mRNA_P-wetherbeei_contig9917.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9917.1.1
Unique NamemRNA_P-wetherbeei_contig9917.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9917.1.1 vs. uniprot
Match: A0A7C4TQF5_9HYPH (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TQF5_9HYPH)

HSP 1 Score: 468 bits (1203), Expect = 3.980e-161
Identity = 240/375 (64.00%), Postives = 294/375 (78.40%), Query Frame = 1
Query:   28 RRRVYEILEGAKDGDNASLLFDRLLVALIILNVAAFMAETVPWIEAKCGNWLSLFETFSVTMFAIEYVARIWSAVEVPYLARLPGWRARLTWAMRPYLIIDLIAVLPYFLHHLLGLDLRIVRXXXXXXXXXXXRYSPAMHTLARVVYGERRALVGASYLLIAAVTFAATGIYYLEHEAQPDKFGSVPESAWWAISTLTTVGYGDLVPVTAGGKIFGSVVMVCGLCILALPVAIISTGFAQEVNRRDFVINWSLMSRVPVLANLDAFQIAEVMPLFHAHNVPPRTEVVAAGAPGHAIYFVAGGQVQF-ACDVLEFTYGTGEFFGVGATLHNDTHYGTFRTVGRCRLLKLYKEDFKRLQHIAPEVARHLYAAATERQ 1149
            RRR YEI+ G +  D A+ +FD  LVALI+LNVAAF AETVP +EA+ G+W   FE  SV +F +EYV RIW+AVEVP+L R P ++ARL WA RPYL+IDL+A+LP++L     +DLR++ XXXXXXXXX  RYSPA+HTL RV+  ERRAL  A  LL AAV  A+TGIY+LE EAQPDKFGSVPESAWWAI+TLTTVGYGD+ P+T  G++FG +VMVCGLCILALPVAII+TGFAQE++RRDFV+ WSLMSR+P+LA+LDA ++AE+MPLFHAHN+PPRTE++A GAP  AIYFVA G+VQ  A    E ++  GEFFG  A L ND   G++RTVG CRLLKLYK DF RL+  +P +A H+   A ERQ
Sbjct:   40 RRRAYEIVVGGRGTDRAAEIFDAFLVALILLNVAAFAAETVPSLEARYGSWFDAFEVLSVAVFTVEYVVRIWTAVEVPFLKRRPPFKARLAWASRPYLVIDLLAILPFYLGQFFVIDLRVLXXXXXXXXXXLSRYSPALHTLIRVLNNERRALTAAGLLLTAAVLLASTGIYFLEQEAQPDKFGSVPESAWWAIATLTTVGYGDVTPITPLGRLFGGIVMVCGLCILALPVAIIATGFAQEMSRRDFVVTWSLMSRIPLLADLDAKEVAEIMPLFHAHNLPPRTEIIAHGAPYSAIYFVASGRVQLVAAGGEELSFAVGEFFGATAILGNDLAAGSYRTVGHCRLLKLYKHDFHRLEAASPALAGHIRRVALERQ 414          
BLAST of mRNA_P-wetherbeei_contig9917.1.1 vs. uniprot
Match: A0A2S5PED1_HYPSQ (Cyclic nucleotide-binding protein n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5PED1_HYPSQ)

HSP 1 Score: 426 bits (1095), Expect = 3.700e-145
Identity = 230/371 (61.99%), Postives = 276/371 (74.39%), Query Frame = 1
Query:   28 RRRVYEILEGAKDGDNASLLFDRLLVALIILNVAAFMAETVPWIEAKCGNWLSLFETFSVTMFAIEYVARIWSAVEVPYLARLPGWRARLTWAMRPYLIIDLIAVLPYFLHHLLGLDLRIVRXXXXXXXXXXXRYSPAMHTLARVVYGERRALVGASYLLIAAVTFAATGIYYLEHEAQPDKFGSVPESAWWAISTLTTVGYGDLVPVTAGGKIFGSVVMVCGLCILALPVAIISTGFAQEVNRRDFVINWSLMSRVPVLANLDAFQIAEVMPLFHAHNVPPRTEVVAAGAPGHAIYFVAGGQVQFACDVLEFTYGTGEFFGVGATLHNDTHYGTFRTVGRCRLLKLYKEDFKRLQHIAPEVARHLYAAAT 1140
            RRR+YE++E     D AS +FD  LV LI LN+AAF+AE+VP   A        FE FSV  F IEY+AR+W AVEVPYL RL    AR  +A RP  +IDL AVLP++L  +  +DLR++ XXXXXXXXXX RYSPAMHTL RV+  E+RAL GA+ LL AAV FA+TGI+YLE EAQPDKFGS+PE+AWWA++TLTTVGYGD+ P T  GK+FG++VMV GLCILALPVAIISTGFAQE NRRDFV+NWS+MS++P+LA LDA   A V+PLFHAHN+PP  EV+A GA G+AIYF+A G V+        +Y +GE FG    L  D H  T+ T GRCRLLKLYKEDFKRL+ IAPEVA  + AA T
