mRNA_P-wetherbeei_contig9794.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9794.1.1
Unique NamemRNA_P-wetherbeei_contig9794.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9794.1.1 vs. uniprot
Match: A0A835YYK4_9STRA (CBF/Mak21 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYK4_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.500e-62
Identity = 149/328 (45.43%), Postives = 184/328 (56.10%), Query Frame = 1
Query:    1 QVVRAVAKFLRARRFCVHVEALRVLETLPLRVHEDEAGAVRAKAKRMKRGRRRPTAEIPGLNGGDDGVEAALAESRAAADPIVRARAQADALHEVTLVYFRFLKDAEARTAAASARLLPAVLEGLGRVAHLVNLDTVVDLMAALRELLAAGQLTLAGGLACVLVALRTLHGPGRELQVDEKAFLLHLYGLLGRLGTAAGGSGSGXXXXXXXXXRSGRIATLGGEAAGLTALACDCVEAAFIKRKELSAARVAATLKRLCAAAVRTSSAPDAARLLGAARQLALRYPVVRQLLDGGGDRVVAGAYNPDAEDPEAGNPLAATCWELGLLR 984
            +V RAVAKF + R++ +H   LR L  LPLRV EDEAG VRA AK  +R R+               VEA L E+ A  +   R R  ADAL EVTL+YFR LK+           LLPAV+EGL + AHL+NLDTV DL+A L+ LL   +LT    L CVL+A RTL GPGRELQVD+K F++ LY LL RL  AA                                LA +CV+   +KR+E S ARVAA LKR+   A+   S  +A  L+G A  LALRY   RQ+L+   DR  AGAY+   EDP+  NP A +CWEL LL+
Sbjct:  593 EVTRAVAKFAKDRKYTMHERVLRCLCALPLRVREDEAGDVRAAAKSRRRKRKAHD------------VEAELMEAEAKVNASERGRCHADALKEVTLMYFRVLKNHR------HPALLPAVMEGLAKFAHLINLDTVEDLLALLKGLLREEKLTFEASLHCVLMAFRTLQGPGRELQVDDKEFVVRLYALLPRLSDAAN--------------------------RAYVTLATECVDTVLVKRREHSPARVAAFLKRILGLALHFPSG-EAKALIGVAHALALRYGPARQMLENEQDRAAAGAYSALVEDPDHANPFATSCWELSLLK 875          
BLAST of mRNA_P-wetherbeei_contig9794.1.1 vs. uniprot
Match: A0A7S4K774_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K774_9STRA)

HSP 1 Score: 214 bits (544), Expect = 6.160e-61
Identity = 147/331 (44.41%), Postives = 189/331 (57.10%), Query Frame = 1
Query:    1 QVVRAVAKFLRARRFCVHVEALRVLETLPLRVHEDEAGAVRAK--AKRMKRGRRRPTAEIPGLNGGDDGVEAALAESRAAADPIVRARAQADALHEVTLVYFRFLKDAEARTAAASARLLPAVLEGLGRVAHLVNLDTVVDLMAALRELLA-AGQLTLAGGLACVLVALRTLHGPGRELQVDEKAFLLHLYGLLGRLGTAAGGSGSGXXXXXXXXXRSGRIATLGGEAAGLTALACDCVEAAFIKRKELSAARVAATLKRLCAAAVRTSSAPDAARLLGAARQLALRYPVVRQLLDGGGDRVVAGAYNPDAEDPEAGNPLAATCWELGLLR 984
            +  R VAK  + R+  +  E LR L +LPLRVHEDEA A +    A   KR R R  AE          V++ L E  A+ D I+ ARAQ+D L  VTL YFR LK A+  +   +A LLP  LEGL + AHL+N+DTV DL+  LR +L  AG L L   L CVL A +TL GPGRE+Q+D K ++L LY  + RLG+ +G                          A  T LA  C+ +AF++RKE S+ RVAA +KRL +AA+     P +A +L   RQL  RYP  ++LL+   D V +GAY PDAEDPE  NP AA+ WEL LLR
