mRNA_P-wetherbeei_contig9896.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: D7G250_ECTSI (AAA_23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G250_ECTSI) HSP 1 Score: 308 bits (789), Expect = 2.400e-100 Identity = 160/251 (63.75%), Postives = 194/251 (77.29%), Query Frame = 1 Query: 1 HFSAQTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAENYESVLERLQEQYMTLKHEAATIDTRINELHERQKEYSAKSREVR 753 H Q IEFY+PLTMIVG NGCGKTTIIECLK ACTG+LPPG+RNGQSF+HDPK+SG +VKA+IKLRF A+ VVIRSFQL+QK+ L FKALDGVIRTK+++ G+ +SINHKC+E+DK +P +GVS AI+ENV+FCHQE++SWPLQEGAVVKKKFDDIFES+RYTKALD IKK KQEYA VKEL+ DL L+ AA + + ++ E Y TL+ E ID R EL E ++ A + EVR Sbjct: 17 HEREQVIEFYTPLTMIVGANGCGKTTIIECLKYACTGALPPGARNGQSFVHDPKVSGTNEVKANIKLRFSARDKTVGVVIRSFQLTQKRKTLQFKALDGVIRTKNES-GQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYSTLRQEIEAIDARTAELSESLEKLRAVADEVR 266
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: A0A7S4KCM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCM0_9STRA) HSP 1 Score: 262 bits (669), Expect = 1.040e-82 Identity = 126/239 (52.72%), Postives = 176/239 (73.64%), Query Frame = 1 Query: 13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAENYESVLERLQEQYMTLKHEAATIDTRINELHERQKEY 729 Q I FYSPLT+IVG NGCGKTTIIE L+ A G+LPPG+R+GQ+F+HDPK +G VKA+IKLRF + G MVV+RS +L+QKKT + FKALDG++RT D TGE+++++HKC ELD+Q+P +GVS I+E+V+F HQE+SSWPLQ+ A +K+KFDDIF+S+RY KAL+ I+K + EYA KE +++L GL +HK AAE + + +++ + + A D I E++ +Y Sbjct: 22 QVISFYSPLTVIVGNNGCGKTTIIESLRYAVAGTLPPGTRSGQAFVHDPKSAGQTSVKANIKLRFNNRAGNSMVVVRSMELTQKKTTMQFKALDGILRTNDPNTGERVALSHKCGELDRQIPTLMGVSKPILEHVVFTHQEDSSWPLQDAASLKRKFDDIFDSTRYAKALEAIRKSRLEYANVAKEHKSELSGLASHKHAAEGFRQETDMARDELAEIDEKMAACDESIERESEKRSKY 260
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: A0A835YS38_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS38_9STRA) HSP 1 Score: 254 bits (648), Expect = 5.570e-82 Identity = 128/202 (63.37%), Postives = 155/202 (76.73%), Query Frame = 1 Query: 13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAE 618 Q IEFY PLTMIVG NGCGKTTIIECL+ A TG LPP SRNGQ+F+HDPK+S +VKA IKLR + P+VV+RS QL+QKKT + FKALDGV++ ++ G S KC++LDKQ+P + VS AI+E+VIFCHQEESSWPLQEGAV+KKKFDDIFES+RYTKALD IK + E A KVK+ + +L L AH AA+ Sbjct: 21 QIIEFYMPLTMIVGSNGCGKTTIIECLRYATTGILPPNSRNGQTFVHDPKMSNTTEVKAQIKLRLQRGVDMPIVVVRSLQLTQKKTTMQFKALDGVLKYGNNDGGNTSSTGVKCTDLDKQLPTLMRVSRAILESVIFCHQEESSWPLQEGAVLKKKFDDIFESARYTKALDVIKATRVELANKVKDYKGELAALTAHSEAAD 222
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: H3GA74_PHYRM (AAA_23 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GA74_PHYRM) HSP 1 Score: 253 bits (645), Expect = 1.340e-81 Identity = 121/194 (62.37%), Postives = 160/194 (82.47%), Query Frame = 1 Query: 13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGL 594 Q IEFY PLT+++G+NGCGKTT+IECLKLACTG LPPG+R+GQS IHDPKI+G +VKASI+LRF+ + G+ MVV R++Q+ Q K L FKALDGVIR ++ GEK+S+NHKC ELD+ +P+ +GVS AI+E+VIFCHQE+S+WPL+EGA +KK+FD+IFES+RYTKAL+ I+KLK+ K+ + DL+ L Sbjct: 21 QIIEFYHPLTVLLGDNGCGKTTVIECLKLACTGGLPPGARSGQSLIHDPKIAGTNEVKASIRLRFRNRAGKAMVVQRTYQVRQTKKNLVFKALDGVIRVVNEL-GEKVSLNHKCGELDQHIPDMLGVSKAILESVIFCHQEDSNWPLREGAELKKRFDNIFESARYTKALEAIRKLKKARMDNAKDYKRDLDVL 213