Sbjct:    8 RRRIYEVMELGNGEDRASHIFDSTLVLLICLNIAAFVAESVPRFRAAYSAEFQAFELFSVVAFTIEYLARLWIAVEVPYLKRLSPLSARWRFARRPAQVIDLAAVLPFYLGQMFAIDLRVLXXXXXXXXXXXSRYSPAMHTLIRVISNEQRALSGAALLLAAAVLFASTGIHYLEAEAQPDKFGSIPEAAWWAVATLTTVGYGDVTPHTPLGKLFGAIVMVIGLCILALPVAIISTGFAQEANRRDFVVNWSMMSKIPLLAELDARDAAIVLPLFHAHNLPPNVEVIAEGAAGNAIYFIASGHVRRRNAASAHSYRSGEVFGGIGMLGGDQHTATYLTAGRCRLLKLYKEDFKRLELIAPEVAGRIRAAVT 378          
BLAST of mRNA_P-wetherbeei_contig9917.1.1 vs. uniprot
Match: UPI000382C0F6 (cyclic nucleotide-gated ion channel/potassium channel family protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI000382C0F6)

HSP 1 Score: 420 bits (1080), Expect = 7.980e-143
Identity = 212/380 (55.79%), Postives = 272/380 (71.58%), Query Frame = 1
Query:   13 PRPTFRRRVYEILEGAKDGDNASLLFDRLLVALIILNVAAFMAETVPWIEAKCGNWLSLFETFSVTMFAIEYVARIWSAVEVPYLARLPGWRARLTWAMRPYLIIDLIAVLPYFLHHLLGLDLRIVRXXXXXXXXXXXRYSPAMHTLARVVYGERRALVGASYLLIAAVTFAATGIYYLEHEAQPDKFGSVPESAWWAISTLTTVGYGDLVPVTAGGKIFGSVVMVCGLCILALPVAIISTGFAQEVNRRDFVINWSLMSRVPVLANLDAFQIAEVMPLFHAHNVPPRTEVVAAGAPGHAIYFVAGGQVQFACDVLEFTYGTGEFFGVGATLHNDTHYGTFRTVGRCRLLKLYKEDFKRLQHIAPEVARHLYAAATERQK 1152
            P  + RRRV+EI+E       AS +FD  +VALI+LN+AAF+AETVP +      + + FE  SV +F++EY  R+W+AVEVP+L RLP W+ARL  A+RP L+IDL A+LP+FL  LL +DLR++R           RYSPA+HTL RV+  E+RAL+GA  LL+  V FA+TGIYY+E  AQPDKFGSVP+SAWWAI+TLTTVGYGD+ PVT  G++FGSVVMV GLCILALPVAIIS GFAQE+ RRDFV+ WSLMSR+P+LA LDA  + +VMPL HAHN+PP  EV+  G  G A++F+A GQV       E  Y  G+FFGV A L  +   G+F T  +CRLLKL+ EDF RL+ ++PE+  +L   A  R++
Sbjct:   19 PHVSLRRRVFEIIEVGHGDSRASRIFDGAIVALILLNIAAFVAETVPSLSDAYDPFFNFFEILSVAIFSLEYGLRLWTAVEVPFLKRLPPWKARLKLALRPALLIDLAAILPFFLGTLLNVDLRVLRALRLLRFFKLSRYSPALHTLLRVIANEQRALIGAGLLLMTVVLFASTGIYYIEGAAQPDKFGSVPDSAWWAIATLTTVGYGDVAPVTPLGRLFGSVVMVTGLCILALPVAIISAGFAQELGRRDFVVTWSLMSRIPLLAELDAGAVEKVMPLLHAHNLPPNVEVLGEGTAGQAMFFIASGQVVLRTPEGERVYSKGDFFGVVAMLEQEFSQGSFVTRSKCRLLKLHSEDFHRLEVVSPEIGDYLRRKAQLRRE 398          
BLAST of mRNA_P-wetherbeei_contig9917.1.1 vs. uniprot
Match: UPI0009FA04FB (cyclic nucleotide-gated ion channel/potassium channel family protein n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI0009FA04FB)

HSP 1 Score: 414 bits (1065), Expect = 3.050e-140
Identity = 199/368 (54.08%), Postives = 267/368 (72.55%), Query Frame = 1
Query:   22 TFRRRVYEILEGAKDGDNASLLFDRLLVALIILNVAAFMAETVPWIEAKCGNWLSLFETFSVTMFAIEYVARIWSAVEVPYLARLPGWRARLTWAMRPYLIIDLIAVLPYFLHHLLGLDLRIVRXXXXXXXXXXXRYSPAMHTLARVVYGERRALVGASYLLIAAVTFAATGIYYLEHEAQPDKFGSVPESAWWAISTLTTVGYGDLVPVTAGGKIFGSVVMVCGLCILALPVAIISTGFAQEVNRRDFVINWSLMSRVPVLANLDAFQIAEVMPLFHAHNVPPRTEVVAAGAPGHAIYFVAGGQVQFACDVLEFTYGTGEFFGVGATLHNDTHYGTFRTVGRCRLLKLYKEDFKRLQHIAPEVARHL 1125
