mRNA_P-wetherbeei_contig991.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig991.1.2
Unique NamemRNA_P-wetherbeei_contig991.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig991.1.2 vs. uniprot
Match: A0A835YRZ2_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ2_9STRA)

HSP 1 Score: 299 bits (765), Expect = 9.640e-92
Identity = 174/377 (46.15%), Postives = 235/377 (62.33%), Query Frame = 1
Query:  187 VVGGGLLVNKKG-DELEKLYRGSPLEKGVDWCGKQIGKLTYTFTKPVSDKLLPDWPPMPNVPPDTPCPPTLVLDLEETLVASVWDPKHGWRSAKRPGVDKFLKELANYYEIAVITAQHAGVADPILTSLD-----------DKGYIMYRLCRESTRFVNGKHVKDLSNLNRDIRRIVVVDKDPECFQLQPENGIVIKPFRIGEGTNPGADRSLELLLPFLKAIAVENVQDVRPLLQQYRGMDANAIGLAYRAHLDEIRAKRAEAQDRGLGGLVR-KRMGAAVASSPDDCAGNRSAIPSSREIVGAVPPPLPADAIAGPSGGAGPAP---------PGAGSARPLPPEKVGGLWRAMRERAKRAEEDQQRKMEAFHNV 1251
            V+GGG L  +   D++  LYR SPL     W   Q+ ++   FT+P SDKLLPDWPP   +PPDTPCPPTLVLDLE TLV   W  + GWR A+RPGV++FL+E++ YYEI + T+ H G A+PI+TSLD             GY  +RL R++T F NG HVKDLS +NRD++ ++++D +PE FQLQP+NGI IKP+ I  G +P AD +L  L+PFL+A+A+E V+D R +L+ +RG D++A+   YR  +D   A + E  + GLGGL+R  + G  V   PD     RSAIPSSR++VGA P    ADA A P+G +   P         P  G A P PPEK G L R  R  ++   E++ RK+E +   
Sbjct:   95 VIGGGALAWRLWHDDIAALYRRSPLHAAGRWVNAQLAEIARPFTEPSSDKLLPDWPPS-ELPPDTPCPPTLVLDLENTLVHMDWHRRTGWRVARRPGVEEFLREMSMYYEIVIFTSAHVGSAEPIVTSLDPAVSRARGVEVSSGYTSHRLYRDATLFSNGTHVKDLSKINRDMKHVIIIDDEPEAFQLQPDNGIRIKPYEIKPGEDPHADTALTDLIPFLRALAMEGVRDYRNVLRPFRGQDSDAVVAEYRRRVDAANAAQRERDNSGLGGLLRGAKRGHLV---PDAQPTRRSAIPSSRDLVGAAP----ADASARPAGRSAAVPAVAVPDVKAPSTGVAPP-PPEKQGSLLRWYRNHSQEIIEERSRKLEKWQET 462          
BLAST of mRNA_P-wetherbeei_contig991.1.2 vs. uniprot
Match: K8YTV0_NANGC (Mitochondrial import inner membrane translocase subunit TIM50 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YTV0_NANGC)

HSP 1 Score: 261 bits (666), Expect = 5.510e-78
Identity = 143/283 (50.53%), Postives = 184/283 (65.02%), Query Frame = 1
Query:  232 EKLYRGSPLEKGVDWCGKQIGKLTYTFTKPVSDKLLPDWPPMPNVPPDTPCPPTLVLDLEETLVASVWDPKHGWRSAKRPGVDKFLKELANYYEIAVITAQHAGVADPILTSLDDKGYIMYRLCRESTRFVNGKHVKDLSNLNRDIRRIVVVDKDPECFQLQPENGIVIKPFRIGEGTNPGADRSLELLLPFLKAIAVENVQDVRP-LLQQYRGMDANAIGLAYRAHLDEIRAKRAEAQDRGLGGLVRKRMGAAVASSPDDCAGNRSAIP------SSREIVG 1059
            + + R SPL +   W    +      F  P  +KLLPDW  +PN+PPD PCPPTLVLDLE+TLV + WDPK+GWR AKRPGVD+ L++L+ YYEI + +  + GV DPI  +LD +G IM+RL ++STRF  GKHVKDLS LNRD+R++V+VD DPE FQ QPENGI IKPFR        ADRSLE L  FL A+ +E V D  P +L+Q++G+DA  IG AY + L   + +  E Q RGLGGL+R   G A  S      GN +  P      S+++IVG
Sbjct:   82 DDVLRASPLGRPYAWLYDAVFS---PFVNPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKYGWRYAKRPGVDRLLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFHQGKHVKDLSKLNRDLRKVVIVDDDPEAFQFQPENGIRIKPFR---NAKDKADRSLEKLRGFLLALVMEGVADDIPAVLRQFQGLDAEQIGDAYASMLRRAQVREIEKQQRGLGGLLRS--GRAFQSMGHGLPGNAARSPAAPTRLSAKDIVG 356          
