mRNA_P-wetherbeei_contig9829.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9829.1.1
Unique NamemRNA_P-wetherbeei_contig9829.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig9829.1.1 vs. uniprot
Match: D8LK05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK05_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 4.710e-37
Identity = 73/154 (47.40%), Postives = 104/154 (67.53%), Query Frame = 1 
Query:    7 QVMGDATETGLLRMVAAAL----DIDALRKTFPSALDVPFNSREKYALSIRRTPHANGSFTLYLKGAPERVLRRCTTVLVDGEEKDISAESAAVEFQKQFISAYEALAGEGQRVIACAMLELDGATFDPAFMFDADAANFPMQGLTFVGLTGLQ 456
            +++GDATE+GL+R  A  L    D+DA R  +P  +D+PF+S  K++LSI R PH+ G+ TL+ KGAPERVL +C++ L  G+ +D    +    F+  + +AYE LAG G+RV+ACAM+ LDGA F   F FD   ANFP +G +F+GL GL+
Sbjct:  339 KIIGDATESGLVRFAAFRLLGNEDVDAFRDQYPKVMDLPFDSGRKWSLSIHRKPHSKGALTLFAKGAPERVLAKCSSALGKGQAEDAPFVALDRAFEVSYQAAYEELAGRGERVLACAMMPLDGAEFPEDFEFDD--ANFPQEGWSFIGLVGLR 490
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BLAST of mRNA_P-wetherbeei_contig9829.1.1 vs. uniprot
Match: A0A6H5JGR4_9PHAE (Cation_ATPase_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR4_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 6.570e-37
Identity = 73/154 (47.40%), Postives = 104/154 (67.53%), Query Frame = 1 
Query:    7 QVMGDATETGLLRMVAAAL----DIDALRKTFPSALDVPFNSREKYALSIRRTPHANGSFTLYLKGAPERVLRRCTTVLVDGEEKDISAESAAVEFQKQFISAYEALAGEGQRVIACAMLELDGATFDPAFMFDADAANFPMQGLTFVGLTGLQ 456
            +++GDATE+GL+R  A  L    D+DA R  +P  +D+PF+S  K++LSI R PH+ G+ TL+ KGAPERVL +C++ L  G+ +D    +    F+  + +AYE LAG G+RV+ACAM+ LDGA F   F FD   ANFP +G +F+GL GL+
Sbjct:  585 KIIGDATESGLVRFAAFRLLGNEDVDAFRDQYPKVMDLPFDSGRKWSLSIHRKPHSKGALTLFAKGAPERVLAKCSSALGRGQAEDAPFVALDRAFELSYQAAYEELAGRGERVLACAMMPLDGAEFPEDFEFDD--ANFPQEGWSFIGLVGLR 736
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BLAST of mRNA_P-wetherbeei_contig9829.1.1 vs. uniprot
Match: A0A1Y1VYW4_9FUNG (Cation_ATPase_N domain-containing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1VYW4_9FUNG)

HSP 1 Score: 134 bits (338), Expect = 1.490e-33
Identity = 67/153 (43.79%), Postives = 97/153 (63.40%), Query Frame = 1 
Query:    4 QQVMGDATETGLLRMVAAAL--DIDALRKTFPSALDVPFNSREKYALSIRRTPHANGSFTLYLKGAPERVLRRCTTVLVDGEEKDISAESAAVEFQKQFISAYEALAGEGQRVIACAMLELDGATFDPAFMFDADAANFPMQGLTFVGLTGLQ 456
            +Q++GDATE+GL+R   A L  + D L    P   ++PFNS  K+ LS+ +  HANG+ TL +KGAPER+LR C+T+L DG+  +++ E   +     +   YE +A +G RV+A A L+LDG+ F   + FD  A N+P  G TFVGLT L+
Sbjct:  441 RQLLGDATESGLVRFAGAKLGQEFDELLPQHPKVFEIPFNSANKWMLSVHKLAHANGALTLLIKGAPERILRLCSTILYDGQTIELTDEHRGM-----YNETYEYMASQGHRVLAFAQLQLDGSQFPETYQFDKKAENYPTAGYTFVGLTSLE 588
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BLAST of mRNA_P-wetherbeei_contig9829.1.1 vs. uniprot
Match: E3JYQ2_PUCGT (Cation_ATPase_N domain-containing protein n=7 Tax=Puccinia TaxID=5296 RepID=E3JYQ2_PUCGT)

