mRNA_P-wetherbeei_contig9837.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9837.1.1
Unique NamemRNA_P-wetherbeei_contig9837.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9837.1.1 vs. uniprot
Match: A0A0S7Z3X5_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium SG8_30 TaxID=1703404 RepID=A0A0S7Z3X5_9GAMM)

HSP 1 Score: 371 bits (953), Expect = 1.920e-127
Identity = 193/246 (78.46%), Postives = 208/246 (84.55%), Query Frame = 1
Query:   61 PFAAPCNLLPAGAPLGWVRKGWQDYRRAPAQSLAYGAAIVALSWVVTGIGLRVGSYWAVLVLLSGFVFVAPLLALGLYSISRQLERGAAPSMATGLAEMLRSLGTLMVFALALLVVFLVWARAGSMVHVFFPVRSNPDLGQLATFLAIGSAVGSIFACITFLFSAFSLPMICDRDTDAITAIVTSVNAVLRNKPAMAVWAALIVGLTALGFATALFGLAVAIPVLGYATWHGYRETVDAGAWPSHG 798
            PF APC  LPA APLGW+RKGW D RRAP QSLAYG  I  LSW VTGI LR G+YWAVLVLLSGFVFVAP+LALGLYSISRQLE G  PS+A    E  R LGT MVFALALLVVFLVWARAGSMVHVFFPV + PD  Q+ATFLAIGSAVGS+FA +TF FSAFSLPMICDRD DA+TA+VTSVNAVLRNK AMAVW ALIV LTA+GFATAL GLAV IP+LG+ATWHGYRETVDA AWP++G
Sbjct:   14 PFVAPCRSLPATAPLGWIRKGWIDVRRAPRQSLAYGVVIALLSWAVTGIALRFGNYWAVLVLLSGFVFVAPVLALGLYSISRQLESGLEPSLARCFGEQRRGLGTAMVFALALLVVFLVWARAGSMVHVFFPVEAEPDWTQIATFLAIGSAVGSVFALLTFAFSAFSLPMICDRDADAVTAVVTSVNAVLRNKAAMAVWVALIVTLTAIGFATALVGLAVTIPLLGHATWHGYRETVDASAWPANG 259          
BLAST of mRNA_P-wetherbeei_contig9837.1.1 vs. uniprot
Match: A0A3N5XE64_9PROT (DUF2189 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5XE64_9PROT)

HSP 1 Score: 368 bits (945), Expect = 3.650e-126
Identity = 189/266 (71.05%), Postives = 216/266 (81.20%), Query Frame = 1
Query:    1 SSMTEEASRLERGAPEGRPLPFAAPCNLLPAGAPLGWVRKGWQDYRRAPAQSLAYGAAIVALSWVVTGIGLRVGSYWAVLVLLSGFVFVAPLLALGLYSISRQLERGAAPSMATGLAEMLRSLGTLMVFALALLVVFLVWARAGSMVHVFFPVRSNPDLGQLATFLAIGSAVGSIFACITFLFSAFSLPMICDRDTDAITAIVTSVNAVLRNKPAMAVWAALIVGLTALGFATALFGLAVAIPVLGYATWHGYRETVDAGAWPSHG 798
            S +++  ++ E   P+   LPFAAPC  L AGAP  W+RKGW D+RRAP QSL YG  I  LSW+VTGIGL++GSYWA LVLLSGFVF+AP+LALGLYSISRQLE G  PS+A       +SLG  MVFALALLV+FLVWARAGSMVHVFFP     D  +LA FLAIGSAVGSIFA +TF+FSAFSLPM+CDR+ DA+TAIVTSVNAVLRNKPAMAVWA LIVGLTA+GFATAL GLAV IPVLG+ATWH YRET+DA AWP++G
Sbjct:    4 SPLSDNPAQRESAPPDPAALPFAAPCRTLSAGAPFAWIRKGWADFRRAPRQSLGYGIFIALLSWLVTGIGLKLGSYWAALVLLSGFVFIAPVLALGLYSISRQLEHGLTPSLARCFGTQRKSLGNAMVFALALLVLFLVWARAGSMVHVFFPAGGGADWRELAMFLAIGSAVGSIFALLTFIFSAFSLPMMCDREADAVTAIVTSVNAVLRNKPAMAVWALLIVGLTAIGFATALLGLAVTIPVLGHATWHAYRETIDAAAWPANG 269          
