mRNA_P-wetherbeei_contig9934.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A346A0S6_9HYPH (ABC transporter permease n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A0S6_9HYPH) HSP 1 Score: 388 bits (996), Expect = 4.300e-134 Identity = 209/259 (80.69%), Postives = 236/259 (91.12%), Query Frame = 1 Query: 28 DDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQER 804 +RALR+ +P+ +LA+++L WDL VRGFAIPPYVLP PGLV +TL+ DA LL+QSLLVTL +T EGF+LAA+GGV AV FNQWR EY+ YPYAVILQVTP+VA+APLLLIYLPQ LAVLACAWIVAFFPVLANTTLGLNSVDHNL+ALF+LYKASRW+IL LKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLA RIAESGYRLNI RMFAAL+LL+LAGV IFFVLSA+S+V+LRRWHESA+R+ER Sbjct: 2 SERALRIGLPILVLAVLLLAWDLIVRGFAIPPYVLPGPGLVLSTLIADAGLLFQSLLVTLTLTIEGFVLAAVGGVMWAVVFNQWRAVEYSFYPYAVILQVTPIVAIAPLLLIYLPQHLAVLACAWIVAFFPVLANTTLGLNSVDHNLLALFELYKASRWEILWRLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAALVLLSLAGVVIFFVLSAVSYVVLRRWHESAIRRER 260
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A0Q7TAC8_9HYPH (ABC transporter ATP-binding protein n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TAC8_9HYPH) HSP 1 Score: 366 bits (939), Expect = 2.030e-125 Identity = 199/258 (77.13%), Postives = 224/258 (86.82%), Query Frame = 1 Query: 28 DDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801 R LR+ +P +LA+VV+ W+ VR FAIP YVLPSP LV L++D LL+ SLLVTL +TFEGF+LAA+GG+ +A+AFNQWR+ EY+ YPYAVILQVTPVVAVAPLLLIYLPQ LAVLACAWIVAFFPVLANTTLGLNSVD NL+ALF LYKASRWQ+L+ LKLPAALPQ+L GLRIAGGLSLIGAVVAEIAAGSAGAGSGLA RIAESGYRLNI RMFAALLLL+L GVAIF LSALSH++LRRWHES +R E Sbjct: 2 SGRVLRLVLPALLLAIVVVVWEATVRFFAIPAYVLPSPALVFGALIDDRALLFNSLLVTLGLTFEGFMLAAVGGIVLAMAFNQWRLIEYSFYPYAVILQVTPVVAVAPLLLIYLPQHLAVLACAWIVAFFPVLANTTLGLNSVDRNLMALFDLYKASRWQVLMRLKLPAALPQILTGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAALLLLSLVGVAIFLALSALSHLVLRRWHESELRAE 259
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: UPI0010BF3CB0 (ABC transporter permease n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI0010BF3CB0) HSP 1 Score: 365 bits (937), Expect = 4.230e-125 Identity = 196/253 (77.47%), Postives = 221/253 (87.35%), Query Frame = 1 Query: 43 RVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801 R+A+P+ +LA+ V WD AVR FAIPPY+LP PG+VA +L+ D LL+ SLLVTL + EGF LA +GG+ A FNQWR+ EY+ YPYAV+LQVTPVVA+APLLLIYLPQ LAVLACAWIVAFFPVLANTTLGL SVD NLVALFQLYKASRWQ+L+ LKLPAALPQML GLRIAGGLSLIGAVVAEIAAGSAGAGSGLA RIAESGYRLNI RMFAALLLL+LAGVAI+FVLS+LSH++LRRWHES V +E Sbjct: 8 RIALPILLLAIAVAVWDAAVRAFAIPPYILPGPGIVAESLIGDRGLLFGSLLVTLTLALEGFALAVIGGIFWATVFNQWRLVEYSFYPYAVVLQVTPVVAIAPLLLIYLPQHLAVLACAWIVAFFPVLANTTLGLRSVDRNLVALFQLYKASRWQVLMRLKLPAALPQMLTGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAALLLLSLAGVAIYFVLSSLSHLVLRRWHESEVDEE 260
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A371BAJ8_9HYPH (ABC transporter permease n=1 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371BAJ8_9HYPH) HSP 1 Score: 361 bits (927), Expect = 1.410e-123 Identity = 197/259 (76.06%), Postives = 222/259 (85.71%), Query Frame = 1 Query: 28 DDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQER 804 + +R +P+ +LA + WD+AVR FAIPPYVLP PGLVA L+ D LL+ SL+VTL + EGF LAA+GG+ AV FNQWR+ EY+ YPYAV+LQVTPVVA+APLLLIYLPQ LAVLACAWIVAFFPVLANTTLGL SVD NLVALF LYKASRWQ+L+ L LPAALPQ+LAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLA RIAESGYRLNI RMFAALLLL+LAGVAIF VLSALSH++LRRWHES V++ER Sbjct: 3 ESGLVRTVLPVLLLAGAIAAWDMAVRVFAIPPYVLPGPGLVAGALIGDRGLLFDSLVVTLTLAIEGFALAAIGGIFWAVVFNQWRVVEYSFYPYAVVLQVTPVVAIAPLLLIYLPQHLAVLACAWIVAFFPVLANTTLGLRSVDRNLVALFALYKASRWQVLVRLMLPAALPQILAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAALLLLSLAGVAIFAVLSALSHLVLRRWHESEVKEER 261