            ++R R++EI+E    G  AS +FD ++++LI+LN+AAF+AETVP + A  G++ + FE  SV +F +EY  R+W+AVEVP+L   P W+ARL +A+RP L+IDL A+LP+++  L+ +DLR++R           RYSPAMHTL RV+  ERR+L+GA  LL+  V FA+TGIYY+E  AQP+ FGSVP++AWWAI+TLTTVGYGD+ P+T+ GK FGS+VMV GLCILALPVAIIS GFAQE+ RRDFV+ WSLMSR+P+ A LDA  + ++MPL HAHN+PP  EV + GA G A+YF+A GQV       +  Y  G+FFGV   L  +   G+F T  +CRLLKL+ EDF RL+  +PE+  HL
Sbjct:   39 SWRARIFEIIEFGHGGSRASRVFDSVIISLILLNIAAFVAETVPSLSAAYGSYFTAFEVLSVAIFTVEYALRLWTAVEVPFLKSFPPWKARLKFALRPALLIDLAAILPFYIAMLVTIDLRVLRALRLLRFFKLSRYSPAMHTLLRVLVNERRSLIGAGLLLLTVVLFASTGIYYIEGHAQPESFGSVPDAAWWAIATLTTVGYGDVAPITSLGKTFGSIVMVTGLCILALPVAIISAGFAQELARRDFVVTWSLMSRIPLFAELDARSVEKIMPLLHAHNLPPNLEVQSEGAAGRAMYFIASGQVVHHLASGDRIYAKGDFFGVSEMLELEQMQGSFVTASKCRLLKLHSEDFHRLEVASPEIGSHL 406          
BLAST of mRNA_P-wetherbeei_contig9917.1.1 vs. uniprot
Match: F8JB65_HYPSM (Putative transcriptional regulator, Crp/Fnr family n=3 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=F8JB65_HYPSM)

HSP 1 Score: 410 bits (1053), Expect = 9.240e-139
Identity = 217/373 (58.18%), Postives = 268/373 (71.85%), Query Frame = 1
Query:   22 TFRRRVYEILEGAKDGDNASLLFDRLLVALIILNVAAFMAETVPWIEAKCGNWLSLFETFSVTMFAIEYVARIWSAVEVPYLARLPGWRARLTWAMRPYLIIDLIAVLPYFLHHLLGLDLRIVRXXXXXXXXXXXRYSPAMHTLARVVYGERRALVGASYLLIAAVTFAATGIYYLEHEAQPDKFGSVPESAWWAISTLTTVGYGDLVPVTAGGKIFGSVVMVCGLCILALPVAIISTGFAQEVNRRDFVINWSLMSRVPVLANLDAFQIAEVMPLFHAHNVPPRTEVVAAGAPGHAIYFVAGGQVQFACDVLEFTYGTGEFFGVGATLHNDTHYGTFRTVGRCRLLKLYKEDFKRLQHIAPEVARHLYAAAT 1140
            T R+R+YEI+E  +  D AS LFD  +V LI+LNVAAF+AETVP +EA    W   FE FSV +F IEY  R+W+A EVPYL R   W+ARL  A  P LIIDL+A LP++L  ++ +DLRI+R XXXXXXXX  RYSPAM+TL RV+  ER+AL GA  LL  A+ F+AT +YY+E  AQPDKFG++PE+AWW+I+TLTTVGYGD+ P+TA GK+ GSV MV GLCILALPVAIISTGFAQE+ RRDFVI+WSLMSRVP+LA LDA + +E+MPL  AHN+PP  EVV  G+PG A+YF+A G+++   D     Y  G+ FGV     N  H     T  RCRLLKL +EDF RL    P +A H+   AT
Sbjct:   20 TLRKRIYEIIETGQGDDKASKLFDSFIVVLILLNVAAFVAETVPSLEAAWRPWFHWFEVFSVAIFTIEYGLRLWTATEVPYLNRKHPWKARLNLACHPALIIDLLAFLPFYLSAIVLIDLRILRTXXXXXXXXLSRYSPAMYTLIRVLSNERKALAGAGLLLAMALLFSATLMYYIEGNAQPDKFGTIPEAAWWSIATLTTVGYGDVTPITALGKLVGSVTMVMGLCILALPVAIISTGFAQELQRRDFVISWSLMSRVPLLARLDAKEASEIMPLLEAHNLPPNVEVVKKGSPGDAMYFIASGRLEKLEDGQRHVYSVGDVFGVETMFENSAHGEAIITSSRCRLLKLQREDFHRLASKQPRIASHIRRLAT 392          
BLAST of mRNA_P-wetherbeei_contig9917.1.1 vs. uniprot
Match: A0A433B0M8_HYPSQ (Cyclic nucleotide-binding domain-containing protein n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A433B0M8_HYPSQ)