Sbjct:  227 EAARLVAKMAKERKLAIRPEVLRTLLSLPLRVHEDEAQAAKIAQAANAKKRKRDREAAE----------VDSDLKEGEASVDKIILARAQSDTLQAVTLTYFRVLK-ADGLSDGRAAELLPPALEGLAKFAHLINMDTVEDLLDVLRAMLKRAGSLPLDAALNCVLTAFQTLEGPGREMQIDPKEYVLPLYAQIPRLGSESG--------------------------ARHTDLALRCMTSAFLRRKEYSSVRVAAFVKRLSSAALHAPP-PASAAMLCFVRQLLARYPSSQRLLENEQDIVASGAYAPDAEDPEHSNPYAASVWELALLR 519          
BLAST of mRNA_P-wetherbeei_contig9794.1.1 vs. uniprot
Match: A0A7S2VZB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZB6_9STRA)

HSP 1 Score: 199 bits (505), Expect = 4.670e-56
Identity = 131/328 (39.94%), Postives = 176/328 (53.66%), Query Frame = 1
Query:    1 QVVRAVAKFLRARRFCVHVEALRVLETLPLRVHEDEAGAVRAKAKRMKRGRRRPTAEIPGLNGGDDGVEAALAESRAAADPIVRARAQADALHEVTLVYFRFLKDAEARTAAASARLLPAVLEGLGRVAHLVNLDTVVDLMAALRELLAAGQLTLAGGLACVLVALRTLHGPGRELQVDEKAFLLHLYGLLGRLGTAAGGSGSGXXXXXXXXXRSGRIATLGGEAAGLTALACDCVEAAFIKRKELSAARVAATLKRLCAAAVRTSSAPDAARLLGAARQLALRYPVVRQLLDGGGDRVVAGAYNPDAEDPEAGNPLAATCWELGLLR 984
            +  R +AK +R R F +  E LR   +LPLRVHEDEA A +  A+   + R++              +E    E  A  D IV AR Q++ LH VTL YFR LK AE       A LLP  LEGL + +HL+N+DTV+D+++ LR LL    + L   L CV+ A +TL GPGRELQ+DEK +++ LY LL RL +                          G     T L   C+  AFI+RKE S  R+AA +K++    + + S   A  LL   RQ+ +RYP ++QLL+   D V +GAY PDAEDPE  NP A + WEL  L+
Sbjct:  133 EATRYIAKIIRDRSFHIRPEVLRAFVSLPLRVHEDEAEAAKLAAQTNAKRRKKDKESAD--------IERDSREGEAGVDKIVLARCQSETLHAVTLTYFRILK-AEGMDDKRVAILLPPALEGLAKFSHLINMDTVMDVLSVLRGLLKRDDIPLDASLNCVMTAFQTLQGPGRELQIDEKEYVIPLYSLLPRLISE-------------------------GNCDKNTDLMLRCLTLAFIRRKEFSTVRMAAFVKQIYTTCLHSPSYTSAP-LLAFVRQITMRYPFIQQLLENEQDVVTSGAYTPDAEDPEHSNPFATSAWELATLK 425          
BLAST of mRNA_P-wetherbeei_contig9794.1.1 vs. uniprot
Match: W7U347_9STRA (Nucleolar complex protein 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U347_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.550e-55
Identity = 141/324 (43.52%), Postives = 184/324 (56.79%), Query Frame = 1
Query:   16 VAKFLRARRFCVHVEALRVLETLPLRVHEDEAGAVRAKAKRMKRGRRRPTAEIPGLNGGDDGVEAALAESRAAADPIVRARAQADALHEVTLVYFRFLKDAEARTAAASARLLPAVLEGLGRVAHLVNLDTVVDLMAALRELL-AAGQLTLAGGLACVLVALRTLHGPGRELQVDEKAFLLHLYGLLGRLGTAAGGSGSGXXXXXXXXXRSGRIATLGGEAAGLTALACDCVEAAFIKRKELSAARVAATLKRLCAAAVRTSSAPDAARLLGAARQLALRYPVVRQLLDGGGDRVVAGAYNPDAEDPEAGNPLAATCWELGLLR 984
