mRNA_P-wetherbeei_contig9957.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9957.1.1
Unique NamemRNA_P-wetherbeei_contig9957.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A7K1B4U9_9ACTN (Tryptophan synthase alpha chain n=2 Tax=root TaxID=1 RepID=A0A7K1B4U9_9ACTN)

HSP 1 Score: 404 bits (1038), Expect = 1.080e-140
Identity = 213/255 (83.53%), Postives = 229/255 (89.80%), Query Frame = 1
Query:    1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAIDG 765
            +G +E   R KRSAGRKLLVPYITGG PGW DA+RAA A GADAIEIGIPFSDPVMDGPVIQQASQ ALDAGA PVSIL++AR LDV +PLAVM YYNTVHHAGH RFAEQL AAGI AAIVPDLPLEESG WC+AADAS +ETVMLAAPTAPD+RLPRV ARARGFVYSVGLLGVTGER+ LAATATALA RLKA+TDVP+LVGVGVSNAEQA EAV+VADGVVQGASV+RR+L+ G DAVGEYVA VRAAIDG
Sbjct:    7 YGRMEQSFRDKRSAGRKLLVPYITGGLPGWEDALRAAVAAGADAIEIGIPFSDPVMDGPVIQQASQLALDAGATPVSILDQARALDVDVPLAVMCYYNTVHHAGHHRFAEQLVAAGICAAIVPDLPLEESGPWCEAADASDVETVMLAAPTAPDDRLPRVCARARGFVYSVGLLGVTGERSALAATATALARRLKAVTDVPVLVGVGVSNAEQAREAVQVADGVVQGASVVRRLLEGGADAVGEYVAEVRAAIDG 261          
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A539DQF8_9ACTN (Tryptophan synthase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DQF8_9ACTN)

HSP 1 Score: 403 bits (1035), Expect = 3.190e-140
Identity = 214/253 (84.58%), Postives = 226/253 (89.33%), Query Frame = 1
Query:    4 GVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAID 762
            G LE  LR KRSAGRKLLVPYITGG PGW  AVRAAAA GADAIEIGIPFSDPVMDGPVIQQASQ ALD GA PVSIL+EAR LDVGIPLAVMTYYNTVHHAGH RFAE L A+GIVAAIVPDLPL+E+G WC+AADAS IETVMLAAPTAPD RLPR+ ARARGFVYSVGLLGVTGER  LAATATALAARLKAITDVP+LVGVGVS+A QA +AV+VADGVVQGASVMRR L+ G DAVGEYVA VR+AID
Sbjct:    9 GALERALRIKRSAGRKLLVPYITGGLPGWEHAVRAAAAAGADAIEIGIPFSDPVMDGPVIQQASQRALDCGATPVSILDEARGLDVGIPLAVMTYYNTVHHAGHHRFAESLAASGIVAAIVPDLPLDEAGPWCEAADASSIETVMLAAPTAPDARLPRICARARGFVYSVGLLGVTGERTTLAATATALAARLKAITDVPVLVGVGVSDAAQARQAVQVADGVVQGASVMRRFLEGGADAVGEYVAEVRSAID 261          
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A6J6QML2_9ZZZZ (Tryptophan synthase n=3 Tax=root TaxID=1 RepID=A0A6J6QML2_9ZZZZ)

HSP 1 Score: 400 bits (1029), Expect = 2.710e-139
Identity = 204/254 (80.31%), Postives = 227/254 (89.37%), Query Frame = 1
Query:    1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAID 762
            +GV+ETE RAKR+ GRKLLVPYITGG+PGW DAVRA AA GADAIEIGIPFSDPVMDGP+IQQASQ AL+ GA PVSIL E R LDV +P+AVM YYNTVHHAGH RFA QLR+AG+VAAIVPDLPLEESG WC AADA+GIETVMLAAPTAPDERLPRVAAR+RGF+YSVGLLGVTGER +LAATA ALA RLKA+TDVP+L+GVGVSNA QA EAV+VADGVV GASV+RR+++ G DAVGEY+A VR AID
Sbjct:    9 YGVMETEFRAKRAVGRKLLVPYITGGYPGWQDAVRACAAAGADAIEIGIPFSDPVMDGPIIQQASQAALEGGATPVSILHEVRSLDVSVPIAVMLYYNTVHHAGHERFAAQLRSAGVVAAIVPDLPLEESGPWCAAADAAGIETVMLAAPTAPDERLPRVAARSRGFLYSVGLLGVTGERTELAATAAALAVRLKAVTDVPVLIGVGVSNAAQAKEAVQVADGVVMGASVVRRLIEGGADAVGEYIAEVRRAID 262          
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A6I3WNB0_9ACTN (Tryptophan synthase alpha chain n=4 Tax=root TaxID=1 RepID=A0A6I3WNB0_9ACTN)

