mRNA_P-wetherbeei_contig9914.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9914.2.1
Unique NamemRNA_P-wetherbeei_contig9914.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9914.2.1 vs. uniprot
Match: A0A7X8XPT5_9BURK (CRISPR-associated endonuclease Cas1 (Fragment) n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XPT5_9BURK)

HSP 1 Score: 330 bits (847), Expect = 7.560e-108
Identity = 175/343 (51.02%), Postives = 229/343 (66.76%), Query Frame = 1
Query:    1 MPIVYVSEQGALVHKNRERLIIRKEGRVMEAVHFADLEQVVLFGNVQVTAPATHALLQRGIDTVFLSKNGRFRGRLQSFEGRNISLRLSQFRRSSEDGFLLDLAARMVRGKIQNCRLVLRRQQQRLKSSTLEENLTRMHASFHRADKVATLDELRGVEGNASALYFSAMREVVVNSELPFNGRNRRPPRDPFNALLSFGYALLLGTVNTCVHTVGLDPFLGALHAPDNGKPSLVLDLMEEFRPLLVDSLVLALVNRGQMRLHDF-------------------RDDREGGISMQRESLKKMILQYESNLQRTVAYAPTGTNLTYREVCLQQARRLARHYEGTD 972
            M ++YV+EQG  VHK   RL++RK G V+E VH  +LEQV+LFGN+Q+TA AT  LLQ GIDTVF+   GR+RGRL S +G+NI LR  QFR++ E+ FLLD+A R VRGK+ NCR +LRR Q++  +  ++  L R++ S        +LDE+RG EG  +A YF     +++    PF GR RRPP+D  NALLSFGY +LLGTV T +  VGLDPFLG+LHA +NGKPSLVLDLMEEFRPLLVD+ VL  +NR QM   DF                   R+D    + ++ ES++K IL YE  L++ V Y P GT +T+R+V L+QARRLARH +  +
Sbjct:    1 MSVLYVTEQGTTVHKLGRRLVVRKLGHVIETVHTFNLEQVILFGNIQLTAQATTFLLQEGIDTVFMGTGGRYRGRLVSGDGKNILLRRQQFRKAEEESFLLDIAQRFVRGKLNNCRTLLRRHQRQRPNDEIQTALLRINHSIRALAGTRSLDEIRGREGAGAAAYFGCFPRLILQEGFPFGGRTRRPPKDAVNALLSFGYTMLLGTVTTAIQVVGLDPFLGSLHAAENGKPSLVLDLMEEFRPLLVDAAVLRAINRRQMVPGDFLYQEDVEMPAELAGDEPPAREDYP--VLLRPESIRKWILVYEQTLRQRVLYPPLGTQITWRQVVLEQARRLARHIKAEE 341          
BLAST of mRNA_P-wetherbeei_contig9914.2.1 vs. uniprot
Match: A0A3M0XJS7_9BACT (CRISPR-associated endonuclease Cas1 n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A3M0XJS7_9BACT)

HSP 1 Score: 285 bits (728), Expect = 8.420e-90
Identity = 158/352 (44.89%), Postives = 220/352 (62.50%), Query Frame = 1
Query:    1 MPIVYVSEQGALVHKNRERLIIRKEGRVMEAVHFADLEQVVLFGNVQVTAPATHA-LLQRGIDTVFLSKNGRFRGRLQSFEGRNISLRLSQFRRSSEDGFLLDLAARMVRGKIQNCRLVLRRQQQRLKSSTLEENLTRMHASFHRADKVATLDELRGVEGNASALYFSAMREVVVNSELPFNGRNRRPPRDPFNALLSFGYALLLGTVNTCVHTVGLDPFLGALHAPDNGKPSLVLDLMEEFRPLLVDSLVLALVNRGQMRLHDF-------------------RDDREGGISMQRESLKKMILQYESNLQRTVAYAPTGTNLTYREVCLQQARRLARHYEGTDNYEAFMPR 996
            M +VY++EQG+ + K  ERLII K+ +V++ +H   LEQ+V+ GNV ++ PAT A LL++GIDTVF+S  G++RGRL S  G+NI LR  QF++  E+   L LA   V GK+ NCR +LRR     + S +   L +MH    + ++V TL  L G+EG A+A+YF     ++   ++ F+GRNRRPP DP N LLS GY LL   + T V+ VGLDP+LG LH+ +NG+PSLVLDLMEEFRP+LVDSLVL L+N+  +RL DF                   RDD    I +    +KK I+ +E+ + + V Y  T   L+YR++CL+Q R L RH  G   Y+ F+ R
