mRNA_P-wetherbeei_contig9744.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9744.1.1 vs. uniprot
Match: D7FLL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL4_ECTSI) HSP 1 Score: 111 bits (277), Expect = 1.800e-25 Identity = 58/162 (35.80%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 1 DLLTCDGPCMRTYHLKCVKAEERPPEREDGAAPIAWLCADCEHGVHVCLLCNRPGKLNQPGDSGVFKCGVRSCGRFYHKKCAEVAELASAAAAA--------ACRFNCPLHYCKVCRKSAGEVGHRSSVCKCLRCPNGVHDQCLAHLKRYVRKGRMMVCDAH 462 D++TCDGPC+R++H+ C+ E D WLC DCE H C C G+ N G GVF+CGV SCGRFYH+ C E+ + + A +F C H C C +G G ++ + KC++CP H C+ RY ++C+AH Sbjct: 240 DMVTCDGPCLRSFHVVCLDLGE------DALKEEKWLCEDCERAEHECWQCGDYGQDNVVG--GVFRCGVPSCGRFYHRHCVELNKNSVVKADVDEGEDGQPIFKFRCAYHTCDTC--CSGRGGTKNHLYKCIKCPTAYHLNCIPPDARYHELA--LICEAH 389
BLAST of mRNA_P-wetherbeei_contig9744.1.1 vs. uniprot
Match: D3B878_POLPP (PHD zinc finger-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B878_POLPP) HSP 1 Score: 109 bits (272), Expect = 5.890e-25 Identity = 52/160 (32.50%), Postives = 76/160 (47.50%), Query Frame = 1 Query: 1 DLLTCDGPCMRTYHLKCVKAEERPPEREDGAAPIAWLCADCEHGVHVCLLCNRPGKLNQPGDSGVFKCGVRSCGRFYHKKCAEVAELASAAAAAACRFNCPLHYCKVCRKSAGEVGHRSSVCKCLRCPNGVHDQCLAHLKRYVRKGR------MMVCDAH 462 +LL CDGPC+R++H+ C+ + P R W C+DC ++C C G +N + KC V CG+FYH KC +L + RFNCPLHYC+ C G G C RCP H C+ + + + K + +++C H Sbjct: 79 NLLMCDGPCLRSFHIDCIGLDSMPTSR--------WECSDCSKNQNICFACKERGIINM----NLTKCKVHQCGKFYHNKCISEFKLTKVVNTKSPRFNCPLHYCESC----GVSGDGKQSVHCFRCPTAYHVICMPPVVKMLTKSKETRKTGLILCPKH 222
BLAST of mRNA_P-wetherbeei_contig9744.1.1 vs. uniprot
Match: A0A484E7L2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7L2_BRELC) HSP 1 Score: 103 bits (258), Expect = 6.520e-23 Identity = 54/168 (32.14%), Postives = 77/168 (45.83%), Query Frame = 1 Query: 1 DLLTCDGPCMRTYHLKCVKAEERPPEREDGAAPIAWLCADCEHGVHVCLLCNRPGKLNQPGDSGVFKCGVRSCGRFYHKKCAEVAELASAAAAAA--------------CRFNCPLHYCKVCRKSAGEVGHRSSVCKCLRCPNGVHDQCLAHLKRYVRKGRMMVCDAH 462 D++ CDG C+++YH C+ + P E WLC C +C C R G +N+ G GVF+CGV SCG+F+H+ C + L+ A + F CP H C VC + S + CL+CP H QC+ RY G ++C H Sbjct: 300 DMILCDGGCLKSYHFSCLGIDSAPGGEE-------WLCEQCRTNEQLCFACGRNGSINEKG--GVFRCGVASCGKFFHQTCIDANRLSRRAGGKSKPSLSTLEGLLESEAFFRCPRHICFVCEQKRKS----SDLMYCLKCPEAYHPQCVPPSARYNSVG--LLCWKH 452
BLAST of mRNA_P-wetherbeei_contig9744.1.1 vs. uniprot
Match: UPI000644EF62 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644EF62) HSP 1 Score: 102 bits (254), Expect = 1.810e-22 Identity = 52/160 (32.50%), Postives = 75/160 (46.88%), Query Frame = 1 Query: 1 DLLTCDGPCMRTYHLKCVKAEERPPEREDGAAPIAWLCADCEHGVHVCLLCNRPGKLNQPGDSGVFKCGVRSCGRFYHKKCAEVAELASAAAAAACRFNCPLHYCKVCRKSAGEVGHRSSVCKCLRCPNGVHDQCLAH------LKRYVRKGRMMVCDAH 462 +LL CDGPC+R++H+ C+ P + W C DC + ++C C + G + + KC V CG+FYH KC +LA + + RFNCPLHYC+ C G G C RCP H C+ + RK +++C H Sbjct: 110 ELLMCDGPCLRSFHVDCLGLGSTPAPNQ------RWECDDCLNQQNICFACKKRGIVGMD----LMKCKVHQCGKFYHHKCVGDFKLAKVVNSKSPRFNCPLHYCETC----GVSGDGKQSVHCFRCPTAYHVICMPPGVKMLTKSKETRKTGLILCPKH 255