BLAST of mRNA_P-wetherbeei_contig991.1.2 vs. uniprot
Match: A0A7S2WSD5_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSD5_9STRA)

HSP 1 Score: 239 bits (611), Expect = 1.460e-69
Identity = 141/328 (42.99%), Postives = 189/328 (57.62%), Query Frame = 1
Query:  274 WCGKQIGKLTYTFTKPVSDKLLPDWPPMPNVPPDTPCPPTLVLDLEETLVASVWDPKHGWRSAKRPGVDKFLKELANYYEIAVITAQHAGVADPILTSLDDKGYIMYRLCRESTRFVNGKHVKDLSNLNRDIRRIVVVDKDPECFQLQPENGIVIKPFRIGEGTNPGADRSLELLLPFLKAIAVENVQDVRPLLQQYRGMDANAIGLAYRAHLDEIRAKRAEAQDRGLGGLVRKRMGAAVASSPDDCAGNRSAIPSSREIVGAVPPPLPADAIAGPSGGAGPAPPGAGSA--RPLPPEKVGGLWRAMRERAKRAEEDQQRKMEAFHNV 1251
            W   Q+  ++    KP   KLLPDWP  PN+PPD PCPPTLV+D+E TL  S WDPK+GWR AKRPG D+F+KE+A YYE+   +   AGV DPI+ SLD      ++L REST F  G +VKDLS+LNRD+++++++D DP  FQ QPEN I IKP+      +   D  LE L+PFL A+  E V D   +L+ +R  DA  I  +Y   L  ++ ++ EA  RGLGGL+R         SP D   NR A+P  +  +         D   G +  +  AP    S   RPL  ++ G LW+      K  E +Q++KMEAFH V
Sbjct:  106 WLVLQLETMSAPLFKPAYTKLLPDWPYFPNIPPDVPCPPTLVIDVEGTLCTSTWDPKYGWRHAKRPGADRFIKEMARYYELVFFSNNIAGVGDPIMASLDKDFVTPHKLFRESTTFHQGAYVKDLSHLNRDMKKVLLIDDDPLAFQFQPENAIQIKPYTDAYDRD---DTVLEDLIPFLAAMVNEGVTDFPAVLRNFRSKDAGEIANSYSNLLSSVKQRQEEATTRGLGGLLRN-------LSPQDM--NRLAMPEDQVKI---------DLSQGAAKASVQAPRNEPSVVRRPLESDRKGRLWQRYDGLMKAQEAEQRKKMEAFHEV 412          
BLAST of mRNA_P-wetherbeei_contig991.1.2 vs. uniprot
Match: A0A7S1G064_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G064_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.840e-67
Identity = 121/234 (51.71%), Postives = 163/234 (69.66%), Query Frame = 1
Query:  283 KQIGKLTYTFTKPVSDKLLPDWPPMPNVPPDTPCPPTLVLDLEETLVASVWDPKHGWRSAKRPGVDKFLKELANYYEIAVITAQHAGVADPILTSLDDKGYIMYRLCRESTRFVNGKHVKDLSNLNRDIRRIVVVDKDPECFQLQPENGIVIKPFRIGEGTNPG--ADRSLELLLPFLKAIAVENVQDVRPLLQQYRGMDANAIGLAYRAHLDEIRAKRAEAQDRGLGGLVRKR 978
            K     T  FTKP +DKLLPDWP MPNVPPD PCP TLVLDLE TLV+S WD KHGWR AKRPGVD+FL+++A YYEI + T+   GVA+P++ +LD +  IM+ L RESTRF++G HVKDLS+LNR++++I+ +D D +  QL P+N I +KP+     T+P    D +LE ++P L  I  +   D+  +L+QYRGMDA+ I   Y++ +DEIR  R +    GLG L ++R
Sbjct:  143 KMWDNATEGFTKPHADKLLPDWP-MPNVPPDLPCPHTLVLDLENTLVSSTWDRKHGWRHAKRPGVDQFLRKMAQYYEIVLYTSTIQGVAEPVIQNLDKQQAIMHALYRESTRFIDGVHVKDLSSLNRNVKKIIAIDNDEKALQLHPDNLIRVKPY-----TDPRNRTDDTLEKIMPILIEIVNKGYDDIPAILRQYRGMDADEIVEHYQSRVDEIRKNRDQIYSSGLGWLNQRR 370          
BLAST of mRNA_P-wetherbeei_contig991.1.2 vs. uniprot
Match: F0Y5E2_AURAN (Mitochondrial import inner membrane translocase subunit TIM50 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5E2_AURAN)

HSP 1 Score: 227 bits (579), Expect = 5.560e-65
Identity = 144/361 (39.89%), Postives = 193/361 (53.46%), Query Frame = 1