            + K ++ RR     + LR L  L L V EDEA  V  KA R+   +R+          G+  V   L E+ A ADP +RAR Q+++L EVT++YFR LK A   T      LLPA LEGL RVAHL+NLDTVVD++  L+++L     L L   L  VL ALRTL GPGREL+VD+KAFL  LY LLGR+G   G +            RSG           +  L   C+  A ++R+E S ARVAA  KRL   A++ +S  ++  +LG  ++L  RYP + Q+LDG  DRV  G Y PDA +PE  NPLA+  WEL LL+
Sbjct:  504 ICKEMQHRRLQAPEDMLRALHALKLVVKEDEAVEVLRKA-RVHATKRKSQQLEEKEEDGESEVRTGLREAEARADPELRARCQSESLQEVTILYFRVLKQARKPT------LLPAALEGLSRVAHLINLDTVVDVLEVLKDMLDPTRNLPLGASLHAVLTALRTLQGPGRELRVDDKAFLTFLYQLLGRVGM--GLAADSHQDEKRTDARSG---------VTIFPLLVTCLRKALLERREFSLARVAAFYKRLLGLALQLTSPQESQVVLGIVKELPTRYPGLEQMLDGETDRVAMGVYRPDAVEPEMSNPLASGAWELSLLK 809          
BLAST of mRNA_P-wetherbeei_contig9794.1.1 vs. uniprot
Match: A0A448ZJX8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJX8_9STRA)

HSP 1 Score: 185 bits (470), Expect = 5.080e-50
Identity = 130/333 (39.04%), Postives = 175/333 (52.55%), Query Frame = 1
Query:    1 QVVRAVAKFLRARRFCVHVEALRVLETLPLRVHEDEAGAVR--AKAKRMKRGRRRPTAEIPGLNGGDDGVEAALAESRAAADPIVRARAQADALHEVTLVYFRFLKDAEARTAAASARLLPAVLEGLGRVAHLVNLDTVVDLMAALRELLA-AGQLTLAGGLACVLVALRTLHGPGRELQVDEKAFLLHLYGLLGRLGTAAGGSGSGXXXXXXXXXRSGRIATLGGEAAGLTALACDCVEAAFIKRKELSAARVAATLKRLCAAAVRTSSAPD--AARLLGAARQLALRYPVVRQLLDGGGDRVVAGAYNPDAEDPEAGNPLAATCWELGLLR 984
            +  R VAK ++  R  +    +R    LPLRVH DEA A +  A A + KR + R  AEI          E+ L ES    D I+ AR Q++ L  V L YFR LK  +++T      LLPA LEGL + +HLVN+DTVVDL+  L+ELL     L L   L CVL A +TL GPGRE+Q+D+K ++  LY  L R+GT      +                         T +   C+ AAFIKR+E S  RVAA +K++   A+ +   PD  +  L+  ARQ+  RYP V QLL+   D + +G Y PD  DPE  NP + + WEL  L+
Sbjct:  263 EAARLVAKLVKEYRGALRPGVIRSFAKLPLRVHVDEAQAAKLAADANKKKRKKDRELAEI----------ESELKESSGTVDKIILARCQSETLQSVILTYFRVLKSTDSKT---RHDLLPAALEGLAKFSHLVNIDTVVDLLDVLKELLLIVDNLPLEASLNCVLTAFQTLEGPGREMQIDQKEYIAPLYSQLARVGTEENSKKN-------------------------TYILLRCLTAAFIKRREYSIVRVAAFVKQMFTVAMHS---PDYTSVPLIALARQILQRYPSVHQLLESESDVITSGTYKPDVADPEHSNPFSTSAWELACLK 554          
BLAST of mRNA_P-wetherbeei_contig9794.1.1 vs. uniprot
Match: A0A6V2Q248_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2Q248_9STRA)

HSP 1 Score: 185 bits (469), Expect = 9.220e-50
Identity = 134/341 (39.30%), Postives = 178/341 (52.20%), Query Frame = 1