HSP 1 Score: 394 bits (1012), Expect = 8.500e-137
Identity = 206/253 (81.42%), Postives = 225/253 (88.93%), Query Frame = 1
Query:    1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAI 759
            FG +ETE RAKR AGRKLLVPYITGG  GW  A+RAAA  GADAIEIGIPFSDPVMDGP+IQ+ASQ ALDAG  PVSI EEAR+L+VGIPLAVM YYNTVHHAGH RFA QL +AGI AAIVPDLPLEESG WC AADA+GIETVMLAAPTAPD+RLPR+AARARGFVYSVGLLGVTGERA LA +ATALA RLKAITDVP+LVGVGVSNAEQA +A  VADGV+QGASV+RR++D GP+AVGEYV+ VRAAI
Sbjct:    3 FGRMETEFRAKRDAGRKLLVPYITGGLTGWQQAIRAAADAGADAIEIGIPFSDPVMDGPIIQEASQRALDAGVTPVSIFEEARELEVGIPLAVMCYYNTVHHAGHERFAYQLLSAGISAAIVPDLPLEESGLWCTAADAAGIETVMLAAPTAPDDRLPRIAARARGFVYSVGLLGVTGERASLAESATALARRLKAITDVPVLVGVGVSNAEQARQACVVADGVIQGASVVRRLMDGGPEAVGEYVSEVRAAI 255          
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A7X9KGV3_9ACTN (Tryptophan synthase alpha chain n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KGV3_9ACTN)

HSP 1 Score: 390 bits (1002), Expect = 2.830e-135
Identity = 206/254 (81.10%), Postives = 222/254 (87.40%), Query Frame = 1
Query:    1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAID 762
            FG +ET+ RAKR+AGRKLLVPYITGG  GW DAVRAAAA GADAIEIGIPFSDPVMDGP+IQQASQ AL++GA PVSIL +AR LDV IPLAVMTYYNTVHHAGH RFA QL  AGIVAAIVPDLPLEE+G WC+AADA+GIETVMLAAPTAPDERLPRV ARARGFVYSVGLLGVTGER  LA TA ALA RLKAITDVP+LVGVGVSNA QA EA  VADGVV GASV+RR+L+ G DAVGE+V  VR AI+
Sbjct:    3 FGAMETDFRAKRAAGRKLLVPYITGGLAGWQDAVRAAAAAGADAIEIGIPFSDPVMDGPIIQQASQAALESGATPVSILHDARSLDVSIPLAVMTYYNTVHHAGHARFAAQLADAGIVAAIVPDLPLEEAGPWCEAADAAGIETVMLAAPTAPDERLPRVVARARGFVYSVGLLGVTGERDVLAHTAAALARRLKAITDVPVLVGVGVSNAAQAREACEVADGVVMGASVVRRLLEGGADAVGEFVGDVRHAIE 256          
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A6L6D6C6_9ACTN (Tryptophan synthase alpha chain n=6 Tax=root TaxID=1 RepID=A0A6L6D6C6_9ACTN)

HSP 1 Score: 387 bits (995), Expect = 4.220e-134
Identity = 201/254 (79.13%), Postives = 221/254 (87.01%), Query Frame = 1
Query:    1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAID 762
             G LE+ELRAKR AGRKLLVPYITGG  GW DA+RAAAANGADAIEIGIPFSDPVMDGP+IQ ASQ+ALDAGA P+SIL + R +DV IPLAVM YYNT+H+AGH RFA  L  AG+ AAIVPDLPLEESG WC AADA+GIETVMLAAPTAPDERLPR+  R RGFVY+VGLLGVTGER +LA+TA  LA RLK +T +PIL+GVGVSNAEQAAEAV VADGVVQGASVMRR+L+ GPDAVGEYVA VRAAID
Sbjct:    4 LGFLESELRAKRDAGRKLLVPYITGGLDGWLDAIRAAAANGADAIEIGIPFSDPVMDGPIIQLASQKALDAGATPMSILNDLRQVDVSIPLAVMCYYNTIHNAGHERFANALAEAGVCAAIVPDLPLEESGPWCKAADAAGIETVMLAAPTAPDERLPRILERVRGFVYAVGLLGVTGERDELASTALLLARRLKQLTSIPILIGVGVSNAEQAAEAVSVADGVVQGASVMRRLLEGGPDAVGEYVAEVRAAID 257          
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A6C7EFJ4_ILUCY (Tryptophan synthase alpha chain n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7EFJ4_ILUCY)