Query:  187 VVGGGLLVNKKGDELEKLYRGSPLEKGVDWCGKQIGKLTYTFTKPVSDKLLPDWPP-MPNVPPDTPCPPTLVLDLEETLVASVWDPKHGWRSAKRPGVDKFLKELANYYEIAVITAQHAGVADPILTSLDDKGYIMYRLCRESTRFVNGKHVKDLSNLNRDIRRIVVVDKDPECFQLQPENGIVIKPFRIGEGTNPGADRSLELLLPFLKAIAVENVQDVRPLLQQYRGMDANAIGLAYRAHLDEIRAKRAEAQDRGLGGLVRKRMGAAVASSPD---DCAGNR--SAIPSSREIVGAVPPPLPADAIAGPSGGAGPAPPGAGSARPLPPEKVGGLWRAMRERAKRAEEDQQRKMEAFHNV 1251
            V+ GG+       E   L + +       W    + + +  F +P  +KLLPDWPP   N+ PD PCP TLVLDL++TLV + WD ++GWR AKRPG ++FL+E+A YYEI + T   AGVADP++ +LD  G  M+RL R++T FV G H KDLS LNRD+R+IVVVDKD    QLQP N I++KP+          D  LE L PFL A+  ENV+DV   L ++   DA  +   Y   L E + K    +  GLGG VR   G A    PD   + AG    +A  S+++I G  P   P                           K GG++     + K AEEDQ++KMEA+  V
Sbjct:   74 VISGGIYSLMADPEESALAKAAQSSALGGWVVANVSEASKPFVQPSREKLLPDWPPDYLNISPDVPCPHTLVLDLDDTLVRATWDRRYGWRHAKRPGAEQFLREMAKYYEIVIFTTNIAGVADPVVHALDKDGCAMHRLYRDATMFVRGTHCKDLSKLNRDVRKIVVVDKDRAAVQLQPGNAIIVKPYT---DATDRLDTELEDLTPFLAALVNENVRDVPAALAKFSSNDATVVAAEYGDMLKEAKNKTDAVRKIGLGGFVR---GRARQPEPDLALEPAGTMLSAAGLSAKDIAGDAPEATP---------------------------KKGGIFGWWDRKNKEAEEDQKKKMEAWQKV 401          
BLAST of mRNA_P-wetherbeei_contig991.1.2 vs. uniprot
Match: A0A6S8ZNW9_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZNW9_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.270e-64
Identity = 120/241 (49.79%), Postives = 161/241 (66.80%), Query Frame = 1
Query:  250 SPLEKGVDWCGKQ--IGKLTYTFTKPVSDKLLPDWPPMPNVPPDTPCPPTLVLDLEETLVASVWDPKHGWRSAKRPGVDKFLKELANYYEIAVITAQHAGVADPILTSLDDKGYIMYRLCRESTRFVNGKHVKDLSNLNRDIRRIVVVDKDPECFQLQPENGIVIKPFRIGEGTNPGADRSLELLLPFLKAIAVENVQDVRPLLQQYRGMDANAIGLAYRAHLDEIRAKRAEAQDRGLGGL 966
            SP  K  D  G +  IG +T  + +P+++KLLPDW  +PNVPPD PCP TLVLDLE TLV++ WD KHGWR AKRPGVDKFL+E+A YYEI + +    GVA P++ SLD +G I+++L REST ++NG HVKDL++LNR+  RI+V+D  PE  QL PEN I +KP+   +  N   D +L  + PFL   A EN  DV  +L+Q++GMDA+ I   +   +   +A+R     RGLG L
Sbjct:  130 SPPAKFADMIGLKGLIGSITEEYARPMNNKLLPDWNQIPNVPPDMPCPHTLVLDLENTLVSATWDRKHGWRHAKRPGVDKFLQEMAQYYEIVLYSPSIEGVAQPVVVSLDKQGCILHQLYRESTYYMNGVHVKDLNSLNRNTNRIIVLDDSPEEVQLNPENLIRVKPY---DDPNNRDDDTLSRITPFLIECATENY-DVPTVLRQFKGMDADGIADEHERRIASYKAEREAMSMRGLGSL 366          
BLAST of mRNA_P-wetherbeei_contig991.1.2 vs. uniprot
Match: A0A7S2GPP0_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GPP0_9STRA)

HSP 1 Score: 224 bits (572), Expect = 6.350e-64
Identity = 111/233 (47.64%), Postives = 154/233 (66.09%), Query Frame = 1
Query:  274 WCGKQIGKLTYTFTKPVSDKLLPDWPPMPNVPPDTPCPPTLVLDLEETLVASVWDPKHGWRSAKRPGVDKFLKELANYYEIAVITAQHAGVADPILTSLDDKGYIMYRLCRESTRFVNGKHVKDLSNLNRDIRRIVVVDKDPECFQLQPENGIVIKPFRIGEGTNPGADRSLELLLPFLKAIAVENVQDVRPLLQQYRGMDANAIGLAYRAHLDEIRAKRAEAQDRGLGGLVR 972
            W   Q  ++T +FT+P+  KLLPDWP  PN+P DTPCPPTLVLDLE TLV S WD +HGWR AKRPGVDKFL+++A YYEI + +   A + +PI+ SLD +    ++L RE+TR+ NG ++KDLS+LNR ++++V++D D + F LQPENGI I  F+     N   D SL  +  FL A+  E V+D   LL  ++  +A  I   Y + L  I+ +  E ++RGLG LV+
