mRNA_P-wetherbeei_contig994.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig994.1.1 vs. uniprot
Match: D7G9J6_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9J6_ECTSI) HSP 1 Score: 181 bits (460), Expect = 2.030e-51 Identity = 90/140 (64.29%), Postives = 109/140 (77.86%), Query Frame = 2 Query: 611 FIQDSYKEAVAQASREMKFLVVYLHSPLHEDTPTFCKDVLCSETMVEFLDSNFLVWGGSTWHAEAFAVGNMLGATTFPSTALLLCKPNEVQVVERVPGAVGTEPLMERLSGAMARFQEQLERVRRQMYEREEGSRLRREQ 1030 F+ +SY+EAV +A+R+ KFL+VYLHSPLH+DTP FC+ LCSE MV+F++ N LVWGGS H EA+AVGN L A FP LLLCK N+VQVVERV GA TE L++RL+ AMARFQEQL+R+ RQ EREE RLR EQ Sbjct: 2 FLAESYREAVQEAARQHKFLMVYLHSPLHQDTPHFCRSTLCSEPMVDFMEHNVLVWGGSLMHGEAYAVGNALDACAFPYVGLLLCKQNQVQVVERVEGAENTEALLDRLTSAMARFQEQLDRIHRQQREREEARRLREEQ 141
BLAST of mRNA_P-wetherbeei_contig994.1.1 vs. uniprot
Match: A0A835ZEV9_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV9_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.130e-48 Identity = 109/265 (41.13%), Postives = 137/265 (51.70%), Query Frame = 2 Query: 413 SGNAPQGWIGWVVSLPFRVVFWALGLAFRPLASILGIEDAPRDGEAAARRFVSKFEMEYGR------------------ECR-PRFIQDSYKEAVAQASREMK-------------------------------------------------------FLVVYLHSPLHEDTPTFCKDVLCSETMVEFLDSNFLVWGGSTWHAEAFAVGNMLGATTFPSTALLLCKPNEVQVVERVPGAVGTEPLMERLSGAMARFQEQLERVRR 985 S G + +V P AL +A RP++ +LG E+AP+DGEAAARRF++ FE +YGR R PRF DSY++AVA A+ E K FL+VYLHSPLHEDTP FCK L SETM EF+ NFL WGGS WHA+A++V N LGA T+P ALLLC P++VQV+ER G + E ++ER AMARFQ+QL+R RR Sbjct: 58 SAQRAPGALSTIVGFPLWAAAKALSIALRPVSYVLGAEEAPKDGEAAARRFIAAFEAQYGRGGGXXXXXXXXXXXXXXXAARVPRFFPDSYRQAVAAAAVERKNAWRVLQSHRFPCRKQQSRSHASPGGALPSLSAAAIRSRRSAPLPLLPCVPSPPQFLLVYLHSPLHEDTPDFCK-TLTSETMAEFMAQNFLAWGGSVWHADAYSVSNQLGACTYPFMALLLCSPDQVQVMERFEGKLSCEAILERAGAAMARFQDQLDRARR 321
BLAST of mRNA_P-wetherbeei_contig994.1.1 vs. uniprot
Match: A0A7S3MDT0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDT0_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.630e-29 Identity = 98/322 (30.43%), Postives = 153/322 (47.52%), Query Frame = 2 Query: 44 SGGQATMANEEAREQAIRTFREFTHTDDAEQAARLLEWHEWQVDAAVSAFMLGNVEPPASYFARRA-GNVGGASGRGIHADPAMEDAGIDAGANETDALLAGGGGAGTGLSMASXGGAGNVASASGNAPQGWIGWVVSLPFRVVFWALGLAFRPLASILGIEDAPRDGEAAARRFVSKFEMEYGRECRPRFIQDSYKEAVAQASREMKFLVVYLHSPLHEDTPTFCKDVLCSETMVEFLDSNFLVWGGSTWHAEAFAVGNMLGATTFPSTALLLCKPNE-VQVVERVPGAVGTEPLMERLSGAMARF-----QEQLERVRRQ 988 +GG +E RE +++F+E +D ++L+ + W ++ A+S FM E A + R+ GNV + R + A + A + AN+ + A+ AP G G ++ +P R +F A ++ P +D E RF+ + + P F SY+ AVA A KFL+VYLHSPLHEDTP FC+ VL + +V + + N + W G W EA+ + L ATTFP ALL+C+ + VQ+ +R+ G V L+ER+ ++ F Q QLE+ RR+ Sbjct: 4 TGGSILQLSESQRE-TLQSFQEIASINDEYLCMQILQQNSWDLNLALSQFMGQGTEEAAPVPSSRSDGNVVRRANRNVDASSGSQRATLSV-ANQAE----------------------RERPAADTAPNGLFG-LLFIPIRWLFQARPISLNP----------NQDTE----RFIDDYNLRVS-PTHPNFHTGSYQSAVATAFERSKFLLVYLHSPLHEDTPRFCRGVLSAPGVVNYANENLITWAGRVWDPEAYGLSTQLRATTFPFVALLVCQSSRSVQIADRIQGYVEENVLLERIQNSVNAFNSVISQNQLEQQRRE 285
BLAST of mRNA_P-wetherbeei_contig994.1.1 vs. uniprot
Match: A0A118JUM0_CYNCS (Thioredoxin-like fold n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JUM0_CYNCS) HSP 1 Score: 122 bits (305), Expect = 1.860e-27 Identity = 77/238 (32.35%), Postives = 118/238 (49.58%), Query Frame = 2 Query: 401 VASASGNAPQGWIGWVVSLPFRVV--------------FWALGLAFRPLASILGIEDAPRDGEAA-------------ARRFVSKFEMEYGRECRPRFIQDSYKEAVAQASREMKFLVVYLHSPLHEDTPTFCKDVLCSETMVEFLDSNFLVWGGSTWHAEAFAVGNMLGATTFPSTALLLCKPNE-VQVVERVPGAVGTEPLMERLSGAMARFQEQLERVRRQMYEREEGSRLRREQ 1030 V + G P G +++LP ++ WA G ++G+ ++ R+GE++ ARRFVS FE EYG + P F+ D + EA+ Q+ E K + VYLHSP H DTP+FC+ LCSE + F++ NF+ WGGS +E F + N L A+ FP A+++ N+ + ++++V G E ++ L + L R ER RLR EQ Sbjct: 79 VINIGGGGPPGLAWKIITLPISIISGSLGXXXXXXXLGLWAAGGVLSYSLGMIGLTNSGRNGESSSAPIVSATAAASEARRFVSMFESEYG-DRHPNFVSDGFMEALQQSRHEFKLMFVYLHSPDHPDTPSFCEGTLCSEVLSAFINENFVAWGGSIRASEGFKMSNSLKASRFPFCAVVMAATNQRIALLQQVEGPKSPEEMLTVLQRVLEESSPVLVAARLDAEERRTNIRLREEQ 315
BLAST of mRNA_P-wetherbeei_contig994.1.1 vs. uniprot
Match: A0A6H5KFL2_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL2_9PHAE) HSP 1 Score: 118 bits (296), Expect = 2.250e-27 Identity = 62/96 (64.58%), Postives = 72/96 (75.00%), Query Frame = 2 Query: 743 MVEFLDSNFLVWGGSTWHAEAFAVGNMLGATTFPSTALLLCKPNEVQVVERVPGAVGTEPLMERLSGAMARFQEQLERVRRQMYEREEGSRLRREQ 1030 MV+F++ N LVWGGS H EA+AVGN L A FP LLLCK N+VQVVERV GA TE L++RL+ AMARFQEQL+R+ RQ EREE RLR EQ Sbjct: 1 MVDFMEHNVLVWGGSLMHGEAYAVGNALDACAFPYVGLLLCKQNQVQVVERVEGAENTEALLDRLTSAMARFQEQLDRIHRQQREREEARRLREEQ 96
BLAST of mRNA_P-wetherbeei_contig994.1.1 vs. uniprot
Match: A0A7S0HX59_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HX59_9CRYP) HSP 1 Score: 120 bits (301), Expect = 2.690e-27 Identity = 76/179 (42.46%), Postives = 102/179 (56.98%), Query Frame = 2 Query: 503 LASILGIEDAPRDG--EAAARRFVSKFEMEYGRECRPRFIQDSYKEAVAQASREMKFLVVYLHSPLHEDTPTFCKDVLCSETMVEFLDSNFLVWGGSTWHAEAFAVGNMLGATTFPSTALLLCK-PNEVQVVERVPGAVGTEPLMERLSGAMARFQEQLERVRRQMYEREEGSRLRREQ 1030 LAS+LG+ R G E A+RFV +F +E+G + P +++EAV A RE KFLVVYLHSP H+DTP F +D LC++ + +F+D NFL W GS +EAF V +L A+ FP A++ N+ V + G VG E LM L M QL R + ER R+R EQ Sbjct: 76 LASVLGVGSRNRAGRNETEAQRFVDRFNLEHG-DVHPTAQTGTFREAVDAAKREFKFLVVYLHSPYHQDTPEFLRDTLCTQVLKDFIDDNFLFWMGSLVDSEAFNVSMLLRASAFPYVAVITTTIDNQTTVCDAHEGLVGREDLMNWLMNIMETQGPQLVAQRVEAEERAMDRRIREEQ 253