HSP 1 Score: 385 bits (989), Expect = 2.600e-133
Identity = 198/254 (77.95%), Postives = 222/254 (87.40%), Query Frame = 1
Query:    1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAID 762
             G ++ E RAKR+AGRKLLVPYITGG+PGW DA+RA AANGADA+EIGIPFSDPVMDGPVIQ ASQ AL+AG  P S+L+E  +LDV IPLAVMTYYN VHH G  RFA  L  AGI  AI+PDLPLEESG WC+AADA+GIET+MLAAPTAPDERLP VAARARGF+YSVGLLGVTGERA LA TATALAARLKAITDVP+LVGVGVSNAEQA +A RVADGV+QGAS++RR+++ GPDAVG+YVA VRAAID
Sbjct:    1 MGRIDEEFRAKRAAGRKLLVPYITGGYPGWQDAIRACAANGADAVEIGIPFSDPVMDGPVIQAASQAALEAGVTPTSVLDEVPNLDVDIPLAVMTYYNLVHHPGPERFAANLARAGISGAILPDLPLEESGPWCEAADANGIETIMLAAPTAPDERLPLVAARARGFLYSVGLLGVTGERASLADTATALAARLKAITDVPVLVGVGVSNAEQAHQATRVADGVIQGASMVRRLMESGPDAVGDYVAEVRAAID 254          
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: UPI000345746A (tryptophan synthase subunit alpha n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI000345746A)

HSP 1 Score: 384 bits (985), Expect = 1.400e-132
Identity = 197/255 (77.25%), Postives = 223/255 (87.45%), Query Frame = 1
Query:    1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAIDG 765
            FG +E+E RAKR+AGRKLLVPYITGG+PGW DA+RA AANGADAIEIGIPFSDPVMDGPVIQQASQ ALD G  P +IL+E  +LDV IPL VMTYYN VHH G  RFA  L+ AGIV AI+PDLPLEESG WC AADA GIET+MLAAPTAPD+RLP+VAAR+RGF+YSVGLLGVTGER+ LA TAT LAARLK +T+VP+LVGVGVSNAEQA EA RVADGV+QGAS++RR+++ GPDAVG+YVA VRAAIDG
Sbjct:    5 FGRIESEFRAKRAAGRKLLVPYITGGYPGWQDAIRACAANGADAIEIGIPFSDPVMDGPVIQQASQAALDDGITPNAILDEVPNLDVEIPLTVMTYYNLVHHPGPERFAASLQRAGIVGAILPDLPLEESGPWCAAADAHGIETIMLAAPTAPDDRLPKVAARSRGFLYSVGLLGVTGERSSLAQTATDLAARLKLVTEVPVLVGVGVSNAEQAYEATRVADGVIQGASMVRRLMESGPDAVGDYVAEVRAAIDG 259          
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A4P5RX73_9ACTN (Tryptophan synthase alpha chain n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5RX73_9ACTN)

HSP 1 Score: 383 bits (983), Expect = 2.210e-132
Identity = 195/253 (77.08%), Postives = 222/253 (87.75%), Query Frame = 1
Query:    1 FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAI 759
            +G LET+LR +R AG K LVPYITGG+PGW DA+RA AANGADAIEIG+PFSDPVMDGP+IQQASQ+AL AGA P+SIL+E R LDVGIPLAVM YYNTV HAGH RFA  L  +G+  AI+PDLPLEESG WC+AADA+G+ETVMLAAPTAPD+RLPRV ARARGFVYSVGLLGVTGERA L  TAT LA RLKAIT+VP+LVGVGVSNA+QAA+AV+VADGV+QGASVMRR+++ G DAVGEY+A VR AI
Sbjct:    3 YGRLETQLRQRREAGGKSLVPYITGGYPGWQDAIRACAANGADAIEIGLPFSDPVMDGPIIQQASQKALQAGATPISILQEVRSLDVGIPLAVMCYYNTVFHAGHERFAFALADSGVSGAIIPDLPLEESGPWCEAADAAGVETVMLAAPTAPDDRLPRVVARARGFVYSVGLLGVTGERAALELTATDLARRLKAITEVPVLVGVGVSNAQQAAQAVQVADGVIQGASVMRRLIESGADAVGEYIAEVRRAI 255          
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Match: A0A848UKD8_9ACTN (Tryptophan synthase alpha chain n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UKD8_9ACTN)

