mRNA_P-wetherbeei_contig9836.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9836.2.1 vs. uniprot
Match: A0A7S3UBA9_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UBA9_9CHLO) HSP 1 Score: 105 bits (262), Expect = 2.340e-24 Identity = 60/175 (34.29%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 1 RPADFIFPRLGRLLGFSGPWLDDREAGYYADPPETLDAAVTVVFVALAIGADRLLVLAFHGDMLWPLSLSVLGVIAAGVFEIGRPRMLRREEAEEERRTEEDFLAFAEERLERRGTVHISEVRTAFRQYNPRYRTAAGISDIAIERLARRW--HAGEQRSGYMRGLSLRKDADIF 519 RP+D + + G+ +G+ A + + P + AA +VF+ +G L GD W +S+++ + AGV+E+GRP L RE+AE R +DF FA+E L+ G H+SEV FR + +YR+ +D+ + L W HA SGY +GLSLR D F Sbjct: 126 RPSDLVLQQFGKWMGYD-------VASVHYEAPAVVRAAAVLVFLLAGVGVTASLRALTEGDTTWAVSVAIGFAMIAGVYELGRPVRLSREDAERLERMWQDFQGFADENLQDSGRCHVSEVEKRFRTSSAKYRSKESCTDMELRNLIANWAPHADRTPSGYYKGLSLRPRIDPF 293
BLAST of mRNA_P-wetherbeei_contig9836.2.1 vs. uniprot
Match: E1ZE98_CHLVA (Expressed protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZE98_CHLVA) HSP 1 Score: 97.1 bits (240), Expect = 9.160e-21 Identity = 63/170 (37.06%), Postives = 93/170 (54.71%), Query Frame = 1 Query: 1 RPADFIFPRLGRLLGFSGPWLDDREAGYYADPPETLDAAVTVVFVALAIGADRLLVLAFHGDMLWPLSLSVLGVIAAGVFEIGRPRMLRREEAEEERRTEEDFLAFAEERLERRGTVHISEVRTAFRQYNPRYR-TAAGISDIAIERLARRWHAGEQRS--GYMRGLSLR 501 RP+D++ +LGR G + +D R P L AA VF A + A GD W +S + +AAG++E+GRPR L EEA+ + + ++F FA+ERLERRG H +EV A ++ P+YR A+G+ A+ L R W +RS G+ +GLSL+ Sbjct: 170 RPSDWLLQKLGRTAGLNVDAIDYRV-------PAGLQAAAVAVFGASGLALSAAFQ-ALLGDATWAVSTGLGSCMAAGMYEVGRPRRLSVEEAQAKEQQWQEFGRFADERLERRGRCHETEVMRALQREMPKYRGEASGLDSSALRDLVRNWAPDAERSSNGFWKGLSLK 331
BLAST of mRNA_P-wetherbeei_contig9836.2.1 vs. uniprot
Match: A0A5P4NCE6_9CHLO (Uncharacterized protein n=1 Tax=Chlorella ohadii TaxID=2649997 RepID=A0A5P4NCE6_9CHLO) HSP 1 Score: 96.7 bits (239), Expect = 1.640e-20 Identity = 61/168 (36.31%), Postives = 90/168 (53.57%), Query Frame = 1 Query: 1 RPADFIFPRLGRLLGFSGPWLDDREAGYYADPPETLDAAVTVVFVALAIGADRLLVLAFHGDMLWPLSLSVLGVIAAGVFEIGRPRMLRREEAEEERRTEEDFLAFAEERLERRGTVHISEVRTAFRQYNPRYRTAAGISDIAIERLARRWHAGEQRS--GYMRGLSL 498 RP+D++ RLG G +D R P L AA VFVA +G L A GD W +S + + AAG++E+GRPR L E+A+E+ R +DF FA+ RL+R G H +E+ A ++ P++R + A+ +L R W +R+ GY +GLSL Sbjct: 186 RPSDWVLRRLGLATGQPVDAIDYRA-------PPALMAATVAVFVASGLGLAWTLQAAL-GDATWSVSTGLGSLFAAGMYEVGRPRRLTVEQAQEKERQWQDFARFADARLQRSGRCHETEIIKALQRELPQFRREGALEGAALRQLVRNWAPDAERTSAGYFKGLSL 345
BLAST of mRNA_P-wetherbeei_contig9836.2.1 vs. uniprot
Match: A0A2P6TSR8_CHLSO (PAS PAC sensor n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSR8_CHLSO) HSP 1 Score: 94.7 bits (234), Expect = 3.880e-20 Identity = 62/168 (36.90%), Postives = 90/168 (53.57%), Query Frame = 1 Query: 1 RPADFIFPRLGRLLGFSGPWLDDREAGYYADPPETLDAAVTVVFVALAIGADRLLVLAFHGDMLWPLSLSVLGVIAAGVFEIGRPRMLRREEAEEERRTEEDFLAFAEERLERRGTVHISEVRTAFRQYNPRYRTAAGISDIAIERLARRWHAGEQRS--GYMRGLSL 498 RP+D++ RLG G +D Y A PP L A VFVA +G L A GD W +S + + AAG++E+GRPR L E+A+E+ R +DF FA+ RL+R G H +E+ A ++ P++R + + +L R W +RS GY +GLSL Sbjct: 128 RPSDWVLRRLGLATGQPVDAID-----YRAPPP--LVAGTVGVFVASGMGLAWALQ-ALLGDATWSVSTGLGSLFAAGMYEVGRPRRLTVEQAQEKERQWQDFARFADARLQRSGRCHETEIAKALQRELPQFRREGALEGATLRQLVRNWAPDAERSSAGYYKGLSL 287