Sbjct:  101 WILAQTSEVTKSFTEPIRQKLLPDWPFFPNIPADTPCPPTLVLDLEGTLVKSTWDRRHGWRHAKRPGVDKFLQDMAQYYEIVLFSNNTASIVEPIMMSLDPENVCWHKLTREATRYENGVYIKDLSHLNRSLKKMVIIDDDEQAFSLQPENGIHINAFKNARDKN---DTSLHDIGKFLAALVHEGVEDFPALLSTFKSRNAEDISNEYLSKLRTIKDREEENRNRGLGRLVK 330          
BLAST of mRNA_P-wetherbeei_contig991.1.2 vs. uniprot
Match: A0A8K1FDJ8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDJ8_PYTOL)

HSP 1 Score: 221 bits (564), Expect = 2.560e-63
Identity = 120/259 (46.33%), Postives = 164/259 (63.32%), Query Frame = 1
Query:  211 NKKGDELEKLYRGSPLEKGVDWCGKQIGKLTYTFTKPVSDKLLPDWPPMPNVPPDTPCPPTLVLDLEETLVASVWDPKHGWRSAKRPGVDKFLKELANYYEIAVITAQHAGVADPILTSLDDKGYIMYRLCRESTRFVNGKHVKDLSNLNRDIRRIVVVDKDPECFQLQPENGIVIKPFRIGEGTNPGADRSLELLLPFLKAIAVENVQDVRPLLQQYRGMDA--NAIGLAYRAHLDEIRAKRAEAQDRGLGGLVRKRM 981
            N+ GD L   + G        +   QI +L   +T+P  +KLLPDWP +P VPPDTP  P LVLDLE+TLV S W  KHGWR AKRPGVD+FL+ LA YYEI V +  H  +A+ IL  LD K  +++ L RESTR+ N  HVKDLS LNRD+R++V++D DP  +QLQP+N I IK +   +G + G D  L+ L+PFLKA+A E V D R +L ++R  D     +   Y A +  +  ++ + + +GLGG +R R+
Sbjct:  114 NQIGDTLGATFLGDI----YTFFANQIAELAKPYTEPSKEKLLPDWP-IPQVPPDTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLEALAQYYEIVVFSQNHMYMAEEILVKLDRKQNVLHLLARESTRYFNSAHVKDLSKLNRDLRQVVIIDDDPSAYQLQPDNAIPIKAYT--DGRDRG-DHELKDLIPFLKALASERVGDFRSVLAEFRDEDGVIRDLPTKYGARVRALEMQKEQEKQKGLGGFIRGRL 364          
BLAST of mRNA_P-wetherbeei_contig991.1.2 vs. uniprot
Match: D8LBI3_ECTSI (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI3_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 2.510e-62
Identity = 143/383 (37.34%), Postives = 213/383 (55.61%), Query Frame = 1
Query:  154 GKVLGAAAAVGVVGGGLLVNKKGDELEKLYRGSPLEKGVDWCGKQIGKLTYTFTKPVSDKLLPDWPPMPNVPPDTPCPPTLVLDLEETLVASVWDPKHGWRSAKRPGVDKFLKELANYYEIAVITAQHAGVADPILTSLDDKGYIMYRLCRESTRFVNGKHVKDLSNLNRDIRRIVVVDKDPECFQLQPENGIVIKPFRIGEGTNPGADRSLELLLPFLKAIAVENVQDVRPLLQQYRGMDANAIGLAYRAHLDEIRAKRAEAQDRGLGGLVRKRMGAAVASSPDDCAGNRSAIPSSREIVGAVPPPLPADAIAGPSGGAGPAPPGAGSA-----------------RPLPPEKVGGLWRAMRERAKRAEEDQQRKMEAFHNV 1251
            G  L A  +VG+   G+    K DE+ KL   SP++    W    +GK    ++ PV DKLL D P    +PP    PPTLVLDLE TL+ +++  K GWR AKRPG+D FLKE++  YEI V T    G+AD  +T +D +G I  R+ R+ TR+++GK+VKDLS LNR + + +++D + +C  +QPEN I +K F + +G++P AD +L  L PFL+A+A + V D R +L+ + G D+NA+   +R+ ++ +R K    + +GLGGLVR+      A  P   A     + +S++IVG  P  L                PG  +A                 +PL  ++ GGLW++++E  K  EED  R+ EAF  V
Sbjct:  172 GTKLVAGTSVGLAALGIAWQLKPDEMRKLLDDSPIDHFFIWF---MGKWAL-YSSPVKDKLLLDCP----LPPGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLEDGSDPTADTALYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVADFRSKVNAVRQKEDAEKSKGLGGLVRQIAPVVGAGGP---AAGMGGMLTSKDIVGDAPETLS---------------PGMAAAXXXXXXXXXXXXXXXGSKPLAEKQKGGLWKSLQEGNKEREEDFMRRNEAFQRV 528          