HSP 1 Score: 381 bits (979), Expect = 8.670e-132
Identity = 195/253 (77.08%), Postives = 219/253 (86.56%), Query Frame = 1
Query:    4 GVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIPFSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTVHHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAPTAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDVPILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVRAAID 762
            G +E E R KR AGRKLLVPY+TGG+PGW DA+RAAAANGADA+EIG+PFSDPVMDGPVIQ+ASQ ALDAGA P S+L+E   LDV IPL VMTYYN VHH GH RFA +L  AG+   I+PDLPLEES  WC AAD  G+ET+MLAAPTAPDERLP VAARARGF+YSVGLLGVTGER+ LAATATALA RLKAITD+P+LVGVGVSNAEQAAEA RVADGV+QGAS++RR++ +GPDAVGEYVA VRAAID
Sbjct:    3 GRIEAEFRNKREAGRKLLVPYLTGGYPGWQDAIRAAAANGADAVEIGVPFSDPVMDGPVIQEASQAALDAGATPASVLDEVPALDVEIPLLVMTYYNLVHHDGHRRFAHRLVQAGVSGCILPDLPLEESEPWCRAADQEGVETIMLAAPTAPDERLPLVAARARGFLYSVGLLGVTGERSSLAATATALAGRLKAITDLPVLVGVGVSNAEQAAEACRVADGVIQGASMVRRLMAEGPDAVGEYVAEVRAAID 255          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9957.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1B4U9_9ACTN1.080e-14083.53Tryptophan synthase alpha chain n=2 Tax=root TaxID... [more]
A0A539DQF8_9ACTN3.190e-14084.58Tryptophan synthase (Fragment) n=1 Tax=Acidimicrob... [more]
A0A6J6QML2_9ZZZZ2.710e-13980.31Tryptophan synthase n=3 Tax=root TaxID=1 RepID=A0A... [more]
A0A6I3WNB0_9ACTN8.500e-13781.42Tryptophan synthase alpha chain n=4 Tax=root TaxID... [more]
A0A7X9KGV3_9ACTN2.830e-13581.10Tryptophan synthase alpha chain n=2 Tax=Actinobact... [more]
A0A6L6D6C6_9ACTN4.220e-13479.13Tryptophan synthase alpha chain n=6 Tax=root TaxID... [more]
A0A6C7EFJ4_ILUCY2.600e-13377.95Tryptophan synthase alpha chain n=1 Tax=Ilumatobac... [more]
UPI000345746A1.400e-13277.25tryptophan synthase subunit alpha n=1 Tax=Ilumatob... [more]
A0A4P5RX73_9ACTN2.210e-13277.08Tryptophan synthase alpha chain n=1 Tax=Actinomyce... [more]
A0A848UKD8_9ACTN8.670e-13277.08Tryptophan synthase alpha chain n=1 Tax=Ilumatobac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9957contigP-wetherbeei_contig9957:40..807 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1313172.YM304_24320
Preferred nametrpA
PFAMsTrp_syntA
Model size768
Max annot lvl84992|Acidimicrobiia
KEGG rclassRC00209,RC00210,RC00700,RC00701,RC02868
KEGG koko:K01695
KEGG ReactionR00674,R02340,R02722
KEGG Pathwayko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230
KEGG ModuleM00023
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.27e-134
EggNOG OGsCOG0159@1|root,COG0159@2|Bacteria,2GN6T@201174|Actinobacteria,4CMZW@84992|Acidimicrobiia
Ec32 ortholog descriptionTryptophan synthase (alpha / beta chains)
Ec32 orthologEc-24_002360.1
EC4.2.1.20
DescriptionThe alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
Cds size768
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187118.732835-CDS-P-wetherbeei_contig9957:39..8071683187118.732835-CDS-P-wetherbeei_contig9957:39..807Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9957 40..807 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9957.1.1prot_P-wetherbeei_contig9957.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9957 40..807 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9957.1.1

