mRNA_P-wetherbeei_contig9789.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9789.1.1
Unique NamemRNA_P-wetherbeei_contig9789.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9789.1.1 vs. uniprot
Match: A0A7L5XUS3_9HYPH (Cytochrome c oxidase assembly protein CtaG n=1 Tax=Rhodoblastus sp. TaxID=1962975 RepID=A0A7L5XUS3_9HYPH)

HSP 1 Score: 515 bits (1326), Expect = 3.680e-176
Identity = 283/542 (52.21%), Postives = 343/542 (63.28%), Query Frame = 1
Query:    1 NKRTGVVLGGLAAGMLCLAYAAVPLYKMFCQATGYGGTTQRVAGPSDTILDRKITIRFDGNVNG-LAWRFEPVVTTLDVRIGESTLAFYRATNLTDKPLVGTATYNVTPDIAGSFFNKIACFCFTEQRLEPGESVDMPVSFYVDPTLVDDKDARRLNQITLSYTFYPVDRPAKAAEAKRRGDGQ----------GG*HPSERL----GIDGRAHDMADSH-AKPNHDYHLVDPSPWPALASLGAFLMAIGGIAWMRSMGTGGGLALPLVGTIKGPALFWVGMAWVSGVAFLWWRDVIREAHKGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDVSLFPSDLVGLPIHDGGTVTPSDKYMIGMESRAKLTGGHWPPSPVATTEMPTSGFFKGTFDPWGLPFINTVILLLSGTTVTWAHHALLKNDRRGLVWGLVCTVVLGMLFTACQAYEYIHAGFSYGGHIYGSTFFMATGFHGAHVIIGTIFLFVCLLRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFAVIYVYGA--GTPLAH 1572
            N R    + G  A ML L++AAVPLY +FC ATGYGGTTQ  A     +  R + +RFD NV G L  RFE  V  +D+R GE+   FY+ATNL+D+P+  TA YNVTPD AG +F KI+CFCFTEQ +  G+S+D+PV F++DP L  D+  + +  +TLSYT YPV  PA A+ AK +G GQ                E L    G + R   MAD+H AKPNHDYHLVDPSPWP LASL AF+ AIG I +M+ +  GG  A        G  +F  GM  +  VA  WW DVI+EA  G HT VV LH RYGMILFIASEVMFFVAWFWA+FDV+LFP++              + ++      R    GG WPP+ +                PWGLP +NT+ILL SGTTVTWAHHALL  DR GL  GL+ T++LG LFTA Q YEY HA F++   IYG+TF+MATGFHG HV +GT+FL VCL+RA  G  TPKQH GFE AAWYWHFVDVVWLFLF  +YV+G   G   AH
Sbjct:   17 NARVAFAVTGAVAAMLALSFAAVPLYALFCAATGYGGTTQVAAAAPGVVGARPMRVRFDANVRGGLPLRFEGEVAKIDIRPGETKTIFYKATNLSDRPVAATAAYNVTPDAAGGWFXKISCFCFTEQTIPAGQSIDLPVVFFLDPGLEKDETMKGVTDVTLSYTXYPVQTPA-ASSAKPQGGGQDESIVRRVATARRRTQEALTSAAGAE-RGWIMADAHHAKPNHDYHLVDPSPWPFLASLFAFIAAIGLIXYMKGIAIGGLKA--------GGLIFGAGMIALVYVAMSWWMDVIKEAEXGFHTRVV-LHHRYGMILFIASEVMFFVAWFWAFFDVALFPNE--------------AQQF-----ERTAAIGGKWPPANIHV------------LSPWGLPLVNTLILLTSGTTVTWAHHALLAGDRGGLXEGLLLTILLGALFTAVQIYEYAHAPFAFKESIYGATFYMATGFHGFHVFVGTVFLIVCLIRAAKGQMTPKQHLGFEFAAWYWHFVDVVWLFLFTCVYVWGGAGGLVAAH 516          
BLAST of mRNA_P-wetherbeei_contig9789.1.1 vs. uniprot
Match: A0A7C4TPU2_9HYPH (Cytochrome-c oxidase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TPU2_9HYPH)

HSP 1 Score: 479 bits (1233), Expect = 4.040e-165
Identity = 235/326 (72.09%), Postives = 258/326 (79.14%), Query Frame = 1
Query:  601 MADSHAKPNHDYHLVDPSPWPALASLGAFLMAIGGIAWMRSMGTGGGLALPLVGT-IKGPALFWVGMAWVSGVAFLWWRDVIREAHKGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDVSLFPSDLVGLPIH-DGGTVTPSDKYMIGMESRAKLTGGHWPPSPVATTEMPTSGFFKGTFDPWGLPFINTVILLLSGTTVTWAHHALLKNDRRGLVWGLVCTVVLGMLFTACQAYEYIHAGFSYGGHIYGSTFFMATGFHGAHVIIGTIFLFVCLLRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFAVIYVYGAGTPLAH 1572
            MA+SHAK +HDYHLVDPSPWP LA++GAFLMA+G I WMR+        L L G  I+GP +F +G A V  VAF WWRDVIREAH+GDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFD +LFP  L  LPI    GT  PS+   IG+  R  L GG WPP P           F+GTFDPWGLP INT+ILLLSGTTVTWAHH+LL+NDR+GLVWGLV TV LG++FT CQAYEY HA FSY GHIYG+TFFMATGFHGAHVIIGTIFL VCL RALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLF+ IYV+GAG P  H
Sbjct:    1 MAESHAK-HHDYHLVDPSPWPVLAAIGAFLMAVGAIGWMRTFPGDPASGLNLFGLLIRGPTVFAIGSAVVVAVAFFWWRDVIREAHRGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDAALFPGQLQNLPITLPDGTTEPSETT-IGLVDRNTLLGGQWPPKPAPG--------FEGTFDPWGLPLINTLILLLSGTTVTWAHHSLLQNDRKGLVWGLVATVFLGIMFTVCQAYEYGHAAFSYSGHIYGATFFMATGFHGAHVIIGTIFLTVCLFRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFSCIYVWGAGAPAVH 316          
BLAST of mRNA_P-wetherbeei_contig9789.1.1 vs. uniprot
Match: A0A6N6T3W9_9HYPH (Cytochrome-c oxidase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T3W9_9HYPH)

HSP 1 Score: 476 bits (1225), Expect = 5.320e-164
Identity = 228/324 (70.37%), Postives = 261/324 (80.56%), Query Frame = 1
Query:  601 MADSHAKPNHDYHLVDPSPWPALASLGAFLMAIGGIAWMRSMGTGGGLALPLVGTIKGPALFWVGMAWVSGVAFLWWRDVIREAHKGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDVSLFPSDLVGLPIHDGGTVTPSDKYMIGMESRAKLTGGHWPPSPVATTEMPTSGFFKGTFDPWGLPFINTVILLLSGTTVTWAHHALLKNDRRGLVWGLVCTVVLGMLFTACQAYEYIHAGFSYGGHIYGSTFFMATGFHGAHVIIGTIFLFVCLLRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFAVIYVYGAGTPLAH 1572
            MA++HAK +HDYHLV+PSPWP + +L AF++A+G I WMRS G G G+       +KGP++F++G+  V    F+WWRDVI+EAH GDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFD +LFP+ +  L I   G    + K +IGM  R KL GGHWPP P           F+GTFDPWGLP +NT+ILL SGTTVTWAHHALL NDRRGLVWGL+ TVVLG+LFTACQAYEY HAGF++ GH+YGSTFFMATGFHGAHVIIGT+FL VCLLRAL GHFTPKQHFGFEAAAWYWHFVDVVWLFLF  IYV+GAGTPLAH
Sbjct:    1 MAETHAK-HHDYHLVNPSPWPVVGALFAFVLAVGLIIWMRSGGGGDGVFY-----VKGPSVFFIGVLGVLFTMFMWWRDVIKEAHGGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDAALFPAAVHPLDITGPGGAVEAGKEIIGMVDRDKLFGGHWPPKPNEA--------FRGTFDPWGLPLVNTLILLTSGTTVTWAHHALLNNDRRGLVWGLLVTVVLGILFTACQAYEYAHAGFNFAGHMYGSTFFMATGFHGAHVIIGTLFLTVCLLRALKGHFTPKQHFGFEAAAWYWHFVDVVWLFLFMCIYVWGAGTPLAH 310          
BLAST of mRNA_P-wetherbeei_contig9789.1.1 vs. uniprot
Match: A0A2W4T400_9PROT (Cytochrome-c oxidase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4T400_9PROT)

HSP 1 Score: 472 bits (1214), Expect = 2.480e-162
Identity = 229/325 (70.46%), Postives = 260/325 (80.00%), Query Frame = 1