Sbjct:    1 MAVVYITEQGSYLTKKGERLIITKQDKVIQQIHAFKLEQIVIIGNVMLS-PATIAFLLKKGIDTVFMSIYGKYRGRLISGFGKNIELRRIQFKKMDEEDDKLSLAKHYVHGKLSNCRTLLRRHNLTYRDSNVTTALHKMHVLLRKINRVDTLMTLMGIEGQAAAIYFGIFGRLIKVRDITFDGRNRRPPLDPVNVLLSLGYTLLENVIQTQVNIVGLDPYLGCLHSVENGRPSLVLDLMEEFRPVLVDSLVLQLINKRIIRLTDFYRPEEQEPAAFDFAETESTRDDLP--ILLTHVGMKKFIIHFENRINQKVFYENTAMRLSYRDICLEQVRLLVRHLRGEAEYKPFIMR 349          
BLAST of mRNA_P-wetherbeei_contig9914.2.1 vs. uniprot
Match: A0A7V3KX23_9DELT (CRISPR-associated endonuclease Cas1 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V3KX23_9DELT)

HSP 1 Score: 277 bits (709), Expect = 6.220e-87
Identity = 156/349 (44.70%), Postives = 212/349 (60.74%), Query Frame = 1
Query:    1 MPIVYVSEQGALVHKNRERLIIRKEGRVMEAVHFADLEQVVLFGNVQVTAPATHALLQRGIDTVFLSKNGRFRGRLQSFEGRNISLRLSQFRRSSEDGFLLDLAARMVRGKIQNCRLVLRRQQQRLKSSTLEENLTRMHASFHRADKVATLDELRGVEGNASALYFSAMREVVVNSELPFNGRNRRPPRDPFNALLSFGYALLLGTVNTCVHTVGLDPFLGALHAPDNGKPSLVLDLMEEFRPLLVDSLVLALVNRGQMRLHDFR--DD-----REGGIS----------MQRESLKKMILQYESNLQRTVAYAPTGTNLTYREVCLQQARRLARHYEGTDNYEAFMPR 996
            M  +YV EQGA V K   R+I+RK G  +++V    +EQ++L GN+Q+T+ A   LL  GIDTVFL+ NG++RGRL S   +NI LR  QF++  E  F+LDLA + V GK+ N R++LRR Q+ ++   +E+ +  +     +      LD LRG+EG+ SA+YFSA+ ++  N E  F  R RRPPRDP N LLSFGY LL  T+ + +   GLDP+LGALH+PD G+PSL LDLMEEFRP+LVD+ VL +VN   + + DF   +D      EG I           +  E  KK I  YE  LQ    Y  T   L+YR++C QQ R L RH +  D Y+ F+ R
Sbjct:    1 MACLYVIEQGAEVTKQGNRIIVRKFGTELQSVPAFKVEQLILMGNIQITSQAIKFLLTEGIDTVFLTINGKYRGRLVSSFSKNIDLRRKQFKKLEEAAFVLDLAKKFVWGKLANYRVLLRRYQKEVQKEAVEKAIHSLRRLIEKVADAPDLDSLRGIEGSGSAIYFSALGQLFKNPEFRFEKRTRRPPRDPVNVLLSFGYTLLGNTIQSYIDLSGLDPYLGALHSPDYGRPSLALDLMEEFRPILVDTAVLRVVNTKAITMKDFYVPEDAPSLPEEGEIEDLTPEDYPILLTYEGTKKWITMYEKRLQELTFYPITEQRLSYRQICEQQVRLLIRHLKEEDIYQPFVLR 349          
BLAST of mRNA_P-wetherbeei_contig9914.2.1 vs. uniprot
Match: A0A7Y8HHX6_9DELT (CRISPR-associated endonuclease Cas1 n=1 Tax=Syntrophaceae bacterium TaxID=2052184 RepID=A0A7Y8HHX6_9DELT)

HSP 1 Score: 276 bits (705), Expect = 2.480e-86
Identity = 153/349 (43.84%), Postives = 207/349 (59.31%), Query Frame = 1
Query:    1 MPIVYVSEQGALVHKNRERLIIRKEGRVMEAVHFADLEQVVLFGNVQVTAPATHALLQRGIDTVFLSKNGRFRGRLQSFEGRNISLRLSQFRRSSEDGFLLDLAARMVRGKIQNCRLVLRRQQQRLKSSTLEENLTRMHASFHRADKVATLDELRGVEGNASALYFSAMREVVVNSELPFNGRNRRPPRDPFNALLSFGYALLLGTVNTCVHTVGLDPFLGALHAPDNGKPSLVLDLMEEFRPLLVDSLVLALVNRGQMRLHDFRDDREGG-----------------ISMQRESLKKMILQYESNLQRTVAYAPTGTNLTYREVCLQQARRLARHYEGTDNYEAFMPR 996