HSP 1 Score: 134 bits (338), Expect = 1.500e-33
Identity = 69/151 (45.70%), Postives = 93/151 (61.59%), Query Frame = 1 
Query:    4 QQVMGDATETGLLRMVAAALDIDALRKTFPSALDVPFNSREKYALSIRRTPHANGSFTLYLKGAPERVLRRCTTVLVDGEEKDISAESAAVEFQKQFISAYEALAGEGQRVIACAMLELDGATFDPAFMFDADAANFPMQGLTFVGLTGLQ 456
            ++++GDATE+GL R     L+ D +R+  P A  +PFNS  K+AL + + PHANG  TLYLKGAPERVL RC+ VL++GE   ++ +     F+K +  AY+ +A  G RVIACA L L G  F   F F     N P + L FVGL  L+
Sbjct:  499 REILGDATESGLTRFAGKNLEFDQVREKHPEAYSIPFNSTAKWALVVSQKPHANGDLTLYLKGAPERVLERCSHVLINGESVPVTEQ-----FKKDYGEAYQYMASRGHRVIACAQLLLPGDQFPRDFEFSKKDDNCPTENLCFVGLISLE 644
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BLAST of mRNA_P-wetherbeei_contig9829.1.1 vs. uniprot
Match: O43134_BLAEM (P-type cation-transporting ATPase n=2 Tax=Blastocladiella emersonii TaxID=4808 RepID=O43134_BLAEM)

HSP 1 Score: 134 bits (337), Expect = 2.030e-33
Identity = 70/152 (46.05%), Postives = 98/152 (64.47%), Query Frame = 1 
Query:    4 QQVMGDATETGLLRMVAAAL-DIDALRKTFPSALDVPFNSREKYALSIRRTPHANGSFTLYLKGAPERVLRRCTTVLVDGEEKDISAESAAVEFQKQFISAYEALAGEGQRVIACAMLELDGATFDPAFMFDADAANFPMQGLTFVGLTGLQ 456
            ++++GDATETGL R+    + D D L   +P  L++PFNS  K+ +SI +  HANGSFT ++KGAPERVLR C+T+L D  +     +    E + QF +AYE +A +G RV+A A  EL G  +  + +FD +  NFPM GLTFVGL  L+
Sbjct:  422 REIIGDATETGLYRLATQKIRDFDQLADKYPKVLEIPFNSDTKWHMSIHKMAHANGSFTTFIKGAPERVLRICSTILDDNGDTIPLTD----EHKIQFNTAYEYMASKGHRVLAFAKFELPGTEYPESHVFDKELKNFPMAGLTFVGLASLE 569
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BLAST of mRNA_P-wetherbeei_contig9829.1.1 vs. uniprot
Match: A0A0C4EPX9_PUCT1 (Cation_ATPase_N domain-containing protein n=5 Tax=Puccinia TaxID=5296 RepID=A0A0C4EPX9_PUCT1)