Query:  601 MADSHAKPNHDYHLVDPSPWPALASLGAFLMAIGGIAWMRSMGTGGGLALPLVGTIKGPALFWVGMAWVSGVAFLWWRDVIREAHKGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDVSLFPSDLVGLPIH-DGGTVTPSDKYMIGMESRAKLTGGHWPPSPVATTEMPTSGFFKGTFDPWGLPFINTVILLLSGTTVTWAHHALLKNDRRGLVWGLVCTVVLGMLFTACQAYEYIHAGFSYGGHIYGSTFFMATGFHGAHVIIGTIFLFVCLLRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFAVIYVYGAGTPLAH 1572
            MADSHAK +HDYHLVDPSPWP LA+L AF+MA+G I WM SMG G G     V  I+GP++F+VG A ++ +A+ WWRDV+REAH G HTPVVQLH RYGMILFI +EVMFF AWFWAYFD +LFP  +  LP+    GTV PSD  +IG+  R +LTGG WPP P        S  F+ TFDPWGLP +NT+ILLLSGTTVTWAHH+LL+NDR+GL+WGL  TV LG+ FT  QAYEY HA F+Y GHIYG+TFFMATGFHGAHVIIGTIFLFVCLLRAL GHFTPKQHFGFEAAAWYWHFVDVVWLFLFA IYV+GAGTP AH
Sbjct:    1 MADSHAK-HHDYHLVDPSPWPILAALSAFIMAVGFIIWMHSMGGGEG-----VFGIRGPSVFFVGAALLAAMAYFWWRDVVREAHSGHHTPVVQLHFRYGMILFITTEVMFFAAWFWAYFDAALFPGGVSPLPVTLPDGTVEPSDA-VIGLVQRNELTGGQWPPVP--------SDAFQSTFDPWGLPLVNTLILLLSGTTVTWAHHSLLENDRKGLIWGLALTVCLGVTFTLLQAYEYGHAAFNYSGHIYGATFFMATGFHGAHVIIGTIFLFVCLLRALKGHFTPKQHFGFEAAAWYWHFVDVVWLFLFACIYVWGAGTPAAH 310          
BLAST of mRNA_P-wetherbeei_contig9789.1.1 vs. uniprot
Match: A0A2W4N144_9PROT (Cytochrome-c oxidase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4N144_9PROT)

HSP 1 Score: 466 bits (1200), Expect = 3.290e-160
Identity = 230/325 (70.77%), Postives = 256/325 (78.77%), Query Frame = 1
Query:  601 MADSHAKPNHDYHLVDPSPWPALASLGAFLMAIGGIAWMRSMGTGGGLALPLVGTIKGPALFWVGMAWVSGVAFLWWRDVIREAHKGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDVSLFPSDLVGLPIH-DGGTVTPSDKYMIGMESRAKLTGGHWPPSPVATTEMPTSGFFKGTFDPWGLPFINTVILLLSGTTVTWAHHALLKNDRRGLVWGLVCTVVLGMLFTACQAYEYIHAGFSYGGHIYGSTFFMATGFHGAHVIIGTIFLFVCLLRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFAVIYVYGAGTPLAH 1572
            MADSHAK +HDYHLVDPSPWP LASL A +MAIG + WM SM  G     P V  I+G ++F++G   +  +AF WWRDV+REAH G HTPVVQLHLRYGMILFI +EVMFFVAWFWAYFD +LFP D+  LPI    GTV  SD+ +IGM  R +LTGG WPP P  T        FK TFDPWGLP +NT+ILLLSGTTVTWAHH+LL+NDR+GLVWGL  TV LG +FT  QAYEY HA F+Y GHIYG+TFFMATGFHGAHVIIGTIFL VCLLRAL GHFTPKQHFGFEAAAWYWHFVDVVWLFLFA IYV+GAGTP  H
Sbjct:    1 MADSHAK-HHDYHLVDPSPWPLLASLSALVMAIGFVIWMHSMNGG-----PGVFGIRGSSVFFIGAIALVAMAFFWWRDVVREAHSGHHTPVVQLHLRYGMILFITTEVMFFVAWFWAYFDAALFPGDVHPLPITLPDGTVEASDQ-VIGMVQRNELTGGQWPPVPSDT--------FKSTFDPWGLPLVNTLILLLSGTTVTWAHHSLLQNDRKGLVWGLTLTVALGAIFTMLQAYEYGHAAFNYAGHIYGATFFMATGFHGAHVIIGTIFLLVCLLRALKGHFTPKQHFGFEAAAWYWHFVDVVWLFLFACIYVWGAGTPAGH 310          
BLAST of mRNA_P-wetherbeei_contig9789.1.1 vs. uniprot
Match: A0A537S673_9PROT (Cytochrome-c oxidase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S673_9PROT)

HSP 1 Score: 466 bits (1199), Expect = 5.790e-160
Identity = 225/329 (68.39%), Postives = 259/329 (78.72%), Query Frame = 1