            M  +YV EQGA V K   RL++RK G  +E+V    +EQ++L GN+Q+T+ A   LL  GIDTVFL+ NG++RGRL S   +NI LR  QFR+  +  F+LDLA + V GK+ N R++LRR Q+  ++  +E+ +  +     +      LD LRG+EG+ SA YFSA+  ++   E  F  R RRPPRDP N LLSFGY LL  TV T +   GLDP+LG+LH+PD G+PSL LDLMEEFRP+LVD+++L +VN   + + DF    +                   I +  E  KK I  YE  LQ    Y  T   L+YR+VC QQ R L RH +G   Y+ +  R
Sbjct:    1 MACLYVIEQGAEVTKQGNRLVVRKFGTELESVPAFKVEQLILMGNIQITSQAIKFLLTEGIDTVFLTVNGKYRGRLVSTFSKNIDLRRIQFRKLEDGPFVLDLARKFVEGKLANYRVLLRRYQKENQNEQVEKAIHSLRRLIEKVGDAGDLDGLRGIEGSGSAAYFSALGHLIKVPEFRFEKRTRRPPRDPVNVLLSFGYTLLANTVQTYIDLSGLDPYLGSLHSPDYGRPSLTLDLMEEFRPVLVDTVMLRVVNTRAITMRDFHVPEDSPSLPEEGELEEVTPADYPILLTYEGSKKWITVYEKRLQEATFYPITEQRLSYRQVCEQQVRLLVRHLKGEGTYQPYQLR 349          
BLAST of mRNA_P-wetherbeei_contig9914.2.1 vs. uniprot
Match: F2ND01_DESAR (CRISPR-associated endonuclease Cas1 n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=F2ND01_DESAR)

HSP 1 Score: 273 bits (699), Expect = 1.920e-85
Identity = 152/349 (43.55%), Postives = 212/349 (60.74%), Query Frame = 1
Query:    1 MPIVYVSEQGALVHKNRERLIIRKEGRVMEAVHFADLEQVVLFGNVQVTAPATHALLQRGIDTVFLSKNGRFRGRLQSFEGRNISLRLSQFRRSSEDGFLLDLAARMVRGKIQNCRLVLRRQQQRLKSSTLEENLTRMHASFHRADKVATLDELRGVEGNASALYFSAMREVVVNSELPFNGRNRRPPRDPFNALLSFGYALLLGTVNTCVHTVGLDPFLGALHAPDNGKPSLVLDLMEEFRPLLVDSLVLALVNRGQMRLHDFR--DDREGG---------------ISMQRESLKKMILQYESNLQRTVAYAPTGTNLTYREVCLQQARRLARHYEGTDNYEAFMPR 996
            M I+Y+++QGA + K   RL+I K+G ++  VH   +EQVV+ G VQ++  A   LLQ GIDTVFLS  G++RGRL S  G+NI LR  QF++  + G  L LA   V+GK+ NCR+ LRRQ Q L  + L   + ++    ++AD   +++ L G+EG  +A YF   + +    ++ F+GRNRRPP+DP N LLS GY LL   V T VH  GLDP+LG LH+ + G+PSLVLDLMEEFRP+LVD++V+ +VN+  +R  DF   +DRE                 I +    +KK I  +E+ LQ+ V Y P+G  LTYR++CL+Q R L R       Y  F  R
Sbjct:    1 MSILYLTDQGATLTKKGNRLVIEKKGNLVHWVHAFKVEQVVVMGQVQLSPGAIAFLLQEGIDTVFLSYYGKYRGRLISEFGKNIELRRRQFQKLDDPGIRLALARSYVKGKLNNCRIFLRRQNQGLNQADLTNTIHQLRRLANQADACDSIESLMGMEGAGAASYFGCFQHLFRVDDITFSGRNRRPPQDPVNVLLSLGYTLLANVVQTQVHVAGLDPYLGCLHSVEYGRPSLVLDLMEEFRPVLVDAVVVQVVNKRIIRSTDFYRPEDREPAAFDFAETESRRENYPILLVHTGMKKFITHFEARLQQKVLYLPSGRRLTYRQICLEQVRALVRFLNDGSAYLPFSYR 349          
BLAST of mRNA_P-wetherbeei_contig9914.2.1 vs. uniprot
Match: A0A7C4EVZ4_9DELT (CRISPR-associated endonuclease Cas1 n=1 Tax=Desulfomonile tiedjei TaxID=2358 RepID=A0A7C4EVZ4_9DELT)

HSP 1 Score: 263 bits (672), Expect = 3.020e-81
Identity = 142/347 (40.92%), Postives = 209/347 (60.23%), Query Frame = 1
