mRNA_P-wetherbeei_contig9933.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9933.1.1
Unique NamemRNA_P-wetherbeei_contig9933.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9933.1.1 vs. uniprot
Match: A0A523P222_9PROT (Ferrous iron transport protein A n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P222_9PROT)

HSP 1 Score: 80.1 bits (196), Expect = 2.750e-18
Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 1
Query:   10 TLASLRPGEVGVVQGFAEIDETAQRLMQMGMVEGMEVEVLRYAPAGDPIEVRVLGYALSLRVSRS 204
            +LASL+ G+ G V GF   D   QRLMQ+G++EG  V+V+R APAGDPIE+R+LGY LSLR + +
Sbjct:    3 SLASLKAGQTGTVSGFTREDIVTQRLMQLGVLEGATVDVVRRAPAGDPIEIRILGYMLSLRTAEA 67          
BLAST of mRNA_P-wetherbeei_contig9933.1.1 vs. uniprot
Match: A0A3D5DCA6_9GAMM (Ferrous iron transport protein A n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DCA6_9GAMM)

HSP 1 Score: 76.6 bits (187), Expect = 6.140e-17
Identity = 33/64 (51.56%), Postives = 50/64 (78.12%), Query Frame = 1
Query:    1 MSTTLASLRPGEVGVVQGFAEIDETAQRLMQMGMVEGMEVEVLRYAPAGDPIEVRVLGYALSLR 192
            M+  LA+L  G+   ++GF++ +   QRL+Q+G++EG  V+V+R APAGDPIE+R+LGY+LSLR
Sbjct:    1 MTQPLATLTAGQTATIRGFSQDNSVTQRLLQLGIIEGERVDVVRRAPAGDPIEIRILGYSLSLR 64          
BLAST of mRNA_P-wetherbeei_contig9933.1.1 vs. uniprot
Match: A0A1Z9UHR8_9GAMM (FeoA domain-containing protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UHR8_9GAMM)

HSP 1 Score: 75.1 bits (183), Expect = 2.430e-16
Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 1
Query:    1 MSTTLASLRPGEVGVVQGFAEIDETAQRLMQMGMVEGMEVEVLRYAPAGDPIEVRVLGYALSLR 192
            MST L+ L  G+ GVV GF   +    RLMQ+G++EG+++EV+R AP+GDPIE+ + GYALS+R
Sbjct:    1 MSTPLSELAVGQAGVVLGFKYENNMTDRLMQLGIIEGVQIEVIRVAPSGDPIELDIAGYALSMR 64          
BLAST of mRNA_P-wetherbeei_contig9933.1.1 vs. uniprot
Match: A0A2E2BC22_9GAMM (Ferrous iron transport protein A n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E2BC22_9GAMM)

HSP 1 Score: 72.8 bits (177), Expect = 1.990e-15
Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = 1
Query:    1 MSTTLASLRPGEVGVVQGFAEIDETAQRLMQMGMVEGMEVEVLRYAPAGDPIEVRVLGYALSLR 192
            MST L  L  G+ GVV GF   +    RLMQ+G++EG+E++V+R AP+GDPIE+ + GYALS+R
Sbjct:    1 MSTPLXELAVGQSGVVLGFKYENNMTXRLMQLGIIEGVEIKVIRVAPSGDPIELDIAGYALSMR 64          
BLAST of mRNA_P-wetherbeei_contig9933.1.1 vs. uniprot
Match: A0A7W1UJ76_9BACT (Ferrous iron transport protein A n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7W1UJ76_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 2.760e-15
Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 1
Query:    1 MSTTLASLRPGEVGVVQGFAEIDETAQRLMQMGMVEGMEVEVLRYAPAGDPIEVRVLGYALSLR 192
            MS TLA LRPGE G VQ  A   E  +RLM +G++ G  +EV+R AP GDP+EVR+ G+ L+LR
Sbjct:    1 MSRTLAQLRPGERGRVQAIAGDHEATRRLMDLGLIRGTTLEVIRVAPLGDPLEVRLRGFMLTLR 64          
BLAST of mRNA_P-wetherbeei_contig9933.1.1 vs. uniprot
Match: A0A7X4ZDW3_9CLOT (Ferrous iron transport protein A n=2 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X4ZDW3_9CLOT)