BLAST of mRNA_P-wetherbeei_contig9837.1.1 vs. uniprot
Match: A0A3M1S4L8_9GAMM (DUF2189 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1S4L8_9GAMM)

HSP 1 Score: 294 bits (752), Expect = 8.300e-97
Identity = 155/259 (59.85%), Postives = 186/259 (71.81%), Query Frame = 1
Query:   31 ERGAPEGRPLPFAAPCNLLPAGAPLGWVRKGWQDYRRAPAQSLAYGAAIVALSWVVTGIGLRVGSYWAVLVLLSGFVFVAPLLALGLYSISRQLERGAAPSMATGLAEM-LRSLGTLMVFALALLVVFLVWARAGSMVHVFFPVRSNPDLGQLATFLAIGSAVGSIFACITFLFSAFSLPMICDRDTDAITAIVTSVNAVLRNKPAMAVWAALIVGLTALGFATALFGLAVAIPVLGYATWHGYRETVDAGAWPSHGAG 804
            E  APE  PLPF APC  LP  A LGW+R+ W D R AP   LAYG  +  LS  ++ +  R GSYW +L  LSGFVF+ P+L LGLY+IS QLER   P +   L E  +R +GT MVF+L LLVVFLVWARA SMVHVFFPV + PDL  LA++L +G+AVG+IFA ITF  SAFSLPM+  RD DA+TA+VTS+NAVLRNKPAMAVWAALIV    LGFAT   G  + IP++GYA+WHGY+ T+DAG +P H  G
Sbjct:    3 ETQAPEPAPLPFVAPCRRLPPLAALGWLRRAWLDLRAAPGLGLAYGLVVALLSLTMSWVAWRFGSYWLLLAALSGFVFIGPVLCLGLYAISAQLEREQRPRLTVSLREAAVRRIGTEMVFSLMLLVVFLVWARAASMVHVFFPVEAEPDLAALASYLGVGTAVGAIFAAITFAASAFSLPMLMHRDVDAVTAVVTSINAVLRNKPAMAVWAALIVLSVLLGFATLCAGFVITIPLIGYASWHGYQATIDAGDFPRHAEG 261          
BLAST of mRNA_P-wetherbeei_contig9837.1.1 vs. uniprot
Match: A0A6M1Y6B7_9GAMM (DUF2189 domain-containing protein n=2 Tax=Wenzhouxiangella sp. XN24 TaxID=2713569 RepID=A0A6M1Y6B7_9GAMM)

HSP 1 Score: 292 bits (748), Expect = 2.480e-96
Identity = 155/247 (62.75%), Postives = 181/247 (73.28%), Query Frame = 1
Query:   49 GRPLPFAAPCNLLPAGAPLGWVRKGWQDYRRAPAQSLAYGAAIVALSWVVTGIGLRVGSYWAVLVLLSGFVFVAPLLALGLYSISRQLERGAAPSMATGLAEMLRSLGTLMVFALALLVVFLVWARAGSMVHVFFPVRSNPDLGQLATFLAIGSAVGSIFACITFLFSAFSLPMICDRDTDAITAIVTSVNAVLRNKPAMAVWAALIVGLTALGFATALFGLAVAIPVLGYATWHGYRETVDAGAWP 789
            G  LPF APC  +   AP  W+  GW+D R AP QSL +G  ++ LSW V+ + L +GS+  +L LLSGFVFV PLLA+ LY+IS QLERG  P+          ++G  MVFAL LLVVFLVWARAGSMVHVFFPV+S PD GQL  FLAIGSAVGSIFA ITF  SAFS+PM+ DR TD +TA+VTS+NA LRNKPAMAVW A+IV LT +GFATA  GLAV  P LG+ATWH YR+ VD GAWP
Sbjct:   14 GDALPFVAPCRRVSIDAPFRWLAAGWRDLRAAPGQSLGWGLVVLGLSWTVSLLALWLGSWLMLLSLLSGFVFVGPLLAIALYAISWQLERGRVPTFDRSFDVARATIGDSMVFALILLVVFLVWARAGSMVHVFFPVQSQPDTGQLLRFLAIGSAVGSIFAAITFAASAFSIPMMMDRKTDTVTAVVTSINASLRNKPAMAVWLAIIVTLTGIGFATAFVGLAVLFPWLGHATWHAYRDVVDTGAWP 260          