Query:    7 IVYVSEQGALVHKNRERLIIRKEGRVMEAVHFADLEQVVLFGNVQVTAPATHALLQRGIDTVFLSKNGRFRGRLQSFEGRNISLRLSQFRRSSEDGFLLDLAARMVRGKIQNCRLVLRRQQQRLKSSTLEENLTRMHASFHRADKVATLDELRGVEGNASALYFSAMREVVVNSELPFNGRNRRPPRDPFNALLSFGYALLLGTVNTCVHTVGLDPFLGALHAPDNGKPSLVLDLMEEFRPLLVDSLVLALVNRGQMRL-HDFR-DDREGG---------------ISMQRESLKKMILQYESNLQRTVAYAPTGTNLTYREVCLQQARRLARHYEGTDNYEAFMPR 996
            I+YV++QGA + K   +L++ K+G++++A+H   +EQV + GN+ +T  A   LL+ GIDTVFLS +G+++GRL S +G+NI LR  QF+R  +  F    A   VRGK+ NCR+VLRRQ Q      +   L+R+     + ++  + +++ G+EG  +A YF      + + ++ F  RNRRPP+DP N LLS GY LL   ++T V+ VGLDP+LG LH+ + G+PSLVLDLMEEFRP+LVD+LVL  +NRG ++  H FR ++RE                 I +  E +K+ +  +E  L   V Y P+G  L YR V L+Q RR A        Y  F+ R
Sbjct:   14 ILYVTDQGASLAKRGNQLVVLKQGKIIQAIHAFKVEQVAIMGNISITPSAITFLLEEGIDTVFLSYHGKYKGRLVSQQGKNIELRRKQFQRVDDPKFRFAAAKEFVRGKLTNCRVVLRRQNQTAHDPDVIATLSRIRRFASQLEECTSHEQIMGIEGIGAAAYFGCYGRFIRSQDITFTARNRRPPKDPVNVLLSLGYTLLANAIHTQVNIVGLDPYLGCLHSTEYGRPSLVLDLMEEFRPVLVDALVLYAINRGVIQTKHFFRPEEREPAAFDFAETEPLRDEYPIVLTHEGMKRFVTLFEERLNARVLYEPSGKRLMYRGVLLEQVRRFAALVTDDSPYRCFIMR 360          
BLAST of mRNA_P-wetherbeei_contig9914.2.1 vs. uniprot
Match: A0A7C4ENE8_9PROT (CRISPR-associated endonuclease Cas1 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C4ENE8_9PROT)

HSP 1 Score: 262 bits (670), Expect = 4.710e-81
Identity = 147/349 (42.12%), Postives = 208/349 (59.60%), Query Frame = 1
Query:    1 MPIVYVSEQGALVHKNRERLIIRKEGRVMEAVHFADLEQVVLFGNVQVTAPATHALLQRGIDTVFLSKNGRFRGRLQSFEGRNISLRLSQFRRSSEDGFLLDLAARMVRGKIQNCRLVLRRQQQRLKSSTLEENLTRMHASFHRADKVATLDELRGVEGNASALYFSAMREVVVNSELPFNGRNRRPPRDPFNALLSFGYALLLGTVNTCVHTVGLDPFLGALHAPDNGKPSLVLDLMEEFRPLLVDSLVLALVNRGQMRLHDF-----------RDDREGGI-------SMQRESLKKMILQYESNLQRTVAYAPTGTNLTYREVCLQQARRLARHYEGTDN-YEAFM 990
            M  VY+ EQG+ +HK+  RL+++K  +V++ V  ADLEQ++L GNV +T P    L+   +DTVFLS +GRFRGRL +   +N+ LR  Q+ + S+  F L  A  +V GKI N R+ L R  ++LK   +   + RM  +   A    +++ L G+EG +   YF    +++ N +  FNGRNRRPPRDP NALLSFGY +L   V T ++ VG+DP+LGA H+ + G+PSLV DLMEEFR   VDSLV+ L+N+  +   DF            D+ E  I       SM+RE+LK  +  +E  +  TV Y PTG NLTYR+V + Q R+ AR   G    Y+ F+
Sbjct:    1 METVYIVEQGSQLHKDGYRLLVKKGDKVIDEVKTADLEQIILLGNVIITPPVIDHLIHERVDTVFLSLSGRFRGRLLTQFTKNVLLRQQQYIKFSDADFSLRFARALVVGKINNQRIFLMRHNRKLKDDDIAAAVGRMRIALEEAHGATSVNSLMGIEGMSGRAYFLVFNKLISNEDFVFNGRNRRPPRDPVNALLSFGYTMLANAVETAINIVGMDPYLGAFHSAEYGRPSLVCDLMEEFRAFFVDSLVITLLNKRIVTPQDFIYREVSESDGFLDEDEDRIPEDKLPVSMKRETLKGFVRIFEQKMATTVYYEPTGENLTYRQVIVNQVRQCARLLLGKQQEYKPFI 349          
BLAST of mRNA_P-wetherbeei_contig9914.2.1 vs. uniprot