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: A0A2P4XQ47_9STRA (DNA repair protein RAD50 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQ47_9STRA) HSP 1 Score: 254 bits (649), Expect = 1.810e-80 Identity = 124/213 (58.22%), Postives = 168/213 (78.87%), Query Frame = 1 Query: 13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAENYESVLERLQE 651 + +EFY PLT+++G+NGCGKTT+IECLKLACTG LPPG+R+G S IHDPKI+G +VKASI+LRF+ + G+ MVV R++Q+ Q K AL FKALDGVIR ++ GEK+S+NHKC ELD+ +P+ +GVS AI+E+VIFCHQE+S+WPL+EGA +KK+FD+IFES+RYTKAL+ I+KLK+ K+ + DL+ L + AA + +E QE Sbjct: 21 EILEFYHPLTVLLGDNGCGKTTVIECLKLACTGGLPPGARSGHSLIHDPKIAGTNEVKASIRLRFRNRAGKAMVVNRTYQVRQTKKALQFKALDGVIRVVNEL-GEKVSLNHKCGELDQHIPDMLGVSKAILESVIFCHQEDSNWPLREGAELKKRFDNIFESARYTKALEAIRKLKKARLDNAKDYKRDLDVLTVNMKAAGDIRDKIELAQE 232
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: B8CAM3_THAPS (AAA_23 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAM3_THAPS) HSP 1 Score: 273 bits (697), Expect = 2.030e-80 Identity = 132/204 (64.71%), Postives = 167/204 (81.86%), Query Frame = 1 Query: 13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAENY 624 Q I F PLT+IVG NGCGKTTIIE LK A TGSLPPG+++GQSF+HDPK G + VKASIKLRF +G MVVIRS +++QKK FKALDG++RT D TGE+ S++HKC+ELDKQ+P+ +GVS I+E+V+FCHQE+SSWPLQEGAV+KK+FDDIF+S+RY KAL+ IK ++EYA +VK+L+ADLEGLK+HK AA + Sbjct: 22 QVIGFCFPLTIIVGANGCGKTTIIESLKYAVTGSLPPGNKSGQSFVHDPKSIGQSSVKASIKLRFNNRGNHSMVVIRSMEVTQKKATANFKALDGILRTVDPNTGERTSLSHKCTELDKQIPHLMGVSKPILEHVVFCHQEDSSWPLQEGAVLKKRFDDIFDSTRYAKALEAIKGSRKEYASQVKDLKADLEGLKSHKHAASGF 225
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: F0Y226_AURAN (AAA_23 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y226_AURAN) HSP 1 Score: 248 bits (633), Expect = 6.380e-80 Identity = 125/194 (64.43%), Postives = 153/194 (78.87%), Query Frame = 1 Query: 13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGL 594 + IEF +PLTMIVG NGCGKTT+IE TG PPGS +G++F+HDPK+SGV +VKA +KLRFK GQ MVV+RS QL+Q+KT TFK +DGVIR +DA+GE+ S HKC ELDK VP IGVS A++E+VIFCHQEESSWPLQEGAV+KKKFDDIFES+RY+KALD ++K + +VKEL DL+GL Sbjct: 21 EAIEFQTPLTMIVGANGCGKTTVIE---YGTTGCAPPGSNSGRAFVHDPKVSGVTEVKAQLKLRFKNYAGQRMVVVRSMQLTQRKTTATFKQMDGVIRA-NDASGERTSYTHKCGELDKTVPMLIGVSKAVLESVIFCHQEESSWPLQEGAVLKKKFDDIFESARYSKALDELRKQRLAKNAQVKELVGDLKGL 210
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: A0A8J2S5K6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S5K6_9STRA) HSP 1 Score: 268 bits (686), Expect = 6.860e-79 Identity = 135/205 (65.85%), Postives = 164/205 (80.00%), Query Frame = 1 Query: 13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIR-TKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAENY 624 Q IEF SPLTMIVG NGCGKTT+IECLK TG PPGS +G++F+HDPK++GV++VKA +KLRFK GGQ MVV+RS QL+QKKT TFK LDGVIR TK D G K S HKC ELDK VP IGVS A++E+VIFCHQE+SSWPLQEGAV+KK+FDDIF+S+RYTKALD + K K+ A K K++ DL+GL A K+AA+++ Sbjct: 21 QAIEFESPLTMIVGANGCGKTTVIECLKFGTTGQAPPGSASGKAFVHDPKVTGVSEVKAQLKLRFKNYGGQRMVVVRSMQLTQKKTTATFKQLDGVIRATKPD--GSKTSYTHKCGELDKTVPIMIGVSRAVLESVIFCHQEDSSWPLQEGAVLKKRFDDIFDSARYTKALDVLNKQKKGLASKAKDISGDLKGLHADKVAAQDH 223