HSP 1 Score: 409 bits (1051), Expect = 1.740e-138
Identity = 217/381 (56.96%), Postives = 269/381 (70.60%), Query Frame = 1
Query:    1 PNATPRPTFRRRVYEILEGAKDGDNASLLFDRLLVALIILNVAAFMAETVPWIEAKCGNWLSLFETFSVTMFAIEYVARIWSAVEVPYLARLPGWRARLTWAMRPYLIIDLIAVLPYFLHHLLGLDLRIVRXXXXXXXXXXXRYSPAMHTLARVVYGERRALVGASYLLIAAVTFAATGIYYLEHEAQPDKFGSVPESAWWAISTLTTVGYGDLVPVTAGGKIFGSVVMVCGLCILALPVAIISTGFAQEVNRRDFVINWSLMSRVPVLANLDAFQIAEVMPLFHAHNVPPRTEVVAAGAPGHAIYFVAGGQVQFACDVLEFTYGTGEFFGVGATLHNDTHYGTFRTVGRCRLLKLYKEDFKRLQHIAPEVARHLYAAATE 1143
            P+A  R T RRRVYEI+E        S  FD  +V LI+LNVAAF+AETVP + A  G     FE FSV +F IEY+ R+W+AVEVPYL+R   WRARL +A +P LIIDL A+LP++L  L  +DLR++R  XXXXXX   RYSPAM+TL RV+  ERRAL+GA  LL   + F++T +YY+E EAQP+KFGSVP++AWWAI+TLTTVGYGD  P+TA GKI G + M+ GLCILALPVAIISTGFAQE+ RRDFV+ WSLMSRVP+LA LDA + AE+MPL  AHN+PP  EVV  GAPG A+YF+A G+++   D  E  Y  G+ FGV A      H     T  +CRLLKL ++DF RL    P +A H+   AT+
Sbjct:   13 PSALQRKTLRRRVYEIIETGHGESWISKSFDSFIVMLILLNVAAFVAETVPKLRAMWGREFYYFECFSVAIFTIEYLLRLWTAVEVPYLSRTGSWRARLKFARQPALIIDLFAILPFYLSGLFAIDLRVLRTLXXXXXXKLSRYSPAMYTLIRVLSNERRALLGAVLLLAXXLLFSSTLMYYVEGEAQPEKFGSVPDAAWWAIATLTTVGYGDAAPITALGKIVGGITMITGLCILALPVAIISTGFAQELQRRDFVVTWSLMSRVPLLARLDAREAAEIMPLLQAHNLPPNFEVVRKGAPGDAVYFIASGKLETRTDDGERVYVAGDVFGVAAMFDESVHRDAVITSSKCRLLKLQRDDFYRLASKQPHIASHIRNLATD 393          
BLAST of mRNA_P-wetherbeei_contig9917.1.1 vs. uniprot
Match: A0A258L161_9HYPH (Cyclic nucleotide-binding domain-containing protein n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A258L161_9HYPH)

HSP 1 Score: 409 bits (1050), Expect = 2.910e-138
Identity = 211/362 (58.29%), Postives = 267/362 (73.76%), Query Frame = 1
Query:   22 TFRRRVYEILEGAKDGDNASLLFDRLLVALIILNVAAFMAETVPWIEAKCGNWLSLFETFSVTMFAIEYVARIWSAVEVPYLARLPGWRARLTWAMRPYLIIDLIAVLPYFLHHLLGLDLRIVRXXXXXXXXXXXRYSPAMHTLARVVYGERRALVGASYLLIAAVTFAATGIYYLEHEAQPDKFGSVPESAWWAISTLTTVGYGDLVPVTAGGKIFGSVVMVCGLCILALPVAIISTGFAQEVNRRDFVINWSLMSRVPVLANLDAFQIAEVMPLFHAHNVPPRTEVVAAGAPGHAIYFVAGGQVQFACDVLEFTYGTGEFFGVGATLHNDTHYGTFRTVGRCRLLKLYKEDFKRLQHIAP 1107
            + R+++Y I+E  +  + AS +FD  ++ LI+LNVAA + ETVP   A  G     F  FSV +F IEYV R+W+AVEVP+L R P W+ARL  A  P LIIDL+A+LP++L  +LGLDLRI+R XXXXXXX   RYSPA+HTL RV+  ERR+L+GAS LLI A+ FA+ GIY +E  AQPDKFGS+P+SAWWAI+TLTTVGYGD  P+T  G++FG  VMV GLCILALPVAIIS GFAQEVNRRDFV+NWSLMSR+P+LA LDA ++ E+MPL HAHNVPP++EV+ AG P  A+YFVA G+V+      +  +  G+FFG  + L +D     F T  +CRLLKL+ EDF RL+ I P
