCATCGCTGCCGGCTGCCTCGGGTCAAGCCCC
back to top