Query:  601 MADSHAKPNHDYHLVDPSPWPALASLGAFLMAIGGIAWMRSMGTGGGLALPLVGTIKGPALFWVGMAWVSGVAFLWWRDVIREAHKGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDVSLFPSDLVGLPIHDGGTVTP-----SDKYMIGMESRAKLTGGHWPPSPVATTEMPTSGFFKGTFDPWGLPFINTVILLLSGTTVTWAHHALLKNDRRGLVWGLVCTVVLGMLFTACQAYEYIHAGFSYGGHIYGSTFFMATGFHGAHVIIGTIFLFVCLLRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFAVIYVYGAGTPLAH 1572
            MAD+HAK +HDYHLV+PSPWPA+ +  AF+ A+G I WMRSMG   GL       ++G ++F VG+  +    F+WWRDVI+EAH GDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFD +L+P+      IH    VTP     + K ++GM  R ++ GGHWPP P    E  T+G+F GTFDPWGLP +NT+ILL SGTTVTWAHHALL+N+R+GLVWGLV TV+LG+LFT CQAYEYIHAGFSY GH YGSTFFMATGFHGAHVIIGT+FL VCL RALAG FTPKQHFGFEAAAWYWHFVDVVWLFLF  IYV+GAG P  H
Sbjct:    1 MADTHAK-HHDYHLVNPSPWPAVGATAAFITAVGLIIWMRSMGGAPGLF-----GLRGASVFLVGVLGLLFTVFMWWRDVIKEAHGGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDAALYPA-----AIHPIDVVTPDGAVEATKEVVGMVKRDEIFGGHWPPKPAEIAE--TNGYFHGTFDPWGLPLVNTLILLTSGTTVTWAHHALLENNRKGLVWGLVLTVILGILFTTCQAYEYIHAGFSYAGHTYGSTFFMATGFHGAHVIIGTLFLTVCLFRALAGDFTPKQHFGFEAAAWYWHFVDVVWLFLFMCIYVWGAGVPAPH 316          
BLAST of mRNA_P-wetherbeei_contig9789.1.1 vs. uniprot
Match: A0A431NV71_9HYPH (Cytochrome-c oxidase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A431NV71_9HYPH)

HSP 1 Score: 463 bits (1191), Expect = 7.350e-159
Identity = 223/324 (68.83%), Postives = 255/324 (78.70%), Query Frame = 1
Query:  601 MADSHAKPNHDYHLVDPSPWPALASLGAFLMAIGGIAWMRSMGTGGGLALPLVGTIKGPALFWVGMAWVSGVAFLWWRDVIREAHKGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDVSLFPSDLVGLPIHDGGTVTPSDKYMIGMESRAKLTGGHWPPSPVATTEMPTSGFFKGTFDPWGLPFINTVILLLSGTTVTWAHHALLKNDRRGLVWGLVCTVVLGMLFTACQAYEYIHAGFSYGGHIYGSTFFMATGFHGAHVIIGTIFLFVCLLRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFAVIYVYGAGTPLAH 1572
            MAD+HAK +HDYHLV+PSPWPAL S+ AF+ A+G I WMRS G G GL       +KGP LF++G+  +    F+WWRDVIREAH GDHTPVVQLHLRYGM+LFIASEVMFFVAWFWA+FD +LFP  +  L I + G V  + K +IGM  R  +TGG WPP P           F GTFDPWGLP +NT+ILL SGTTVTWAHHALL+NDR+GLVWGL  T+VLG +FTACQA+EY+HAGFS+GG++YG  FFMATGFHGAHVIIGTIFL VCL RALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLF  IYV+ AGTP  H
Sbjct:    1 MADTHAK-HHDYHLVNPSPWPALGSVSAFVWAVGLIVWMRSKGGGEGLF-----GLKGPTLFYIGIGLILLTMFMWWRDVIREAHAGDHTPVVQLHLRYGMLLFIASEVMFFVAWFWAFFDAALFPGAVHSLDITNNGVVE-AGKEVIGMVDRNTITGGKWPPIPNEA--------FHGTFDPWGLPLVNTLILLTSGTTVTWAHHALLENDRKGLVWGLTLTIVLGAIFTACQAFEYMHAGFSFGGNLYGGVFFMATGFHGAHVIIGTIFLTVCLFRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFLCIYVWFAGTPAPH 309          
BLAST of mRNA_P-wetherbeei_contig9789.1.1 vs. uniprot
Match: A0A7C2QVT9_9HYPH (Cytochrome-c oxidase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QVT9_9HYPH)