BLAST of mRNA_P-wetherbeei_contig9744.1.1 vs. uniprot
Match: Y8158_DICDI (PHD finger-containing protein DDB_G0268158 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Y8158_DICDI) HSP 1 Score: 100 bits (250), Expect = 7.470e-22 Identity = 55/167 (32.93%), Postives = 73/167 (43.71%), Query Frame = 1 Query: 1 DLLTCDGPCMRTYHLKCVKAEERPPEREDGAAPIA-------WLCADCEHGVHVCLLCNRPGKLNQPGDSGVFKCGVRSCGRFYHKKCAEVAELASAAAAAACRFNCPLHYCKVCRKSAGEVGHRSSVCKCLRCPNGVHDQCLAH------LKRYVRKGRMMVCDAH 462 +LL CDG C+R++H+ C+KA +P+ W C DC + C C + G + + KC V CG+FYH KC +LA RFNCPLHYC VC S G C RCP H C+ R RK +++C H Sbjct: 147 ELLMCDGLCLRSFHISCLKARNLYNPSSSSISPVTTIDGTVRWECNDCVSSQNSCFSCKKRGIIG----IDLMKCKVHQCGKFYHYKCVADYKLAKLINTKTPRFNCPLHYCSVCEVS----GDGKQSVHCFRCPTAYHVICMQPGVKMLTKTRETRKTGLVLCPKH 305
BLAST of mRNA_P-wetherbeei_contig9744.1.1 vs. uniprot
Match: E1ZK22_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZK22_CHLVA) HSP 1 Score: 88.2 bits (217), Expect = 2.090e-17 Identity = 56/149 (37.58%), Postives = 69/149 (46.31%), Query Frame = 1 Query: 1 DLLTCDGPCMRTYHLKCVKAEER-------PPEREDGAAPIA----WLCADCEHGVHVCLLCNRPGKLNQPGDSGVFKCGVRSCGRFYHKKCAEVAELASAAAAAACRFNCPLHYCKVCRK--SAGEVGHRSSVCKCLRCPNGVHDQCL 408 +LL CDGPCMR++H V AE+ PP+ A +LC +C GVH C +C R GK + VFKC SCGR YH +CA A A F C LH C C + A G + C RCP H +CL Sbjct: 398 NLLACDGPCMRSFH---VSAEDDGCNLLCLPPDLAQTLTSAANSETFLCPNCLAGVHQCYVCKREGKAG----TEVFKCINASCGRHYHPECA--------GAEAGQPFVCKLHSCHACGQPGDASAPGQAGELVPCRRCPVAFHRRCL 531
BLAST of mRNA_P-wetherbeei_contig9744.1.1 vs. uniprot
Match: A0A0H5R7I3_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R7I3_9EUKA) HSP 1 Score: 87.0 bits (214), Expect = 3.460e-17 Identity = 50/158 (31.65%), Postives = 72/158 (45.57%), Query Frame = 1 Query: 1 DLLTCDGPCMRTYHLKCVKAEERPPEREDGAAPIAWLCADCEHGVHVCLLCNRPGKLNQPGDSGVFKCGVRSCGRFYHKKCAEVAELASAAAAAAC----RFNCPLHYCKVCRKSAGEVGHRSSVCKCLRCPNGVHDQCLAHLKRYVRKGRMMVCDAH 462 +LL CDGPC+R++H+ CV E P + W C+DC+ H C +C+ G VF+CG +CG F+H C EL + F CP H C C++ A H + + +C RC + H CL + R +VC H Sbjct: 194 NLLCCDGPCLRSFHISCVGLPEFPSDER-------WFCSDCQMKSHQCAVCSERGT----DFVDVFQCGHVACGLFFHLGCVNPHELTKKKSKTRGTNRGNFICPHHSCTKCKQPA----HSALLLQCNRCVDSYHIDCLVSGSICIN-ARSIVCPKH 335
BLAST of mRNA_P-wetherbeei_contig9744.1.1 vs. uniprot
Match: A0A2P6U412_CHLSO (ENHANCED DOWNY MILDEW 2-like isoform X1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U412_CHLSO) HSP 1 Score: 84.7 bits (208), Expect = 3.630e-16 Identity = 49/141 (34.75%), Postives = 66/141 (46.81%), Query Frame = 1 Query: 1 DLLTCDGPCMRTYHLKCVKAEERPPEREDGAAPIA-----WLCADCEHGVHVCLLCNRPGKLNQPGDSGVFKCGVRSCGRFYHKKCAEVAELASAAAAAACRFNCPLHYCKVCRKSAGEVGHRSSVCKCLRCPNGVHDQCL 408 +LL CDGPCMR++H+ +D A +A + C +C GV C +C + G+ N+ VFKC SCGR YH +CA+V F C LH CK C + A + C RCP H +CL Sbjct: 211 NLLACDGPCMRSFHVGTGTECNLLGLPKDLAELLATTSDTFRCPNCLAGVQQCFVCKKEGEENKD----VFKCIHASCGRHYHPRCADVEPGRP--------FACKLHACKACGQPAERGSKEGELVPCRRCPQAWHRRCL 339
