mRNA_P-wetherbeei_contig9726.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: D8LIB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB0_ECTSI) HSP 1 Score: 175 bits (443), Expect = 2.160e-49 Identity = 103/213 (48.36%), Postives = 134/213 (62.91%), Query Frame = 1 Query: 28 VAVACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDALLVPG---TGLGTRGMPLALLALSALCKAAGLRAFATDFPFVCVGSYVGWAYLRF-VHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKLNS 654 V + G +TS GIF YI+TR E+LL +E+HG GVL ALAVA A++ A L+P TR +PL L+ SA+C+A + A DFPFV VG+Y W YLRF H+ GD++ DF+LVNF P P R +VKPMCDF +GV LLG F+ RA R G+ G+ L + T A +DP+AERRRARAM+LL++KFA LN+ Sbjct: 101 VGLVSGFVTSCGIFMGYIVTRQEYLLDLELHGSFGVLAALAVAAAQQDASATLLPAGRAPWFPTRYLPLLLVTASAMCRALSVPVVAKDFPFVVVGAYASWVYLRFFAHLVLGAPSGDVTEDFQLVNFFPLPCRRVVKPMCDFTYGVFLLLGCFKGRAARLPV--SVVDGQGGVDPLVVATLPTP-ARKDPIAERRRARAMKLLDEKFATLNA 310
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A836CJN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN9_9STRA) HSP 1 Score: 168 bits (425), Expect = 2.190e-46 Identity = 104/230 (45.22%), Postives = 134/230 (58.26%), Query Frame = 1 Query: 25 VVAVACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLP-DALLVPGT--GLGTRGMPLALLALSALCKAAGLRAFATDFPFVCVGSYVGWAYLRFVHVYPD--------------GMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRAR---RQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKLNS 654 +V VACGVITS IF LY++TR E+LLS+EVHG G++CALAVA A LP + L P G R +P+ + LS + AGLRA +TDFPFVCVGSY GW YLRF H +P + GD+S F L FLP R ++P+ DF +GV LLGLF+ RA + + + RDPVAERRRARAM+LL++KFA+L++ Sbjct: 96 IVCVACGVITSCAIFALYVVTRDEYLLSLEVHGAWGLVCALAVAFAHALPLEPLFAPPALRGFKVRHLPVTAITLSGILYGAGLRAMSTDFPFVCVGSYAGWVYLRFFHTFPPVAAATLPPGAAPTATIPGDVSDAFALAMFLPPFTRRWLRPLADFVYGVALLLGLFRARAEYAAHARLLRASXXXXXXXXXXXXXXXXXXXRARDPVAERRRARAMKLLDEKFAQLSA 325
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A7S2SH00_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH00_9STRA) HSP 1 Score: 122 bits (306), Expect = 5.880e-30 Identity = 80/204 (39.22%), Postives = 109/204 (53.43%), Query Frame = 1 Query: 25 VVAVACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDALLVPG-TGLGTRGMPLALLALSALCKAAGLRAFATDFPFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPR--DPVAERRRARAMQLL 627 VV + CGV+TS +F LY++TRFE L + GF G++ ALAVA+ P +P + L +P L LSA+ G + A D PFV G+Y W YLRFV+ + DG G + DF LV P P+R ++P+ DF GV LLG F+DR + + GL L P+ DPV ERRRA+A ++L Sbjct: 100 VVNIMCGVVTSTALFVLYVITRFEDYLFMPTFGFGGIMGALAVALKCFSPKEAPIPAMSALRYEHLPPLLAILSAMGWVVGWQLIARDTPFVLTGTYASWWYLRFVYRHADGSVGSVDEDFALVTLFPPPMRRYLEPVSDFCHGVCLLLGYFKDRKSPPKPAPEDQGPALGLELR----------PKIVDPVKERRRAKAAEML 293
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A7S2CKW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKW4_9STRA) HSP 1 Score: 114 bits (285), Expect = 9.190e-27 Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 1 Query: 43 GVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDALLVPGT-GLGTRGMPLALLALSALCKAAGLRAFATDFPFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFA 642 G++TS +F L+++TR E +L ++ +GF G++ ALAV + P +P L +P+ L +S C + AFA D PFV +G Y W YLRFVH DG+ G++S DF + P R + P +F +GV LLG F++R R A + +P Q+ DPVAERRRA+A + L+ K A Sbjct: 132 GLVTSVALFSLFVVTRMETVLFMQTYGFGGLIGALAVGLKLIAPRETPLPTVPSLKCHHLPMLLGIVSLFCWTLNITAFAKDTPFVVIGIYASWWYLRFVHKGRDGLVGNVSEDFAFITLFPPACRRYLSPFAEFTYGVACLLGYFKER-RPALAGMPSTEETPLVPASLLPQVH------DPVAERRRAKAREQLDAKLA 325