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A127F4N4_9HYPH (Nitrate/sulfonate/bicarbonate ABC transporter permease n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F4N4_9HYPH) HSP 1 Score: 349 bits (895), Expect = 1.000e-118 Identity = 190/258 (73.64%), Postives = 219/258 (84.88%), Query Frame = 1 Query: 28 DDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801 ++RAL +A P +L L V+ WDL VR IPPY+LP+PGLV +TLV+D +LW SLL TL T EG +LA GG+ +A+ FNQ R+ E++LYPYAVILQVTPVVA+APLLLIYLPQ AVLACAWIVAFFPVLANTTLGLNSVDHNL LF++Y ASRWQ+L LKLPAALPQMLAG+RIAGGLSLIGAVVAEIAAGSAGAGSGLA RIAESGYRLNI RMFAALLLL++AG+AIF +LS L+HV LRRWHESA+ +E Sbjct: 2 NERALSIAAPAGVLILSVVVWDLVVRINGIPPYILPAPGLVLSTLVSDWSILWSSLLATLTTTVEGLVLAVAGGIGLAILFNQSRLLEHSLYPYAVILQVTPVVAIAPLLLIYLPQQAAVLACAWIVAFFPVLANTTLGLNSVDHNLADLFRMYGASRWQVLWELKLPAALPQMLAGIRIAGGLSLIGAVVAEIAAGSAGAGSGLAFRIAESGYRLNIPRMFAALLLLSIAGIAIFAMLSMLNHVALRRWHESAIARE 259
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A537NX70_9PROT (ABC transporter permease n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NX70_9PROT) HSP 1 Score: 349 bits (895), Expect = 1.520e-118 Identity = 192/260 (73.85%), Postives = 221/260 (85.00%), Query Frame = 1 Query: 22 PTDDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801 P DR LRV +P+A+LAL VL W+L VR IPPYVLP+P LV +TL++D +L SLLVTL T EGFLLAA+GG+ +AV FNQ R+ EY+LYPYA+ILQVTP+VA+APLLL+YLPQP AVLACAWIVAFFPVLANTTLGLNSVDHNLV LF+LY A+R Q+L LKLPAALP +L GL+IAGGLSLIGAVVAEIAAGSAGAGSGLA RI ESGYRLNI RMFAALLLL+L G+ IFF LS LSH++LRRWHESA+ +E Sbjct: 12 PGADRTLRVLLPIAVLALGVLLWELVVRAGNIPPYVLPNPWLVFSTLISDRAVLLASLLVTLTTTLEGFLLAAIGGIGLAVLFNQSRLIEYSLYPYAIILQVTPIVAIAPLLLVYLPQPAAVLACAWIVAFFPVLANTTLGLNSVDHNLVDLFRLYGATRLQMLFDLKLPAALPYILGGLKIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIVESGYRLNIPRMFAALLLLSLVGIVIFFALSLLSHLMLRRWHESAIVRE 271
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A537STX5_9PROT (ABC transporter permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537STX5_9PROT) HSP 1 Score: 347 bits (891), Expect = 6.160e-118 Identity = 196/260 (75.38%), Postives = 219/260 (84.23%), Query Frame = 1 Query: 22 PTDDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801 P DR LRV +P+AMLAL V W+L VR IPPYVLPSP LV +TLV+D LL SLLVTL T +GFLLAA+GGV +AV FNQ R+ EY+LYPYAVILQVTP+VA+APLLLIYLPQ AVLACAWIVAFFPVLANTTLGLNSVDHNLV LF+LY A+R Q+L LKLPAA P +L GL+IAGGLSLIGAVVAEIAAGSAGAGSGLA RI ESGYRLNI RMFAALLLL+LAG+ IFF LS LSH++LRRWHESA+ +E Sbjct: 12 PVADRVLRVLLPIAMLALGVALWELVVRVGGIPPYVLPSPWLVFSTLVSDRALLSASLLVTLTTTLQGFLLAAVGGVGLAVLFNQSRLIEYSLYPYAVILQVTPIVAIAPLLLIYLPQQAAVLACAWIVAFFPVLANTTLGLNSVDHNLVDLFRLYGATRRQVLFDLKLPAAQPYILGGLKIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIVESGYRLNIPRMFAALLLLSLAGILIFFALSVLSHLMLRRWHESAIVRE 271