BLAST of mRNA_P-wetherbeei_contig9836.2.1 vs. uniprot
Match: A0A150GQ49_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GQ49_GONPE) HSP 1 Score: 93.6 bits (231), Expect = 7.150e-20 Identity = 66/176 (37.50%), Postives = 89/176 (50.57%), Query Frame = 1 Query: 1 RPADFIFPRLGR-LLGFSGPWLDDREAGYYADPPETLDAAVTVVFVALAIGADRLLVLAFHGDMLWPLSLSVLGVIAAGVFEIGRPRMLRREEAEEERRTEEDFLAFAEERLERRGTVHISEVRTAFRQYNPRYRTAAGISDIAIERLARRWHAGEQRS--GYMRGLSLRKDADIF 519 RP+D+I + R LG + +D EA P L A V VA + +L G+ +W LS +AAGV+E+GRP L R+EA + DF+AFA+ RL+R G H SEV FR+ PRYR+ +SD + L R WH R+ GY R LSL + F Sbjct: 72 RPSDWIIMNIARGPLGMN--IMDVNEA------PSWLTALAAGVCVASGLAISAVLQFGL-GNSIWALSTGTGACLAAGVYEVGRPTRLDRQEAAQLDAQWRDFVAFADARLQRSGRCHESEVVAVFRREVPRYRSPEALSDAVLRDLIRNWHPDASRTPNGYYRNLSLSPRVNAF 238
BLAST of mRNA_P-wetherbeei_contig9836.2.1 vs. uniprot
Match: A0A8J4D162_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D162_9CHLO) HSP 1 Score: 91.7 bits (226), Expect = 1.070e-18 Identity = 67/177 (37.85%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 1 RPADFIFPRLGR-LLGFSGPWLDDREAGYYADPPETLDAAVTVVF-VALAIGADRLLVLAFHGDMLWPLSLSVLGVIAAGVFEIGRPRMLRREEAEEERRTEEDFLAFAEERLERRGTVHISEVRTAFRQYNPRYRTAAGISDIAIERLARRWHAGEQRS--GYMRGLSLRKDADIF 519 RP+D+I +L R LG LD EA + + A + +V +A++ G L GD +W LS +AAGV+E+GRP+ L EE + + DF+ FAE RL R G H SEV AFR+ PRYR+ +SD + L R WH R+ GY R LSL + F Sbjct: 156 RPSDWIIMQLARGPLGLD--ILDVNEAPSWLS---YIAAGICLVSGLAISFGLQAGL-----GDSIWALSTGTGACLAAGVYEVGRPKRLNLEETRQLDQQWRDFVGFAESRLVRSGRCHESEVAAAFRREFPRYRSREALSDGVLRDLIRNWHPDADRTPNGYYRNLSLAARVNAF 322
BLAST of mRNA_P-wetherbeei_contig9836.2.1 vs. uniprot
Match: A0A2K3CXC0_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CXC0_CHLRE) HSP 1 Score: 89.4 bits (220), Expect = 2.390e-18 Identity = 68/177 (38.42%), Postives = 93/177 (52.54%), Query Frame = 1 Query: 1 RPADFIFPRLGR-LLGFSGPWLDDREAGYYADPPETLDAAVTVVFVA-LAIGADRLLVLAFHGDMLWPLSLSVLGVIAAGVFEIGRPRMLRREEAEEERRTEEDFLAFAEERLERRGTVHISEVRTAFRQYNPRYRTAAGISDIAIERLARRWHAGEQRS--GYMRGLSLRKDADIF 519 RP+D+I L R LG P D EA P A V V+ LAI A ++ A GD +W LS +AAGV+E+GRP+ + R EA+E DF+ +A RL R G H SE++TAFR+ PRYR+ ++D + L R W R+ G+ RG+SLR + F Sbjct: 73 RPSDWIIMVLARGPLGL--PITDVNEA-----PGWLSGVAAGVCLVSGLAISA---VLQAGLGDSIWALSTGTGACLAAGVYEVGRPKRMNRAEAQELDEQWRDFVGWANGRLVRSGRCHESEIQTAFRKQFPRYRSQDALTDATLRSLVRNWAPEVDRTPNGFYRGVSLRPRVNEF 239
BLAST of mRNA_P-wetherbeei_contig9836.2.1 vs. uniprot