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A0P1ASK3_PLAHL (Predicted membrane protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASK3_PLAHL) HSP 1 Score: 103 bits (256), Expect = 7.510e-23 Identity = 75/214 (35.05%), Postives = 102/214 (47.66%), Query Frame = 1 Query: 37 ACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDALLVPGTGLGTRGMPLALLALSALCKAAGLRAFATD----------FPFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKL 648 A V+T +F LYI+ R L + GF G + AL VA + P A G+ R PL + C GL AFA + PF C+G Y GW YLRF++ D GD+S +F LV P P++ P+ F F V L G F+ RA ++ LP+L + DP+AERR+ARAM+ L++K AKL Sbjct: 84 ATAVVTFVSLFVLYIIFRNPSYLEMSFSGFTGGITALLVAYMKPYPFATAPSFPGISLRFYPLVVCLSFCFCTMVGL-AFAANPSVRSMLTSAGPFSCMGGYFGWYYLRFLNKNRDRTIGDVSDEFALVVLFPDFCAPLIGPVAGFCFSVAKLCGFFKKRAMQKPKM---------LPIL-------TEIKNDPIAERRKARAMKALDEKLAKL 280
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: M4BRC3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRC3_HYAAE) HSP 1 Score: 102 bits (254), Expect = 1.780e-22 Identity = 75/215 (34.88%), Postives = 104/215 (48.37%), Query Frame = 1 Query: 37 ACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLP--DALLVPGTGLGTRGMPLALLALSALCKAAGLRAFATDF---------PFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKL 648 A ++ +F LY++ R L GF G + AL VA + P A L PG L R PL + +LC AG+ A PF +G Y GW YLRF++ D GD+S +F LV LP P+V P+ +F F V+ L G F+ RA ++ LP+L + DP+AERR+ARAM+ L++K AKL Sbjct: 96 AAAIVLFVNLFMLYVVFRDPIYLEKSFSGFTGGITALLVAFMKPTPLATASLFPGVPL--RCYPLIACVVFSLCTLAGMMFTAVPAVSSILVSAGPFSVLGGYFGWYYLRFLNKNRDRTVGDVSNEFALVILLPDVCTPLVSPLANFCFNVVKLCGFFKKRAAQKPKM---------LPIL-------TEIKNDPIAERRKARAMRALDEKLAKL 292
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A833T097_PHYIN (Eukaryotic integral membrane protein (DUF1751) n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T097_PHYIN) HSP 1 Score: 100 bits (249), Expect = 9.360e-22 Identity = 75/215 (34.88%), Postives = 103/215 (47.91%), Query Frame = 1 Query: 37 ACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDAL--LVPGTGLGTRGMPLALLALSALCKAAGLRAFATDF---------PFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKL 648 A V+ +F LYI+ R L GF G + AL VA + P A L+PG L R PL LC G+ A PF +G Y GW YLRF++ D GD+S +F L+ LP P+V+P+ +F F V+ L G F+ RA ++ LP+L + DP+AERR+ARAM+ L++K AKL Sbjct: 96 AAAVVIFVNLFVLYIIFRNPIYLEASFSGFTGGMSALLVAYMKPTPFATAPLLPGVQL--RFYPLVACVTFCLCTMTGMVFTAIPALKLMLVGSGPFSVLGGYFGWYYLRFLNKNRDHTVGDVSDEFALIALLPDFFTPLVRPLANFCFSVVKLCGFFKKRATQKPKM---------LPIL-------TEIKNDPIAERRKARAMKALDEKLAKL 292
