mRNA_P-wetherbeei_contig9726.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9726.1.2
Unique NamemRNA_P-wetherbeei_contig9726.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: D8LIB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB0_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 2.160e-49
Identity = 103/213 (48.36%), Postives = 134/213 (62.91%), Query Frame = 1
Query:   28 VAVACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDALLVPG---TGLGTRGMPLALLALSALCKAAGLRAFATDFPFVCVGSYVGWAYLRF-VHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKLNS 654
            V +  G +TS GIF  YI+TR E+LL +E+HG  GVL ALAVA A++   A L+P        TR +PL L+  SA+C+A  +   A DFPFV VG+Y  W YLRF  H+      GD++ DF+LVNF P P R +VKPMCDF +GV  LLG F+ RA R         G+ G+  L    + T  A +DP+AERRRARAM+LL++KFA LN+
Sbjct:  101 VGLVSGFVTSCGIFMGYIVTRQEYLLDLELHGSFGVLAALAVAAAQQDASATLLPAGRAPWFPTRYLPLLLVTASAMCRALSVPVVAKDFPFVVVGAYASWVYLRFFAHLVLGAPSGDVTEDFQLVNFFPLPCRRVVKPMCDFTYGVFLLLGCFKGRAARLPV--SVVDGQGGVDPLVVATLPTP-ARKDPIAERRRARAMKLLDEKFATLNA 310          
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A836CJN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN9_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.190e-46
Identity = 104/230 (45.22%), Postives = 134/230 (58.26%), Query Frame = 1
Query:   25 VVAVACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLP-DALLVPGT--GLGTRGMPLALLALSALCKAAGLRAFATDFPFVCVGSYVGWAYLRFVHVYPD--------------GMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRAR---RQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKLNS 654
            +V VACGVITS  IF LY++TR E+LLS+EVHG  G++CALAVA A  LP + L  P    G   R +P+  + LS +   AGLRA +TDFPFVCVGSY GW YLRF H +P                + GD+S  F L  FLP   R  ++P+ DF +GV  LLGLF+ RA      +  + +                     RDPVAERRRARAM+LL++KFA+L++
Sbjct:   96 IVCVACGVITSCAIFALYVVTRDEYLLSLEVHGAWGLVCALAVAFAHALPLEPLFAPPALRGFKVRHLPVTAITLSGILYGAGLRAMSTDFPFVCVGSYAGWVYLRFFHTFPPVAAATLPPGAAPTATIPGDVSDAFALAMFLPPFTRRWLRPLADFVYGVALLLGLFRARAEYAAHARLLRASXXXXXXXXXXXXXXXXXXXRARDPVAERRRARAMKLLDEKFAQLSA 325          
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A7S2SH00_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH00_9STRA)

HSP 1 Score: 122 bits (306), Expect = 5.880e-30
Identity = 80/204 (39.22%), Postives = 109/204 (53.43%), Query Frame = 1
Query:   25 VVAVACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDALLVPG-TGLGTRGMPLALLALSALCKAAGLRAFATDFPFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPR--DPVAERRRARAMQLL 627
            VV + CGV+TS  +F LY++TRFE  L +   GF G++ ALAVA+    P    +P  + L    +P  L  LSA+    G +  A D PFV  G+Y  W YLRFV+ + DG  G +  DF LV   P P+R  ++P+ DF  GV  LLG F+DR    +   +      GL L           P+  DPV ERRRA+A ++L
Sbjct:  100 VVNIMCGVVTSTALFVLYVITRFEDYLFMPTFGFGGIMGALAVALKCFSPKEAPIPAMSALRYEHLPPLLAILSAMGWVVGWQLIARDTPFVLTGTYASWWYLRFVYRHADGSVGSVDEDFALVTLFPPPMRRYLEPVSDFCHGVCLLLGYFKDRKSPPKPAPEDQGPALGLELR----------PKIVDPVKERRRAKAAEML 293          
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A7S2CKW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKW4_9STRA)

HSP 1 Score: 114 bits (285), Expect = 9.190e-27
Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 1