HSP 1 Score: 68.2 bits (165), Expect = 1.240e-13
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 1
Query:   10 TLASLRPGEVGVVQGFAEIDETAQRLMQMGMVEGMEVEVLRYAPAGDPIEVRVLGYALSLR 192
            TL  L+PG+ G+V+  A +    +R+M MG+  G+EV+V++ AP GDPIEV V GY LSLR
Sbjct:    2 TLKDLKPGQEGIVKSIATVGAMKRRIMDMGITPGVEVKVIKAAPLGDPIEVHVRGYELSLR 62          
BLAST of mRNA_P-wetherbeei_contig9933.1.1 vs. uniprot
Match: A0A1M5V4A3_9CLOT (Ferrous iron transport protein A n=1 Tax=Clostridium grantii DSM 8605 TaxID=1121316 RepID=A0A1M5V4A3_9CLOT)

HSP 1 Score: 68.2 bits (165), Expect = 1.300e-13
Identity = 30/68 (44.12%), Postives = 46/68 (67.65%), Query Frame = 1
Query:    1 MSTTLASLRPGEVGVVQGFAEIDETAQRLMQMGMVEGMEVEVLRYAPAGDPIEVRVLGYALSLRVSRS 204
            M  TL  L+PG+ G+++    + +  +RLM+MG+ +G EV + + AP GDPIE++V GY LSLR S +
Sbjct:    1 MERTLEQLKPGDRGIIKSIGGLGKVRRRLMEMGVTKGTEVNIEKVAPLGDPIEIKVKGYNLSLRKSEA 68          
BLAST of mRNA_P-wetherbeei_contig9933.1.1 vs. uniprot
Match: A0A6L7YSA7_9BACT (Ferrous iron transport protein A n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A6L7YSA7_9BACT)

HSP 1 Score: 68.2 bits (165), Expect = 1.340e-13
Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 1
Query:   10 TLASLRPGEVGVVQGFAEIDETAQRLMQMGMVEGMEVEVLRYAPAGDPIEVRVLGYALSLR 192
            TL  LRPGE G + GF E D    RLM+MGM+ G EV+V+R AP GDP++++V GY LS+R
Sbjct:    2 TLQDLRPGESGRILGF-EPDAVMDRLMEMGMLPGSEVQVVRLAPLGDPMDLKVRGYHLSIR 61          
BLAST of mRNA_P-wetherbeei_contig9933.1.1 vs. uniprot
Match: A0A0S8BZ27_9DELT (FeoA domain-containing protein n=1 Tax=Myxococcales bacterium SG8_38 TaxID=1703407 RepID=A0A0S8BZ27_9DELT)

HSP 1 Score: 68.2 bits (165), Expect = 1.440e-13
Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 1
Query:    1 MSTTLASLRPGEVGVVQGFAEIDETAQRLMQMGMVEGMEVEVLRYAPAGDPIEVRVLGYALSLR 192
            M+ +LA LRPG+ G +         A+RLM+MG++ G EV V+R AP GDP+E+RV GYALS+R
Sbjct:    1 MTPSLADLRPGQTGEIVSIDCDRPIARRLMEMGLLPGTEVRVIRLAPLGDPLELRVRGYALSVR 64          
BLAST of mRNA_P-wetherbeei_contig9933.1.1 vs. uniprot
Match: A0A1H9YW34_9FIRM (Ferrous iron transport protein A n=1 Tax=[Clostridium] polysaccharolyticum TaxID=29364 RepID=A0A1H9YW34_9FIRM)

