mRNA_P-wetherbeei_contig9798.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9798.1.1 vs. uniprot
Match: A0A7S3H6G5_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6G5_9STRA) HSP 1 Score: 342 bits (878), Expect = 2.830e-114 Identity = 165/215 (76.74%), Postives = 182/215 (84.65%), Query Frame = 1 Query: 1 VLPSSALQVYGDPQEHPQRETYWGNVNPVGPRACYDEGKRVAETMMYAYQLQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDITIYGDGSQTRSFQYVDDLVNGLISLMNGGYSQPVNIGNPSEYTVLKFAQMIKEKTGSKSKIVHLPATVDDPSKRKPDITVAKRELGWAPNVPVEEGIARTIEYFRKELEIIGPIAATGPDASKP 645 +L +S +VYGDP++HPQ+ETYWGNVNP+GPRACYDEGKRVAETMMYAY+ Q LEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQ+KDITIYG+G QTRSFQYVDDLVNGLI LMNG YSQPVNIGNP EYTV +FA MIKE T S S I LPAT DDP KRKPDITVA RE+GW P +PV G+ +TI YFR EL + G I TGPDA+KP Sbjct: 223 MLLTSTSEVYGDPEQHPQKETYWGNVNPIGPRACYDEGKRVAETMMYAYESQLDLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQNKDITIYGNGEQTRSFQYVDDLVNGLIKLMNGNYSQPVNIGNPDEYTVKEFAVMIKEITNSTSTIKMLPATKDDPRKRKPDITVAGREIGWKPEIPVRFGLEQTIAYFRNELLLSGEIVPTGPDAAKP 437
BLAST of mRNA_P-wetherbeei_contig9798.1.1 vs. uniprot
Match: A0A6H5KWP6_9PHAE (UDP-glucuronate decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWP6_9PHAE) HSP 1 Score: 338 bits (868), Expect = 3.260e-112 Identity = 161/215 (74.88%), Postives = 182/215 (84.65%), Query Frame = 1 Query: 1 VLPSSALQVYGDPQEHPQRETYWGNVNPVGPRACYDEGKRVAETMMYAYQLQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDITIYGDGSQTRSFQYVDDLVNGLISLMNGGYSQPVNIGNPSEYTVLKFAQMIKEKTGSKSKIVHLPATVDDPSKRKPDITVAKRELGWAPNVPVEEGIARTIEYFRKELEIIGPIAATGPDASKP 645 +L +S +VYGDP+EHPQRETYWGNVNP+GPRACYDEGKRVAETMMYAY+ QG +EVRVARIFNTFGPRMHPNDGRVVSNFIIQA+Q KDITIYGDGSQTRSFQYVDDLV GLI+LMN YS PVNIGNP EYTV FA++IK T S SKI+ + T DDP+KRKPDIT+AK+EL W P V V++G+ TI+YFR EL+ G I TGPDASKP Sbjct: 258 MLLTSTSEVYGDPEEHPQRETYWGNVNPIGPRACYDEGKRVAETMMYAYENQGEMEVRVARIFNTFGPRMHPNDGRVVSNFIIQAIQGKDITIYGDGSQTRSFQYVDDLVRGLIALMNSNYSGPVNIGNPDEYTVKDFAELIKSSTESTSKIIFMDGTKDDPNKRKPDITLAKKELRWEPTVAVKDGLVETIKYFRGELKKTGEIIPTGPDASKP 472
BLAST of mRNA_P-wetherbeei_contig9798.1.1 vs. uniprot
Match: A0A836C7X9_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X9_9STRA) HSP 1 Score: 330 bits (845), Expect = 1.750e-109 Identity = 159/216 (73.61%), Postives = 180/216 (83.33%), Query Frame = 1 Query: 1 VLPSSALQVYGDPQEHPQRETYWGNVNPVGPRACYDEGKRVAETMMYAYQLQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDITIYGDGSQTRSFQYVDDLVNGLISLMNGGYSQPVNIGNPSEYTVLKFAQMIKEKTGSKSKIVHLPATVDDPSKRKPDITVAKRELGWAPNVPVEEGIARTIEYFRKELEIIGPIAATGPDASKPG 648 +L +S +VYGDP+EHPQRETYWG+VN +GPRACYDEGKRVAETMMYAY QGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQ KD+TIYGDGSQTRSFQYVDDLV+GL+ LMN Y PVNIGNP E++V +FA +IK+ TGS S+I HLPAT DDP KRKPDI +AKRELGW P V V +G+A TI +F+ L+ G I TGP A KPG Sbjct: 211 MLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLTGSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFFKGVLKS-GEIVPTGPKAVKPG 425