BLAST of mRNA_P-wetherbeei_contig9837.1.1 vs. uniprot
Match: A0A2E6RB36_9GAMM (Uncharacterized protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A2E6RB36_9GAMM)

HSP 1 Score: 283 bits (723), Expect = 1.820e-92
Identity = 152/243 (62.55%), Postives = 178/243 (73.25%), Query Frame = 1
Query:   61 PFAAPCNLLPAGAPLGWVRKGWQDYRRAPAQSLAYGAAIVALSWVVTGIGLRVGSYWAVLVLLSGFVFVAPLLALGLYSISRQLERGAAPSMATGLAEMLRSLGTLMVFALALLVVFLVWARAGSMVHVFFPVRSNPDLGQLATFLAIGSAVGSIFACITFLFSAFSLPMICDRDTDAITAIVTSVNAVLRNKPAMAVWAALIVGLTALGFATALFGLAVAIPVLGYATWHGYRETVDAGAWP 789
            PFAAPC  L A APL W+  GW+DY+ +P  SLAYG  +  +S  V+ +   +GSY  V+ +LSGF+FVAPLLA G+YS+SRQL RG + S A  +  M  +L   +VFAL LLV+FLVW RAG MVHVFFP   + DL  L  FL IGSAVGSIFA +TF  +AFSLPMI DRD D +TA +TSVNAVLRNKPAMAVW ALIV LT LGFATA  GL V IP+LGYATWHGY ET+DA AWP
Sbjct:   14 PFAAPCRRLAANAPLRWIAAGWRDYKASPGISLAYGLIVFGVSLGVSLLAWELGSYVLVISMLSGFIFVAPLLATGMYSVSRQLGRGKSVSFARSVKRMHLALRDALVFALVLLVIFLVWVRAGVMVHVFFPAGESHDLMLLLRFLGIGSAVGSIFALVTFSAAAFSLPMIVDRDADMVTACITSVNAVLRNKPAMAVWIALIVALTGLGFATAGLGLIVVIPLLGYATWHGYVETIDAAAWP 256          
BLAST of mRNA_P-wetherbeei_contig9837.1.1 vs. uniprot
Match: UPI0013ED9794 (DUF2189 domain-containing protein n=1 Tax=Thioalkalivibrio sp. XN8 TaxID=2712863 RepID=UPI0013ED9794)

HSP 1 Score: 276 bits (706), Expect = 5.470e-90
Identity = 149/253 (58.89%), Postives = 173/253 (68.38%), Query Frame = 1
Query:   37 GAPEGRPLPFAAPCNLLPAGAPLGWVRKGWQDYRRAPAQSLAYGAAIVALSWVVTGIGLRVGSYWAVLVLLSGFVFVAPLLALGLYSISRQLERGAAPSMATGLAEMLRSLGTLMVFALALLVVFLVWARAGSMVHVFFPVRSNPDLGQLATFLAIGSAVGSIFACITFLFSAFSLPMICDRDTDAITAIVTSVNAVLRNKPAMAVWAALIVGLTALGFATALFGLAVAIPVLGYATWHGYRETVDAGAWPSH 795
            GA E    PF APC  + AGAPL W+  GW+D R AP QSLA+G  ++ L                +L LLSGFVF+ PLLA+ LY+IS QLE G  P+    +    R L   MVFAL LL++FLVWARAGSMVHVFFP+ S P+L QL  FLAIGSAVGSIFA I F  SAFSLPM+ DR  D ITA+++S NA LRNKPAMAVW ALIV LT +GFATA  GLAV  P+LG+ATWH YRET+D  AWP H
Sbjct:    8 GAGEEPAYPFVAPCRRIGAGAPLRWLAAGWRDLRAAPGQSLAWGLVVLGLXXXXXXXXXXXXXXXMMLSLLSGFVFIGPLLAIALYAISWQLELGRVPTFDISIRTARRRLADSMVFALVLLIIFLVWARAGSMVHVFFPIESRPELVQLVRFLAIGSAVGSIFAAIAFAASAFSLPMLVDRQVDTITAVLSSANAALRNKPAMAVWLALIVVLTGVGFATAFVGLAVLFPLLGHATWHAYRETIDGSAWPRH 260          
BLAST of mRNA_P-wetherbeei_contig9837.1.1 vs. uniprot