BLAST of mRNA_P-wetherbeei_contig991.1.2 vs. uniprot
Match: A0A7S3L405_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L405_9STRA)

HSP 1 Score: 220 bits (561), Expect = 6.850e-62
Identity = 137/321 (42.68%), Postives = 179/321 (55.76%), Query Frame = 1
Query:  289 IGKLTYTFTKPVSDKLLPDWPPMPNVPPDTPCPPTLVLDLEETLVASVWDPKHGWRSAKRPGVDKFLKELANYYEIAVITAQHAGVADPILTSLDDKGYIMYRLCRESTRFVNGKHVKDLSNLNRDIRRIVVVDKDPECFQLQPENGIVIKPFRIGEGTNPGADRSLELLLPFLKAIAVENVQDVRPLLQQYRGMDANAIGLAYRAHLDEIRAKRAEAQDRGLGGLVRKRMGAAVASSPDDCAGNRSAIPSSREIVGAVPPPLPADAIAGPSGGAGPAPPGAGSARPLPPEKVGGLWRAMRERAKRAEEDQQRKMEAFHNV 1251
            IG  T   + PV DKLLPDW  MP++P D P P TLVLDLE+TLV+S WD K+GWR AKRPGVDKFL+++A YYEI + +    GVA P++ SLD  GYI +RL R++T + NG HVKDL  LNR+I+R+VV+D D    Q  PEN I +KP+   +      D +L  + PFL  IA ENVQDV  +L+Q+ GMDA+A+   +   L E++  R   Q  GLG L R          P     N +   ++R+I                   AG  PPG     P       GL   +  RAK  EE   RK+E ++ V
Sbjct:  149 IGSYTSQISAPVYDKLLPDWADMPDMPQDIPIPHTLVLDLEKTLVSSSWDRKYGWRHAKRPGVDKFLRDMAQYYEIVLYSPSIDGVAIPVVESLDKDGYIRHRLFRDATHYHNGVHVKDLKRLNRNIKRMVVIDDDLAEVQFNPENVIRVKPY---DDPTDRTDDTLARITPFLIEIARENVQDVPAVLRQFAGMDADALASEHERRLQELQRHR---QTHGLGSLRRGPALPEPELPPASLTPNATPQLTARQI-------------------AGQGPPGGXXGGPQLDVDAPGLMGVLNRRAKEKEEQNMRKLEKWNQV 444          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig991.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRZ2_9STRA9.640e-9246.15Mitochondrial import inner membrane translocase su... [more]
K8YTV0_NANGC5.510e-7850.53Mitochondrial import inner membrane translocase su... [more]
A0A7S2WSD5_9STRA1.460e-6942.99Mitochondrial import inner membrane translocase su... [more]
A0A7S1G064_9STRA1.840e-6751.71Mitochondrial import inner membrane translocase su... [more]
F0Y5E2_AURAN5.560e-6539.89Mitochondrial import inner membrane translocase su... [more]
A0A6S8ZNW9_9STRA1.270e-6449.79Mitochondrial import inner membrane translocase su... [more]
A0A7S2GPP0_9STRA6.350e-6447.64Mitochondrial import inner membrane translocase su... [more]
A0A8K1FDJ8_PYTOL2.560e-6346.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D8LBI3_ECTSI2.510e-6237.34Mitochondrial import inner membrane translocase su... [more]
A0A7S3L405_9STRA6.850e-6242.68Mitochondrial import inner membrane translocase su... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig991contigP-wetherbeei_contig991:483..3388 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009035542.1
Preferred nameTIMM50
PFAMsNIF
Model size1710
Max annot lvl2759|Eukaryota
KEGG koko:K17496
KEGG TC3.A.8.1
Hectar predicted targeting categoryother localisation