BLAST of mRNA_P-wetherbeei_contig9798.1.1 vs. uniprot
Match: A0A7S1FTM8_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FTM8_9STRA) HSP 1 Score: 330 bits (847), Expect = 4.300e-109 Identity = 154/215 (71.63%), Postives = 183/215 (85.12%), Query Frame = 1 Query: 1 VLPSSALQVYGDPQEHPQRETYWGNVNPVGPRACYDEGKRVAETMMYAYQLQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDITIYGDGSQTRSFQYVDDLVNGLISLMNGGYSQPVNIGNPSEYTVLKFAQMIKEKTGSKSKIVHLPATVDDPSKRKPDITVAKRELGWAPNVPVEEGIARTIEYFRKELEIIGPIAATGPDASKP 645 +L +S +VYGDP+ HPQ E+YWGNVN VGPR+CYDEGKRVAETMMY+Y+ Q ++VRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKD+T+YG GSQ+RSFQYVDDLV+GL+ LMNG Y PVN+GNP EYTV +FA+ IKEKT SKS+IV+LPA+ DDP +RKPDITVAK ++GW P V VEEG+ +TIEYF++ LE G I TGP A+KP Sbjct: 261 ILLTSTSEVYGDPEVHPQPESYWGNVNTVGPRSCYDEGKRVAETMMYSYRDQSKVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDLTVYGSGSQSRSFQYVDDLVDGLVKLMNGNYDMPVNLGNPDEYTVRQFAEHIKEKTQSKSRIVNLPASTDDPQQRKPDITVAKTKIGWEPKVKVEEGLEKTIEYFKRVLEDAGEIIPTGPGAAKP 475
BLAST of mRNA_P-wetherbeei_contig9798.1.1 vs. uniprot
Match: A0A7S2FJ01_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJ01_9STRA) HSP 1 Score: 323 bits (829), Expect = 2.960e-108 Identity = 150/215 (69.77%), Postives = 179/215 (83.26%), Query Frame = 1 Query: 1 VLPSSALQVYGDPQEHPQRETYWGNVNPVGPRACYDEGKRVAETMMYAYQLQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDITIYGDGSQTRSFQYVDDLVNGLISLMNGGYSQPVNIGNPSEYTVLKFAQMIKEKTGSKSKIVHLPATVDDPSKRKPDITVAKRELGWAPNVPVEEGIARTIEYFRKELEIIGPIAATGPDASKP 645 +L +S ++YGDP+ HPQ ETYWG+VN +GPRACYDEGKRVAETMMYAY+ Q G++VRVARIFNTFGPRMHPNDGRVVSNFIIQALQ K +TIYG+G+QTRSFQYVDDLVNGL+ LMNG Y PVN+GNP EYT+ FA +I + T + S I+H+PAT DDP +RKPDIT+AK ++GW P V V+EGI +TI+YFRKEL G I TGPDAS+P Sbjct: 125 MLLTSTSEIYGDPEVHPQPETYWGHVNAIGPRACYDEGKRVAETMMYAYKKQEGVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKPMTIYGEGAQTRSFQYVDDLVNGLMKLMNGDYDMPVNLGNPDEYTIKDFATVIHKFTDTNSTIIHMPATEDDPRQRKPDITIAKSKIGWQPQVAVDEGIRKTIDYFRKELMDTGEIIPTGPDASRP 339
BLAST of mRNA_P-wetherbeei_contig9798.1.1 vs. uniprot
Match: A0A7S2UT44_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT44_9STRA) HSP 1 Score: 327 bits (837), Expect = 1.060e-107 Identity = 154/220 (70.00%), Postives = 182/220 (82.73%), Query Frame = 1 Query: 1 VLPSSALQVYGDPQEHPQRETYWGNVNPVGPRACYDEGKRVAETMMYAYQLQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDITIYGDGSQTRSFQYVDDLVNGLISLMNGGYSQPVNIGNPSEYTVLKFAQMIKEKTGSKSKIVHLPATVDDPSKRKPDITVAKRELGWAPNVPVEEGIARTIEYFRKELEIIGPIAATGPDASKPGVHAT 660 +L +S +VYGDP+E+PQ+ETYWGNVNP+GPRACYDEGKRVAETMMYAYQ Q G++VRVARIFNTFGPRMHPNDGRVVSNFIIQALQ KDIT+YG+GSQTRSFQYVDDLV GLI LMN YS PVN+GNP EY+++KFA I T S S++VHLPAT DDP +RKPDI VAK+EL W P V++G++ T+EYF++EL G I TGP+ SKP A+ Sbjct: 247 ILLTSTSEVYGDPKENPQKETYWGNVNPIGPRACYDEGKRVAETMMYAYQRQAGVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITVYGEGSQTRSFQYVDDLVEGLIRLMNSDYSDPVNLGNPDEYSIVKFAHSIVAITNSSSQVVHLPATQDDPHQRKPDIGVAKKELQWHPVWQVKDGLSETVEYFKQELMRTGEITPTGPNPSKPRGRAS 466
BLAST of mRNA_P-wetherbeei_contig9798.1.1 vs. uniprot
Match: B8C6B9_THAPS (UDP-glucuronate decarboxylase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6B9_THAPS) HSP 1 Score: 323 bits (828), Expect = 1.640e-107 Identity = 148/215 (68.84%), Postives = 177/215 (82.33%), Query Frame = 1 Query: 1 VLPSSALQVYGDPQEHPQRETYWGNVNPVGPRACYDEGKRVAETMMYAYQLQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDITIYGDGSQTRSFQYVDDLVNGLISLMNGGYSQPVNIGNPSEYTVLKFAQMIKEKTGSKSKIVHLPATVDDPSKRKPDITVAKRELGWAPNVPVEEGIARTIEYFRKELEIIGPIAATGPDASKP 645 +L +S ++YGDP HPQ E+YWGNV+ +GPRACYDEGKRVAETMMYAY+ Q + +R+ARIFNTFGPRMHPNDGRVVSNFIIQ+LQ+KDITIYGDG+QTRSFQYVDDL+NGL+ LMNG Y PVNIGNP EY++ FA I++ T SKS+I LP DDPS+R+PDI+ AKRELGW+P V VEEG+ +TIEYF+ E+E G I TGPDA KP Sbjct: 168 ILLASTSEIYGDPTVHPQPESYWGNVHTIGPRACYDEGKRVAETMMYAYKNQNNVSIRIARIFNTFGPRMHPNDGRVVSNFIIQSLQNKDITIYGDGAQTRSFQYVDDLINGLVKLMNGSYDSPVNIGNPDEYSIKDFATKIRDMTNSKSEIKFLPKVADDPSQREPDISTAKRELGWSPKVSVEEGLKKTIEYFKGEVESAGEIVPTGPDAVKP 382
BLAST of mRNA_P-wetherbeei_contig9798.1.1 vs. uniprot
Match: F0YDD8_AURAN (UDP-glucuronate decarboxylase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDD8_AURAN) HSP 1 Score: 320 bits (821), Expect = 6.940e-107 Identity = 156/220 (70.91%), Postives = 180/220 (81.82%), Query Frame = 1 Query: 1 VLPSSALQVYGDPQEHPQRETYWGNVNPVGPRACYDEGKRVAETMMYAYQLQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDITIYGDGSQTRSFQYVDDLVNGLISLMNGGYSQPVNIGNPSEYTVLKFAQMIKEKTGSKSKIVHLPATVDDPSKRKPDITVAKRELGWAPNVPVEEGIARTIEYFRKEL-EIIGPIAATGPDASKPGVHA 657 +L +S ++YGDP+ HPQ ETYWGNVNP+GPRACYDEGKRVAETMMY+Y Q G+EVRVARIFNTFG RMHPNDGRVVSNFIIQALQ+KDIT+YGDGSQTRSFQ+VDDLV+GL +LMN YS PVN+GNP EYTV FA+ IK+ TGS+SKIV LPAT DDP +RKPDIT AK +GW P V G+A TIEYF++EL ++ G I TGP ASKP A Sbjct: 133 MLLASTSEIYGDPEVHPQVETYWGNVNPIGPRACYDEGKRVAETMMYSYNRQLGVEVRVARIFNTFGRRMHPNDGRVVSNFIIQALQNKDITLYGDGSQTRSFQFVDDLVDGLHALMNSNYSLPVNLGNPDEYTVAGFAETIKKLTGSRSKIVRLPATTDDPRQRKPDITTAKTHIGWQPKWTVGRGLAETIEYFKRELADMGGSITPTGPLASKPRPRA 352
BLAST of mRNA_P-wetherbeei_contig9798.1.1 vs. uniprot