Match: A0A4V3H3K1_9GAMM (Putative membrane protein n=1 Tax=Thiohalophilus thiocyanatoxydans TaxID=381308 RepID=A0A4V3H3K1_9GAMM)

HSP 1 Score: 275 bits (703), Expect = 1.720e-89
Identity = 142/253 (56.13%), Postives = 183/253 (72.33%), Query Frame = 1
Query:   31 ERGAPEGRPLPFAAPCNLLPAGAPLGWVRKGWQDYRRAPAQSLAYGAAIVALSWVVTGIGLRVGSYWAVLVLLSGFVFVAPLLALGLYSISRQLERGAAPSMATGLAEMLRSLGTLMVFALALLVVFLVWARAGSMVHVFFPVRSNPDLGQLATFLAIGSAVGSIFACITFLFSAFSLPMICDRDTDAITAIVTSVNAVLRNKPAMAVWAALIVGLTALGFATALFGLAVAIPVLGYATWHGYRETVDAGAWP 789
            E G PE   LPF APC  L  GAPL W+  GWQD   AP  SL+YG+ ++ LS++++ I    GS + +L +LSGF+F+ P++A+GLYSISRQL+ G  P +   L E  R LG L+VFA+ LLVV L+WARA SMVHVFFPV  +P+L   A FL +G+AVG++FA I F  SAFSLPM+ DR  D +TA++TS+NAVLRNKPAM +WA LIV +  L FAT L GLA+ +PV+G+ATWH Y+ET+DA AWP
Sbjct:    8 ESGNPEE--LPFVAPCRRLAPGAPLRWLSLGWQDLMGAPLPSLSYGSIVLLLSYLISLIAWYYGSVYLLLAMLSGFIFIGPVMAVGLYSISRQLQAGRQPVLGYCLREGRRHLGNLLVFAVILLVVVLIWARAASMVHVFFPVAGDPELADFALFLGVGTAVGTLFAAIVFCASAFSLPMLLDRRADTVTAVLTSINAVLRNKPAMLLWAGLIVAIVLLSFATGLLGLALGMPVIGHATWHAYQETIDASAWP 258          
BLAST of mRNA_P-wetherbeei_contig9837.1.1 vs. uniprot
Match: UPI00144A6E3B (DUF2189 domain-containing protein n=1 Tax=Wenzhouxiangella sp. XN79A TaxID=2724193 RepID=UPI00144A6E3B)

HSP 1 Score: 273 bits (697), Expect = 1.040e-88
Identity = 148/243 (60.91%), Postives = 170/243 (69.96%), Query Frame = 1
Query:   61 PFAAPCNLLPAGAPLGWVRKGWQDYRRAPAQSLAYGAAIVALSWVVTGIGLRVGSYWAVLVLLSGFVFVAPLLALGLYSISRQLERGAAPSMATGLAEMLRSLGTLMVFALALLVVFLVWARAGSMVHVFFPVRSNPDLGQLATFLAIGSAVGSIFACITFLFSAFSLPMICDRDTDAITAIVTSVNAVLRNKPAMAVWAALIVGLTALGFATALFGLAVAIPVLGYATWHGYRETVDAGAWP 789
            PFAAPC  L   A   WVR GW+DYR +   SL YG  +  LS VVT +  + G Y  V+ +LSGFVF+APL+A G+YS+SRQLERG  PS +     M   +   ++FALAL V+FLVW RA  M+HVFFPV     L  L TFLAIGSAVGSIFA + F  SAFSLPMI DRD D +TA VTS+NAVLRNKPAMAVW A IVGLT LGFATA  GL V IP+LGYAT H YR T+DA AWP
Sbjct:   11 PFAAPCRALELTAAFEWVRAGWRDYRASLRVSLVYGLLVFTLSLVVTVLSWKAGRYGLVMAMLSGFVFIAPLMATGMYSVSRQLERGERPSFSRSARRMKIVVRDALIFALALTVIFLVWVRAAFMLHVFFPVGVEESLEGLLTFLAIGSAVGSIFAAVVFAISAFSLPMIVDRDADMVTASVTSMNAVLRNKPAMAVWVACIVGLTGLGFATAGLGLIVTIPLLGYATHHAYRSTIDASAWP 253          
BLAST of mRNA_P-wetherbeei_contig9837.1.1 vs. uniprot
Match: A0A2N6CK92_9GAMM (Uncharacterized protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2N6CK92_9GAMM)

HSP 1 Score: 272 bits (696), Expect = 2.670e-88