Sbjct:   23 SLRQQIYHIIEVGRGDNGASRVFDVFILTLILLNVAAVVMETVPSYAAAYGAQFEAFNIFSVAVFTIEYVLRLWTAVEVPFLRRYPPWQARLKLAATPALIIDLLAILPFYLQAILGLDLRILRVXXXXXXXKLSRYSPALHTLVRVLSNERRSLLGASLLLITALLFASAGIYLIESHAQPDKFGSIPDSAWWAIATLTTVGYGDATPITPLGRVFGGFVMVAGLCILALPVAIISAGFAQEVNRRDFVVNWSLMSRIPLLAELDAREVGELMPLLHAHNVPPKSEVLQAGLPARAMYFVASGKVRMLHPEADIEFEAGDFFGATSMLLSDAPSAPFVTATKCRLLKLHAEDFHRLELINP 384          
BLAST of mRNA_P-wetherbeei_contig9917.1.1 vs. uniprot
Match: A0A433A7P5_HYPSQ (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A433A7P5_HYPSQ)

HSP 1 Score: 401 bits (1031), Expect = 2.280e-135
Identity = 214/373 (57.37%), Postives = 264/373 (70.78%), Query Frame = 1
Query:   25 FRRRVYEILEGAKDGDNASLLFDRLLVALIILNVAAFMAETVPWIEAKCGNWLSLFETFSVTMFAIEYVARIWSAVEVPYLARLPGWRARLTWAMRPYLIIDLIAVLPYFLHHLLGLDLRIVRXXXXXXXXXXXRYSPAMHTLARVVYGERRALVGASYLLIAAVTFAATGIYYLEHEAQPDKFGSVPESAWWAISTLTTVGYGDLVPVTAGGKIFGSVVMVCGLCILALPVAIISTGFAQEVNRRDFVINWSLMSRVPVLANLDAFQIAEVMPLFHAHNVPPRTEVVAAGAPGHAIYFVAGGQVQFACDVLEFTYGTGEFFGVGATLHNDTHYGTFRTVGRCRLLKLYKEDFKRLQHIAPEVARHLYAAATE 1143
             R R+YEI+E     D AS +FD  +VALI+LNVAAF+AETVP + A  G     FE FSV  F IEY  RIW+AVEVPYLAR    +ARL +A +P LIIDL+A LP+++  +  +DLRI+R  XXXXXX   RYSPAM+TL RV+  ER+AL GA  LL  A+ F+AT +YY+E +AQP+KFGSVPE+AWWAI+TLTTVGYGD  P+TA GK+ G + M+ GLCILALPVAIISTGFAQE+ RRDFVI+WSLMSRVP+LA LDA + AE+MPL  AHN+PP  EVV  GAPG A+YF+A G+++   +     Y  G+ FGV A   N  H     T  RCRLLKL +ED+ RL    P VA H+   A +
Sbjct:   20 LRHRIYEIIETGHGEDAASKIFDSFIVALILLNVAAFVAETVPNMRAHWGTLFHYFEIFSVAAFTIEYALRIWTAVEVPYLARARPLKARLKFARQPALIIDLLAFLPFYVSAVFPIDLRILRTLXXXXXXKLSRYSPAMYTLIRVLSNERKALAGAGLLLAMALLFSATLMYYIEGDAQPEKFGSVPEAAWWAIATLTTVGYGDATPITALGKVVGGLTMITGLCILALPVAIISTGFAQELQRRDFVISWSLMSRVPMLARLDAKEAAEIMPLLEAHNLPPNVEVVKKGAPGDAMYFIASGKLEKFVNGERHVYSAGDVFGVDAMFENGLHGDAVITASRCRLLKLQREDYHRLASKQPRVALHIRRLAAD 392          
BLAST of mRNA_P-wetherbeei_contig9917.1.1 vs. uniprot
Match: A0A2H6IVJ0_9BACT (Cyclic nucleotide-gated potassium channel n=3 Tax=Bacteria TaxID=2 RepID=A0A2H6IVJ0_9BACT)

HSP 1 Score: 326 bits (835), Expect = 9.050e-106
Identity = 165/377 (43.77%), Postives = 241/377 (63.93%), Query Frame = 1
Query:   22 TFRRRVYEILEGAKDGDNASLLFDRLLVALIILNVAAFMAETVPWIEAKCGNWLSLFETFSVTMFAIEYVARIWSAVEVPYLARLPGWRARLTWAMRPYLIIDLIAVLPYFLHHLLGLDLRIVRXXXXXXXXXXXRYSPAMHTLARVVYGERRALVGASYLLIAAVTFAATGIYYLEHEAQPDKFGSVPESAWWAISTLTTVGYGDLVPVTAGGKIFGSVVMVCGLCILALPVAIISTGFAQEVNRRDFVINWSLMSRVPVLANLDAFQIAEVMPLFHAHNVPPRTEVVAAGAPGHAIYFVAGGQVQFACDVLEFTYGTGEFFGVGATLHNDTHYGTFRTVGRCRLLKLYKEDFKRLQHIAPEVARHLYAAATERQK 1152