HSP 1 Score: 134 bits (336), Expect = 2.770e-33
Identity = 70/151 (46.36%), Postives = 94/151 (62.25%), Query Frame = 1 
Query:    4 QQVMGDATETGLLRMVAAALDIDALRKTFPSALDVPFNSREKYALSIRRTPHANGSFTLYLKGAPERVLRRCTTVLVDGEEKDISAESAAVEFQKQFISAYEALAGEGQRVIACAMLELDGATFDPAFMFDADAANFPMQGLTFVGLTGLQ 456
            ++++GDATE+GL R     L+ D +R+  P A  +PFNS  K+AL + + PH+NG  TLYLKGAPERVL RC+ VLV+GE   I+ +     F+K++  AY+ +A  G RVIACA L L G  F   F F     N P + L FVGL  L+
Sbjct:  459 REILGDATESGLTRFAGKNLEFDQVREKHPEAYSIPFNSTAKWALVVVQKPHSNGDLTLYLKGAPERVLDRCSHVLVNGESIPITEQ-----FKKEYGEAYQYMASRGHRVIACAQLLLPGDQFPRDFAFSKKDDNCPTENLCFVGLVSLE 604
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BLAST of mRNA_P-wetherbeei_contig9829.1.1 vs. uniprot
Match: A0A835YZ03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ03_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.750e-33
Identity = 71/151 (47.02%), Postives = 97/151 (64.24%), Query Frame = 1 
Query:    4 QQVMGDATETGLLRMVAAALDIDALRKTFPSALDVPFNSREKYALSIRRTPHANGSFTLYLKGAPERVLRRCTTVLVDGEEKDISAESAAVEFQKQFISAYEALAGEGQRVIACAMLELDGATFDPAFMFDADAANFPMQGLTFVGLTGLQ 456
            ++V+GDATET LLR +A   D+D L+ ++P AL+VPFNS  K+A  +    ++ G++T+YLKGAPERV+RRCT     G +      S   + Q  F + YE +AG GQRVIACA LELD A +     FDAD  +FP + + F+GL  LQ
Sbjct:  346 REVIGDATETALLRHIANTEDVDELKSSYPPALEVPFNSDRKWAAGV--FSNSRGAYTVYLKGAPERVIRRCTQYFNHGSDDAADLCSMDNDLQAAFQATYEKMAGRGQRVIACAALELDPAKYPNGTQFDAD--SFPSENMVFLGLVALQ 492
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BLAST of mRNA_P-wetherbeei_contig9829.1.1 vs. uniprot
Match: A0A2N5TGC8_9BASI (Cation_ATPase_N domain-containing protein (Fragment) n=1 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5TGC8_9BASI)

HSP 1 Score: 132 bits (331), Expect = 1.280e-32
Identity = 70/151 (46.36%), Postives = 91/151 (60.26%), Query Frame = 1 
Query:    4 QQVMGDATETGLLRMVAAALDIDALRKTFPSALDVPFNSREKYALSIRRTPHANGSFTLYLKGAPERVLRRCTTVLVDGEEKDISAESAAVEFQKQFISAYEALAGEGQRVIACAMLELDGATFDPAFMFDADAANFPMQGLTFVGLTGLQ 456
            ++++GDATE+GL R     L+ D +R+  P    +PFNS  K+AL + + PHANG  TLYLKGAPERVL RC+  LV+GE   I+ +     F+ Q+  AY+ +A  G RVIACA L L  A F   F F     N P Q L FVGL  L+
Sbjct:  496 REILGDATESGLTRFAGKNLEFDQVREKHPETYSIPFNSTAKWALVVVQKPHANGDLTLYLKGAPERVLDRCSHALVNGESVPITEQ-----FKTQYGEAYQYMASRGHRVIACAQLLLPSAQFPRDFEFSKKDDNCPTQNLCFVGLVSLE 641
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BLAST of mRNA_P-wetherbeei_contig9829.1.1 vs. uniprot
Match: A0A2N5W4G5_9BASI (Cation_ATPase_C domain-containing protein n=3 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5W4G5_9BASI)

HSP 1 Score: 132 bits (331), Expect = 1.320e-32
Identity = 70/151 (46.36%), Postives = 91/151 (60.26%), Query Frame = 1 
Query:    4 QQVMGDATETGLLRMVAAALDIDALRKTFPSALDVPFNSREKYALSIRRTPHANGSFTLYLKGAPERVLRRCTTVLVDGEEKDISAESAAVEFQKQFISAYEALAGEGQRVIACAMLELDGATFDPAFMFDADAANFPMQGLTFVGLTGLQ 456
            ++++GDATE+GL R     L+ D +R+  P    +PFNS  K+AL + + PHANG  TLYLKGAPERVL RC+  LV+GE   I+ +     F+ Q+  AY+ +A  G RVIACA L L  A F   F F     N P Q L FVGL  L+
Sbjct:  573 REILGDATESGLTRFAGKNLEFDQVREKHPETYSIPFNSTAKWALVVVQKPHANGDLTLYLKGAPERVLDRCSHALVNGESVPITEQ-----FKTQYGEAYQYMASRGHRVIACAQLLLPSAQFPRDFEFSKKDDNCPTQNLCFVGLVSLE 718
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BLAST of mRNA_P-wetherbeei_contig9829.1.1 vs. uniprot
Match: A0A507FBV0_9FUNG (Cation_ATPase_N domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FBV0_9FUNG)