HSP 1 Score: 461 bits (1187), Expect = 2.310e-158
Identity = 224/324 (69.14%), Postives = 255/324 (78.70%), Query Frame = 1
Query:  601 MADSHAKPNHDYHLVDPSPWPALASLGAFLMAIGGIAWMRSMGTGGGLALPLVGTIKGPALFWVGMAWVSGVAFLWWRDVIREAHKGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDVSLFPSDLVGLPIHDGGTVTPSDKYMIGMESRAKLTGGHWPPSPVATTEMPTSGFFKGTFDPWGLPFINTVILLLSGTTVTWAHHALLKNDRRGLVWGLVCTVVLGMLFTACQAYEYIHAGFSYGGHIYGSTFFMATGFHGAHVIIGTIFLFVCLLRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFAVIYVYGAGTPLAH 1572
            MAD HAK +HDYHLV+PSPWPA+ +  AF+ A+G I WMRS+G G GL       + GP++F++G+  +    + WWRDVIREAH GDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFD +LFP+      +H    +T + K ++GM  R  LTGG WPP P        S  F GTFDPWGLP +NT+ILL SGTTVTWAHHALL+NDR+GLVWGLV T+VLG+LFTACQAYEY HAGF Y GHIYG+TFFMATGFHGAHVIIGT+FL VCL RALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLF  IYV+GAGTP  H
Sbjct:    1 MADLHAK-HHDYHLVNPSPWPAVGATAAFVTAVGLIIWMRSLGGGPGLF-----GLSGPSVFFIGVLGLIFTMYGWWRDVIREAHGGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDAALFPA-----AVHP---LTENGKEVVGMVERNALTGGQWPPKP--------SEAFTGTFDPWGLPLVNTLILLTSGTTVTWAHHALLENDRKGLVWGLVLTIVLGILFTACQAYEYAHAGFKYAGHIYGATFFMATGFHGAHVIIGTLFLTVCLFRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFMCIYVWGAGTPAPH 302          
BLAST of mRNA_P-wetherbeei_contig9789.1.1 vs. uniprot
Match: A0A2M9PFV4_9RHOB (Cytochrome c oxidase assembly protein CtaG n=1 Tax=Amaricoccus sp. HAR-UPW-R2A-40 TaxID=1985299 RepID=A0A2M9PFV4_9RHOB)

HSP 1 Score: 465 bits (1196), Expect = 5.220e-157
Identity = 249/536 (46.46%), Postives = 318/536 (59.33%), Query Frame = 1
Query:    1 NKRTGVVLGGLAAGMLCLAYAAVPLYKMFCQATGYGGTTQRVAGPSDTILDRKITIRFDGNVN-GLAWRFEPVVTTLDVRIGESTLAFYRATNLTDKPLVGTATYNVTPDIAGSFFNKIACFCFTEQRLEPGESVDMPVSFYVDPTLVDDKDARRLNQITLSYTFYPVD-RPAKAAEAKRRGDGQGG*HPSERLGID---------GRAHDMADSHAKPNHDYHLVDPSPWPALASLGAFLMAIGGIAWMRSMGTGGGLALPLVGTIKGPALFWVGMAWVSGVAFLWWRDVIREAHKGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDVSLFPSDLVGLPIHDGGTVTPSDKYMIGMESRAKLTGGHWPPSPVATTEMPTSGFFKGTFDPWGLPFINTVILLLSGTTVTWAHHALL-KNDRRGLVWGLVCTVVLGMLFTACQAYEYIHAGFSYGGHIYGSTFFMATGFHGAHVIIGTIFLFVCLLRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFAVIYVYGAGTPLAH 1572
            N R  + L  +A GM+ L++AAVP Y  FC+ TGYGGTT R   PS  + +  +TIRFD NV  G+   F PV  T+ +RIGE+ LAFY   NL+D+ + GTA++NVTP  AGS+F+KIACFCF  Q L PGE V MPV+F+VDP ++ D +A+ +  ITLSYT YP D  P + A A RR        P  R              R    A+   + NHDYH++ PS WP   ++GAF+M +G + +                   GP +  +G+  V    + WW DVI E+  GDHTPVVQ+ LRYG+I+FI SE+MFF AWFW++F  +L+P                    M  ++         WPP  + T            FDPW LP INT+ILL SG   TWAHHAL+ +NDRR + WGL   + LG+ FT  Q YEY HA F + G++YG+ FFMATGFHG HVIIGTIFL VCL+R  AG FT  +H GFEAAAWYWHFVDVVWLFLFA IY++G+G    H