Query:   43 GVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDALLVPGT-GLGTRGMPLALLALSALCKAAGLRAFATDFPFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFA 642
            G++TS  +F L+++TR E +L ++ +GF G++ ALAV +    P    +P    L    +P+ L  +S  C    + AFA D PFV +G Y  W YLRFVH   DG+ G++S DF  +   P   R  + P  +F +GV  LLG F++R R   A   +      +P     Q+       DPVAERRRA+A + L+ K A
Sbjct:  132 GLVTSVALFSLFVVTRMETVLFMQTYGFGGLIGALAVGLKLIAPRETPLPTVPSLKCHHLPMLLGIVSLFCWTLNITAFAKDTPFVVIGIYASWWYLRFVHKGRDGLVGNVSEDFAFITLFPPACRRYLSPFAEFTYGVACLLGYFKER-RPALAGMPSTEETPLVPASLLPQVH------DPVAERRRAKAREQLDAKLA 325          
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A0P1ASK3_PLAHL (Predicted membrane protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASK3_PLAHL)

HSP 1 Score: 103 bits (256), Expect = 7.510e-23
Identity = 75/214 (35.05%), Postives = 102/214 (47.66%), Query Frame = 1
Query:   37 ACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDALLVPGTGLGTRGMPLALLALSALCKAAGLRAFATD----------FPFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKL 648
            A  V+T   +F LYI+ R    L +   GF G + AL VA  +  P A      G+  R  PL +      C   GL AFA +           PF C+G Y GW YLRF++   D   GD+S +F LV   P    P++ P+  F F V  L G F+ RA ++            LP+L        +   DP+AERR+ARAM+ L++K AKL
Sbjct:   84 ATAVVTFVSLFVLYIIFRNPSYLEMSFSGFTGGITALLVAYMKPYPFATAPSFPGISLRFYPLVVCLSFCFCTMVGL-AFAANPSVRSMLTSAGPFSCMGGYFGWYYLRFLNKNRDRTIGDVSDEFALVVLFPDFCAPLIGPVAGFCFSVAKLCGFFKKRAMQKPKM---------LPIL-------TEIKNDPIAERRKARAMKALDEKLAKL 280          
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: M4BRC3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRC3_HYAAE)

HSP 1 Score: 102 bits (254), Expect = 1.780e-22
Identity = 75/215 (34.88%), Postives = 104/215 (48.37%), Query Frame = 1
Query:   37 ACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLP--DALLVPGTGLGTRGMPLALLALSALCKAAGLRAFATDF---------PFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKL 648
            A  ++    +F LY++ R    L     GF G + AL VA  +  P   A L PG  L  R  PL    + +LC  AG+   A            PF  +G Y GW YLRF++   D   GD+S +F LV  LP    P+V P+ +F F V+ L G F+ RA ++            LP+L        +   DP+AERR+ARAM+ L++K AKL
Sbjct:   96 AAAIVLFVNLFMLYVVFRDPIYLEKSFSGFTGGITALLVAFMKPTPLATASLFPGVPL--RCYPLIACVVFSLCTLAGMMFTAVPAVSSILVSAGPFSVLGGYFGWYYLRFLNKNRDRTVGDVSNEFALVILLPDVCTPLVSPLANFCFNVVKLCGFFKKRAAQKPKM---------LPIL-------TEIKNDPIAERRKARAMRALDEKLAKL 292          
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A833T097_PHYIN (Eukaryotic integral membrane protein (DUF1751) n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T097_PHYIN)

HSP 1 Score: 100 bits (249), Expect = 9.360e-22
Identity = 75/215 (34.88%), Postives = 103/215 (47.91%), Query Frame = 1
Query:   37 ACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDAL--LVPGTGLGTRGMPLALLALSALCKAAGLRAFATDF---------PFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKL 648
            A  V+    +F LYI+ R    L     GF G + AL VA  +  P A   L+PG  L  R  PL       LC   G+   A            PF  +G Y GW YLRF++   D   GD+S +F L+  LP    P+V+P+ +F F V+ L G F+ RA ++            LP+L        +   DP+AERR+ARAM+ L++K AKL