HSP 1 Score: 130 bits (327), Expect = 4.500e-32
Identity = 69/150 (46.00%), Postives = 91/150 (60.67%), Query Frame = 1 
Query:   10 VMGDATETGLLRMVAAAL-DIDALRKTFPSALDVPFNSREKYALSIRRTPHANGSFTLYLKGAPERVLRRCTTVLVDGEEKDISAESAAVEFQKQFISAYEALAGEGQRVIACAMLELDGATFDPAFMFDADAANFPMQGLTFVGLTGLQ 456
            + GDATE+GL R  +  L DID L   +P   ++PFNS  K+A++I +  HA G  TL +KGAPER+LR CTT+L     KD  A     E Q +F ++YE +AG+G RV+A A L L G  +   F F  D  N+P  GLTFVGL  L+
Sbjct:  424 ITGDATESGLFRFASQKLLDIDKLHDMYPKVFEIPFNSENKWAMAIHKKKHAEGPLTLLMKGAPERILRICTTIL-----KDHKAIPMTKEHQDEFTTSYEYMAGKGHRVLAFAQLLLPGGEYPEDFAFTKDPKNYPSTGLTFVGLASLE 568
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9829.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK05_ECTSI4.710e-3747.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGR4_9PHAE6.570e-3747.40Cation_ATPase_N domain-containing protein n=1 Tax=... [more]
A0A1Y1VYW4_9FUNG1.490e-3343.79Cation_ATPase_N domain-containing protein n=1 Tax=... [more]
E3JYQ2_PUCGT1.500e-3345.70Cation_ATPase_N domain-containing protein n=7 Tax=... [more]
O43134_BLAEM2.030e-3346.05P-type cation-transporting ATPase n=2 Tax=Blastocl... [more]
A0A0C4EPX9_PUCT12.770e-3346.36Cation_ATPase_N domain-containing protein n=5 Tax=... [more]
A0A835YZ03_9STRA3.750e-3347.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2N5TGC8_9BASI1.280e-3246.36Cation_ATPase_N domain-containing protein (Fragmen... [more]
A0A2N5W4G5_9BASI1.320e-3246.36Cation_ATPase_C domain-containing protein n=3 Tax=... [more]
A0A507FBV0_9FUNG4.500e-3246.00Cation_ATPase_N domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9829contigP-wetherbeei_contig9829:81..855 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LK05
PFAMsCation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase
Model size483
Max annot lvl2759|Eukaryota
KEGG koko:K01539,ko:K01544
KEGG TC3.A.3.1,3.A.3.1.4
KEGG Pathwayko00190,ko04022,ko04024,ko04260,ko04261,ko04911,ko04918,ko04919,ko04925,ko04960,ko04961,ko04964,ko04970,ko04971,ko04972,ko04973,ko04974,ko04976,ko04978,map00190,map04022,map04024,map04260,map04261,map04911,map04918,map04919,map04925,map04960,map04961,map04964,map04970,map04971,map04972,map04973,map04974,map04976,map04978
Hectar predicted targeting categoryother localisation
Exons2
Evalue7.72e-38
EggNOG OGsCOG0474@1|root,KOG0203@2759|Eukaryota
EC3.6.3.10,3.6.3.9
Descriptionsodium:potassium-exchanging ATPase activity
Cds size483
COG categoryP
BRITEko00000,ko00001,ko01000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187112.2530012-CDS-P-wetherbeei_contig9829:80..3741683187112.2530012-CDS-P-wetherbeei_contig9829:80..374Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9829 81..374 -
1683187112.271759-CDS-P-wetherbeei_contig9829:666..8551683187112.271759-CDS-P-wetherbeei_contig9829:666..855Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9829 667..855 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9829.1.1prot_P-wetherbeei_contig9829.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9829 81..855 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9829.1.1

