mRNA_P-wetherbeei_contig9952.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9952.1.1 vs. uniprot
Match: A0A835YNC6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC6_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.650e-22 Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = 3 Query: 207 MEPEFSSRAFLKLAIDGKEQG----------TIMIGLSSLCII*CKQLYGTAVPKTVENFERLCTG-TDAGDSYRGTTFYRVVRGLNLQAGGIG--SDTGTSGRSATGTPFGPESFNVK 524 +EPE +SRA ++L++DGK G TI+IGL YG VP+TV NFE L G TD G SY+GTTFY+VV+GLN+QAG +G S G +G SA PFGPE+F V+ Sbjct: 1 VEPEVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGL-----------YGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAVGDFSGKGLTGLSAKKEPFGPENFEVR 108
BLAST of mRNA_P-wetherbeei_contig9952.1.1 vs. uniprot
Match: A0A7S2H9L4_9STRA (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H9L4_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.100e-17 Identity = 50/141 (35.46%), Postives = 82/141 (58.16%), Query Frame = 3 Query: 117 RRELLD-TLAKSMLAVGAVAVNKPREAVAVGMEPE-----FSSRAFLKLAIDGKEQGTIMIGLSSLCII*CKQLYGTAVPKTVENFERLCTGTDAGDSYRGTTFYRVVRGLNLQAGGIGSDTGTSGRSATGTPFGPESFNV 521 RR +++ T++ ++L +G + P ++A ++P + R +L + I KE G ++IGL +G +PKTVENFE+LC+ +SY GTTFYRV+ +Q G IG +G +G+SA G+PF P++F + Sbjct: 49 RRSVIESTISSAILVLG----SNPAPSIAAYIDPNTDLPVVTKRVYLDVQIGDKEPGRLVIGL-----------FGELMPKTVENFEQLCSS----NSYAGTTFYRVLSDFTIQGGAIGDSSGKTGKSAFGSPFEPDNFRL 170
BLAST of mRNA_P-wetherbeei_contig9952.1.1 vs. uniprot
Match: A0A7S4MQY5_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MQY5_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 9.460e-16 Identity = 44/104 (42.31%), Postives = 59/104 (56.73%), Query Frame = 3 Query: 213 PEFSSRAFLKLAIDGKEQGTIMIGLSSLCII*CKQLYGTAVPKTVENFERLCTGTDAGDSYRGTTFYRVVRGLNLQAGGIGSDTGTSGRSATGTPFGPESFNVK 524 P + R FL + I +E G I+IGL YG +PKT ENFE+LC G +SY GTTFYR + + G I +G SG+SA G PF P+++N+K Sbjct: 115 PTITKRVFLDVKIGDEEPGRIVIGL-----------YGELMPKTSENFEKLCEG----NSYGGTTFYRALSEFQISGGAIDDPSGNSGKSAFGAPFEPDNYNLK 203
BLAST of mRNA_P-wetherbeei_contig9952.1.1 vs. uniprot
Match: D7G0Y5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Y5_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 1.040e-15 Identity = 69/180 (38.33%), Postives = 91/180 (50.56%), Query Frame = 3 Query: 24 HDAMMRALPLPLVLLFAVCCHGFVLMFSSTP--RRELLDTLAKSM-LAVG---AVAVNKPREA-----VAVG-MEPEFSSRAFLKLAIDGKEQGTIMIGLSSLCII*CKQLYGTAVPKTVENFERLCTGTDA-GDSYRGTTFYRVVRGLNLQAGGIGSDTGTSGRSATGTPFGPESFNVK 524 HD + RA P P SS+P R+ L A ++ L VG AVA N+ E +A G EPE + RAF+ + I G ++I L YG VP TV+NF L TG +A G SY+GT YRV+ GLN+Q G IGS +G SG S+TG E+F++K Sbjct: 36 HDGVERAQPAP----------------SSSPLSRQAFLGGAAAAIPLVVGVGRAVADNEIIEKMVADKIAAGWQEPEVTQRAFMDITIGDSPSGRLVINL-----------YGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGKSGVSSTGENIPQENFDIK 188
BLAST of mRNA_P-wetherbeei_contig9952.1.1 vs. uniprot
Match: A0A6V2NXR4_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NXR4_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.230e-15 Identity = 48/140 (34.29%), Postives = 75/140 (53.57%), Query Frame = 3 Query: 117 RRELLDTLAKSMLAVGAVAVNKPREAVAVGMEPE-----FSSRAFLKLAIDGKEQGTIMIGLSSLCII*CKQLYGTAVPKTVENFERLCTGTDAGDSYRGTTFYRVVRGLNLQAGGIGSDTGTSGRSATGTPFGPESFNV 521 R + T++ +ML +G P + A ++P + R +L + I KE G + IGL +G +PKTV+NFE+LC+ +SY GTTFYRV+ +Q G IG TG +G+SA G+ F P+++ + Sbjct: 33 RNAIQTTISSAMLVLG----GNPAPSAAAYLDPNTDPPVVTKRVYLDVQIGDKEPGRLTIGL-----------FGELMPKTVDNFEQLCST----NSYAGTTFYRVLSDFTIQGGAIGDPTGKTGKSAFGSSFEPDNYRL 153
BLAST of mRNA_P-wetherbeei_contig9952.1.1 vs. uniprot