BLAST of mRNA_P-wetherbeei_contig994.1.1 vs. uniprot
Match: W2HHW4_PHYPR (UBX domain-containing protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2HHW4_PHYPR) HSP 1 Score: 119 bits (297), Expect = 8.600e-27 Identity = 68/183 (37.16%), Postives = 101/183 (55.19%), Query Frame = 2 Query: 488 LAFRPLASILGIEDAPRDGEAAARRFVSKFEMEYGRECRPRFIQDSYKEAVAQASREMKFLVVYLHSPLHEDTPTFCKDVLCSETMVEFLDSNFLV--WGGSTWHAEAFAVGNMLGATTFPSTALLLCKPNEVQVVERVPGAVGTEPLMERLSGAMARFQEQLERVRRQMYEREEGSRLRREQ 1030 L PL+ +LG + P D +AAAR F YG + PRF S+++AV+ A KFL+V+LHS +H+D TFC+ +C+E M +L+++ + W G HAE F V LG TFP ALL C V VVE++ + + ++E+L+ A+ R + L R +R E LR +Q Sbjct: 45 LLMSPLSFVLG-DGEPEDPQAAARNFAHSLRRRYGEDVTPRFEHTSFRDAVSTARTASKFLLVFLHSNIHDDADTFCRKAMCTERMSAYLNNSDCIVSWAGCVQHAEGFGVSLSLGCATFPFLALLSCVSRGVNVVEKITANLPADEIIEKLNAAVDRNNQILATARHIRQQRTEAQILREQQ 226
BLAST of mRNA_P-wetherbeei_contig994.1.1 vs. uniprot
Match: A0A7S1HGD4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HGD4_HEMAN) HSP 1 Score: 115 bits (288), Expect = 9.850e-27 Identity = 68/159 (42.77%), Postives = 92/159 (57.86%), Query Frame = 2 Query: 557 RRFVSKFEMEYGRECRPRFIQDSYKEAVAQASREMKFLVVYLHSPLHEDTPTFCKDVLCSETMVEFLDSNFLVWGGSTWHAEAFAVGNMLGATTFPSTALLLCKP-NEVQVVERVPGAVGTEPLMERLSGAMARFQEQLERVRRQMYEREEGSRLRREQ 1030 R F+ KFE+E+G PR + +++EAV A RE++FLVVY+HSP HEDT FC VLC+E M +F+D NF+ W GS E + ML A+T+P A++ P N+ V + G+VG E M L M QL R ++ ER RLR EQ Sbjct: 15 RDFMKKFELEHG-STHPRVVAPTFREAVDAAKRELRFLVVYIHSPHHEDTAAFCSSVLCTEVMRDFVDDNFVFWMGSISLPEGYRAATMLRASTYPFLAVMTSSPDNQTTVCDAHQGSVGREDAMNWLMNIMETQGPQLVAQRAELEERAFERRLREEQ 172
BLAST of mRNA_P-wetherbeei_contig994.1.1 vs. uniprot
Match: A0A3R7GSH5_9STRA (UBX domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GSH5_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.770e-26 Identity = 69/183 (37.70%), Postives = 99/183 (54.10%), Query Frame = 2 Query: 488 LAFRPLASILGIEDAPRDGEAAARRFVSKFEMEYGRECRPRFIQDSYKEAVAQASREMKFLVVYLHSPLHEDTPTFCKDVLCSETMVEFLDSNFLV--WGGSTWHAEAFAVGNMLGATTFPSTALLLCKPNEVQVVERVPGAVGTEPLMERLSGAMARFQEQLERVRRQMYEREEGSRLRREQ 1030 L PL+ +LG + P D +AAAR F YG E PRF S+++AV+ A KFL+V+LHS +H+D TFC+ +C+E M +L+++ + W G HAE F V LG TFP ALL C V VVE++ + ++E+L A+ R + L R +R E LR +Q Sbjct: 53 LLMSPLSFVLG-DGEPEDPQAAARNFTHSLRRRYGEELTPRFEHTSFRDAVSTARTASKFLLVFLHSNIHDDANTFCRKAMCTEQMSAYLNNSDCIVSWAGCVQHAEGFGVSLSLGCATFPFLALLSCVSRGVNVVEKITANLPAREIIEKLDVAVDRNNQILTAARHVRQQRTEAQLLREQQ 234