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A6L5FKY6_9HYPH (ABC transporter permease subunit n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FKY6_9HYPH) HSP 1 Score: 342 bits (877), Expect = 8.870e-116 Identity = 190/257 (73.93%), Postives = 217/257 (84.44%), Query Frame = 1 Query: 31 DRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801 +R R+ +P+A+L L V+ WDL VR AIPP+VLP PGLV TL+ D +LW SLLVTL T GFLLA GG+ +AV FNQ R E+ALYPYAVILQVTPVVA+APLLLIYLPQ AVLACAWIVAFFPVLANTTLGLNSVDHNLVALF+LY A R Q+L +LKLPAALPQ+L GLRIAGGLSLIGAVVAEIAAGSAGAGSGLA RIAESGYRLNI RMFAAL+LL++AG+ I+F L+ +SH++LR WHESAVR+E Sbjct: 17 ERLRRILLPVAVLVLGVVLWDLVVRINAIPPFVLPGPGLVFGTLIADWGILWASLLVTLETTVAGFLLAVAGGIGLAVLFNQSRALEHALYPYAVILQVTPVVAIAPLLLIYLPQQAAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFELYGAKRRQVLWYLKLPAALPQILGGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAALILLSVAGIIIYFALALMSHLMLRHWHESAVRRE 273
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A537VK57_9PROT (ABC transporter permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537VK57_9PROT) HSP 1 Score: 337 bits (863), Expect = 1.150e-113 Identity = 191/261 (73.18%), Postives = 217/261 (83.14%), Query Frame = 1 Query: 19 RPTDDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801 R DR LRV +P+A+LAL V+ W+L VR IPPYVLP P LV +TL++D +L SLLVTL T EGFLLAA GGV +AV FNQ R+ EY+LYPYAVILQVTP+VA+APLLLIYLPQ AVLACAWIVAFFPVLANTTLGL SVDHNL LF+LY A+R Q+L LKLPAALP +L GL+IAGGLSLIGAVVAEIAAGSAGAGSGLA RI ESGYRLNI RMFAALLLL++AG+ IFF LS +SH+LLRRWHESA+ +E Sbjct: 12 RTRVDRVLRVLLPVAVLALGVVVWELLVRIGNIPPYVLPGPHLVFSTLISDWAVLGASLLVTLTTTLEGFLLAAAGGVGLAVLFNQSRLIEYSLYPYAVILQVTPIVAIAPLLLIYLPQQAAVLACAWIVAFFPVLANTTLGLRSVDHNLADLFRLYGATRRQVLWELKLPAALPYILGGLKIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIVESGYRLNIPRMFAALLLLSVAGIVIFFALSLVSHLLLRRWHESAIVRE 272
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Match: A0A6N7H252_9HYPH (ABC transporter permease subunit n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7H252_9HYPH) HSP 1 Score: 336 bits (861), Expect = 2.400e-113 Identity = 187/261 (71.65%), Postives = 215/261 (82.38%), Query Frame = 1 Query: 19 RPTDDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVAATLVNDAPLLWQSLLVTLAITFEGFLLAALGGVAVAVAFNQWRIAEYALYPYAVILQVTPVVAVAPLLLIYLPQPLAVLACAWIVAFFPVLANTTLGLNSVDHNLVALFQLYKASRWQILLHLKLPAALPQMLAGLRIAGGLSLIGAVVAEIAAGSAGAGSGLACRIAESGYRLNISRMFAALLLLALAGVAIFFVLSALSHVLLRRWHESAVRQE 801 R + ALR+ +P+ +LAL VL WDL VR IPPYVLP PGLV TLV D LL+ SLLVTL T +GFLLA GGV +AV FNQ R+ EY+ YPYAVILQVTP+VA+APLLL++LPQ AVLACAWIVAFFPVLANTTLGLNSVDHNL LF+LY ASRWQ+L LKLPAALP +L GL+IAGGLSLIGAVVAE+AA SAGAGSGLA RIAESGYRLNI RMFAAL+LL+LAG+ I+F L+ SH+LLRRWHESA+ ++ Sbjct: 13 RNRAEAALRLLLPIVVLALGVLVWDLIVRLREIPPYVLPGPGLVFRTLVADWGLLFDSLLVTLKTTLQGFLLAVAGGVGLAVLFNQSRLIEYSFYPYAVILQVTPIVAIAPLLLVWLPQEAAVLACAWIVAFFPVLANTTLGLNSVDHNLADLFRLYGASRWQVLRRLKLPAALPYILGGLKIAGGLSLIGAVVAEMAASSAGAGSGLAYRIAESGYRLNIPRMFAALVLLSLAGIVIYFALALFSHLLLRRWHESAIARD 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9934.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9934.2.1 >prot_P-wetherbeei_contig9934.2.1 ID=prot_P-wetherbeei_contig9934.2.1|Name=mRNA_P-wetherbeei_contig9934.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp MKLPKNRPTDDRALRVAIPLAMLALVVLTWDLAVRGFAIPPYVLPSPGLVback to top mRNA from alignment at P-wetherbeei_contig9934:1334..2140+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9934.2.1 ID=mRNA_P-wetherbeei_contig9934.2.1|Name=mRNA_P-wetherbeei_contig9934.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig9934:1334..2140+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9934:1334..2140+ >mRNA_P-wetherbeei_contig9934.2.1 ID=mRNA_P-wetherbeei_contig9934.2.1|Name=mRNA_P-wetherbeei_contig9934.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig9934:1334..2140+ (Phaeothamnion wetherbeei SAG_119_79)back to top |