Match: A0A448Z361_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z361_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 3.950e-15 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 204 GMEPEFSSRAFLKLAIDGKEQGTIMIGLSSLCII*CKQLYGTAVPKTVENFERLCTGTDAGDSYRGTTFYRVVRGLNLQAGGIGSDTGTSGRSATGTPFGPESFNV 521 G + E + + L IDG + G + +GL YG+ VPKTVENF++LC T GD Y+G++F+R++ G Q G + GT G+S G F E+F++ Sbjct: 55 GTDAEITDTVYFDLTIDGADAGRVEMGL-----------YGSTVPKTVENFKQLCCKTKKGDGYKGSSFHRIIPGFMCQGGDFTNGNGTGGKSIYGRTFEDENFDL 149
BLAST of mRNA_P-wetherbeei_contig9952.1.1 vs. uniprot
Match: A0A7R9W6P2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6P2_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 5.320e-15 Identity = 45/104 (43.27%), Postives = 59/104 (56.73%), Query Frame = 3 Query: 213 PEFSSRAFLKLAIDGKEQGTIMIGLSSLCII*CKQLYGTAVPKTVENFERLCTGTDAGDSYRGTTFYRVVRGLNLQAGGIGSDTGTSGRSATGTPFGPESFNVK 524 P + R +L + I G ++ G L I LYG +PKT ENFERLC G + Y GTTFYRV+ L + G IG G SG+SA G+ F P++FN+K Sbjct: 16 PRVTKRVYLDVMI-GDDEAAEAEGAGRLVI----GLYGELMPKTAENFERLCEG----NGYAGTTFYRVLSDLQISGGAIGDPKGDSGKSAFGSSFEPDNFNLK 110
BLAST of mRNA_P-wetherbeei_contig9952.1.1 vs. uniprot
Match: A0A1E7FCA1_9STRA (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCA1_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.650e-14 Identity = 41/106 (38.68%), Postives = 60/106 (56.60%), Query Frame = 3 Query: 213 PEFSSRAFLKLAIDGKEQGTIMIGLSSLCII*CKQLYGTAVPKTVENFERLCTGTDAGDSYRGTTFYRVVRGLNLQAGGIGSDTGTSGRSA--TGTPFGPESFNVK 524 P+ + R +L + E+G ++IGL YG +PKT ENFE+LC A +SY GT FYRV+ +Q G IG +G +G+S+ G F P++FN+K Sbjct: 3 PKITKRVYLDVEFGKNEKGRLVIGL-----------YGDIMPKTAENFEKLC----ASNSYAGTNFYRVISDTTIQGGAIGDPSGKTGKSSFDDGKSFEPDNFNIK 93
BLAST of mRNA_P-wetherbeei_contig9952.1.1 vs. uniprot
Match: M4D517_BRARP (Peptidyl-prolyl cis-trans isomerase n=18 Tax=Brassicaceae TaxID=3700 RepID=M4D517_BRARP) HSP 1 Score: 76.3 bits (186), Expect = 8.120e-14 Identity = 52/141 (36.88%), Postives = 69/141 (48.94%), Query Frame = 3 Query: 120 RELLDTLAKSMLAVGAVAVNKPREAVAVGMEPEFSSRAFLKLAIDGKEQGTIMIGLSSLCII*CKQLYGTAVPKTVENFERLCTGTDAGDS------YRGTTFYRVVRGLNLQAGGIGSDTGTSGRSATGTPFGPESFNVK 524 R LL +A ++ + A+ E V + E + R FL + IDG+ G I+IGL YGTAVPKTVENF LCTG S Y+GT F+R++ G +Q G I G S G F E+F +K Sbjct: 12 RCLLLLVALTIFLIFALFNTGKEEEKQVIQDFEITHRVFLDVDIDGQRLGRIVIGL-----------YGTAVPKTVENFRALCTGEKGKSSSGKPLHYKGTPFHRIISGFVIQGGDIIHGDGKGSESIYGGTFPDENFKIK 141
BLAST of mRNA_P-wetherbeei_contig9952.1.1 vs. uniprot
Match: A8BC67_GIAIC (Peptidyl-prolyl cis-trans isomerase n=6 Tax=Giardia intestinalis TaxID=5741 RepID=A8BC67_GIAIC) HSP 1 Score: 73.9 bits (180), Expect = 2.110e-13 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 207 MEPEFSSRAFLKLAIDGKEQGTIMIGLSSLCII*CKQLYGTAVPKTVENFERLCTGTDAGDSYRGTTFYRVVRGLNLQAGGIGSDTGTSGRSATGTPFGPESFNVK 524 M S + F + I GK G I +GL +G+ VPKT ENF++LCTG + G Y+G+TF+RV+ +Q G + GT G+S G F E+F +K Sbjct: 1 MNSPVSDKVFFDITIGGKPLGRITMGL-----------FGSIVPKTAENFKKLCTG-EMGFGYKGSTFHRVIPKFMIQGGDFTNHNGTGGKSIYGAKFPDENFEIK 94 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9952.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9952.1.1 >prot_P-wetherbeei_contig9952.1.1 ID=prot_P-wetherbeei_contig9952.1.1|Name=mRNA_P-wetherbeei_contig9952.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=92bp MMRALPLPLVLLFAVCCHGFVLMFSSTPRRELLDTLAKSMLAVGAVAVNKback to top mRNA from alignment at P-wetherbeei_contig9952:57..664- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9952.1.1 ID=mRNA_P-wetherbeei_contig9952.1.1|Name=mRNA_P-wetherbeei_contig9952.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=608bp|location=Sequence derived from alignment at P-wetherbeei_contig9952:57..664- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9952:57..664- >mRNA_P-wetherbeei_contig9952.1.1 ID=mRNA_P-wetherbeei_contig9952.1.1|Name=mRNA_P-wetherbeei_contig9952.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=276bp|location=Sequence derived from alignment at P-wetherbeei_contig9952:57..664- (Phaeothamnion wetherbeei SAG_119_79)back to top |