BLAST of mRNA_P-wetherbeei_contig9744.1.1 vs. uniprot
Match: A0A1A7WSJ4_9TELE (Nuclear receptor binding SET domain protein 1a n=1 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7WSJ4_9TELE) HSP 1 Score: 84.7 bits (208), Expect = 3.650e-16 Identity = 47/144 (32.64%), Postives = 66/144 (45.83%), Query Frame = 1 Query: 1 DLLTCDGPCMRTYHLKCVKAEERPPEREDGAAPIAWLCADCEHGVHVCLLCNRPGKLNQPGDSGVFKCGVRSCGRFYHKKCAEV---AELASAAAAAACRFNCPLHYCKVCR--KSAGEVGHRSSVCKCLRCPNGVH--DQCLA 411 DLL CDG C +HL+C+ P R +LC DC+ GVH+C +C + G SGV +C + CG+FYH C +L + F CP+H C C + + +C+RCP H D C+A Sbjct: 1266 DLLVCDGHCFGAFHLQCIGLSAAPRGR--------FLCRDCKTGVHLCYVCKKSG-------SGVKRCIIPLCGKFYHTDCITAYSPTQLHNKG------FRCPMHVCLSCHIANPLNICSTKGRLARCVRCPVAYHANDNCMA 1388
BLAST of mRNA_P-wetherbeei_contig9744.1.1 vs. uniprot
Match: UPI001CD8B268 (histone-lysine N-methyltransferase, H3 lysine-36 specific n=1 Tax=Solea senegalensis TaxID=28829 RepID=UPI001CD8B268) HSP 1 Score: 83.6 bits (205), Expect = 9.240e-16 Identity = 48/142 (33.80%), Postives = 67/142 (47.18%), Query Frame = 1 Query: 1 DLLTCDGPCMRTYHLKCVKAEERPPEREDGAAPIAWLCADCEHGVHVCLLCNRPGKLNQPGDSGVFKCGVRSCGRFYHKKCAEVAELASAAAAAACR-FNCPLHYCKVCR--KSAGEVGHRSSVCKCLRCPNGVH--DQCLA 411 DLL CDG C +HL+C+ P + +LC +C+ GVH C +CN+ G SGV +C + CG+FYH C LA +A + CPLH C C + + +C+RCP H D C+A Sbjct: 1284 DLLVCDGHCYGAFHLQCIGLSVAPRGK--------FLCHECKTGVHTCFVCNKSG-------SGVKRCIIPLCGKFYHSDCI----LAYSATQPHNKGLRCPLHVCLSCHITNPLNVCSTKGRLARCVRCPVAYHTNDNCMA 1406 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9744.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9744.1.1 >prot_P-wetherbeei_contig9744.1.1 ID=prot_P-wetherbeei_contig9744.1.1|Name=mRNA_P-wetherbeei_contig9744.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp MRTYHLKCVKAEERPPEREDGAAPIAWLCADCEHGVHVCLLCNRPGKLNQback to top mRNA from alignment at P-wetherbeei_contig9744:1050..2028+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9744.1.1 ID=mRNA_P-wetherbeei_contig9744.1.1|Name=mRNA_P-wetherbeei_contig9744.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=979bp|location=Sequence derived from alignment at P-wetherbeei_contig9744:1050..2028+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9744:1050..2028+ >mRNA_P-wetherbeei_contig9744.1.1 ID=mRNA_P-wetherbeei_contig9744.1.1|Name=mRNA_P-wetherbeei_contig9744.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig9744:1050..2028+ (Phaeothamnion wetherbeei SAG_119_79)back to top |