>prot_P-wetherbeei_contig9829.1.1 ID=prot_P-wetherbeei_contig9829.1.1|Name=mRNA_P-wetherbeei_contig9829.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=161bp
MQQVMGDATETGLLRMVAAALDIDALRKTFPSALDVPFNSREKYALSIRR
TPHANGSFTLYLKGAPERVLRRCTTVLVDGEEKDISAESAAVEFQKQFIS
AYEALAGEGQRVIACAMLELDGATFDPAFMFDADAANFPMQGLTFVGLTG
LQVRWAWLAG*
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mRNA from alignment at P-wetherbeei_contig9829:81..855-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9829.1.1 ID=mRNA_P-wetherbeei_contig9829.1.1|Name=mRNA_P-wetherbeei_contig9829.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=775bp|location=Sequence derived from alignment at P-wetherbeei_contig9829:81..855- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAACAGGTGATGGGCGACGCGACGGAGACGGGGCTGCTGCGGATGGT
GGCGGCGGCGCTCGACATCGACGCGCTCCGCAAGACGTTCCCCTCGGCGC
TCGACGTGCCCTTCAACTCCCGCGAGAAGTACGCCCTCTCCATCCGCCGG
ACGCCGCACGCCAACGGCTCCTTCACGCTCTACCTCAAGGTTGGTTGGTC
AGCTTGCACACGGGTTTTTGTTGCTCTTTCCGATTTCCGTCTCTTTGTGC
GACACGTTTCAGATGTTTGCGTCTTTCTTTCTGGATGTTTCCCCTGTCAA
TCCGTTCGCAGTCGGTGGATGGGCTGACGCTGTAAAATGCTGTTTCGGCT
GCTCTCACGGTTGAAGGCAGTGTATCAACTTTGTGTCATCCTGGTATCCC
CGTTTCGGAAAAATGGTGCCAGCGTTGTCTCTGTCTGGGCCACAATGTTC
CTTTCGCGCTTGTCTATCTGCCTGCCTGCAGGGTGCTCCGGAGCGCGTGC
TCCGCCGCTGCACGACGGTGCTGGTGGACGGCGAGGAGAAGGACATCTCC
GCTGAGTCGGCGGCCGTCGAATTCCAGAAGCAGTTCATCTCGGCCTACGA
GGCGTTGGCCGGAGAGGGGCAGCGCGTCATCGCCTGCGCCATGCTAGAGC
TCGACGGCGCCACGTTCGACCCCGCCTTTATGTTTGATGCCGACGCCGCC
AACTTTCCGATGCAGGGTCTCACTTTCGTCGGCCTCACGGGCCTCCAGGT
GCGTTGGGCATGGCTGGCTGGCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9829:81..855-

>mRNA_P-wetherbeei_contig9829.1.1 ID=mRNA_P-wetherbeei_contig9829.1.1|Name=mRNA_P-wetherbeei_contig9829.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig9829:81..855- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAACAGGTGATGGGCGACGCGACGGAGACGGGGCTGCTGCGGATGGT
GGCGGCGGCGCTCGACATCGACGCGCTCCGCAAGACGTTCCCCTCGGCGC
TCGACGTGCCCTTCAACTCCCGCGAGAAGTACGCCCTCTCCATCCGCCGG
ACGCCGCACGCCAACGGCTCCTTCACGCTCTACCTCAAGGGTGCTCCGGA
GCGCGTGCTCCGCCGCTGCACGACGGTGCTGGTGGACGGCGAGGAGAAGG
ACATCTCCGCTGAGTCGGCGGCCGTCGAATTCCAGAAGCAGTTCATCTCG
GCCTACGAGGCGTTGGCCGGAGAGGGGCAGCGCGTCATCGCCTGCGCCAT
GCTAGAGCTCGACGGCGCCACGTTCGACCCCGCCTTTATGTTTGATGCCG
ACGCCGCCAACTTTCCGATGCAGGGTCTCACTTTCGTCGGCCTCACGGGC
CTCCAGGTGCGTTGGGCATGGCTGGCTGGCTAG
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