>prot_P-wetherbeei_contig9957.1.1 ID=prot_P-wetherbeei_contig9957.1.1|Name=mRNA_P-wetherbeei_contig9957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp
FGVLETELRAKRSAGRKLLVPYITGGFPGWADAVRAAAANGADAIEIGIP
FSDPVMDGPVIQQASQEALDAGANPVSILEEARDLDVGIPLAVMTYYNTV
HHAGHLRFAEQLRAAGIVAAIVPDLPLEESGEWCDAADASGIETVMLAAP
TAPDERLPRVAARARGFVYSVGLLGVTGERAQLAATATALAARLKAITDV
PILVGVGVSNAEQAAEAVRVADGVVQGASVMRRMLDDGPDAVGEYVAAVR
AAIDG*
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mRNA from alignment at P-wetherbeei_contig9957:40..807+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9957.1.1 ID=mRNA_P-wetherbeei_contig9957.1.1|Name=mRNA_P-wetherbeei_contig9957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig9957:40..807+ (Phaeothamnion wetherbeei SAG_119_79)
TTCGGCGTGTTGGAGACCGAGCTGCGCGCCAAGCGCTCTGCCGGACGCAA GCTGCTCGTGCCGTACATCACCGGTGGCTTCCCCGGTTGGGCCGACGCAG TGCGTGCTGCAGCGGCCAACGGCGCGGATGCGATCGAGATCGGAATCCCG TTCAGCGATCCGGTCATGGACGGCCCGGTCATCCAGCAGGCGTCGCAGGA GGCGCTCGACGCCGGGGCCAATCCGGTGTCGATCCTCGAAGAGGCCCGGG ATCTCGACGTCGGCATCCCGCTGGCAGTGATGACGTACTACAACACCGTG CACCACGCCGGGCACCTGCGCTTCGCCGAGCAGCTGCGTGCCGCCGGCAT CGTCGCCGCCATCGTGCCCGACCTCCCGCTCGAGGAGTCCGGCGAGTGGT GCGACGCCGCCGATGCGTCCGGCATCGAGACGGTGATGCTCGCCGCTCCC ACCGCCCCCGACGAGCGGCTGCCGCGCGTTGCGGCGCGCGCCCGCGGGTT CGTGTACTCGGTCGGTCTGCTCGGTGTCACGGGTGAGCGAGCGCAGCTGG CGGCCACTGCCACGGCGCTGGCCGCTCGACTGAAGGCGATCACCGATGTG CCGATCCTCGTCGGCGTCGGCGTCTCCAACGCCGAGCAGGCGGCCGAAGC CGTGCGCGTCGCCGATGGTGTCGTGCAGGGCGCATCGGTGATGCGACGGA TGCTCGACGACGGTCCGGATGCGGTGGGGGAGTACGTCGCCGCCGTCCGA GCTGCGATCGACGGATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9957:40..807+

>mRNA_P-wetherbeei_contig9957.1.1 ID=mRNA_P-wetherbeei_contig9957.1.1|Name=mRNA_P-wetherbeei_contig9957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig9957:40..807+ (Phaeothamnion wetherbeei SAG_119_79)
TTCGGCGTGTTGGAGACCGAGCTGCGCGCCAAGCGCTCTGCCGGACGCAA
GCTGCTCGTGCCGTACATCACCGGTGGCTTCCCCGGTTGGGCCGACGCAG
TGCGTGCTGCAGCGGCCAACGGCGCGGATGCGATCGAGATCGGAATCCCG
TTCAGCGATCCGGTCATGGACGGCCCGGTCATCCAGCAGGCGTCGCAGGA
GGCGCTCGACGCCGGGGCCAATCCGGTGTCGATCCTCGAAGAGGCCCGGG
ATCTCGACGTCGGCATCCCGCTGGCAGTGATGACGTACTACAACACCGTG
CACCACGCCGGGCACCTGCGCTTCGCCGAGCAGCTGCGTGCCGCCGGCAT
CGTCGCCGCCATCGTGCCCGACCTCCCGCTCGAGGAGTCCGGCGAGTGGT
GCGACGCCGCCGATGCGTCCGGCATCGAGACGGTGATGCTCGCCGCTCCC
ACCGCCCCCGACGAGCGGCTGCCGCGCGTTGCGGCGCGCGCCCGCGGGTT
CGTGTACTCGGTCGGTCTGCTCGGTGTCACGGGTGAGCGAGCGCAGCTGG
CGGCCACTGCCACGGCGCTGGCCGCTCGACTGAAGGCGATCACCGATGTG
CCGATCCTCGTCGGCGTCGGCGTCTCCAACGCCGAGCAGGCGGCCGAAGC
CGTGCGCGTCGCCGATGGTGTCGTGCAGGGCGCATCGGTGATGCGACGGA
TGCTCGACGACGGTCCGGATGCGGTGGGGGAGTACGTCGCCGCCGTCCGA
GCTGCGATCGACGGATGA
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