Match: A0A661KXH8_9DELT (CRISPR-associated endonuclease Cas1 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661KXH8_9DELT)

HSP 1 Score: 260 bits (664), Expect = 3.310e-80
Identity = 138/339 (40.71%), Postives = 209/339 (61.65%), Query Frame = 1
Query:    1 MPIVYVSEQGALVHKNRERLIIRKEGRVMEAVHFADLEQVVLFGNVQVTAPATHALLQRGIDTVFLSKNGRFRGRLQSFEGRNISLRLSQFRRSSEDGFLLDLAARMVRGKIQNCRLVLRR--QQQRLKSSTLEENLTRMHASFHRADKVATLDELRGVEGNASALYFSAMREVVVNSELPFNGRNRRPPRDPFNALLSFGYALLLGTVNTCVHTVGLDPFLGALHAPDNGKPSLVLDLMEEFRPLLVDSLVLALVNRGQMRLHDF-------------RDDREGGISMQRESLKKMILQYESNLQRTVAYAPTGTNLTYREVCLQQARRLARHYEGTD 972
            M +VY+ EQGA + K  ER++++KE  ++  +H   LEQ+V+FGNV +T  A   LL+ GIDTVF+SKNGR++GRLQ    +NI LR  QF R ++  F LD+A  +V GKI N R+++ R  + +  K   LE+++ ++     R  +   +DE+RG+EG ASALYF    +  V+  + F  R RRPP DP NA+LS GY  L   V   +  +GLDP+LGALHA + G+ SL LDLMEE+RP+L+D+LVL++ N   + + DF              D  +  + +  + ++K I+Q+E  +++ + +  TGT+L+YR+   +Q R  ARH +G D
Sbjct:    1 MAVVYIMEQGAYLVKEGERILVKKEKSILHTLHAFKLEQIVIFGNVSITPAAISYLLRLGIDTVFMSKNGRYKGRLQGPYSKNIGLRQKQFERFADPEFCLDIARSIVNGKINNMRVLILRLNRTKNSKDLELEDHIFQLKKLKQRLKEAKDVDEIRGIEGRASALYFEGFSKGFVSHTIEFTKRVRRPPTDPVNAILSLGYTFLFNEVLGAISMIGLDPYLGALHAIEYGRASLALDLMEEWRPVLIDTLVLSMFNLKAIGMQDFTIFKDHIKESDLSEDMPDLPVRLTNDGMRKFIIQFERKMKQKIRHHLTGTHLSYRDCIREQIRHFARHIKGDD 339          
BLAST of mRNA_P-wetherbeei_contig9914.2.1 vs. uniprot
Match: A0A3M1S3B2_9BACT (CRISPR-associated endonuclease Cas1 n=1 Tax=Candidatus Schekmanbacteria bacterium TaxID=2419984 RepID=A0A3M1S3B2_9BACT)

HSP 1 Score: 259 bits (662), Expect = 7.450e-80
Identity = 144/352 (40.91%), Postives = 209/352 (59.38%), Query Frame = 1
Query:    1 MPIVYVSEQGALVHKNRERLIIRKEGRVMEAVHFADLEQVVLFGNVQVTAPATHALLQRGIDTVFLSKNGRFRGRLQSFEGRNISLRLSQFRRSSEDGFLLDLAARMVRGKIQNCRLVLRRQQQRLKSSTLEENLTRMHASFHRADKVATLDELRGVEGNASALYFSAMREVVVNSELPFNGRNRRPPRDPFNALLSFGYALLLGTVNTCVHTVGLDPFLGALHAPDNGKPSLVLDLMEEFRPLLVDSLVLALVNRGQMRLHDF-------------RDDREG------GISMQRESLKKMILQYESNLQRTVAYAPTGTNLTYREVCLQQARRLARHYEGTDN-YEAFMPR 996
            M I+Y+ EQG ++ K   +L+++K   ++ +V    ++QVVLFGN+ +T  A   LL+ GIDTVFL+  GR+RGRL    G+NI LR++QF    +  F L LA R V GK++N R  LRRQ Q LK   ++  + ++     +    +  D LRG+EG  S  YF     ++    + F GRNRRPPRDP NA+LSFGY LL  T+   ++ VGLDP+LG+LH+ + G+PSL LD+MEEFRP+L+DSLVL L+N+  + L +F             +D+ E        + M  E +KK ++ YE  +   V Y   G+ +TY+++CL QAR LA  +   D  YE F+ R