Sbjct:    7 NTRHALGLALVAVGMVGLSFAAVPFYDWFCRTTGYGGTTTRAEAPSGPVGEELLTIRFDANVQPGMPVGFRPVERTMRLRIGETGLAFYEFENLSDERIAGTASFNVTPFSAGSYFDKIACFCFELQELAPGEKVQMPVTFFVDPEMLRDAEAKGVRNITLSYTMYPADPSPEREASAARR--------PPLRXXXXXXXXXXXXXSRTEREAEMAGRVNHDYHILPPSIWPFTGAVGAFVMLLGAVLFFHD---------------SGPWVMLMGLMLVLYTMYSWWADVISESQAGDHTPVVQIGLRYGVIMFIISEIMFFAAWFWSFFKNALYP--------------------MAAIDHT-------WPPPGIET------------FDPWHLPLINTLILLCSGCAATWAHHALVHENDRRQVKWGLSLAIGLGVFFTLVQIYEYSHATFGFSGNVYGANFFMATGFHGFHVIIGTIFLGVCLIRLQAGQFTQDKHVGFEAAAWYWHFVDVVWLFLFAAIYIWGSGGGAGH 480          
BLAST of mRNA_P-wetherbeei_contig9789.1.1 vs. uniprot
Match: A0A7Y4XG68_HYPSQ (Cytochrome-c oxidase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y4XG68_HYPSQ)

HSP 1 Score: 453 bits (1165), Expect = 8.250e-155
Identity = 227/323 (70.28%), Postives = 253/323 (78.33%), Query Frame = 1
Query:  601 MADSHAKPNHDYHLVDPSPWPALASLGAFLMAIGGIAWMRSMGTGGGLALPLVGTIKGPALFWVGMAWVSGVAFLWWRDVIREAHKGDHTPVVQLHLRYGMILFIASEVMFFVAWFWAYFDVSLFPSDLVGLPIHDGGTVTPSDKYMIGMESRAKLTGGHWPPSPVATTEMPTSGFFKGTFDPWGLPFINTVILLLSGTTVTWAHHALLKNDRRGLVWGLVCTVVLGMLFTACQAYEYIHAGFSYGGHIYGSTFFMATGFHGAHVIIGTIFLFVCLLRALAGHFTPKQHFGFEAAAWYWHFVDVVWLFLFAVIYVYGAGTPLA 1569
            MAD HAK NHDYHL+DPSPWP +ASL AF+ A+G IAWMR+   G G     V  IKGP +F +GM  +   A+LWWRDVI EA++GDHTPVVQLHLRYGMI+FIASEVMFFVAWFW YFD +LFPS +  L  + G         M+GM +R ++ GG WPP PV TT   TSGFFK TFDPWGLP INT+ILLLSG TVTWAHHALLKNDRRGLV GL+CTV+LG  FT  QA EY HAGFSY GH YGSTFFMATGFHGAHVIIGTIFL VCL+RA+ G FTP+QHFGFEAAAWYWHFVDVVWLFLFA IYV+GAG   A
Sbjct:    1 MADHHAK-NHDYHLLDPSPWPLVASLSAFVAALGAIAWMRTNIDGLG-----VFGIKGPYMFAIGMVALLATAWLWWRDVIIEANRGDHTPVVQLHLRYGMIMFIASEVMFFVAWFWGYFDSALFPSGVHELINNPG--------RMVGMTTRNEVYGGVWPPVPVDTTAAATSGFFKSTFDPWGLPLINTLILLLSGVTVTWAHHALLKNDRRGLVLGLLCTVLLGATFTYLQAVEYGHAGFSYAGHSYGSTFFMATGFHGAHVIIGTIFLLVCLIRAMRGAFTPEQHFGFEAAAWYWHFVDVVWLFLFAAIYVWGAGGGAA 309          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9789.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7L5XUS3_9HYPH3.680e-17652.21Cytochrome c oxidase assembly protein CtaG n=1 Tax... [more]
A0A7C4TPU2_9HYPH4.040e-16572.09Cytochrome-c oxidase n=1 Tax=Hyphomicrobiales bact... [more]
A0A6N6T3W9_9HYPH5.320e-16470.37Cytochrome-c oxidase n=1 Tax=Hyphomicrobiaceae bac... [more]
A0A2W4T400_9PROT2.480e-16270.46Cytochrome-c oxidase n=1 Tax=Proteobacteria bacter... [more]
A0A2W4N144_9PROT3.290e-16070.77Cytochrome-c oxidase n=1 Tax=Proteobacteria bacter... [more]
A0A537S673_9PROT5.790e-16068.39Cytochrome-c oxidase n=1 Tax=Alphaproteobacteria b... [more]
A0A431NV71_9HYPH7.350e-15968.83Cytochrome-c oxidase n=1 Tax=Hyphomicrobiales bact... [more]