HSP 1 Score: 67.8 bits (164), Expect = 1.760e-13
Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 1
Query:   10 TLASLRPGEVGVVQGFAEIDETAQRLMQMGMVEGMEVEVLRYAPAGDPIEVRVLGYALSLRVSRSR 207
            TL  L+PG+ G+V    E   T +R+M MG+  G+ ++V++ AP GDP+EV V GY LSLR + +R
Sbjct:    2 TLEDLKPGQEGIVASLGEKGATRRRIMDMGITPGVSIKVIKIAPLGDPVEVNVRGYELSLRKAEAR 67          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9933.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A523P222_9PROT2.750e-1856.92Ferrous iron transport protein A n=1 Tax=Proteobac... [more]
A0A3D5DCA6_9GAMM6.140e-1751.56Ferrous iron transport protein A n=1 Tax=Gammaprot... [more]
A0A1Z9UHR8_9GAMM2.430e-1653.13FeoA domain-containing protein n=2 Tax=Gammaproteo... [more]
A0A2E2BC22_9GAMM1.990e-1553.13Ferrous iron transport protein A n=1 Tax=Thiotrich... [more]
A0A7W1UJ76_9BACT2.760e-1554.69Ferrous iron transport protein A n=1 Tax=Gemmatimo... [more]
A0A7X4ZDW3_9CLOT1.240e-1350.82Ferrous iron transport protein A n=2 Tax=Clostridi... [more]
A0A1M5V4A3_9CLOT1.300e-1344.12Ferrous iron transport protein A n=1 Tax=Clostridi... [more]
A0A6L7YSA7_9BACT1.340e-1355.74Ferrous iron transport protein A n=1 Tax=Rhodother... [more]
A0A0S8BZ27_9DELT1.440e-1351.56FeoA domain-containing protein n=1 Tax=Myxococcale... [more]
A0A1H9YW34_9FIRM1.760e-1345.45Ferrous iron transport protein A n=1 Tax=[Clostrid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9933contigP-wetherbeei_contig9933:180..389 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1280689.AUJC01000008_gene3035
PFAMsFeoA
Model size210
Max annot lvl186801|Clostridia
KEGG koko:K04758
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.2e-14
EggNOG OGsCOG1918@1|root,COG1918@2|Bacteria,1VEHC@1239|Firmicutes,24QKE@186801|Clostridia,36MMK@31979|Clostridiaceae
DescriptionFe2 transport system protein A
Cds size210
COG categoryP
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187117.6353967-CDS-P-wetherbeei_contig9933:179..3891683187117.6353967-CDS-P-wetherbeei_contig9933:179..389Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9933 180..389 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9933.1.1prot_P-wetherbeei_contig9933.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9933 180..389 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9933.1.1

>prot_P-wetherbeei_contig9933.1.1 ID=prot_P-wetherbeei_contig9933.1.1|Name=mRNA_P-wetherbeei_contig9933.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=70bp
MSTTLASLRPGEVGVVQGFAEIDETAQRLMQMGMVEGMEVEVLRYAPAGD
PIEVRVLGYALSLRVSRSR*
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mRNA from alignment at P-wetherbeei_contig9933:180..389+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9933.1.1 ID=mRNA_P-wetherbeei_contig9933.1.1|Name=mRNA_P-wetherbeei_contig9933.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=210bp|location=Sequence derived from alignment at P-wetherbeei_contig9933:180..389+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCACCACGCTCGCGAGTCTGCGCCCTGGTGAAGTCGGCGTGGTGCA AGGTTTTGCTGAAATCGACGAAACCGCACAGCGCTTGATGCAGATGGGCA TGGTGGAAGGCATGGAAGTGGAAGTCCTGCGCTACGCACCTGCCGGTGAC CCGATTGAAGTCCGCGTGCTTGGTTATGCGCTGTCGTTGCGCGTAAGTCG CAGCCGCTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9933:180..389+

>mRNA_P-wetherbeei_contig9933.1.1 ID=mRNA_P-wetherbeei_contig9933.1.1|Name=mRNA_P-wetherbeei_contig9933.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=210bp|location=Sequence derived from alignment at P-wetherbeei_contig9933:180..389+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCACCACGCTCGCGAGTCTGCGCCCTGGTGAAGTCGGCGTGGTGCA
AGGTTTTGCTGAAATCGACGAAACCGCACAGCGCTTGATGCAGATGGGCA
TGGTGGAAGGCATGGAAGTGGAAGTCCTGCGCTACGCACCTGCCGGTGAC
CCGATTGAAGTCCGCGTGCTTGGTTATGCGCTGTCGTTGCGCGTAAGTCG
CAGCCGCTAA
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