Sbjct:   96 AAAVVIFVNLFVLYIIFRNPIYLEASFSGFTGGMSALLVAYMKPTPFATAPLLPGVQL--RFYPLVACVTFCLCTMTGMVFTAIPALKLMLVGSGPFSVLGGYFGWYYLRFLNKNRDHTVGDVSDEFALIALLPDFFTPLVRPLANFCFSVVKLCGFFKKRATQKPKM---------LPIL-------TEIKNDPIAERRKARAMKALDEKLAKL 292          
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A485KCW3_9STRA (Aste57867_5077 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCW3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.700e-20
Identity = 79/209 (37.80%), Postives = 102/209 (48.80%), Query Frame = 1
Query:   49 ITSAGIFF-----LYILTRFEFLLSVEVHGFLGVLCALAVAVARRLP-DALLVPGTGLGTRGMPLALLALSALCKAAGLRA---FATDFPFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKL 648
            + S G+ F     LYI+ R  F L   V GF G L A+ VA+A+  P   L+VP        + + L+ L+    A   RA        P+   G Y GW YLRF+    DG  GD S  F L    P  +R  ++P+CD  F V  L GLF +R        DAA+  A LP        TV    DPVAERR+ARAM+ L++K AKL
Sbjct:   99 VVSTGLLFCDMFCLYIIFRNPFFLRTGVSGFTGGLVAMLVALAKENPMQTLVVPKLSCRYYPLIVTLVCLTLSFLAVFTRAEILIVGAGPYALSGFYFGWFYLRFLAKNADGSVGDTSDAFSLAVLFPPFLRTTIQPICDLVFNVARLCGLFSNR--------DAAAA-ASLP--------TVAVASDPVAERRKARAMKALDEKLAKL 290          
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A6A3NWD0_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NWD0_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.860e-20
Identity = 73/213 (34.27%), Postives = 100/213 (46.95%), Query Frame = 1
Query:   43 GVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDAL--LVPGTGLGTRGMPLALLALSALCKAAGLRAFATDF---------PFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKL 648
             V+    +F LY++ R    L     GF G + AL VA  +  P A   L PG  L  R  PL    +   C   G+   A            PF  +G Y GW YLRF++   D   GD+S +F LV  LP    P+V P+ +F F V+ L G F+ RA ++            LP+L        +   DP+AERR+ARAM+ L++K AKL
Sbjct:   98 AVVLFVNLFVLYVIFRNPIYLEASFSGFTGGITALLVAFMKPAPFATAPLFPGAPL--RFYPLVASVIFTFCTMVGMTFSAVSSISLMMLSAGPFSVLGGYFGWYYLRFLNKNRDQTVGDVSDEFALVVLLPDFCTPLVGPLANFCFSVVKLCGFFKKRAAQKPKM---------LPIL-------TEIKNDPIAERRKARAMKALDEKLAKL 292          
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A3F2RU99_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RU99_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 4.920e-20
Identity = 69/213 (32.39%), Postives = 102/213 (47.89%), Query Frame = 1
Query:   37 ACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDALLVPGTGLGTRGMPLALLALSALCKAAGLRAFA---------TDFPFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKL 648
            A  ++    +F LYI+ R    L     GF G + AL VA  +  P A      G+  R  PL    + + C   GL   A         +  PF  +G + GW YLRF++   D   GD+S +F L+  LP   +P++ P+ +F F V+ L G F+ RA ++            LP+L        +   DP+AERR+ARAM+ L++K AKL
Sbjct:   96 AAALVLFVNLFVLYIVFRDPIYLEANFSGFTGGITALLVAYMKPTPYAAAPLFPGVQLRYYPLVASGVFSFCSIFGLAFSAGPAVSIMLVSAGPFSVLGGFFGWYYLRFLNKNRDQTVGDVSDEFALIVLLPDFSKPVIGPLANFCFSVVKLCGFFKKRAAQKPKM---------LPIL-------TEIKNDPIAERRKARAMKALDEKLAKL 292          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIB0_ECTSI2.160e-4948.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJN9_9STRA2.190e-4645.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SH00_9STRA5.880e-3039.22Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A7S2CKW4_9STRA9.190e-2736.32Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A0P1ASK3_PLAHL7.510e-2335.05Predicted membrane protein n=1 Tax=Plasmopara hals... [more]