Match: A0A4D9CY17_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY17_9STRA) HSP 1 Score: 325 bits (833), Expect = 7.110e-107 Identity = 158/224 (70.54%), Postives = 183/224 (81.70%), Query Frame = 1 Query: 1 VLPSSALQVYGDPQEHPQRETYWGNVNPVGPRACYDEGKRVAETMMYAYQLQGG-----LEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDITIYGDGSQTRSFQYVDDLVNGLISLMNGGYSQPVNIGNPSEYTVLKFAQMIKEKTGSK-SKIVHLPATVDDPSKRKPDITVAKRELGWAPNVPVEEGIARTIEYFRKELEIIGPIAATGPDASKPGVH 654 +L +S +VYGDPQ HPQ E+YWGNVNP+GPRACYDEGKRVAETMMYAY+ QGG +EVRVARIFNTFGPRMHPNDGRVVSNFIIQALQ K+ITIYG G QTRSFQYVDDLV+GL+ LMN Y PVN+GNP EY+V FA +++E + S+IVHLPAT DDP+KRKPDIT AK+ELGW P V V +G+A+TIEYFRKELE G I TGP+A++P H Sbjct: 261 MLLTSTSEVYGDPQIHPQPESYWGNVNPIGPRACYDEGKRVAETMMYAYRSQGGEGDSSMEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKNITIYGKGRQTRSFQYVDDLVSGLMKLMNSDYELPVNLGNPDEYSVKDFALLVRELVRNMDSQIVHLPATKDDPAKRKPDITTAKKELGWEPTVSVRDGLAKTIEYFRKELEETGEITPTGPEAARPQPH 484
BLAST of mRNA_P-wetherbeei_contig9798.1.1 vs. uniprot
Match: A0A7S2HWZ1_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HWZ1_9STRA) HSP 1 Score: 315 bits (808), Expect = 9.440e-107 Identity = 151/215 (70.23%), Postives = 173/215 (80.47%), Query Frame = 1 Query: 1 VLPSSALQVYGDPQEHPQRETYWGNVNPVGPRACYDEGKRVAETMMYAYQLQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDITIYGDGSQTRSFQYVDDLVNGLISLMNGGYSQPVNIGNPSEYTVLKFAQMIKEKTGSKSKIVHLPATVDDPSKRKPDITVAKRELGWAPNVPVEEGIARTIEYFRKELEIIGPIAATGPDASKP 645 +L +S ++YGDPQ HPQ ETYWG VN +GPR+CYDEGKRVAETMMY+Y+ Q +EVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDITIYG G QTRSFQYVDDLV GL +LMN Y PVN+GNP EYTV FA+ IKE T SKS+I LP T DDP++RKPDITVAK+ LGW P V V +G+ RTI YFR+ L+ G I TGP+ +KP Sbjct: 14 MLLTSTSEIYGDPQVHPQPETYWGYVNTIGPRSCYDEGKRVAETMMYSYKNQNNVEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQDKDITIYGPGLQTRSFQYVDDLVEGLHALMNSDYDLPVNLGNPDEYTVKDFAEYIKEMTESKSEIKFLPKTEDDPNQRKPDITVAKKNLGWEPKVEVRDGLERTISYFRRVLDDAGEIIPTGPEGAKP 228 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9798.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9798.1.1 >prot_P-wetherbeei_contig9798.1.1 ID=prot_P-wetherbeei_contig9798.1.1|Name=mRNA_P-wetherbeei_contig9798.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=221bp VLPSSALQVYGDPQEHPQRETYWGNVNPVGPRACYDEGKRVAETMMYAYQback to top mRNA from alignment at P-wetherbeei_contig9798:156..2259+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9798.1.1 ID=mRNA_P-wetherbeei_contig9798.1.1|Name=mRNA_P-wetherbeei_contig9798.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2104bp|location=Sequence derived from alignment at P-wetherbeei_contig9798:156..2259+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9798:156..2259+ >mRNA_P-wetherbeei_contig9798.1.1 ID=mRNA_P-wetherbeei_contig9798.1.1|Name=mRNA_P-wetherbeei_contig9798.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig9798:156..2259+ (Phaeothamnion wetherbeei SAG_119_79)back to top |