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A485KCW3_9STRA (Aste57867_5077 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCW3_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.700e-20 Identity = 79/209 (37.80%), Postives = 102/209 (48.80%), Query Frame = 1 Query: 49 ITSAGIFF-----LYILTRFEFLLSVEVHGFLGVLCALAVAVARRLP-DALLVPGTGLGTRGMPLALLALSALCKAAGLRA---FATDFPFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKL 648 + S G+ F LYI+ R F L V GF G L A+ VA+A+ P L+VP + + L+ L+ A RA P+ G Y GW YLRF+ DG GD S F L P +R ++P+CD F V L GLF +R DAA+ A LP TV DPVAERR+ARAM+ L++K AKL Sbjct: 99 VVSTGLLFCDMFCLYIIFRNPFFLRTGVSGFTGGLVAMLVALAKENPMQTLVVPKLSCRYYPLIVTLVCLTLSFLAVFTRAEILIVGAGPYALSGFYFGWFYLRFLAKNADGSVGDTSDAFSLAVLFPPFLRTTIQPICDLVFNVARLCGLFSNR--------DAAAA-ASLP--------TVAVASDPVAERRKARAMKALDEKLAKL 290
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A6A3NWD0_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NWD0_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.860e-20 Identity = 73/213 (34.27%), Postives = 100/213 (46.95%), Query Frame = 1 Query: 43 GVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDAL--LVPGTGLGTRGMPLALLALSALCKAAGLRAFATDF---------PFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKL 648 V+ +F LY++ R L GF G + AL VA + P A L PG L R PL + C G+ A PF +G Y GW YLRF++ D GD+S +F LV LP P+V P+ +F F V+ L G F+ RA ++ LP+L + DP+AERR+ARAM+ L++K AKL Sbjct: 98 AVVLFVNLFVLYVIFRNPIYLEASFSGFTGGITALLVAFMKPAPFATAPLFPGAPL--RFYPLVASVIFTFCTMVGMTFSAVSSISLMMLSAGPFSVLGGYFGWYYLRFLNKNRDQTVGDVSDEFALVVLLPDFCTPLVGPLANFCFSVVKLCGFFKKRAAQKPKM---------LPIL-------TEIKNDPIAERRKARAMKALDEKLAKL 292
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Match: A0A3F2RU99_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RU99_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 4.920e-20 Identity = 69/213 (32.39%), Postives = 102/213 (47.89%), Query Frame = 1 Query: 37 ACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAVARRLPDALLVPGTGLGTRGMPLALLALSALCKAAGLRAFA---------TDFPFVCVGSYVGWAYLRFVHVYPDGMQGDISTDFELVNFLPAPVRPMVKPMCDFAFGVLGLLGLFQDRARRQQAQQDAASGKAGLPLLAQHQIETVQAPRDPVAERRRARAMQLLNDKFAKL 648 A ++ +F LYI+ R L GF G + AL VA + P A G+ R PL + + C GL A + PF +G + GW YLRF++ D GD+S +F L+ LP +P++ P+ +F F V+ L G F+ RA ++ LP+L + DP+AERR+ARAM+ L++K AKL Sbjct: 96 AAALVLFVNLFVLYIVFRDPIYLEANFSGFTGGITALLVAYMKPTPYAAAPLFPGVQLRYYPLVASGVFSFCSIFGLAFSAGPAVSIMLVSAGPFSVLGGFFGWYYLRFLNKNRDQTVGDVSDEFALIVLLPDFSKPVIGPLANFCFSVVKLCGFFKKRAAQKPKM---------LPIL-------TEIKNDPIAERRKARAMKALDEKLAKL 292 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9726.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9726.1.2 >prot_P-wetherbeei_contig9726.1.2 ID=prot_P-wetherbeei_contig9726.1.2|Name=mRNA_P-wetherbeei_contig9726.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp MLMLVVVVAVACGVITSAGIFFLYILTRFEFLLSVEVHGFLGVLCALAVAback to top mRNA from alignment at P-wetherbeei_contig9726:66..1571+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9726.1.2 ID=mRNA_P-wetherbeei_contig9726.1.2|Name=mRNA_P-wetherbeei_contig9726.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1506bp|location=Sequence derived from alignment at P-wetherbeei_contig9726:66..1571+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9726:66..1571+ >mRNA_P-wetherbeei_contig9726.1.2 ID=mRNA_P-wetherbeei_contig9726.1.2|Name=mRNA_P-wetherbeei_contig9726.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig9726:66..1571+ (Phaeothamnion wetherbeei SAG_119_79)back to top |