mRNA_P-wetherbeei_contig9899.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9899.1.1 vs. uniprot
Match: D8LQ47_ECTSI (APPLE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ47_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 6.420e-20 Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 1 LVVGGTDGSGTRGVVALLQRLGVPMVIEDYGTLDVH-ASYMVKGGWPEAVRPVLQLTHSPQYAVCDVEAPVREATLRAV---KVLAEKMRASS 267 L+VGG+DGSGTRGVVALLQRL VPMV+ED GT+DVH A YMVKGGWP VRPV+ Y A +R T A+ KV +KM S Sbjct: 26 LIVGGSDGSGTRGVVALLQRLKVPMVVEDRGTMDVHGAPYMVKGGWPAVVRPVIGWAKGAGYESRGAPAQLRRKTFDALGGLKVQMQKMAGKS 118
BLAST of mRNA_P-wetherbeei_contig9899.1.1 vs. uniprot
Match: A0A6H5L0U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0U6_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 6.420e-18 Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 1 LVVGGTDGSGTRGVVALLQRLGVPMVIEDYGTLDVH-ASYMVKGGWPEAVRPVLQLTHSPQYAVCDVEAPVREATLRAVKVLAEKM 255 L+VGG+DGSGTRGVVALLQ+L VPMV+ED GT+DVH A YM KGGWP V PV+ Y A +R T A+ L +M Sbjct: 26 LIVGGSDGSGTRGVVALLQQLKVPMVVEDRGTMDVHGAPYMDKGGWPAVVSPVIGWAKGTGYESRSAPAQLRRKTFDALGGLKAQM 111
BLAST of mRNA_P-wetherbeei_contig9899.1.1 vs. uniprot
Match: A0A482SCK3_9ARCH (APPLE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCK3_9ARCH) HSP 1 Score: 75.5 bits (184), Expect = 5.560e-14 Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 LVVGGTDGSGTRGVVALLQRLGVPMVIEDYGTLDVHASYMVKGGWPEAVRPVLQLTHSPQYAVCDVEAPVREATLRAVKVLAEKMRASS 267 L+VGGTDGSGTR VV +L LGV MV ED T D+HA + GWP V+PVL+ TH+ Y D+ V + T+ AV+ + E+ + S Sbjct: 127 LIVGGTDGSGTRRVVQVLTDLGVTMVSEDPETYDIHADLV--SGWPPVVKPVLKHTHTLNYKPEDLPKHVNQQTIAAVRKITEQAQKDS 213
BLAST of mRNA_P-wetherbeei_contig9899.1.1 vs. uniprot
Match: A0A7S2TNP4_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TNP4_9EUKA) HSP 1 Score: 72.4 bits (176), Expect = 6.730e-13 Identity = 41/86 (47.67%), Postives = 51/86 (59.30%), Query Frame = 1 Query: 1 LVVGGTDGSGTRGVVALLQRLGVPMVIEDYGTLDVHASYMVKGGWPEAVRPVLQLTHSPQYAVCDVEAPVREATLRAVKVLAEKMR 258 ++VGGTDGSGTR VV LL L V MV +D T DVHA M GGWP VR L+ +H Y D+ R R++K A+KM+ Sbjct: 230 IIVGGTDGSGTRAVVTLLSNLNVLMVKDDACTFDVHAGEM--GGWPPVVRRALRFSHGANYKPEDIPENDRAYLRRSLKRFADKMK 313
BLAST of mRNA_P-wetherbeei_contig9899.1.1 vs. uniprot
Match: A0A1Z5JYM4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYM4_FISSO) HSP 1 Score: 68.2 bits (165), Expect = 2.020e-11 Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 1 Query: 1 LVVGGTDGSGTRGVVALLQRLGVPMVIEDYGTLDVHASYMVKG-GWPEAVRPVLQLTHSPQYAVCDVEAPVRE 216 L++GG+DGSGTR V +L L VPM+++D TLD+HA G GWP V V+ THS +Y D+ V++ Sbjct: 12 LIIGGSDGSGTRAFVDVLGHLHVPMLVDDKATLDIHAPCFYHGDGWPHLVNRVMNETHSARYEFSDLSPSVQD 84
BLAST of mRNA_P-wetherbeei_contig9899.1.1 vs. uniprot
Match: A0A7R9WRJ1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRJ1_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 2.550e-10 Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 1 Query: 1 LVVGGTDGSGTRGVVALLQRLGVPMVIEDYGTLDVHASYMVKGGWPEAVRPVL 159 LV+ GTDGSGTRGV A+LQ+LGVP+V++D+ LDVHA+ + GGW VR L Sbjct: 63 LVMVGTDGSGTRGVAAILQQLGVPLVVDDFVQLDVHAASI--GGWTPLVRSAL 113
BLAST of mRNA_P-wetherbeei_contig9899.1.1 vs. uniprot
Match: A0A1E7EYM7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EYM7_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 3.750e-8 Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 LVVGGTDGSGTRGVVALLQR-LGVPMVIEDYGTLDVHASYMV-KGGWPEAVRPVLQLTH 171 L+VGG+DGSGTRG+V +L+ L V +IED TLDVH M K GWPE V VL +T+ Sbjct: 135 LLVGGSDGSGTRGMVDILKNELYVDFIIEDPATLDVHGQIMYDKRGWPELVLQVLNVTN 193
BLAST of mRNA_P-wetherbeei_contig9899.1.1 vs. uniprot
Match: A0A1E7ESZ3_9STRA (Rhodanese domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ESZ3_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.670e-6 Identity = 25/52 (48.08%), Postives = 38/52 (73.08%), Query Frame = 1 Query: 1 LVVGGTDGSGTRGVVALLQRLGVPMVIEDYGTLDVHASYMVKGGWPEAVRPV 156 +++GG+DGSGTR +V LL+ LG ++ +D T DVHAS ++K GWP ++ V Sbjct: 32 VMIGGSDGSGTRAIVELLRELGTIIISDDPQTFDVHAS-ILKNGWPGFIQRV 82
BLAST of mRNA_P-wetherbeei_contig9899.1.1 vs. uniprot
Match: A0A448ZPV2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZPV2_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 5.520e-6 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 1 Query: 1 LVVGGTDGSGTRGVVALLQRLGVPMVIEDYGTLDVHASYMVKGGWPEAVRPV 156 L+VGG+DGSGTR V L+ LG ++ ED + DVHA+ + GGWPE + + Sbjct: 111 LLVGGSDGSGTRAFVQTLRELGTTIISEDKYSFDVHANEI--GGWPELIEEI 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9899.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9899.1.1 >prot_P-wetherbeei_contig9899.1.1 ID=prot_P-wetherbeei_contig9899.1.1|Name=mRNA_P-wetherbeei_contig9899.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=89bp LVVGGTDGSGTRGVVALLQRLGVPMVIEDYGTLDVHASYMVKGGWPEAVRback to top mRNA from alignment at P-wetherbeei_contig9899:4..270- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9899.1.1 ID=mRNA_P-wetherbeei_contig9899.1.1|Name=mRNA_P-wetherbeei_contig9899.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=267bp|location=Sequence derived from alignment at P-wetherbeei_contig9899:4..270- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9899:4..270- >mRNA_P-wetherbeei_contig9899.1.1 ID=mRNA_P-wetherbeei_contig9899.1.1|Name=mRNA_P-wetherbeei_contig9899.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=267bp|location=Sequence derived from alignment at P-wetherbeei_contig9899:4..270- (Phaeothamnion wetherbeei SAG_119_79)back to top |