mRNA_P-wetherbeei_contig9924.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9924.1.1 vs. uniprot
Match: A0A835ZBF7_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF7_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.050e-22 Identity = 57/121 (47.11%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 4 RHRLKAMGIITNLPELGAPSFIGPYNGKPVLITRSGLLT----RHRD-----CFEVDVNVRHWCYLARKGLHLLRPKFRAMALSVAFVIEGRDDDGSLPEQVLGCCALEHIYPGRAAFVPP 339 R R KAM I NL + G P + NG+P LIT+SG +T R R E+D NVRHWC+LAR+ L L P+ + LS+ FVIEGR D LPEQ+LGCC L + P RA + P Sbjct: 332 RSRFKAMARINNLHDAGLPGPVVQNNGRPTLITKSGTVTSGVGRVRGGGSARYLELDCNVRHWCFLARRALRHLLPRAPRVHLSIGFVIEGRAD-AELPEQILGCCELGGVDPDRAVELAP 451
BLAST of mRNA_P-wetherbeei_contig9924.1.1 vs. uniprot
Match: A0A7S2KYG5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYG5_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.530e-22 Identity = 54/115 (46.96%), Postives = 71/115 (61.74%), Query Frame = 1 Query: 4 RHRLKAMGIITNLPELGAPSFIGPYNGKPVLITRSGLLTRHRDC----FEVDVNVRHWCYLARKGLHLLRPKFRAMALSVAFVIEGRDDDGSLPEQVLGCCALEHIYPGRAAFVP 336 R R K M + ++ LG PSF+ YNGKP LIT SG LTRHRD E++VN+R W LARKG+H L+P + ++A IEGRD+D LPE +LG C + + +A F P Sbjct: 603 RSRCKFMVVADDVEALGVPSFLTRYNGKPCLITSSGTLTRHRDAASHYLEMNVNIRMWNALARKGIHSLKPYIPSATFNLAITIEGRDND-ELPEVLLGGCRMMNFDFAQAPFRP 716
BLAST of mRNA_P-wetherbeei_contig9924.1.1 vs. uniprot
Match: A0A7S2GKL0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKL0_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.570e-21 Identity = 47/100 (47.00%), Postives = 61/100 (61.00%), Query Frame = 1 Query: 1 MRHRLKAMGIITNLPELGAPSFIGPYNGKPVLITRSGLLTRHRDCFEVDVNVRHWCYLARKGLHLLRPKFRAMALSVAFVIEGRDDDGSLPEQVLGCCAL 300 M+ R KA+ I N E PS + PYNGKPVL+ R+G+L D E++VNV W + R G + + P +M L AFVIEGR+DD LPEQV+G L Sbjct: 45 MKGRFKAITQIANFDEATVPSLLRPYNGKPVLVKRTGVLRHFEDRLEMNVNVHSWPFHTRMGWNTILPNIPSMVLDSAFVIEGREDD-ELPEQVIGAARL 143
BLAST of mRNA_P-wetherbeei_contig9924.1.1 vs. uniprot
Match: A0A835Z0S6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S6_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.160e-20 Identity = 63/186 (33.87%), Postives = 76/186 (40.86%), Query Frame = 1 Query: 1 MRHRLKAMGIITNLPELGAPSFIGPYNGKPVLITRSGLLTR---------------------------------------------------------------------------HRDCFEVDVNVRHWCYLARKGLHLLRPKFRAMALSVAFVIEGRDDDGSLPEQVLGCCALEHIYPGRAAFV 333 MR R KA+G++ N+ E G PS I YNGKPVL+T+SG L R E+D NVRHWCYLARKGLH L P+F +L VAFV+EGR D LPE+VL C LE + P RA + Sbjct: 310 MRGRFKAIGVVNNVEEAGIPSLIAQYNGKPVLVTKSGTLRRVSGGGGGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAPHLEMDCNVRHWCYLARKGLHHLLPRFARTSLRVAFVLEGRAD-AELPERVLACAQLEGMDPRRARAI 494
BLAST of mRNA_P-wetherbeei_contig9924.1.1 vs. uniprot
Match: W7U5D7_9STRA (EDR2_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5D7_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 3.730e-18 Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = 1 Query: 1 MRHRLKAMGIITNLPELGAPSFIGPYNGKPVLITRSGLL------TRHRDCF--EVDVNVRHWCYLARKGLHLLRPKFRAMALSVAFVIEGRDDDGSLPEQVLGCCALEHI 309 +R RLK + N+ L PSFI YNGKPVLIT+SG L + D E+D+ V + Y+ARKG L+ +F M L +AF++EGR++D LPEQ+LG L ++ Sbjct: 278 VRGRLKVIASCANMDALHLPSFISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREED-ELPEQILGAARLNNV 387
BLAST of mRNA_P-wetherbeei_contig9924.1.1 vs. uniprot
Match: D7G6C9_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6C9_ECTSI) HSP 1 Score: 87.0 bits (214), Expect = 1.300e-17 Identity = 45/105 (42.86%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 10 RLKAMGIITNLPELGAPSFIGPYNGKPVLITRSGLLTRHRDCFEVDVNVRHWCYLARKGLHLLRPKFRAMALSVAFVIEGRDDDGSLPEQVLGCCALEHIYPGRA 324 R K + +I N LG PSFI YNGKPVLI RSG + + E +NV + ++A+K LH L+ F+ M L + F +EGR D LPE +L C L + RA Sbjct: 476 RFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVKGENYIENTINVHRFSFIAKKSLHSLKGLFKDMVLHLGFTVEGRAAD-ELPESLLACSTLHYPMMERA 579