Identity = 147/243 (60.49%), Postives = 173/243 (71.19%), Query Frame = 1
Query:   61 PFAAPCNLLPAGAPLGWVRKGWQDYRRAPAQSLAYGAAIVALSWVVTGIGLRVGSYWAVLVLLSGFVFVAPLLALGLYSISRQLERGAAPSMATGLAEMLRSLGTLMVFALALLVVFLVWARAGSMVHVFFPVRSNPDLGQLATFLAIGSAVGSIFACITFLFSAFSLPMICDRDTDAITAIVTSVNAVLRNKPAMAVWAALIVGLTALGFATALFGLAVAIPVLGYATWHGYRETVDAGAWP 789
            PF APC  L A AP GW++KG  D+RRA  QSL YG  +VALSW++ G    +GSY  VL LLSGFVFV P+LA+  YSISRQLER   P+++  L    R L + MVFAL L+VVFLVWARA SM+HVFFPV        L  FLA+GSAVGS+FA  TF  SAFSLPM+ DR  D +TA+V+S+NAVLRNK AM VW  LIV    +GFATA  GLAV +PVLGYATWH YR+ +DA AWP
Sbjct:   11 PFVAPCRKLAATAPFGWIKKGIADFRRARRQSLMYGGILVALSWLIVGTAWVLGSYILVLALLSGFVFVGPVLAICSYSISRQLERDETPTISRCLVSGRRHLASAMVFALVLMVVFLVWARAASMIHVFFPVAGEYQWRDLLPFLAVGSAVGSLFAGFTFGASAFSLPMLVDRKVDIVTAVVSSINAVLRNKSAMVVWIILIVIGVGIGFATAFIGLAVILPVLGYATWHSYRDCIDASAWP 253          
BLAST of mRNA_P-wetherbeei_contig9837.1.1 vs. uniprot
Match: A0A7V5XE53_9GAMM (DUF2189 domain-containing protein (Fragment) n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7V5XE53_9GAMM)

HSP 1 Score: 269 bits (688), Expect = 2.840e-87
Identity = 142/252 (56.35%), Postives = 174/252 (69.05%), Query Frame = 1
Query:   52 RPLPFAAPCNLLPAGAPLGWVRKGWQDYRRAPAQSLAYGAAIVALSWVVTGIGLRVGSYWAVLVLLSGFVFVAPLLALGLYSISRQLERGAAPSMATGLAEM-LRSLGTLMVFALALLVVFLVWARAGSMVHVFFPVRSNPDLGQLATFLAIGSAVGSIFACITFLFSAFSLPMICDRDTDAITAIVTSVNAVLRNKPAMAVWAALIVGLTALGFATALFGLAVAIPVLGYATWHGYRETVDAGAWPSHGAG 804
            +PLP AAPC  L   AP  W+R G+ D R AP  SL+YG     LSW ++ +  R G  W ++  LSGFVF+ P+L LGLY+IS QLERG  PS+ T + E     LGT MVFAL LLVVFLVWARA S+VHVFFPV ++PD  Q+  +L IGSAVG++FA  TF  SAF+LPMI  RD DA+TA+VTS+NAVLRNK AM VWA LI+     GF T   GL V IP++G+ATWHGY +T+DA  +P H  G
Sbjct:   10 QPLPIAAPCRKLSPTAPFEWLRLGFADIRAAPLISLSYGLFTAVLSWAMSLVAWRFGGNWLLIAALSGFVFLGPVLCLGLYAISAQLERGRKPSLYTSIREAGAHRLGTEMVFALILLVVFLVWARAASLVHVFFPVEAHPDWSQMVAYLGIGSAVGALFAAFTFAASAFALPMIMHRDVDAVTAVVTSINAVLRNKAAMTVWAGLIILCVLAGFLTGFLGLIVTIPLIGHATWHGYEQTIDASVFPRHSRG 261          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9837.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S7Z3X5_9GAMM1.920e-12778.46Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A3N5XE64_9PROT3.650e-12671.05DUF2189 domain-containing protein n=1 Tax=Betaprot... [more]