            + R+R+++ILE   + D  + L + +LV LI+LNVAAF AET+P +  +  N   LF   SV +F++EYV R+WS  E+P L     WRARL +AMRP LIIDLIA+LP++L  L+G+DLR++R           RYSPA+  L RV+  ERRAL GA  +++A + FA++G+Y++E   QP+ FGS+P +AWWA++TLTTVGYGD+ PVT+ GK FG ++M+ GL + ALP+ II+TGF+QE NRR+FVI W +++RVP+ A L+A  +A +  + ++ +      ++  G    A++F++ G+V       +   G G+FFG  A L+          V  CRLL L K DF+RL H  PE+  H+   A  R K
Sbjct:   18 SLRQRIHDILEYGSEHDPVTRLVNTILVTLILLNVAAFAAETMPDVGPRYRNLFELFNLVSVAIFSVEYVLRLWSCTEMPLLRAQRPWRARLKFAMRPLLIIDLIAILPFYLGFLIGVDLRVLRVLRLFRFLKLARYSPALVALGRVIANERRALFGALLVMLALLLFASSGMYFIERNVQPEVFGSIPSAAWWALATLTTVGYGDVTPVTSLGKAFGGLIMIFGLGMFALPIGIIATGFSQEANRREFVITWGMVARVPLFAQLEATVVARIGAMLYSRSYVAGEPIMRIGDDADAMFFISSGEVAVETGEGQVRLGEGDFFGEMALLYRRRREHNVTAVTNCRLLVLDKLDFERLCHSEPELVSHVRRVAEARLK 394          
BLAST of mRNA_P-wetherbeei_contig9917.1.1 vs. uniprot
Match: A0A7V2SP69_9HYPH (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7V2SP69_9HYPH)

HSP 1 Score: 323 bits (827), Expect = 8.210e-105
Identity = 174/370 (47.03%), Postives = 243/370 (65.68%), Query Frame = 1
Query:    4 NATPRPTFRRRVYEILEGAKDGDNASLLFDRLLVALIILNVAAFMAETVPWIEAKCGNWLSLFETFSVTMFAIEYVARIWSAVEVPYLARLPGWRARLTWAMRPYLIIDLIAVLPYFLHHLLGLDLRIVRXXXXXXXXXXXRYSPAMHTLARVVYGERRALVGASYLLIAAVTFAATGIYYLEHEAQPDKFGSVPESAWWAISTLTTVGYGDLVPVTAGGKIFGSVVMVCGLCILALPVAIISTGFAQEVNRRDFVINWSLMSRVPVLANLDAFQIAEVMPLFHAHNVPPRTEVVAAGAPGHAIYFVAGGQVQFACDVLEFTYGTGEFFGVGATLHNDTHYGTFRTVGRCRLLKLYKEDFKRLQHIAPEV 1113
            N T    +RRR +E+LE     D AS   D  ++ L+I N+ AFM  TVP IEA+ G     FE FSV +F +EY+ARIW++ E P+ ++ P W+ RL +A+RP  +IDL+ +LP++L  L  +DLR++ XXXXXXXXXX RYSPAM +L  V+  ERRAL GA  L++  + FA+TGIY+LEH+AQPD FGSVP + WWA++TLTTVGYGD+ P+T  GKIFG +VMV GL + ALP+ I++TGF+QE +RR+FV++W+L++ VP+ A LD  +IA ++P+ ++    P   +V  G    A+YF+A G+V+            G+ FG  A L       T R + +CRLL L   DF RL    PE+
Sbjct:    4 NPTSWQIYRRRAHELLEQGGTEDIASRSVDFFIIGLVIANIIAFMFSTVPEIEAQWGLTFERFEVFSVAVFTLEYIARIWASAEFPFSSKEPVWKTRLKFALRPLQVIDLLVILPFYLSFLFAMDLRVLXXXXXXXXXXXARYSPAMQSLVAVISNERRALFGALLLMVCLLLFASTGIYFLEHKAQPDAFGSVPAALWWAVATLTTVGYGDVTPITPWGKIFGGLVMVFGLGMFALPIGIMATGFSQETHRREFVVSWNLVANVPMFAQLDGAEIARLLPVLNSATFEPGQLIVHEGDLAKAMYFIASGKVEVETAHGLVPLSEGDHFGEMALLEKRQRSHTVRALTKCRLLILEAPDFHRLMRGRPEL 373          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9917.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TQF5_9HYPH3.980e-16164.00Cyclic nucleotide-binding domain-containing protei... [more]
A0A2S5PED1_HYPSQ3.700e-14561.99Cyclic nucleotide-binding protein n=2 Tax=Hyphomic... [more]
UPI000382C0F67.980e-14355.79cyclic nucleotide-gated ion channel/potassium chan... [more]
UPI0009FA04FB3.050e-14054.08cyclic nucleotide-gated ion channel/potassium chan... [more]
F8JB65_HYPSM9.240e-13958.18Putative transcriptional regulator, Crp/Fnr family... [more]