Sbjct:    1 MSILYLIEQGTILSKQSNKLVLKKGKNILLSVPSFKVDQVVLFGNIAITPQAIAFLLKNGIDTVFLTGTGRYRGRLVPELGKNIELRIAQFNCLQDREFALQLATRYVYGKLKNYRTFLRRQNQILKIDDIQSMIHKIRGIMDKIKHSSDFDYLRGLEGIGSKYYFQVFGNLIKQEGIVFEGRNRRPPRDPVNAMLSFGYTLLANTIEGIINCVGLDPYLGSLHSVEYGRPSLTLDIMEEFRPVLIDSLVLKLLNKKIITLKNFYVRRDMDEIYEDNKDESENLTKEDYPVLMTYEGIKKFLIYYEKQMNNKVFYPRLGSRMTYKDICLAQARLLANSFMEKDILYEPFLIR 352          
BLAST of mRNA_P-wetherbeei_contig9914.2.1 vs. uniprot
Match: A0A2M7JUE3_9DELT (CRISPR-associated endonuclease Cas1 n=1 Tax=Deltaproteobacteria bacterium CG_4_8_14_3_um_filter_45_9 TaxID=1973962 RepID=A0A2M7JUE3_9DELT)

HSP 1 Score: 254 bits (650), Expect = 5.430e-78
Identity = 140/348 (40.23%), Postives = 199/348 (57.18%), Query Frame = 1
Query:    1 MPIVYVSEQGALVHKNRERLIIRKEGRVMEAVHFADLEQVVLFGNVQVTAPATHALLQRGIDTVFLSKNGRFRGRLQSFEGRNISLRLSQFRRSSEDGFLLDLAARMVRGKIQNCRLVLRRQQQRLKSSTLEENLTRMHASFHRADKVATLDELRGVEGNASALYFSAMREVVVNSELPFNGRNRRPPRDPFNALLSFGYALLLGTVNTCVHTVGLDPFLGALHAPDNGKPSLVLDLMEEFRPLLVDSLVLALVN------------------RGQMRLHDFRDDREGG------ISMQRESLKKMILQYESNLQRTVAYAPTGTNLTYREVCLQQARRLARHYEGTD 972
            M IVY+ EQ A V K   RL+I+KEG V  ++H   LEQ+VLFGN+ +T  A   LL+ GIDT F+++ GR+ GRLQS  G+NI LR  QFR+  +DGF L  A  +++GK+ N R VL R  ++ ++  L+  +  +     + D+  +LD LRG EG  SA+YF    +  +  +  F GR RRPP DP NALLS GY LL+  V   V  +G DP+ G+LH+ D G+PSL LDLMEE+RP++VD+LVL++ N                   G MR  +  +  E        I +     +K I QYE  + + V Y  TG  ++YR+   +Q R  AR+ +G +
Sbjct:    1 MSIVYLMEQNATVSKEGGRLLIKKEGAVSHSIHLFKLEQIVLFGNIFLTPAAIRYLLKEGIDTAFMTRQGRYLGRLQSALGKNIVLRREQFRKMEDDGFCLKTAKAVIKGKLSNLRTVLMRLNRQRENLELDNEILSLRNLIPKVDEAGSLDTLRGYEGKGSAVYFEGFSKGFLAEDFKFPGRVRRPPTDPINALLSLGYTLLMNQVIAAVGLIGFDPYFGSLHSVDYGRPSLALDLMEEWRPIIVDTLVLSVFNLKALTPSDFEERKPVLAETGSMREEELAESSESAGEGKSAILLTEAGFRKFIAQYERKMGQKVQYHLTGDQISYRDCIREQVRHFARYLKGEE 348          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9914.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XPT5_9BURK7.560e-10851.02CRISPR-associated endonuclease Cas1 (Fragment) n=1... [more]
A0A3M0XJS7_9BACT8.420e-9044.89CRISPR-associated endonuclease Cas1 n=1 Tax=Nitros... [more]
A0A7V3KX23_9DELT6.220e-8744.70CRISPR-associated endonuclease Cas1 n=1 Tax=Deltap... [more]
A0A7Y8HHX6_9DELT2.480e-8643.84CRISPR-associated endonuclease Cas1 n=1 Tax=Syntro... [more]
F2ND01_DESAR1.920e-8543.55CRISPR-associated endonuclease Cas1 n=2 Tax=Deltap... [more]
A0A7C4EVZ4_9DELT3.020e-8140.92CRISPR-associated endonuclease Cas1 n=1 Tax=Desulf... [more]
A0A7C4ENE8_9PROT4.710e-8142.12CRISPR-associated endonuclease Cas1 n=1 Tax=Proteo... [more]
A0A661KXH8_9DELT3.310e-8040.71CRISPR-associated endonuclease Cas1 n=1 Tax=Deltap... [more]
A0A3M1S3B2_9BACT7.450e-8040.91CRISPR-associated endonuclease Cas1 n=1 Tax=Candid... [more]