A0A3M1S4L8_9GAMM8.300e-9759.85DUF2189 domain-containing protein n=1 Tax=Gammapro... [more]
A0A6M1Y6B7_9GAMM2.480e-9662.75DUF2189 domain-containing protein n=2 Tax=Wenzhoux... [more]
A0A2E6RB36_9GAMM1.820e-9262.55Uncharacterized protein n=1 Tax=Xanthomonadales ba... [more]
UPI0013ED97945.470e-9058.89DUF2189 domain-containing protein n=1 Tax=Thioalka... [more]
A0A4V3H3K1_9GAMM1.720e-8956.13Putative membrane protein n=1 Tax=Thiohalophilus t... [more]
UPI00144A6E3B1.040e-8860.91DUF2189 domain-containing protein n=1 Tax=Wenzhoux... [more]
A0A2N6CK92_9GAMM2.670e-8860.49Uncharacterized protein n=1 Tax=Chromatiales bacte... [more]
A0A7V5XE53_9GAMM2.840e-8756.35DUF2189 domain-containing protein (Fragment) n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9837contigP-wetherbeei_contig9837:499..1305 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1123401.JHYQ01000028_gene3161
PFAMsDUF2189
Model size807
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categorysignal anchor
Exons1
Evalue3.15e-78
EggNOG OGsCOG5473@1|root,COG5473@2|Bacteria,1MVRU@1224|Proteobacteria,1RPJA@1236|Gammaproteobacteria
Descriptionintegral membrane protein
Cds size801
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187112.5112388-CDS-P-wetherbeei_contig9837:498..12991683187112.5112388-CDS-P-wetherbeei_contig9837:498..1299Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9837 499..1299 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187112.5229375-UTR-P-wetherbeei_contig9837:1299..13051683187112.5229375-UTR-P-wetherbeei_contig9837:1299..1305Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig9837 1300..1305 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9837.1.1prot_P-wetherbeei_contig9837.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9837 499..1299 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9837.1.1

>prot_P-wetherbeei_contig9837.1.1 ID=prot_P-wetherbeei_contig9837.1.1|Name=mRNA_P-wetherbeei_contig9837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp
MTEEASRLERGAPEGRPLPFAAPCNLLPAGAPLGWVRKGWQDYRRAPAQS
LAYGAAIVALSWVVTGIGLRVGSYWAVLVLLSGFVFVAPLLALGLYSISR
QLERGAAPSMATGLAEMLRSLGTLMVFALALLVVFLVWARAGSMVHVFFP
VRSNPDLGQLATFLAIGSAVGSIFACITFLFSAFSLPMICDRDTDAITAI
VTSVNAVLRNKPAMAVWAALIVGLTALGFATALFGLAVAIPVLGYATWHG
YRETVDAGAWPSHGAG*
