mRNA_P-wetherbeei_contig9926.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9926.1.1 vs. uniprot
Match: A0A6H5KZ36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ36_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 4.910e-20 Identity = 61/160 (38.12%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 1 YVWGRLRTLSEDTSLGNYRWDSGGKFHY-HDWHFDDGHTPTDAEVLMHVFVCVGDTWLAREAQFRGDRPFAKCHYFENPQSLTGPGAIALQGRIALVRVSPIRAPRPRFGVVVDGMGWPATPGKPNVFHAIALFLKAVENRKAGFLSYGVSLGDVLREVF 477 YV RL LSED + + + GG + DW D PTDA ++M +FVC D L R+ + DRPFA+ + + S AL GR L R + P F VV D W A PG NVF AIALF A++ RK+ +L G+S+ +++ E+F Sbjct: 501 YVLSRLSVLSEDDFMSAFDYAGGGGYPAGRDWAAD---LPTDAAIVMKLFVCCSDKLLPRD--WEEDRPFARQFFVDRAPSSQD----ALPGRFFLTRNEVLHPPH--FFVVADQAHWHALPGSTNVFQAIALFFHAIKTRKSSYLGPGISVANIVNEMF 649
BLAST of mRNA_P-wetherbeei_contig9926.1.1 vs. uniprot
Match: D8LJC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC2_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 5.510e-20 Identity = 60/160 (37.50%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 1 YVWGRLRTLSEDTSLGNYRWDSGGKFHY-HDWHFDDGHTPTDAEVLMHVFVCVGDTWLAREAQFRGDRPFAKCHYFENPQSLTGPGAIALQGRIALVRVSPIRAPRPRFGVVVDGMGWPATPGKPNVFHAIALFLKAVENRKAGFLSYGVSLGDVLREVF 477 YV RL LSED + + + GG + DW D PTDA ++M +FVC D L R+ + DRPFA+ + + S AL GR L R + P F V+ D W A PG NVF AIALF A++ RK+ +L G+S+ +++ E+F Sbjct: 271 YVLSRLSVLSEDDFMSAFDYAGGGGYPAGRDWAAD---LPTDAAIVMKLFVCCSDKLLPRD--WEEDRPFARQFFVDRAPSSQD----ALPGRFFLTRNEVLHPPH--FFVIADQAYWHALPGSTNVFQAIALFFHAIKTRKSSYLGPGISVANIVNEMF 419
BLAST of mRNA_P-wetherbeei_contig9926.1.1 vs. uniprot
Match: A0A835YPT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPT6_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.010e-18 Identity = 67/173 (38.73%), Postives = 84/173 (48.55%), Query Frame = 1 Query: 1 YVWGRLRTLSEDTSLGNYRWDSGGKFHYHDWHFDDGHTPTDAEVLMHVFVCVGDTWLAREAQFRGD-RPFAKCHYFENPQSLTGPGAIALQGRIALVRVSPIRA-------------PRPRFGVVVDGMGWPATPGKPNVFHAIALFLKAVENRKAGFLSYGVSLGDVLREVF 477 YV+ RL+ L+ D LG RWD GG W PTDAE++MHVFVC + LAR R D PFA Y E P + PG + R+ LVR +R P + VV G W G+ NVF AIALFL AV+ K+G+L +VL +VF Sbjct: 150 YVYERLQQLAADAQLGGVRWDGGGAHAGAPW---SPALPTDAELVMHVFVCRCNELLARTPAERLDGAPFASRFYDEVPAAALDPGRY--RSRVVLVRTD-VRGGXXXXXXXXXXXXXAPHYQVVAGGEVWTVPAGRLNVFQAIALFLWAVKRFKSGYLGDVNLRHEVLDDVF 316
BLAST of mRNA_P-wetherbeei_contig9926.1.1 vs. uniprot
Match: L8GF75_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GF75_ACACA) HSP 1 Score: 70.1 bits (170), Expect = 3.260e-11 Identity = 43/145 (29.66%), Postives = 73/145 (50.34%), Query Frame = 1 Query: 1 YVWGRLRTLSEDTSLGNYRWDSGGKFHYHDWHFDDGHTPTDAEVLMHVFVCVGDTWLAREAQFRGDRPFAKCHYFENPQSLTGPGAIALQGRIALVRVSPIRAPRPRFGVVVDGMGWPATPGKPNVFHAIALFLKAVENRKAGFL 435 Y+ R++ L+E + +RW+ GG + W + PTD+++L+H+F D L + + ++PF+ +Y P+S P A+ +I V P P F V+ W G+ N+FHAI L++ AV+ R GF+ Sbjct: 188 YIVQRVKELAEGGCMAAFRWNGGGSWQGKPWTTE---LPTDSQILIHLFCAHMDGLLPADPRADKNKPFSSLYYVLAPKS---PDAVPTAAKIYQSHVHP-----PHFKVLEHQEVWDTFQGRNNLFHAIFLWVFAVQTRLDGFI 321