GOsGO:0001836,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0004725,GO:0005048,GO:0005102,GO:0005126,GO:0005134,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005744,GO:0005886,GO:0006464,GO:0006470,GO:0006605,GO:0006626,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006839,GO:0006886,GO:0006915,GO:0006996,GO:0007005,GO:0007006,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009987,GO:0012501,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016311,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016791,GO:0017038,GO:0019538,GO:0019866,GO:0023052,GO:0030150,GO:0030943,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0035335,GO:0036211,GO:0042277,GO:0042578,GO:0042886,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044451,GO:0044455,GO:0044464,GO:0044743,GO:0044877,GO:0045184,GO:0046902,GO:0046907,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055085,GO:0061024,GO:0065002,GO:0065007,GO:0065008,GO:0070013,GO:0070585,GO:0070727,GO:0070851,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072655,GO:0090559,GO:0097190,GO:0098796,GO:0098798,GO:0098800,GO:0140096,GO:1901564,GO:1990542
Exons5
Evalue1.61e-67
EggNOG OGsCOG5190@1|root,KOG2832@2759|Eukaryota
Ec32 ortholog descriptionTim50 homolog, mitochondrial inner membrane protein of TIM23 complex
Ec32 orthologEc-27_003880.1
Descriptionprotein import into mitochondrial matrix
Cds size1245
COG categoryK
BRITEko00000,ko02000,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig991.1.2prot_P-wetherbeei_contig991.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig991 546..2986 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187116.2652755-UTR-P-wetherbeei_contig991:482..5451683187116.2652755-UTR-P-wetherbeei_contig991:482..545Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig991 483..545 +
1683187116.336414-UTR-P-wetherbeei_contig991:2986..33881683187116.336414-UTR-P-wetherbeei_contig991:2986..3388Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig991 2987..3388 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187116.2772186-CDS-P-wetherbeei_contig991:545..10611683187116.2772186-CDS-P-wetherbeei_contig991:545..1061Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig991 546..1061 +
1683187116.2861536-CDS-P-wetherbeei_contig991:1410..15151683187116.2861536-CDS-P-wetherbeei_contig991:1410..1515Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig991 1411..1515 +
1683187116.2955947-CDS-P-wetherbeei_contig991:1811..19091683187116.2955947-CDS-P-wetherbeei_contig991:1811..1909Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig991 1812..1909 +
1683187116.305904-CDS-P-wetherbeei_contig991:2106..22271683187116.305904-CDS-P-wetherbeei_contig991:2106..2227Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig991 2107..2227 +
1683187116.3160217-CDS-P-wetherbeei_contig991:2581..29861683187116.3160217-CDS-P-wetherbeei_contig991:2581..2986Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig991 2582..2986 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig991.1.2