Query:    1 QVVRAVAKFLRARRFCVHVEALRVLETLPLRVHEDEAGAVR--AKAKRMKRGRRRPTAEIPGLNGGDDGVEAALAESRAAADPIVRARAQADALHEVTLVYFRFLK-DAEARTAAASAR--------LLPAVLEGLGRVAHLVNLDTVVDLMAALRELLA--AGQLTLAGGLACVLVALRTLHGPGRELQVDEKAFLLHLYGLLGRLGTAAGGSGSGXXXXXXXXXRSGRIATLGGEAAGLTALACDCVEAAFIKRKELSAARVAATLKRLCAAAVRTSSAPDAARLLGAARQLALRYPVVRQLLDGGGDRVVAGAYNPDAEDPEAGNPLAATCWELGLLR 984
            +  + +AK ++ R   +  + LR   +LPLRVHEDEA A +  + A   KR +    AEI          E  + E  +  D I  ARAQ+D LH VTL YFR LK +A+A+   AS          LL   LEGL + AHL+N+DTVVDL+A LR LL   +  L +   L C+L A +TL GPGRE+Q+D+K ++  LY  L RL T    S                           T LA  C+  AF+KR+E S  RVAA  K++C  ++       AA LL  +RQL  RYP V+QLL+   D +  G+Y PD EDPE  NP A + WEL L +
Sbjct:  264 EATKLLAKMIKERPNRIRPDVLRTFLSLPLRVHEDEAQAAKLASVANAKKRKKDAEAAEI----------EDEMKEGESNVDKIALARAQSDTLHSVTLTYFRVLKSEADAKGGRASINPTTDTAVDLLSPALEGLAKFAHLINIDTVVDLLAVLRTLLKERSDTLPIDAALNCILTAFQTLQGPGREMQIDQKEYVTPLYRQLSRLCTDKNSSH--------------------------TELALKCLSLAFLKRREYSTVRVAAFFKQICTVSLHAPP-HTAAPLLAFSRQLVQRYPSVQQLLENEQDVITTGSYTPDVEDPEHSNPHATSAWELSLSK 567          
BLAST of mRNA_P-wetherbeei_contig9794.1.1 vs. uniprot
Match: A0A7S4ABC0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ABC0_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.000e-48
Identity = 127/331 (38.37%), Postives = 174/331 (52.57%), Query Frame = 1
Query:    1 QVVRAVAKFLRARRFCVHVEALRVLETLPLRVHEDEAGAVR--AKAKRMKRGRRRPTAEIPGLNGGDDGVEAALAESRAAADPIVRARAQADALHEVTLVYFRFLKDAEARTAAASARLLPAVLEGLGRVAHLVNLDTVVDLMAALRELLA-AGQLTLAGGLACVLVALRTLHGPGRELQVDEKAFLLHLYGLLGRLGTAAGGSGSGXXXXXXXXXRSGRIATLGGEAAGLTALACDCVEAAFIKRKELSAARVAATLKRLCAAAVRTSSAPDAARLLGAARQLALRYPVVRQLLDGGGDRVVAGAYNPDAEDPEAGNPLAATCWELGLLR 984
            +  R VAK ++  R  +    +R    LPLRVH DEA A +  A A + KR + R  A+I          E+ L E     D IV AR Q++ L  V L YFR L+  +++T      +LPA LEGL + +HL+N+DTVVDL+  L+ELL     L L   L CVL A +TL GPGRE+Q+D+K ++  LY  L R+GT                 ++ RI  L             C+ AAFIKR+E S  RVAA +K++   A+  S    +  L+  ARQ+  RYP V QLL+   D + +G Y PD  DPE  NP + + WEL  L+
Sbjct:  263 EAARLVAKLVKEYRGALRPGVVRSFAKLPLRVHVDEAQAAKLAADANKKKRKKDRELADI----------ESELREGSGEVDKIVLARCQSETLQSVILTYFRILRSTDSKT---RHDILPAALEGLAKFSHLINIDTVVDLLDVLKELLVIVDTLPLEASLNCVLTAFQTLEGPGREMQIDQKEYIAPLYSQLARVGTEENSK------------KNTRILLL-------------CLNAAFIKRREYSTVRVAAFVKQMFTVAMH-SPVYTSVPLIALARQILQRYPSVHQLLESESDVITSGTYTPDVADPEHSNPFSTSAWELSCLK 554          
BLAST of mRNA_P-wetherbeei_contig9794.1.1 vs. uniprot