BLAST of mRNA_P-wetherbeei_contig9924.1.1 vs. uniprot
Match: A0A2R5GV50_9STRA (PH domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GV50_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 4.750e-17 Identity = 51/116 (43.97%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 4 RHRLKAMGIITNLPELGAPSFIGPYNGKPVLITRSGLLTRHRDCFEVDVNVRHWCYLARKGLHLLRPKFRA-MALSVAFVIEGRDDDGSLPEQVLGCCALEHIYPGRAAFVP-PAP 345 + RLK +G I N E G P++ +NGKPVLI +SG++ R + FEVD+++R W LARKG+ L P A M V+FVI+G +DD LPE+ + CA + Y VP P+P Sbjct: 861 KERLKLVGYILNPIECGMPNWTQSFNGKPVLIKKSGVIFRDAEVFEVDMDLRQWGILARKGVSALLPSALAKMEFIVSFVIQGEEDD-ELPERSM--CATQFSYLDYKRAVPFPSP 973
BLAST of mRNA_P-wetherbeei_contig9924.1.1 vs. uniprot
Match: A0A482RWA7_9ARCH (DUF1336 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWA7_9ARCH) HSP 1 Score: 77.8 bits (190), Expect = 5.330e-16 Identity = 38/109 (34.86%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 13 LKAMGIITNLPELGAPSFIGPYNGKPVLITRSGLLTRH--RDCFEVDVNVRHWCYLARKGLHLLRPKFRAMALSVAFVIEGRDDDGSLPEQVLGCCALEHIYPGRAAFV 333 L+ + + TN ELG PS I YNGKPVLI R+G + + E++++V + +A++ +++L + +M +++ FVIEGR+D LPE + CC++ +A F+ Sbjct: 24 LQVICLCTNFEELGFPSMITQYNGKPVLIRRTGTIFKDPANRYLEMNIHVHKFATMAKQSIYMLTSRANSMNMNIGFVIEGREDK-ELPETLFACCSVSRPQEEQAEFI 131
BLAST of mRNA_P-wetherbeei_contig9924.1.1 vs. uniprot
Match: A0A7S2W974_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W974_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.590e-15 Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 7 HRLKAMGIITNLPELGAPSFIGPYNGKPVLITR-------SGLLTRHRDCFEVDVNVRHWCYLARKGLHLLRPKFRAMALSVAFVIEGRDDDGSLPEQVLGCCALEHI 309 +R K +G++ N E+G PS + YNGKPVLI SG++ + +D + VNVR W LAR GLH L L V F IEGR DD LPE +LG + H+ Sbjct: 218 NRFKCIGMLRNYEEVGMPSIMKGYNGKPVLIRNRSAVKGGSGVMDQQQDSIIMHVNVRLWPLLARTGLHTLFGASAKCDLDVGFTIEGRADD-ELPEVLLGAVHIAHL 324
BLAST of mRNA_P-wetherbeei_contig9924.1.1 vs. uniprot
Match: A0A7S2BHI8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHI8_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 6.270e-15 Identity = 43/114 (37.72%), Postives = 69/114 (60.53%), Query Frame = 1 Query: 1 MRHRLKAMGIITNLPELGAPSFIGPYNGKPVLITRSGLLTRHRD----------CFEVDVNV-RHWCYLARKGLHLLRPKFRAMALSVAFVIEGRDDDGSLPEQVLGCCALEHI 309 +R LK +G+I NL E+ APSF+ YNGKPVL++ +G+ T R E+D++V +++ Y+A++G+ + + +AFV+EGR+DD LPE L C L+H+ Sbjct: 124 LRGCLKLIGLIQNLAEINAPSFVSGYNGKPVLMSEAGMSTAKRKGNAEIYRGPGYLEIDIDVAKNFSYVAQRGVCWMLGTADKLIADIAFVLEGREDD-LLPECPLACMRLDHM 236 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9924.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9924.1.1 >prot_P-wetherbeei_contig9924.1.1 ID=prot_P-wetherbeei_contig9924.1.1|Name=mRNA_P-wetherbeei_contig9924.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp MRHRLKAMGIITNLPELGAPSFIGPYNGKPVLITRSGLLTRHRDCFEVDVback to top mRNA from alignment at P-wetherbeei_contig9924:21..365+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9924.1.1 ID=mRNA_P-wetherbeei_contig9924.1.1|Name=mRNA_P-wetherbeei_contig9924.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig9924:21..365+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9924:21..365+ >mRNA_P-wetherbeei_contig9924.1.1 ID=mRNA_P-wetherbeei_contig9924.1.1|Name=mRNA_P-wetherbeei_contig9924.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig9924:21..365+ (Phaeothamnion wetherbeei SAG_119_79)back to top |