A0A433B0M8_HYPSQ1.740e-13856.96Cyclic nucleotide-binding domain-containing protei... [more]
A0A258L161_9HYPH2.910e-13858.29Cyclic nucleotide-binding domain-containing protei... [more]
A0A433A7P5_HYPSQ2.280e-13557.37Cyclic nucleotide-binding domain-containing protei... [more]
A0A2H6IVJ0_9BACT9.050e-10643.77Cyclic nucleotide-gated potassium channel n=3 Tax=... [more]
A0A7V2SP69_9HYPH8.210e-10547.03Cyclic nucleotide-binding domain-containing protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9917contigP-wetherbeei_contig9917:323..1474 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1267005.KB911257_gene755
PFAMsIon_trans,cNMP_binding
Model size1152
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K10716
KEGG TC1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.31e-143
EggNOG OGsCOG2905@1|root,COG2905@2|Bacteria,1QUQR@1224|Proteobacteria,2TWQS@28211|Alphaproteobacteria
DescriptionIon transport protein
Cds size1152
COG categoryT
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187116.7981617-CDS-P-wetherbeei_contig9917:322..14741683187116.7981617-CDS-P-wetherbeei_contig9917:322..1474Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9917 323..1474 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9917.1.1prot_P-wetherbeei_contig9917.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9917 323..1474 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9917.1.1

>prot_P-wetherbeei_contig9917.1.1 ID=prot_P-wetherbeei_contig9917.1.1|Name=mRNA_P-wetherbeei_contig9917.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=384bp
PNATPRPTFRRRVYEILEGAKDGDNASLLFDRLLVALIILNVAAFMAETV
PWIEAKCGNWLSLFETFSVTMFAIEYVARIWSAVEVPYLARLPGWRARLT
WAMRPYLIIDLIAVLPYFLHHLLGLDLRIVRLMRVLRLLRLSRYSPAMHT
LARVVYGERRALVGASYLLIAAVTFAATGIYYLEHEAQPDKFGSVPESAW
WAISTLTTVGYGDLVPVTAGGKIFGSVVMVCGLCILALPVAIISTGFAQE
VNRRDFVINWSLMSRVPVLANLDAFQIAEVMPLFHAHNVPPRTEVVAAGA
PGHAIYFVAGGQVQFACDVLEFTYGTGEFFGVGATLHNDTHYGTFRTVGR
CRLLKLYKEDFKRLQHIAPEVARHLYAAATERQK
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mRNA from alignment at P-wetherbeei_contig9917:323..1474-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9917.1.1 ID=mRNA_P-wetherbeei_contig9917.1.1|Name=mRNA_P-wetherbeei_contig9917.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1152bp|location=Sequence derived from alignment at P-wetherbeei_contig9917:323..1474- (Phaeothamnion wetherbeei SAG_119_79)