Match: D7G845_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G845_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.450e-48
Identity = 137/338 (40.53%), Postives = 176/338 (52.07%), Query Frame = 1
Query:    1 QVVRAVAKFLRARRFCVHVEALRVLETLPLRVHEDEAGAVRAKAKRMKRGRRRPTAEIPGLNGGDDGVEAALAESRAAADPIVRARAQADALHEVTLVYFRFLKDAEARTAAASARLLPAVLEGLGRVAHLVNLDTVVDLMAALRELLAAGQ----LTLAGGLACVLVALRTLHGPGRELQVDEKAFLLHLYGLLGRLGTAAGGSGSGXXXXXXXXXRSGRIATLGGEAAGLTALACDCVEAAFIKRKELSAARVAATLKRLCAAAVRTSSAPDAARLLGA------ARQLALRYPVVRQLLDGGGDRVVAGAYNPDAEDPEAGNPLAATCWELGLLR 984
            ++ +AVAKF++ R++ V    L+ L  LPLRV EDE                R           +  VEA L E+ A+ D  VRA+ QADALHEV L YFR LK      A     L PAV+EGL +  HLVNLDTV DL+  L++LL   +    L L   L CVL A R L GPGRELQ DE AF+  LY  L  L     G  SG                   +     AL  DC++AA  KR+ELS ARVAA +KRL + +++ + + + A  LGA      A +L LRYP  +QLL+   DR  +G + PD  +PE  N L++  WEL LLR
Sbjct:  505 EIAKAVAKFIKERKYHVSEGTLKCLSALPLRVREDERXXXXXXXXXXXXXXXR-----------EGSVEAGLMEADASVDDDVRAKCQADALHEVMLTYFRVLKRRPPPPA-----LFPAVMEGLAKFVHLVNLDTVQDLLDLLKDLLTEEEGEEELPLEAALHCVLAAFRALQGPGRELQTDEAAFVSALYRRLPDLLRPENGDASGR------------------KTVLCVALVYDCLDAALGKRRELSTARVAAMIKRLLSISLQLTQSANPAWGLGAGGLLRGAHRLLLRYPAAQQLLENEQDRPGSGPFRPDLTNPEHANALSSAAWELSLLR 808          
BLAST of mRNA_P-wetherbeei_contig9794.1.1 vs. uniprot
Match: A0A1E7EU90_9STRA (NOC3p-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU90_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.060e-48
Identity = 127/331 (38.37%), Postives = 171/331 (51.66%), Query Frame = 1
Query:   10 RAVAKFLRARRFCVHVEALRVLETLPLRVHEDEAGAVRA--KAKRMKRGRRRPTAEIPGLNGGDDGVEAALAESRAAADPIVRARAQADALHEVTLVYFRFLKDAEARTAAASARLLPAVLEGLGRVAHLVNLDTVVDLMAALRELLA-AGQLTLAGGLACVLVALRTLHGPGRELQVDEKAFLLHLYGLLGRLGTAAGGSGSGXXXXXXXXXRSGRIATLGGEAAGLTALACDCVEAAFIKRKELSAARVAATLKRLCAAAVRT---SSAPDAARLLGAARQLALRYPVVRQLLDGGGDRVVAGAYNPDAEDPEAGNPLAATCWELGLLR 984
            R VAK ++  R  +    +R    LPLRVH DEA A +   +A   KR + +  AEI          EA L E     D I+ AR Q++ L  V L YFR LK  + +T      LLP  LEGL + +HL+N+DTVVDL+  L+ELL     L L   L CVL A +TL GPGRE+Q+D+K ++  LY  L R+G+                          G +  +T L   C+ AAFIKR+E S  RVAA LK+    A+     +S P    L+  ARQ+  RYP   QLL+   D + +G Y PD +DPE  NP + + WEL +L+