>prot_P-wetherbeei_contig991.1.2 ID=prot_P-wetherbeei_contig991.1.2|Name=mRNA_P-wetherbeei_contig991.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=415bp
MLAARRARRALRENVETSGGSGTGARKNSSGKVLGAAAAVGVVGGGLLVN
KKGDELEKLYRGSPLEKGVDWCGKQIGKLTYTFTKPVSDKLLPDWPPMPN
VPPDTPCPPTLVLDLEETLVASVWDPKHGWRSAKRPGVDKFLKELANYYE
IAVITAQHAGVADPILTSLDDKGYIMYRLCRESTRFVNGKHVKDLSNLNR
DIRRIVVVDKDPECFQLQPENGIVIKPFRIGEGTNPGADRSLELLLPFLK
AIAVENVQDVRPLLQQYRGMDANAIGLAYRAHLDEIRAKRAEAQDRGLGG
LVRKRMGAAVASSPDDCAGNRSAIPSSREIVGAVPPPLPADAIAGPSGGA
GPAPPGAGSARPLPPEKVGGLWRAMRERAKRAEEDQQRKMEAFHNVMMKK
EEQRKSKAAAAEST*
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mRNA from alignment at P-wetherbeei_contig991:483..3388+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig991.1.2 ID=mRNA_P-wetherbeei_contig991.1.2|Name=mRNA_P-wetherbeei_contig991.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2906bp|location=Sequence derived from alignment at P-wetherbeei_contig991:483..3388+ (Phaeothamnion wetherbeei SAG_119_79)
GCGTCGAGAACGCCGCCGGCGGCCAGGATAACAACAGCCCCTCCTGTAGA GAGTGCGAGCGACATGCTGGCGGCGCGACGGGCACGACGAGCGCTGCGCG AGAACGTCGAAACATCTGGGGGAAGCGGTACGGGCGCCCGCAAAAACTCG AGCGGCAAGGTCCTTGGCGCTGCAGCGGCGGTGGGGGTGGTCGGCGGCGG CCTCCTCGTGAACAAGAAGGGCGACGAGCTCGAAAAGCTGTACCGCGGCT CGCCGCTAGAAAAGGGGGTCGACTGGTGCGGAAAGCAGATCGGAAAGCTC ACGTACACGTTCACCAAACCCGTGAGCGACAAGCTGCTTCCGGACTGGCC TCCGATGCCCAACGTGCCGCCGGACACGCCGTGCCCGCCGACGCTCGTGC TGGACTTGGAGGAGACGCTCGTCGCCTCCGTATGGGATCCGAAGCACGGC TGGCGCTCGGCGAAGCGGCCGGGTGTCGACAAGTTTTTGAAGGAGCTCGC AAATTACTACGAGATTGCCGTCATCACCGCGCAGCATGCCGGCGTCGCCG ACCCCATCCTCACCAGCCTCGACGACAAGGTGAAATTTGACGTTCTTTTT GACCGTTACCTGTTTTGGTATTTTCTTGTAGTTGAGTCTGCTCCTCGCTG CTGTTCCTTCTCTTGGTCTTTCTTTCCTTTTGCCGGGCCGAGACGGCGGC AGGGGCTTGAAATCCTTGCTTGCTATTGGCGAGCTTTGGCCCTTGGCGCC GTGTCGCTTTTAAACTCGTGACGTCGGCCAAATCGCCTGGCACACAAAAA GTCCGCTTCCAGCTTTCCCTTCTCCACTTCAAGGAAAAGTGCGCTTTTTC TTCACCGGCAGGCGCCACGCCTTCCATGCATTTTGTTGCTGAAGGATTCG CCGCGTTCGCCTGCTTCGCCTTCCGCAGGGCTACATAATGTACCGGCTGT GCCGCGAGTCGACACGGTTTGTCAACGGGAAGCACGTCAAGGACCTCTCC AACCTCAACCGTGACATCCGCCGCATCGTCGTGGTGAGCGGGTGGGATTG GCGCGAAACTTGGAAGCCTGGAGAGGAAAAATGGCCGAGGCCTTTTCGGC TTGTGCAGTGCGTAAGTATTGTTGGGGTTTGTGACCCGCCGGAAGTTTTT CTCCCAGTTTCAACAGGCTTTGAGCGTACATTTTCTTCCACCCTGCCTCC TTCTCGCTGTNNNNNNNNNNCCTATTTCTTCAACTCTCTTATCAAGTCGA TGTTTGTCACCATAACTTTCCTTTCTGATCTCTTCCTCTTGCTCCGTTTC CATCTTTGTTCTTCGCTGTTTTTACGCAGGTGGACAAGGACCCCGAGTGC TTCCAGCTGCAGCCGGAGAACGGCATCGTCATCAAGCCCTTCCGGATCGG CGAAGGCACCAACCCGGGAGCCGACAGGTACGGTTACGGTTACAAGCGGA CGGTTATGGACAGACTGTTTTGGACGGATGTAAGCGCGCTCTTGCAACAA AACGTCGGAGGGTGAAGTCGGAGAGTCCCCATGTTACCTACCGGCCTTTG CTTCCGTGCTCTCCACCTGAACCCCAACCTGCCATGCATTGCTGCTTCTC TACTCTGAACTTCTCGACAAAAAGGTCCCTGGAGCTGTTGCTGCCGTTTC TGAAGGCCATCGCCGTGGAGAATGTGCAGGACGTGCGGCCGCTGTTGCAG CAATACCGGGGAATGGACGCCAATGCCATCGGGCTTGCCTACCGGGTTAG TTGTCAGCTGCTGGTTCTCTTTGGTTGTCGTGATGCCAATTCTTTTTGGG