A0A2M7JUE3_9DELT5.430e-7840.23CRISPR-associated endonuclease Cas1 n=1 Tax=Deltap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9914contigP-wetherbeei_contig9914:752..2019 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog880072.Desac_1734
PFAMsCas_Cas1
Model size1268
Max annot lvl28221|Deltaproteobacteria
KEGG koko:K15342
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.66e-87
EggNOG OGsCOG1518@1|root,COG1518@2|Bacteria,1MUKK@1224|Proteobacteria,42NHJ@68525|delta/epsilon subdivisions,2WNMX@28221|Deltaproteobacteria,2MRPJ@213462|Syntrophobacterales
DescriptionCRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
Cds size999
COG categoryL
BRITEko00000,ko02048,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187116.6768816-CDS-P-wetherbeei_contig9914:751..17501683187116.6768816-CDS-P-wetherbeei_contig9914:751..1750Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9914 752..1750 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187116.6914165-UTR-P-wetherbeei_contig9914:1750..20191683187116.6914165-UTR-P-wetherbeei_contig9914:1750..2019Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig9914 1751..2019 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9914.2.1prot_P-wetherbeei_contig9914.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9914 752..1750 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9914.2.1

>prot_P-wetherbeei_contig9914.2.1 ID=prot_P-wetherbeei_contig9914.2.1|Name=mRNA_P-wetherbeei_contig9914.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=333bp
MPIVYVSEQGALVHKNRERLIIRKEGRVMEAVHFADLEQVVLFGNVQVTA
PATHALLQRGIDTVFLSKNGRFRGRLQSFEGRNISLRLSQFRRSSEDGFL
LDLAARMVRGKIQNCRLVLRRQQQRLKSSTLEENLTRMHASFHRADKVAT
LDELRGVEGNASALYFSAMREVVVNSELPFNGRNRRPPRDPFNALLSFGY
ALLLGTVNTCVHTVGLDPFLGALHAPDNGKPSLVLDLMEEFRPLLVDSLV
LALVNRGQMRLHDFRDDREGGISMQRESLKKMILQYESNLQRTVAYAPTG
TNLTYREVCLQQARRLARHYEGTDNYEAFMPR*
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mRNA from alignment at P-wetherbeei_contig9914:752..2019+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9914.2.1 ID=mRNA_P-wetherbeei_contig9914.2.1|Name=mRNA_P-wetherbeei_contig9914.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1268bp|location=Sequence derived from alignment at P-wetherbeei_contig9914:752..2019+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGATCGTTTACGTGTCCGAGCAAGGGGCACTGGTGCATAAAAACCG GGAGCGGCTGATTATCCGCAAAGAGGGGCGGGTGATGGAGGCTGTTCACT TTGCCGATTTAGAGCAGGTCGTCCTGTTTGGCAATGTCCAGGTTACGGCG CCAGCGACGCACGCGCTCTTGCAGCGGGGGATCGATACGGTTTTCCTTTC