Sbjct:  276 RLVAKLVKEYRGALRPGVVRAFIHLPLRVHTDEAQAAKLAEQANAKKRKKDKELAEI----------EADLKEGSGTVDKIILARCQSETLQNVILTYFRILKSTDTKTRHG---LLPVALEGLAKFSHLINIDTVVDLLDVLKELLVEVDDLPLEASLNCVLTAFQTLEGPGREMQIDQKEYITPLYSQLARVGSE-------------------------GSSRKITELLLRCLTAAFIKRREYSTVRVAAFLKQTFTVAMHAPVYTSVP----LIALARQILQRYPSAHQLLESESDVITSGQYTPDVDDPEHSNPFSTSAWELAVLK 564          
BLAST of mRNA_P-wetherbeei_contig9794.1.1 vs. uniprot
Match: A0A7S2YSV4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSV4_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.940e-47
Identity = 123/328 (37.50%), Postives = 172/328 (52.44%), Query Frame = 1
Query:   10 RAVAKFLRARRFCVHVEALRVLETLPLRVHEDEAGAVR--AKAKRMKRGRRRPTAEIPGLNGGDDGVEAALAESRAAADPIVRARAQADALHEVTLVYFRFLKDAEARTAAASARLLPAVLEGLGRVAHLVNLDTVVDLMAALRELLA-AGQLTLAGGLACVLVALRTLHGPGRELQVDEKAFLLHLYGLLGRLGTAAGGSGSGXXXXXXXXXRSGRIATLGGEAAGLTALACDCVEAAFIKRKELSAARVAATLKRLCAAAVRTSSAPDAARLLGAARQLALRYPVVRQLLDGGGDRVVAGAYNPDAEDPEAGNPLAATCWELGLLR 984
            R V+K ++ R F +    L+   +LPLRVH DEA A +  +KA   KR + +  A I          EA + E  A  D I+ AR Q+D L  VTL YFR LK    +   A   +LP  L GL + AHL+N+DTV DL+A L++LL     L L   L C+L A +TL GPG+EL++D+K +++ LY  + R+ T                            +   T +   C+ AAF+K+KE S  RVAA +K++ +AA+ + S   A  LL   RQ+  RYP  +QLL+   D + +G Y PD  DPE  NP A + WEL  LR
Sbjct:   66 RQVSKMIQNRNFKIRPAVLKTFLSLPLRVHVDEAQAAKLASKANAKKRKKDKELASI----------EADMKEGEATVDKILLARNQSDMLQAVTLTYFRILKSDNLQ---AMEDVLPVALAGLAKFAHLINIDTVKDLLAVLKDLLKNVDLLPLDAALNCILTAFQTLQGPGQELKIDQKEYVVPLYSQIARITTKE-------------------------NSLKHTEILLKCLSAAFLKQKEFSNVRVAAFVKQILSAAIHSPSY-TAVPLLAFVRQMMQRYPSAQQLLENENDVITSGEYTPDVIDPEQSNPFATSGWELSTLR 354          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9794.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYK4_9STRA1.500e-6245.43CBF/Mak21 family-domain-containing protein n=1 Tax... [more]
A0A7S4K774_9STRA6.160e-6144.41Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2VZB6_9STRA4.670e-5639.94Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
W7U347_9STRA1.550e-5543.52Nucleolar complex protein 3 n=2 Tax=Monodopsidacea... [more]
A0A448ZJX8_9STRA5.080e-5039.04Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6V2Q248_9STRA9.220e-5039.30Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4ABC0_9STRA1.000e-4838.37Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
D7G845_ECTSI1.450e-4840.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1E7EU90_9STRA2.060e-4838.37NOC3p-domain-containing protein n=1 Tax=Fragilario... [more]