A0A7C2QVT9_9HYPH2.310e-15869.14Cytochrome-c oxidase n=1 Tax=Hyphomicrobiales bact... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9789contigP-wetherbeei_contig9789:205..1779 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1267005.KB911255_gene2934
Preferred namectaE
PFAMsCOX3
Model size1575
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00016
KEGG koko:K02276
KEGG TC3.D.4.4,3.D.4.6
KEGG ReactionR00081
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00155
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
Exons1
Evalue7.57e-156
EggNOG OGsCOG1845@1|root,COG1845@2|Bacteria,1MUCK@1224|Proteobacteria,2TQWA@28211|Alphaproteobacteria,3N64R@45401|Hyphomicrobiaceae
EC1.9.3.1
DescriptionCytochrome c oxidase subunit III
Cds size975
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187110.2217422-CDS-P-wetherbeei_contig9789:204..11791683187110.2217422-CDS-P-wetherbeei_contig9789:204..1179Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9789 205..1179 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187110.2358453-UTR-P-wetherbeei_contig9789:1179..17791683187110.2358453-UTR-P-wetherbeei_contig9789:1179..1779Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig9789 1180..1779 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9789.1.1prot_P-wetherbeei_contig9789.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9789 205..1179 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9789.1.1

>prot_P-wetherbeei_contig9789.1.1 ID=prot_P-wetherbeei_contig9789.1.1|Name=mRNA_P-wetherbeei_contig9789.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=325bp
MADSHAKPNHDYHLVDPSPWPALASLGAFLMAIGGIAWMRSMGTGGGLAL
PLVGTIKGPALFWVGMAWVSGVAFLWWRDVIREAHKGDHTPVVQLHLRYG
MILFIASEVMFFVAWFWAYFDVSLFPSDLVGLPIHDGGTVTPSDKYMIGM
ESRAKLTGGHWPPSPVATTEMPTSGFFKGTFDPWGLPFINTVILLLSGTT
VTWAHHALLKNDRRGLVWGLVCTVVLGMLFTACQAYEYIHAGFSYGGHIY
GSTFFMATGFHGAHVIIGTIFLFVCLLRALAGHFTPKQHFGFEAAAWYWH
FVDVVWLFLFAVIYVYGAGTPLAH*
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mRNA from alignment at P-wetherbeei_contig9789:205..1779-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9789.1.1 ID=mRNA_P-wetherbeei_contig9789.1.1|Name=mRNA_P-wetherbeei_contig9789.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1575bp|location=Sequence derived from alignment at P-wetherbeei_contig9789:205..1779- (Phaeothamnion wetherbeei SAG_119_79)