CCCAACGCGACGCCCCGCCCCACATTCCGCAGACGTGTCTATGAAATCCT GGAAGGCGCGAAGGACGGCGATAATGCGTCGCTGCTGTTCGACCGGCTGC TGGTTGCCCTCATCATTCTGAACGTCGCGGCATTCATGGCGGAAACGGTG CCGTGGATCGAAGCGAAATGCGGCAACTGGCTGTCGTTGTTCGAGACGTT CTCCGTGACGATGTTCGCGATCGAGTATGTCGCGCGGATCTGGTCGGCCG TCGAAGTGCCGTATCTCGCGCGTCTGCCGGGCTGGCGGGCGCGGCTGACA TGGGCGATGCGACCCTACCTGATCATCGATCTGATCGCTGTTTTACCCTA TTTCCTGCACCATCTGCTCGGATTGGACCTGCGGATCGTGCGCCTGATGC GCGTGCTGCGACTGTTGCGGTTGTCGCGCTATTCGCCAGCTATGCATACG CTGGCGCGGGTCGTTTACGGCGAGCGGCGCGCGCTGGTCGGCGCATCGTA TCTCCTGATCGCCGCGGTTACTTTCGCCGCCACCGGCATCTACTACCTGG AGCACGAGGCGCAGCCCGACAAGTTTGGTAGTGTTCCCGAAAGTGCGTGG TGGGCCATCTCGACGCTGACGACGGTCGGCTACGGCGATCTCGTGCCGGT GACGGCCGGCGGCAAAATCTTTGGTTCGGTGGTGATGGTGTGCGGCCTGT GCATCCTGGCGCTGCCGGTCGCCATCATCTCGACGGGCTTTGCGCAGGAG GTGAACCGGCGCGATTTCGTGATCAACTGGTCCTTGATGTCGCGCGTGCC GGTGCTTGCCAATCTCGACGCGTTCCAGATCGCGGAAGTGATGCCGCTGT TTCACGCGCACAATGTGCCACCTCGAACAGAAGTCGTCGCTGCCGGGGCG CCAGGGCATGCAATCTATTTCGTCGCAGGTGGCCAGGTGCAGTTCGCGTG CGACGTGCTGGAGTTCACCTACGGCACCGGCGAATTCTTCGGGGTCGGCG CAACCCTGCACAACGACACCCACTACGGTACATTTCGCACGGTCGGCCGT TGCCGGCTACTCAAGCTCTACAAGGAGGATTTCAAGCGGCTGCAGCACAT CGCGCCCGAGGTCGCGCGTCATCTCTACGCTGCTGCCACCGAACGGCAGA AA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9917:323..1474-

>mRNA_P-wetherbeei_contig9917.1.1 ID=mRNA_P-wetherbeei_contig9917.1.1|Name=mRNA_P-wetherbeei_contig9917.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1152bp|location=Sequence derived from alignment at P-wetherbeei_contig9917:323..1474- (Phaeothamnion wetherbeei SAG_119_79)
CCCAACGCGACGCCCCGCCCCACATTCCGCAGACGTGTCTATGAAATCCT
GGAAGGCGCGAAGGACGGCGATAATGCGTCGCTGCTGTTCGACCGGCTGC
TGGTTGCCCTCATCATTCTGAACGTCGCGGCATTCATGGCGGAAACGGTG
CCGTGGATCGAAGCGAAATGCGGCAACTGGCTGTCGTTGTTCGAGACGTT
CTCCGTGACGATGTTCGCGATCGAGTATGTCGCGCGGATCTGGTCGGCCG
TCGAAGTGCCGTATCTCGCGCGTCTGCCGGGCTGGCGGGCGCGGCTGACA
TGGGCGATGCGACCCTACCTGATCATCGATCTGATCGCTGTTTTACCCTA
TTTCCTGCACCATCTGCTCGGATTGGACCTGCGGATCGTGCGCCTGATGC
GCGTGCTGCGACTGTTGCGGTTGTCGCGCTATTCGCCAGCTATGCATACG
CTGGCGCGGGTCGTTTACGGCGAGCGGCGCGCGCTGGTCGGCGCATCGTA
TCTCCTGATCGCCGCGGTTACTTTCGCCGCCACCGGCATCTACTACCTGG
AGCACGAGGCGCAGCCCGACAAGTTTGGTAGTGTTCCCGAAAGTGCGTGG
TGGGCCATCTCGACGCTGACGACGGTCGGCTACGGCGATCTCGTGCCGGT
GACGGCCGGCGGCAAAATCTTTGGTTCGGTGGTGATGGTGTGCGGCCTGT
GCATCCTGGCGCTGCCGGTCGCCATCATCTCGACGGGCTTTGCGCAGGAG
GTGAACCGGCGCGATTTCGTGATCAACTGGTCCTTGATGTCGCGCGTGCC
GGTGCTTGCCAATCTCGACGCGTTCCAGATCGCGGAAGTGATGCCGCTGT
TTCACGCGCACAATGTGCCACCTCGAACAGAAGTCGTCGCTGCCGGGGCG
CCAGGGCATGCAATCTATTTCGTCGCAGGTGGCCAGGTGCAGTTCGCGTG
CGACGTGCTGGAGTTCACCTACGGCACCGGCGAATTCTTCGGGGTCGGCG
CAACCCTGCACAACGACACCCACTACGGTACATTTCGCACGGTCGGCCGT
TGCCGGCTACTCAAGCTCTACAAGGAGGATTTCAAGCGGCTGCAGCACAT
CGCGCCCGAGGTCGCGCGTCATCTCTACGCTGCTGCCACCGAACGGCAGA
AA
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