A0A7S2YSV4_9STRA3.940e-4737.50Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9794contigP-wetherbeei_contig9794:59..1042 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G845
PFAMsCBF,NOC3p
Model size984
Max annot lvl2759|Eukaryota
KEGG koko:K14834
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005656,GO:0005730,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006267,GO:0006270,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022402,GO:0022607,GO:0022613,GO:0030684,GO:0030687,GO:0030689,GO:0030691,GO:0031974,GO:0031981,GO:0032991,GO:0032993,GO:0033260,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0036387,GO:0036388,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044786,GO:0046483,GO:0065003,GO:0065004,GO:0070013,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:1901360,GO:1901576,GO:1902299,GO:1990904
Exons1
Evalue2.38e-49
EggNOG OGsCOG5117@1|root,KOG2153@2759|Eukaryota
Descriptionchromatin binding
Cds size984
COG categoryJU
BRITEko00000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187110.745744-CDS-P-wetherbeei_contig9794:58..10421683187110.745744-CDS-P-wetherbeei_contig9794:58..1042Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9794 59..1042 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9794.1.1prot_P-wetherbeei_contig9794.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9794 59..1042 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9794.1.1

>prot_P-wetherbeei_contig9794.1.1 ID=prot_P-wetherbeei_contig9794.1.1|Name=mRNA_P-wetherbeei_contig9794.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=328bp
QVVRAVAKFLRARRFCVHVEALRVLETLPLRVHEDEAGAVRAKAKRMKRG
RRRPTAEIPGLNGGDDGVEAALAESRAAADPIVRARAQADALHEVTLVYF
RFLKDAEARTAAASARLLPAVLEGLGRVAHLVNLDTVVDLMAALRELLAA
GQLTLAGGLACVLVALRTLHGPGRELQVDEKAFLLHLYGLLGRLGTAAGG
SGSGGGGRTGGGARSGRIATLGGEAAGLTALACDCVEAAFIKRKELSAAR
VAATLKRLCAAAVRTSSAPDAARLLGAARQLALRYPVVRQLLDGGGDRVV
AGAYNPDAEDPEAGNPLAATCWELGLLR
back to top

mRNA from alignment at P-wetherbeei_contig9794:59..1042+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9794.1.1 ID=mRNA_P-wetherbeei_contig9794.1.1|Name=mRNA_P-wetherbeei_contig9794.