BLAST of mRNA_P-wetherbeei_contig9926.1.1 vs. uniprot
Match: A0A1W4X6H8_AGRPL (transmembrane protein 209 isoform X1 n=2 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4X6H8_AGRPL) HSP 1 Score: 62.8 bits (151), Expect = 1.590e-8 Identity = 41/152 (26.97%), Postives = 72/152 (47.37%), Query Frame = 1 Query: 1 YVWGRLRTLSEDTSLGNYRWDSGGKFHYHDWHFDDGHTPTDAEVLMHVFVCVGDTWLAREAQFRGDRPFAKCHYFENPQSLTGPGAIALQGRIALVRVSPIRAPRPRFGVVVDGMGWPATPGKPNVFHAIALFLKAVENRKAGFLSYGVSLG 456 Y+ R+R L++ S+ ++W+ G F W D PTDA+++MH+FV D L +PF+ H+ ++ + + L +R + P + V++ + + G N+FH+I LFL V ++ G L V+LG Sbjct: 384 YLIKRIRDLTKGGSMSEFKWNGGCSFKGKQW---DDSLPTDAQIIMHLFVSYMDAQLIPLPNKPDAKPFSSSHFIKSTER-----TVELTSNTIALREFMTKPPH--YQVIIGDKVYEVSKGYNNLFHSILLFLYYVNAKEDGMLG-SVNLG 524
BLAST of mRNA_P-wetherbeei_contig9926.1.1 vs. uniprot
Match: A0A4Z2D2M0_SCHJA (Transmembrane protein isoform 2 n=2 Tax=Schistosoma japonicum TaxID=6182 RepID=A0A4Z2D2M0_SCHJA) HSP 1 Score: 53.9 bits (128), Expect = 1.850e-5 Identity = 42/144 (29.17%), Postives = 64/144 (44.44%), Query Frame = 1 Query: 1 YVWGRLRTLSEDTSLGNYRWDSGGKFHYHDWHFDDGHTPTDAEVLMHVFVCVGDTWLAREAQFRGDRPFAKCHYFENPQSLTGPGAIALQGRIALVRVSPIRAPRPRFGVVVDGMGWPATPGKPNVFHAIALFLKAVENRKAGF 432 Y+ RLR L+ ++SL +RWDSG K W H P+D+ +L+++F DT + R F++ + P Q V V P P+F VV++G + G+ NV+HAI +F A F Sbjct: 410 YLVNRLRELARESSLQEFRWDSGSKSIEWPW---KEHLPSDSIILLNLFATYMDTRTPPHPKCLTGRVFSQLNVVRLPDKPDLKSRHNCQ--FYQVSVQP-----PQFKVVLNGRIYGFVTGQKNVYHAILMFFHYYVTTNAKF 543 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9926.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9926.1.1 >prot_P-wetherbeei_contig9926.1.1 ID=prot_P-wetherbeei_contig9926.1.1|Name=mRNA_P-wetherbeei_contig9926.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=159bp YVWGRLRTLSEDTSLGNYRWDSGGKFHYHDWHFDDGHTPTDAEVLMHVFVback to top mRNA from alignment at P-wetherbeei_contig9926:46..1249+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9926.1.1 ID=mRNA_P-wetherbeei_contig9926.1.1|Name=mRNA_P-wetherbeei_contig9926.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1204bp|location=Sequence derived from alignment at P-wetherbeei_contig9926:46..1249+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9926:46..1249+ >mRNA_P-wetherbeei_contig9926.1.1 ID=mRNA_P-wetherbeei_contig9926.1.1|Name=mRNA_P-wetherbeei_contig9926.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig9926:46..1249+ (Phaeothamnion wetherbeei SAG_119_79)back to top |