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: A0A1V9ZZA5_9STRA (DNA repair protein RAD50 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZA5_9STRA) HSP 1 Score: 267 bits (683), Expect = 1.400e-78 Identity = 135/232 (58.19%), Postives = 179/232 (77.16%), Query Frame = 1 Query: 13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKELRADLEGLKAHKMAAENYESVLERLQEQYMTLKHEAATIDTRINEL 708 +TI+F PLT+I+G NGCGKTTIIECLK++CTGSLPP +R+GQSFIHDPKI G +VKAS++LRFK++ GQ MVV R+F+L Q KT F+A+DGV+R ++ GEK+SIN KCSELDK +P+ +GVS A++E+VIFCHQEES+WPLQEGAV+KK+FDDIFES+RYTKAL+ IKKLK++ K+++ DL+ + + ES LE Q + LK E A + I++L Sbjct: 21 ETIDFNQPLTVILGANGCGKTTIIECLKVSCTGSLPPSARSGQSFIHDPKIRGDVEVKASVRLRFKSRAGQTMVVQRTFRLQQMKTNCKFQAMDGVVRMINEH-GEKVSINQKCSELDKHIPDLLGVSKAVLESVIFCHQEESNWPLQEGAVLKKRFDDIFESARYTKALEAIKKLKKDRLTMAKDMKRDLDVIGEQVKRVRDMESQLEARQAKLEELKDEFALMSGEIDQL 251
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Match: A0A1E7F3C8_9STRA (AAA_23 domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3C8_9STRA) HSP 1 Score: 244 bits (623), Expect = 1.780e-78 Identity = 117/186 (62.90%), Postives = 152/186 (81.72%), Query Frame = 1 Query: 13 QTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIHDPKISGVADVKASIKLRFKAKGGQPMVVIRSFQLSQKKTALTFKALDGVIRTKDDATGEKLSINHKCSELDKQVPNYIGVSAAIMENVIFCHQEESSWPLQEGAVVKKKFDDIFESSRYTKALDTIKKLKQEYALKVKE 570 Q +EFY PLT+IVGE CGKTTIIE LK A G+LPPG GQ+F+HDPK G VKA++KLRF A GG+ MV++RS +++QKKT +TFK LDG +RT ++ TGE+++++HKC+ELD+Q+P +GVS AI+ENV+FCHQE++SWPLQEGAV+KKKFDDIF+S+RYTKALD K K+EY LK K+ Sbjct: 22 QVLEFYMPLTVIVGE--CGKTTIIEALKFAVCGALPPGKNAGQAFVHDPKSIGSTSVKANLKLRFTAHGGKSMVIVRSMEVTQKKTTMTFKQLDGNLRTVNN-TGERIAMSHKCTELDRQIPLMLGVSKAILENVVFCHQEDASWPLQEGAVLKKKFDDIFDSTRYTKALDVFSKAKKEYVLKAKD 204 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9896.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9896.1.1 >prot_P-wetherbeei_contig9896.1.1 ID=prot_P-wetherbeei_contig9896.1.1|Name=mRNA_P-wetherbeei_contig9896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp HFSAQTIEFYSPLTMIVGENGCGKTTIIECLKLACTGSLPPGSRNGQSFIback to top mRNA from alignment at P-wetherbeei_contig9896:2..1910- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9896.1.1 ID=mRNA_P-wetherbeei_contig9896.1.1|Name=mRNA_P-wetherbeei_contig9896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1909bp|location=Sequence derived from alignment at P-wetherbeei_contig9896:2..1910- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9896:2..1910- >mRNA_P-wetherbeei_contig9896.1.1 ID=mRNA_P-wetherbeei_contig9896.1.1|Name=mRNA_P-wetherbeei_contig9896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig9896:2..1910- (Phaeothamnion wetherbeei SAG_119_79)back to top |