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mRNA from alignment at P-wetherbeei_contig9837:499..1305-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9837.1.1 ID=mRNA_P-wetherbeei_contig9837.1.1|Name=mRNA_P-wetherbeei_contig9837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig9837:499..1305- (Phaeothamnion wetherbeei SAG_119_79)
AGTTCCATGACCGAGGAAGCCTCCCGCCTGGAGCGCGGCGCGCCCGAGGG ACGTCCCCTGCCGTTCGCGGCGCCCTGCAACCTGCTGCCGGCCGGCGCGC CACTGGGCTGGGTACGCAAGGGCTGGCAGGACTACCGCCGCGCGCCGGCG CAGAGCCTCGCCTACGGTGCCGCGATCGTCGCGCTGTCATGGGTCGTGAC CGGCATCGGGCTGAGGGTGGGCAGCTACTGGGCGGTGCTGGTGCTGCTGT CGGGCTTCGTGTTCGTCGCGCCGCTGCTCGCGCTGGGCCTGTACTCGATC AGCCGGCAGCTCGAGCGCGGCGCCGCGCCTTCGATGGCGACGGGCCTCGC CGAGATGCTCCGCAGCCTCGGCACCCTCATGGTGTTCGCGCTCGCACTTC TGGTGGTGTTCCTGGTGTGGGCGCGGGCGGGCTCGATGGTCCACGTGTTC TTTCCCGTGCGCTCAAACCCGGACCTCGGCCAGCTTGCGACGTTCCTTGC GATCGGCTCGGCCGTGGGCTCGATCTTCGCGTGCATCACCTTCCTCTTCA GCGCCTTCTCGCTGCCGATGATCTGCGACCGCGACACCGACGCGATCACG GCGATCGTGACCAGCGTGAACGCGGTGCTGCGCAACAAGCCCGCGATGGC GGTCTGGGCGGCGCTGATCGTCGGGCTGACGGCGCTGGGCTTCGCCACCG CCCTCTTCGGCCTCGCTGTGGCGATCCCGGTACTGGGGTACGCGACCTGG CACGGCTATCGCGAGACCGTCGACGCGGGCGCATGGCCATCGCACGGGGC CGGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9837:499..1305-

>mRNA_P-wetherbeei_contig9837.1.1 ID=mRNA_P-wetherbeei_contig9837.1.1|Name=mRNA_P-wetherbeei_contig9837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig9837:499..1305- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGAGGAAGCCTCCCGCCTGGAGCGCGGCGCGCCCGAGGGACGTCC
CCTGCCGTTCGCGGCGCCCTGCAACCTGCTGCCGGCCGGCGCGCCACTGG
GCTGGGTACGCAAGGGCTGGCAGGACTACCGCCGCGCGCCGGCGCAGAGC
CTCGCCTACGGTGCCGCGATCGTCGCGCTGTCATGGGTCGTGACCGGCAT
CGGGCTGAGGGTGGGCAGCTACTGGGCGGTGCTGGTGCTGCTGTCGGGCT
TCGTGTTCGTCGCGCCGCTGCTCGCGCTGGGCCTGTACTCGATCAGCCGG
CAGCTCGAGCGCGGCGCCGCGCCTTCGATGGCGACGGGCCTCGCCGAGAT
GCTCCGCAGCCTCGGCACCCTCATGGTGTTCGCGCTCGCACTTCTGGTGG
TGTTCCTGGTGTGGGCGCGGGCGGGCTCGATGGTCCACGTGTTCTTTCCC
GTGCGCTCAAACCCGGACCTCGGCCAGCTTGCGACGTTCCTTGCGATCGG
CTCGGCCGTGGGCTCGATCTTCGCGTGCATCACCTTCCTCTTCAGCGCCT
TCTCGCTGCCGATGATCTGCGACCGCGACACCGACGCGATCACGGCGATC
GTGACCAGCGTGAACGCGGTGCTGCGCAACAAGCCCGCGATGGCGGTCTG
GGCGGCGCTGATCGTCGGGCTGACGGCGCTGGGCTTCGCCACCGCCCTCT
TCGGCCTCGCTGTGGCGATCCCGGTACTGGGGTACGCGACCTGGCACGGC
TATCGCGAGACCGTCGACGCGGGCGCATGGCCATCGCACGGGGCCGGCTG
A
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