GACCGCACGTTGCTTTCTTTGGCGCTGGTCTTGCTCCGACTATTGCGGCT CCTTTCATCGCTCGCAGCTTCCGTTGCGGTATTCGCCTCTATATCTTGAA AACATCGTCGTGGTGTTTTGAGAGAATAGCAATGGCACGAATTTCTGAGG CTCTTAAGCATCGTGCGGAAAGTACCGATCCGAAAGACGTTTCCGGGAAG CTTCCTTGGTGCTTGAATCGATTTCGCGACGAACGCTTTTCTTTCATTCT TGTTCTGACTTCGTCGTCATTGGGCTGCGGTGCGCTTTATGCTGTTCAGG CCCACCTCGATGAGATACGGGCAAAGCGCGCCGAGGCGCAGGACCGCGGC CTCGGCGGGCTGGTCCGCAAGCGGATGGGCGCCGCCGTGGCGTCATCCCC CGACGATTGCGCCGGCAACCGCAGCGCCATTCCCAGCAGCCGCGAGATCG TGGGCGCCGTGCCGCCGCCGCTGCCGGCAGACGCTATCGCGGGCCCAAGT GGTGGCGCGGGGCCGGCGCCACCGGGGGCGGGGAGCGCGAGGCCGCTGCC GCCGGAGAAGGTGGGCGGGCTGTGGCGGGCGATGCGGGAGCGGGCGAAGC GGGCGGAGGAGGACCAGCAGCGCAAGATGGAGGCGTTCCACAACGTCATG ATGAAGAAGGAGGAGCAGCGCAAGAGCAAGGCGGCCGCCGCCGAGTCGAC GTGACCGGTCGAACGGATTGAAAGGCGTCGTGGCGGAACGAAACTGTTTC CGCCCTTGTAAGATTACAAATAGTGTAACCGAGTCGATGAATGAATGCAC TAGGCGCTGTTGCATGTGTTGTGTTACTTTGTCCTCTTAAGCGACAGCTG TGGGCGCAACGACGTTTAAGCAGTACTGACCCTAAAAATTATTATTTCCA CTCTCCCGTTTCACTAAAGTGCTTTTTAAAGCTGGATTATTTGATGTGGC GGCGCACAGCCTCATCCCAGCGGCCGCCGCTGACACACAGCGATTCTTCC TCCTCCTCGCCGCCGCCAAACTCCGTAATGGCCGCCTCCAGTAGCGCCAG CGACGTGGCGTGCGCGTCGTACGTTTCGGGACCCTTCTCTTTCTTCTTGC TCCGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig991:483..3388+

>mRNA_P-wetherbeei_contig991.1.2 ID=mRNA_P-wetherbeei_contig991.1.2|Name=mRNA_P-wetherbeei_contig991.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1245bp|location=Sequence derived from alignment at P-wetherbeei_contig991:483..3388+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGCGGCGCGACGGGCACGACGAGCGCTGCGCGAGAACGTCGAAAC
ATCTGGGGGAAGCGGTACGGGCGCCCGCAAAAACTCGAGCGGCAAGGTCC
TTGGCGCTGCAGCGGCGGTGGGGGTGGTCGGCGGCGGCCTCCTCGTGAAC
AAGAAGGGCGACGAGCTCGAAAAGCTGTACCGCGGCTCGCCGCTAGAAAA
GGGGGTCGACTGGTGCGGAAAGCAGATCGGAAAGCTCACGTACACGTTCA
CCAAACCCGTGAGCGACAAGCTGCTTCCGGACTGGCCTCCGATGCCCAAC
GTGCCGCCGGACACGCCGTGCCCGCCGACGCTCGTGCTGGACTTGGAGGA
GACGCTCGTCGCCTCCGTATGGGATCCGAAGCACGGCTGGCGCTCGGCGA
AGCGGCCGGGTGTCGACAAGTTTTTGAAGGAGCTCGCAAATTACTACGAG
ATTGCCGTCATCACCGCGCAGCATGCCGGCGTCGCCGACCCCATCCTCAC
CAGCCTCGACGACAAGGGCTACATAATGTACCGGCTGTGCCGCGAGTCGA
CACGGTTTGTCAACGGGAAGCACGTCAAGGACCTCTCCAACCTCAACCGT
GACATCCGCCGCATCGTCGTGGTGGACAAGGACCCCGAGTGCTTCCAGCT
GCAGCCGGAGAACGGCATCGTCATCAAGCCCTTCCGGATCGGCGAAGGCA
CCAACCCGGGAGCCGACAGGTCCCTGGAGCTGTTGCTGCCGTTTCTGAAG
GCCATCGCCGTGGAGAATGTGCAGGACGTGCGGCCGCTGTTGCAGCAATA
CCGGGGAATGGACGCCAATGCCATCGGGCTTGCCTACCGGGCCCACCTCG
ATGAGATACGGGCAAAGCGCGCCGAGGCGCAGGACCGCGGCCTCGGCGGG
CTGGTCCGCAAGCGGATGGGCGCCGCCGTGGCGTCATCCCCCGACGATTG
CGCCGGCAACCGCAGCGCCATTCCCAGCAGCCGCGAGATCGTGGGCGCCG
TGCCGCCGCCGCTGCCGGCAGACGCTATCGCGGGCCCAAGTGGTGGCGCG
GGGCCGGCGCCACCGGGGGCGGGGAGCGCGAGGCCGCTGCCGCCGGAGAA
GGTGGGCGGGCTGTGGCGGGCGATGCGGGAGCGGGCGAAGCGGGCGGAGG
AGGACCAGCAGCGCAAGATGGAGGCGTTCCACAACGTCATGATGAAGAAG
GAGGAGCAGCGCAAGAGCAAGGCGGCCGCCGCCGAGTCGACGTGA
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