CAAGAACGGCCGATTTCGAGGGCGATTGCAGTCGTTTGAGGGTCGCAATA TCTCGCTGCGTTTGAGTCAGTTCCGCCGTTCTAGCGAGGATGGGTTCTTG CTCGACCTGGCTGCGAGGATGGTGCGCGGGAAGATCCAAAATTGCCGCCT GGTGCTACGTCGTCAGCAGCAGCGTCTGAAGAGCTCCACGTTAGAGGAAA ACCTGACCAGGATGCACGCGTCCTTTCATCGGGCCGACAAGGTGGCCACT CTGGATGAGCTCCGCGGTGTCGAGGGAAACGCCTCCGCCCTTTATTTCTC CGCTATGCGTGAGGTCGTCGTGAACTCCGAACTGCCTTTCAACGGGCGGA ACCGTCGGCCCCCGCGCGATCCGTTTAATGCGCTTCTGAGTTTCGGCTAT GCTCTGCTGCTGGGCACGGTGAATACGTGCGTGCATACTGTGGGCCTGGA CCCGTTCCTGGGCGCTCTCCACGCGCCCGATAATGGAAAGCCTTCGCTGG TTCTGGATCTAATGGAAGAGTTCAGGCCTCTACTCGTAGACTCCCTCGTG CTCGCGCTCGTGAATCGCGGCCAGATGCGTCTGCACGACTTTCGCGATGA CCGGGAGGGCGGGATTTCCATGCAGCGAGAGAGTCTTAAGAAGATGATTT TGCAGTATGAGTCCAATCTGCAGCGAACGGTGGCCTATGCTCCGACGGGA ACGAATCTGACGTATCGTGAGGTTTGTCTGCAGCAGGCACGTCGGCTGGC TCGGCACTATGAGGGGACAGACAACTATGAGGCCTTTATGCCGCGATGAT GGTCGTAGTTTCTTACGATGTCTGCGATGACGGGCGGCGCTCGAGGGTAG CCCGTCTGTGCCTGGATTACGGGACGCGGGTCCAGAAGAGCGTTTTCGAG TGTCATCTTGACGACAAGCGCCTGGCGAAACTGATGGAACGAATGGGCAA GCTCATCGATCACGGGGAGGACAGCGTTCGCTATTACTCGCTGTGCAAGA AGTGCTTTTACGCGGTAGAGGTCCAGGGTGAGGGGACTGTCACCCAGGAG ACGGACCTGGTCATTCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9914:752..2019+

>mRNA_P-wetherbeei_contig9914.2.1 ID=mRNA_P-wetherbeei_contig9914.2.1|Name=mRNA_P-wetherbeei_contig9914.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=999bp|location=Sequence derived from alignment at P-wetherbeei_contig9914:752..2019+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGATCGTTTACGTGTCCGAGCAAGGGGCACTGGTGCATAAAAACCG
GGAGCGGCTGATTATCCGCAAAGAGGGGCGGGTGATGGAGGCTGTTCACT
TTGCCGATTTAGAGCAGGTCGTCCTGTTTGGCAATGTCCAGGTTACGGCG
CCAGCGACGCACGCGCTCTTGCAGCGGGGGATCGATACGGTTTTCCTTTC
CAAGAACGGCCGATTTCGAGGGCGATTGCAGTCGTTTGAGGGTCGCAATA
TCTCGCTGCGTTTGAGTCAGTTCCGCCGTTCTAGCGAGGATGGGTTCTTG
CTCGACCTGGCTGCGAGGATGGTGCGCGGGAAGATCCAAAATTGCCGCCT
GGTGCTACGTCGTCAGCAGCAGCGTCTGAAGAGCTCCACGTTAGAGGAAA
ACCTGACCAGGATGCACGCGTCCTTTCATCGGGCCGACAAGGTGGCCACT
CTGGATGAGCTCCGCGGTGTCGAGGGAAACGCCTCCGCCCTTTATTTCTC
CGCTATGCGTGAGGTCGTCGTGAACTCCGAACTGCCTTTCAACGGGCGGA
ACCGTCGGCCCCCGCGCGATCCGTTTAATGCGCTTCTGAGTTTCGGCTAT
GCTCTGCTGCTGGGCACGGTGAATACGTGCGTGCATACTGTGGGCCTGGA
CCCGTTCCTGGGCGCTCTCCACGCGCCCGATAATGGAAAGCCTTCGCTGG
TTCTGGATCTAATGGAAGAGTTCAGGCCTCTACTCGTAGACTCCCTCGTG
CTCGCGCTCGTGAATCGCGGCCAGATGCGTCTGCACGACTTTCGCGATGA
CCGGGAGGGCGGGATTTCCATGCAGCGAGAGAGTCTTAAGAAGATGATTT
TGCAGTATGAGTCCAATCTGCAGCGAACGGTGGCCTATGCTCCGACGGGA
ACGAATCTGACGTATCGTGAGGTTTGTCTGCAGCAGGCACGTCGGCTGGC
TCGGCACTATGAGGGGACAGACAACTATGAGGCCTTTATGCCGCGATGA
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