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=984bp|location=Sequence derived from alignment at P-wetherbeei_contig9794:59..1042+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGGTTCGTGCCGTGGCCAAATTCTTGCGCGCTCGTCGCTTCTGCGT CCACGTGGAGGCCCTGCGCGTCCTCGAGACGCTGCCCTTGCGCGTGCACG AGGATGAGGCTGGCGCCGTCCGCGCCAAGGCCAAGCGCATGAAGCGCGGC CGCCGCCGCCCTACCGCCGAGATTCCCGGACTCAATGGCGGCGACGACGG CGTGGAGGCGGCGCTGGCCGAGTCGCGGGCGGCGGCGGACCCTATCGTGC GCGCGCGGGCGCAGGCGGACGCGCTGCACGAGGTGACGCTGGTCTACTTT CGGTTCCTGAAGGACGCCGAGGCGCGGACTGCGGCGGCGTCGGCGCGGCT GCTGCCAGCGGTGCTGGAAGGGCTGGGGCGGGTGGCGCACCTGGTGAACC TCGATACGGTGGTGGACCTGATGGCGGCGCTTAGGGAGCTGCTGGCGGCC GGGCAGCTGACGCTGGCGGGCGGCCTCGCGTGCGTGCTGGTAGCGCTGCG AACGCTGCACGGACCCGGCCGGGAGCTGCAGGTCGACGAGAAGGCGTTCC TGCTGCATCTCTACGGCCTGCTAGGCCGCCTCGGCACCGCCGCTGGCGGC AGCGGCAGCGGCGGTGGTGGCAGGACCGGCGGCGGCGCCAGAAGCGGCAG AATCGCCACATTGGGCGGCGAGGCGGCGGGGCTGACGGCGCTGGCCTGCG ACTGCGTGGAGGCGGCCTTCATCAAGCGCAAGGAGCTCTCAGCGGCGCGT GTGGCGGCCACGCTGAAGCGGCTCTGCGCGGCGGCTGTCCGGACGTCGTC CGCCCCCGACGCCGCCCGGCTGCTCGGCGCCGCCCGTCAGCTGGCGCTGC GCTACCCGGTGGTCCGGCAGCTGCTGGACGGCGGCGGCGACCGCGTCGTC GCCGGCGCGTACAATCCGGATGCGGAGGACCCAGAGGCGGGCAACCCGCT GGCGGCGACCTGCTGGGAGCTGGGACTGCTGCGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig9794:59..1042+

>mRNA_P-wetherbeei_contig9794.1.1 ID=mRNA_P-wetherbeei_contig9794.1.1|Name=mRNA_P-wetherbeei_contig9794.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=984bp|location=Sequence derived from alignment at P-wetherbeei_contig9794:59..1042+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGGTTCGTGCCGTGGCCAAATTCTTGCGCGCTCGTCGCTTCTGCGT
CCACGTGGAGGCCCTGCGCGTCCTCGAGACGCTGCCCTTGCGCGTGCACG
AGGATGAGGCTGGCGCCGTCCGCGCCAAGGCCAAGCGCATGAAGCGCGGC
CGCCGCCGCCCTACCGCCGAGATTCCCGGACTCAATGGCGGCGACGACGG
CGTGGAGGCGGCGCTGGCCGAGTCGCGGGCGGCGGCGGACCCTATCGTGC
GCGCGCGGGCGCAGGCGGACGCGCTGCACGAGGTGACGCTGGTCTACTTT
CGGTTCCTGAAGGACGCCGAGGCGCGGACTGCGGCGGCGTCGGCGCGGCT
GCTGCCAGCGGTGCTGGAAGGGCTGGGGCGGGTGGCGCACCTGGTGAACC
TCGATACGGTGGTGGACCTGATGGCGGCGCTTAGGGAGCTGCTGGCGGCC
GGGCAGCTGACGCTGGCGGGCGGCCTCGCGTGCGTGCTGGTAGCGCTGCG
AACGCTGCACGGACCCGGCCGGGAGCTGCAGGTCGACGAGAAGGCGTTCC
TGCTGCATCTCTACGGCCTGCTAGGCCGCCTCGGCACCGCCGCTGGCGGC
AGCGGCAGCGGCGGTGGTGGCAGGACCGGCGGCGGCGCCAGAAGCGGCAG
AATCGCCACATTGGGCGGCGAGGCGGCGGGGCTGACGGCGCTGGCCTGCG
ACTGCGTGGAGGCGGCCTTCATCAAGCGCAAGGAGCTCTCAGCGGCGCGT
GTGGCGGCCACGCTGAAGCGGCTCTGCGCGGCGGCTGTCCGGACGTCGTC
CGCCCCCGACGCCGCCCGGCTGCTCGGCGCCGCCCGTCAGCTGGCGCTGC
GCTACCCGGTGGTCCGGCAGCTGCTGGACGGCGGCGGCGACCGCGTCGTC
GCCGGCGCGTACAATCCGGATGCGGAGGACCCAGAGGCGGGCAACCCGCT
GGCGGCGACCTGCTGGGAGCTGGGACTGCTGCGG
back to top