M4BRC3_HYAAE1.780e-2234.88Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A833T097_PHYIN9.360e-2234.88Eukaryotic integral membrane protein (DUF1751) n=2... [more]
A0A485KCW3_9STRA1.700e-2037.80Aste57867_5077 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6A3NWD0_9STRA1.860e-2034.27Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A3F2RU99_9STRA4.920e-2032.39Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9726contigP-wetherbeei_contig9726:66..1571 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LIB0
Preferred nameTMEM115
PFAMsDUF1751
Model size654
Max annot lvl2759|Eukaryota
KEGG koko:K04859
KEGG TC8.A.18.2
KEGG Pathwayko04010,ko04260,ko04261,ko04921,ko05410,ko05412,ko05414,map04010,map04260,map04261,map04921,map05410,map05412,map05414
Hectar predicted targeting categorysignal peptide
GOsGO:0000139,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005795,GO:0005798,GO:0006464,GO:0006486,GO:0006807,GO:0006810,GO:0006888,GO:0006890,GO:0008150,GO:0008152,GO:0008285,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0016020,GO:0016192,GO:0019538,GO:0030135,GO:0030137,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0031985,GO:0032580,GO:0034645,GO:0036211,GO:0042127,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0065007,GO:0070085,GO:0071704,GO:0097708,GO:0098588,GO:0098791,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
Exons4
Evalue6.53e-50
EggNOG OGsKOG2890@1|root,KOG2890@2759|Eukaryota
Ec32 ortholog descriptionProtein of unknown function DUF1751, integral membrane, eukaryotic
Ec32 orthologEc-24_001460.1
Descriptionretrograde vesicle-mediated transport, Golgi to ER
Cds size648
COG categoryS
BRITEko00000,ko00001,ko04040
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187107.2020586-UTR-P-wetherbeei_contig9726:65..711683187107.2020586-UTR-P-wetherbeei_contig9726:65..71Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig9726 66..71 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187107.216085-CDS-P-wetherbeei_contig9726:71..1761683187107.216085-CDS-P-wetherbeei_contig9726:71..176Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9726 72..176 +
1683187107.227431-CDS-P-wetherbeei_contig9726:469..7021683187107.227431-CDS-P-wetherbeei_contig9726:469..702Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9726 470..702 +
1683187107.2386734-CDS-P-wetherbeei_contig9726:1043..12631683187107.2386734-CDS-P-wetherbeei_contig9726:1043..1263Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9726 1044..1263 +
1683187107.2646768-CDS-P-wetherbeei_contig9726:1481..15711683187107.2646768-CDS-P-wetherbeei_contig9726:1481..1571Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9726 1482..1571 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9726.1.2prot_P-wetherbeei_contig9726.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9726 72..1571 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9726.1.2

>prot_P-wetherbeei_contig9726.1.2 ID=prot_P-wetherbeei_contig9726.1.2|Name=mRNA_P-wetherbeei_contig9726.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp
MLMLVVVVAVACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVA
VARRLPDALLVPGTGLGTRGMPLALLALSALCKAAGLRAFATDFPFVCVG
SYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGV
LGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRR
ARAMQLLNDKFAKLNS
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mRNA from alignment at P-wetherbeei_contig9726:66..1571+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9726.1.2 ID=mRNA_P-wetherbeei_contig9726.1.2|Name=mRNA_P-wetherbeei_contig9726.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1506bp|location=Sequence derived from alignment at P-wetherbeei_contig9726:66..1571+ (Phaeothamnion wetherbeei SAG_119_79)
CTCGGGATGCTCATGCTTGTGGTGGTTGTGGCGGTGGCGTGCGGCGTCAT CACCTCTGCTGGCATATTCTTCCTCTACATCCTGACGCGCTTTGAGTTCC TCCTGTCGGTGGTGAGCGCGCTGGCTGACAGCATGCTGTCCCGCGAGATT GCCTGCATGTGTGCCTGTTCGTCTTTTCTGTTGTTGGATTTGCTTCTGTA AAAAGCGCTGGGAAAGGGATTCCCCCTTTCTGTTGTGGATGGGCTGTACC TTTGAGGTTGGTGCTGCCGTCTGTTTACACCCTTTTATCTCAACGTTCCG ACCTCGAATGATGGCAGGCATGAGGCAATCGATCCCGTAGCCAGTCTGGG TTCCAGAGCACACCGACACGGAAAACCCATCCTTCCTTTCCCTTTTCCAC ATAGGAGGTTCACGGGTTCCTTGGCGTCCTCTGCGCCCTGGCGGTCGCCG TCGCTCGCCGCCTCCCGGACGCGCTGCTGGTGCCCGGCACCGGCCTTGGA ACTCGTGGCATGCCGCTGGCGCTGCTCGCGCTGTCAGCGCTCTGCAAGGC GGCCGGGCTGCGGGCGTTCGCGACGGACTTCCCCTTCGTCTGCGTCGGGT CGTACGTTGGGTGGGCCTACCTGCGCTTTGTGCACGTGTGAGTATCTTAC ATCTTTTCTTTTCTTTTCTTGTCCTTGTTCTTCGTCGTTTCCCTTTTATT TACACGTGCACATCGCGCTTCCCGCCTGTCGCATGCGTCAAAACGCTTTG TGCGTAGGGAAACCGGCTTCTTTCCCATTTGCTGCCTTGCTGGATCACGT TTTCCTCTTAGAGGTGCTGCATGTCTGCCTCACATAAACTCGTGCCGGAA AGAATGCGCCGCCGAAATTGTGTGGCGCCTCAGCCAGCCATGGATCCTAT GCCATTTTGCGGGTTTATCGACACATAATGTCTGACCAGAACCATTTTGT TGTATTACCCCACCACACCCGAGAACAGGTACCCGGACGGGATGCAAGGC GACATTTCGACGGACTTCGAGCTTGTCAACTTCCTGCCGGCGCCGGTGCG GCCCATGGTCAAGCCCATGTGCGACTTTGCCTTCGGCGTGTTGGGGCTGC TCGGACTCTTTCAGGATCGCGCGCGGCGGCAGCAGGCGCAGCAGGACGCC GCGTCGGGGAAGGCGGGGCTTCCGCTGCTCGCACAGCACCAAATAGAGGC GAGCGCGTGGTTTGGGTCGTGATTAGGAAGTTTTTGCTTGACGACCTTTG GCTGCTTTCGGCAACTGAGGAATTTCGAGAGCGTCCTGGCCTGTTTTCGA TATGAGAACACGTTTCTTCAACAGCTGTACATCTATTGTTGGTTGTGAGA TGCGTTCGGTTGTGAATAGGGTTCTAAATTCTGGCTTCTCTCTCTCGGTT GTTCCACTTACGGCAGACGGTGCAGGCACCGCGAGATCCAGTGGCGGAGC GACGGCGGGCGCGGGCGATGCAGCTGCTCAACGACAAGTTTGCAAAGCTC AACAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9726:66..1571+

>mRNA_P-wetherbeei_contig9726.1.2 ID=mRNA_P-wetherbeei_contig9726.1.2|Name=mRNA_P-wetherbeei_contig9726.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig9726:66..1571+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCATGCTTGTGGTGGTTGTGGCGGTGGCGTGCGGCGTCATCACCTC
TGCTGGCATATTCTTCCTCTACATCCTGACGCGCTTTGAGTTCCTCCTGT
CGGTGGAGGTTCACGGGTTCCTTGGCGTCCTCTGCGCCCTGGCGGTCGCC
GTCGCTCGCCGCCTCCCGGACGCGCTGCTGGTGCCCGGCACCGGCCTTGG
AACTCGTGGCATGCCGCTGGCGCTGCTCGCGCTGTCAGCGCTCTGCAAGG
CGGCCGGGCTGCGGGCGTTCGCGACGGACTTCCCCTTCGTCTGCGTCGGG
TCGTACGTTGGGTGGGCCTACCTGCGCTTTGTGCACGTGTACCCGGACGG
GATGCAAGGCGACATTTCGACGGACTTCGAGCTTGTCAACTTCCTGCCGG
CGCCGGTGCGGCCCATGGTCAAGCCCATGTGCGACTTTGCCTTCGGCGTG
TTGGGGCTGCTCGGACTCTTTCAGGATCGCGCGCGGCGGCAGCAGGCGCA
GCAGGACGCCGCGTCGGGGAAGGCGGGGCTTCCGCTGCTCGCACAGCACC
AAATAGAGACGGTGCAGGCACCGCGAGATCCAGTGGCGGAGCGACGGCGG
GCGCGGGCGATGCAGCTGCTCAACGACAAGTTTGCAAAGCTCAACAGC
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