BLAST of mRNA_P-wetherbeei_contig994.1.1 vs. uniprot
Match: A0A7I8L272_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L272_SPIIN) HSP 1 Score: 119 bits (297), Expect = 2.480e-26 Identity = 97/346 (28.03%), Postives = 146/346 (42.20%), Query Frame = 2 Query: 83 EQAIRTFREFTHTDDAEQAARLLEWHEWQVDAAVSAFMLGNVEPPASYFARRAGNVGGASGRGIHADPAMEDAGIDAGANETDALLAGGGGAGTGLSMASXGGAGNVASASGNAPQGWIGW-VVSLPFRVVF--------------WALGLAFRPLASILGIEDAPRDGE------------AAARRFVSKFEMEYGRE--CRPRFIQDSYKEAVAQASREMKFLVVYLHSPLHEDTPTFCKDVLCSETMVEFLDSNFLVWGGSTWHAEAFAVGNMLGATTFPSTALLLCKPNE-VQVVERVPGAVGTEPLMERLSGAMARFQEQLERVRRQMYEREEGSRLRREQ 1030 E + TF+ T +D + A +L H+W +D AVS+F Y A R+ + G +D +V G A G I W +V+LPF VV W G +LG+ + G+ A A FV+ FEME+G RP F+++ + +A+ ++ RE K L VYLHSP H D P FC LCS+ + EF+++NF+ WGGS +E F + N L A+ FP A+++ N+ + +++++ G E L+ L L R + ER RLR EQ Sbjct: 12 EDKLATFQAITGLEDPDLCAEILAAHDWDLDLAVSSFTSAFSPSVPGYAAERSPGPSNGASSGSQSDQ-------------------------------------DVVQVRGAAHPG-IAWRLVTLPFYVVSGGVGLISGAVGVGAWVAGSVISRSLGLLGLLPSRSSGDGSSLIPPVSAEAAEAAEFVAIFEMEFGGAGASRPNFVEEGFMDALQRSRREFKLLFVYLHSPDHPDVPGFCSGCLCSDVVAEFVNTNFVSWGGSVRGSEGFKMSNSLKASRFPFCAVVMAASNQRIALLQQIEGPRSPEELLRILQRVYEESSTVLITARLEAEERRNALRLREEQ 319 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig994.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig994.1.1 >prot_P-wetherbeei_contig994.1.1 ID=prot_P-wetherbeei_contig994.1.1|Name=mRNA_P-wetherbeei_contig994.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=323bp MANEEAREQAIRTFREFTHTDDAEQAARLLEWHEWQVDAAVSAFMLGNVEback to top mRNA from alignment at P-wetherbeei_contig994:7..2203- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig994.1.1 ID=mRNA_P-wetherbeei_contig994.1.1|Name=mRNA_P-wetherbeei_contig994.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2197bp|location=Sequence derived from alignment at P-wetherbeei_contig994:7..2203- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig994:7..2203- >mRNA_P-wetherbeei_contig994.1.1 ID=mRNA_P-wetherbeei_contig994.1.1|Name=mRNA_P-wetherbeei_contig994.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig994:7..2203- (Phaeothamnion wetherbeei SAG_119_79)back to top |