AATAAACGGACGGGCGTCGTGCTGGGCGGGCTTGCAGCGGGCATGCTCTG CCTCGCCTACGCGGCCGTTCCGCTCTACAAGATGTTCTGTCAGGCGACGG GCTACGGGGGCACAACCCAGCGCGTGGCCGGTCCCTCCGACACGATCCTG GACCGCAAGATCACCATCCGCTTCGACGGCAATGTGAACGGACTTGCCTG GCGCTTCGAACCCGTCGTCACAACCCTCGATGTCCGCATCGGCGAGAGCA CGCTCGCATTTTACCGTGCGACAAACCTCACCGACAAGCCGCTGGTCGGG ACCGCGACGTACAACGTCACGCCCGACATCGCCGGCAGCTTCTTCAACAA GATCGCCTGCTTCTGCTTCACCGAGCAGCGGCTCGAGCCGGGCGAATCCG TCGATATGCCCGTCAGCTTCTATGTCGATCCCACTCTGGTCGACGACAAG GATGCGCGGCGGCTCAACCAGATAACGCTGTCCTACACGTTCTACCCCGT CGATCGGCCGGCCAAGGCGGCCGAGGCCAAGCGGCGCGGCGACGGGCAGG GCGGCTGACACCCATCGGAACGCTTAGGAATAGACGGGAGAGCGCACGAC ATGGCCGATAGCCACGCCAAACCCAACCACGACTATCACCTGGTCGATCC CAGCCCGTGGCCGGCGCTGGCATCGCTGGGCGCGTTCCTCATGGCGATCG GCGGTATCGCCTGGATGCGCTCGATGGGCACCGGGGGAGGCCTCGCCTTG CCCCTCGTCGGCACTATCAAGGGCCCGGCCCTGTTCTGGGTCGGCATGGC CTGGGTCAGCGGCGTTGCATTCCTGTGGTGGCGCGACGTTATCCGCGAGG CGCACAAGGGCGATCACACGCCTGTCGTACAGCTTCACCTGCGCTACGGC ATGATCCTTTTCATCGCTTCGGAAGTGATGTTCTTCGTCGCCTGGTTCTG GGCCTACTTCGACGTGTCGTTGTTCCCGTCCGATCTGGTTGGGCTGCCGA TCCATGACGGCGGTACGGTCACGCCTTCCGACAAGTACATGATCGGCATG GAAAGCCGCGCGAAGCTGACGGGCGGGCATTGGCCCCCGAGCCCCGTTGC TACGACGGAAATGCCGACGTCCGGTTTCTTCAAGGGCACGTTCGATCCTT GGGGGCTGCCGTTCATCAACACGGTCATCCTGCTGCTGTCGGGCACGACC GTCACGTGGGCGCACCACGCCCTCCTCAAGAACGATCGGCGCGGTCTTGT CTGGGGTCTCGTCTGCACCGTGGTGCTCGGAATGCTGTTCACGGCGTGCC AGGCCTACGAGTATATCCACGCCGGCTTCAGCTATGGCGGTCACATCTAC GGCTCGACGTTCTTCATGGCGACGGGCTTCCACGGCGCGCACGTCATTAT CGGCACGATATTCCTGTTCGTCTGCCTCTTGCGTGCGTTGGCGGGTCACT TCACGCCCAAGCAGCACTTCGGCTTCGAGGCCGCTGCCTGGTACTGGCAC TTCGTCGACGTGGTCTGGCTGTTCCTGTTCGCCGTGATCTACGTCTATGG CGCCGGGACGCCGCTGGCGCACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9789:205..1779-

>mRNA_P-wetherbeei_contig9789.1.1 ID=mRNA_P-wetherbeei_contig9789.1.1|Name=mRNA_P-wetherbeei_contig9789.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=975bp|location=Sequence derived from alignment at P-wetherbeei_contig9789:205..1779- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGATAGCCACGCCAAACCCAACCACGACTATCACCTGGTCGATCC
CAGCCCGTGGCCGGCGCTGGCATCGCTGGGCGCGTTCCTCATGGCGATCG
GCGGTATCGCCTGGATGCGCTCGATGGGCACCGGGGGAGGCCTCGCCTTG
CCCCTCGTCGGCACTATCAAGGGCCCGGCCCTGTTCTGGGTCGGCATGGC
CTGGGTCAGCGGCGTTGCATTCCTGTGGTGGCGCGACGTTATCCGCGAGG
CGCACAAGGGCGATCACACGCCTGTCGTACAGCTTCACCTGCGCTACGGC
ATGATCCTTTTCATCGCTTCGGAAGTGATGTTCTTCGTCGCCTGGTTCTG
GGCCTACTTCGACGTGTCGTTGTTCCCGTCCGATCTGGTTGGGCTGCCGA
TCCATGACGGCGGTACGGTCACGCCTTCCGACAAGTACATGATCGGCATG
GAAAGCCGCGCGAAGCTGACGGGCGGGCATTGGCCCCCGAGCCCCGTTGC
TACGACGGAAATGCCGACGTCCGGTTTCTTCAAGGGCACGTTCGATCCTT
GGGGGCTGCCGTTCATCAACACGGTCATCCTGCTGCTGTCGGGCACGACC
GTCACGTGGGCGCACCACGCCCTCCTCAAGAACGATCGGCGCGGTCTTGT
CTGGGGTCTCGTCTGCACCGTGGTGCTCGGAATGCTGTTCACGGCGTGCC
AGGCCTACGAGTATATCCACGCCGGCTTCAGCTATGGCGGTCACATCTAC
GGCTCGACGTTCTTCATGGCGACGGGCTTCCACGGCGCGCACGTCATTAT
CGGCACGATATTCCTGTTCGTCTGCCTCTTGCGTGCGTTGGCGGGTCACT
TCACGCCCAAGCAGCACTTCGGCTTCGAGGCCGCTGCCTGGTACTGGCAC
TTCGTCGACGTGGTCTGGCTGTTCCTGTTCGCCGTGATCTACGTCTATGG
CGCCGGGACGCCGCTGGCGCACTGA
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