Match: D8UCV5_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UCV5_VOLCA) HSP 1 Score: 91.3 bits (225), Expect = 3.590e-18 Identity = 66/176 (37.50%), Postives = 89/176 (50.57%), Query Frame = 1 Query: 1 RPADFIFPRLGR-LLGFSGPWLDDREAGYYADPPETLDAAVTVVFVALAIGADRLLVLAFHGDMLWPLSLSVLGVIAAGVFEIGRPRMLRREEAEEERRTEEDFLAFAEERLERRGTVHISEVRTAFRQYNPRYRTAAGISDIAIERLARRWHAGEQRS--GYMRGLSLRKDADIF 519 RP+D+I +L R LG + +D EA P L + +A + L A GD +W LS +AAGV+E+GRPR L EEA + + DF+ FAE RL R G H S+V AFR+ PRYR+ + D + L R WH+ R+ GY R LSL + F Sbjct: 1181 RPSDWIIMQLARGPLGLN--IIDVNEA------PAWLSYIAAGICLAAGLAISFSLQ-AGLGDSIWALSTGTGACLAAGVYEVGRPRRLSLEEARQLDQQWRDFVTFAESRLVRSGRCHESDVAAAFRRELPRYRSREALPDAVLRDLIRTWHSDADRTPNGYYRNLSLSPRINAF 1347
BLAST of mRNA_P-wetherbeei_contig9836.2.1 vs. uniprot
Match: A0A835SJ79_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SJ79_CHLIN) HSP 1 Score: 88.2 bits (217), Expect = 6.890e-18 Identity = 65/176 (36.93%), Postives = 89/176 (50.57%), Query Frame = 1 Query: 1 RPADFIFPRLGR-LLGFSGPWLDDREAGYYADPPETLDAAVTVVFVALAIGADRLLVLAFHGDMLWPLSLSVLGVIAAGVFEIGRPRMLRREEAEEERRTEEDFLAFAEERLERRGTVHISEVRTAFRQYNPRYRTAAGISDIAIERLARRWHAGEQRS--GYMRGLSLRKDADIF 519 RP+D+I L R LG P D EA P L V +A + +L A GD +W LS +AAGV+E+GRP+ + REEA E DF+ +A RL R G H SE++TAFR+ PRYR+ ++D L R W R+ G+ RG+SL+ + F Sbjct: 73 RPSDWIILGLARGPLGL--PISDVNEA------PGWLSGVAAGVCLASGLAISAVLQ-AGLGDSIWALSTGTGACLAAGVYEVGRPKRMNREEAAELDDQWRDFVGWANGRLVRSGRCHESELQTAFRKQFPRYRSQDALTDATFRSLVRNWAPDVDRTPNGFYRGVSLKPRVNEF 239
BLAST of mRNA_P-wetherbeei_contig9836.2.1 vs. uniprot
Match: A0A8J4F7U0_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F7U0_9CHLO) HSP 1 Score: 89.4 bits (220), Expect = 7.860e-18 Identity = 68/180 (37.78%), Postives = 92/180 (51.11%), Query Frame = 1 Query: 1 RPADFIFPRLGR-LLGFSGPWLDDREAGYYADPPETLD---AAVTVVF-VALAIGADRLLVLAFHGDMLWPLSLSVLGVIAAGVFEIGRPRMLRREEAEEERRTEEDFLAFAEERLERRGTVHISEVRTAFRQYNPRYRTAAGISDIAIERLARRWHAGEQRS--GYMRGLSLRKDADIF 519 RP+D++ +L R LG LD EA P L A + +V +A+++G L GD +W LS +AAGV+E+GRP+ L EEA + + DF+ FAE RL R G H SEV A R+ PRYR+ +SD + L R WH R+ GY R LSL + F Sbjct: 156 RPSDWMIMQLARGPLGLD--ILDVNEA------PSCLTYIAAGICLVSGLAISVGLQAGL-----GDSIWALSTGTGACLAAGVYEVGRPKRLNLEEARQLDQQWRDFVGFAESRLVRSGRCHESEVAAALRRELPRYRSQEALSDGVLRDLIRNWHPDVDRTPNGYYRNLSLAARVNAF 322 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9836.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9836.2.1 >prot_P-wetherbeei_contig9836.2.1 ID=prot_P-wetherbeei_contig9836.2.1|Name=mRNA_P-wetherbeei_contig9836.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp RPADFIFPRLGRLLGFSGPWLDDREAGYYADPPETLDAAVTVVFVALAIGback to top mRNA from alignment at P-wetherbeei_contig9836:1596..2452- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9836.2.1 ID=mRNA_P-wetherbeei_contig9836.2.1|Name=mRNA_P-wetherbeei_contig9836.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=857bp|location=Sequence derived from alignment at P-wetherbeei_contig9836:1596..2452- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9836:1596..2452- >mRNA_P-wetherbeei_contig9836.2.1 ID=mRNA_P-wetherbeei_contig9836.2.1|Name=mRNA_P-wetherbeei_contig9836.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig9836:1596..2452- (Phaeothamnion wetherbeei SAG_119_79)back to top |