mRNA_P-wetherbeei_contig9724.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9724.1.2 vs. uniprot
Match: A0A836CN48_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN48_9STRA) HSP 1 Score: 207 bits (528), Expect = 2.250e-60 Identity = 100/223 (44.84%), Postives = 144/223 (64.57%), Query Frame = 3 Query: 537 PSYRPEGTGNRRVPFTEEIQKEIWWHQNPASCEGKRFAVVHNWKGGGMGSLVHVVGAALAWAWNNDRILVYGSDFGSGLSHGSYCKDDAT-FTCFFQPLSMCKSPGPPTGETDVVVTVQGAKLSSEIPSTWKQTWLDSGHNSSIKHWWRGQSAAYILRLNDRTSEVLRSSRLLLAASEVAPLPLPQDTVSIHVRHGDKYKEMSLKSWDDHVSLAEAMAADRHF 1202 P++RPEG + R+ FTEE+Q +IW HQNP+SCEG+++ + GG+GSL+HV ALA A + ILVY +D+G+ SHGS+C D++ CFF P+S C + + T + + + K E+P W+Q W ++ + + +WWR Q+ +Y+ RLN TS L + RL AA+ APLPLP DTVS+HVRHGDK EM L+SW +H + A+ +A RHF Sbjct: 1 PNFRPEGKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHGSFCAPDSSNLDCFFMPVSNCSAYVADSNLTQLPIPLV-RKRRLEVPEKWRQRWAETRQTADLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHF 222
BLAST of mRNA_P-wetherbeei_contig9724.1.2 vs. uniprot
Match: A0A835ZAN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN1_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.350e-58 Identity = 104/236 (44.07%), Postives = 143/236 (60.59%), Query Frame = 3 Query: 519 IPEWYGPSYRPEGTGNRRVPFTEEIQKEIWWHQNPASCEGKRFAVVHNWKGGGMGSLVHVVGAALAWAWNNDRILVYGSDFGSGLSHGSYCKDDA-TFTCFFQPLSMCKS-------PGPPTGETDVVVTVQGAKLSSEIPSTWKQTWLDSGHNSSIKHWWRGQSAAYILRLNDRTSEVLRSSRLLLAASEVAPLPLPQDTVSIHVRHGDKYKEMSLKSWDDHVSLAEAMAADRHF 1202 +P +Y PS+RP G R FT E+Q +IW HQNP SC+G+++ + GG+GSL+HV AA+A+A + ILVY D+G+ LSHGS+C + + CFF PLS C + PG P V V +L ++P W+Q W D+ + +WWR Q+ AY+ RLN +TS L S R AA+ PLPLP DTVS+HVRHGDK EM+L+SW +H + A+ +A R F Sbjct: 34 LPAFYQPSFRPVGREGARPVFTAEVQADIWQHQNPPSCDGRKYLRLQPHTQGGLGSLLHVTTAAIAYAMQQNAILVYHKDYGATLSHGSFCPAHSRSLNCFFMPLSNCSAYMADAEMPGLP------VYKVGRRRL--DVPKKWRQRWADTRQKGDLLYWWRAQAVAYVTRLNPQTSRELISRRRAHAAAGTVPLPLPNDTVSVHVRHGDKGAEMALRSWQEHKTRADELAKARRF 261
BLAST of mRNA_P-wetherbeei_contig9724.1.2 vs. uniprot
Match: A0A836CMT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT9_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.990e-48 Identity = 95/228 (41.67%), Postives = 123/228 (53.95%), Query Frame = 3 Query: 519 IPEWYGPSYRPEGTGNRRVPFTEEIQKEIWWHQNPASCEGKRFAVVHNWKGGGMGSLVHVVGAALAWAWNNDRILVYGSDFGSGLSHG---SYCKDDAT--FTCFFQPLSMCKSPGPPTGETDVVVTVQGAKLSSEIPSTWKQTWLDSGHNSSIKHWWRGQSAAYILRLNDRTSEVLRSSRLLLAASEVAPLPLPQDTVSIHVRHGDKYKEMSLKSWDDHVSLAEAMA 1187 +P WY P+YR R+PFTEE+Q +IW HQNP SCE + F V+ K G+G L+ V LAWA + ILV F + + G SYC + CFF PLS C E + L +P+ W++ W ++ S+ WWR Q+ AY RLN RT+ L RL AA+ APLPLP T+S+HVRHGDKYKE+ L SW DH+ A A Sbjct: 53 LPPWYAPNYRISDAFASRLPFTEEVQADIWAHQNPQSCENRTF-VLQGSKPAGLGYLMGVANFPLAWAMEHGHILVLHQGFAAAQAEGEQDSYCSSQQLRGWDCFFMPLSNCSDHIGKRVERNFKWAPTADPL---VPAKWQRRWAETNQTGSLLQWWRAQTTAYATRLNARTARELALRRLRSAAAGAAPLPLPPGTISVHVRHGDKYKELELMSWGDHLGAVNAAA 276
BLAST of mRNA_P-wetherbeei_contig9724.1.2 vs. uniprot
Match: A0A835YGT7_9STRA (FUT8_N_cat domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGT7_9STRA) HSP 1 Score: 185 bits (469), Expect = 9.150e-48 Identity = 95/229 (41.48%), Postives = 133/229 (58.08%), Query Frame = 3 Query: 519 IPEWYGPSYRPEG-TGNRRVPFTEEIQKEIWWHQNPASCEGKRFAVVHNWKGGGMGSLVHVVGAALAWAWNNDRILVYGSDFGSGLSHGSYCKDDATFT--CFFQPLSMCKSPGPPTGETDVVVTVQGAKLSSEIPSTWKQTWLDSGHNSSIKHWWRGQSAAYILRLNDRTSEVLRSSRLLLAASEVAPLPLPQDTVSIHVRHGDKYKEMSLKSWDDHVSLAEAMAADR 1196 +PE+Y +YRP+ + N +PFT+E+Q +IW HQNP SCEG+ F N G +GS++HV A L +A+N ILV+G FG G C + F CFF P S C + T V + ++P W+ W D+ I +WWR Q+ AY+ R N++T+E+LR RL +A VAPLPLP +TVS+HVRHGDK EM +W++H+ AE +A R Sbjct: 75 LPEFYQANYRPKQLSDNPLLPFTKEVQADIWKHQNPPSCEGQSFIHQPNHPAG-LGSVLHVATAGLGYAFNQKSILVFGEYFGQQFGSGRLCDEAGAFNSQCFFMPASNCSTFV--NASTVPAVPHKMKDYEMQVPQKWRTRWQDTNQTGDIIYWWRAQAVAYLFRFNEQTAEMLRVRRLQIARQGVAPLPLPPNTVSVHVRHGDKVNEMKTYTWEEHLVRAEDVAKAR 300
BLAST of mRNA_P-wetherbeei_contig9724.1.2 vs. uniprot
Match: A0A835YS04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS04_9STRA) HSP 1 Score: 160 bits (406), Expect = 4.530e-41 Identity = 92/252 (36.51%), Postives = 135/252 (53.57%), Query Frame = 3 Query: 483 TLTGTSTSNAGDIPEWYGP--SYRPEGTGNRRVPFTEEIQKEIWWHQNPASCEGKRFAVVHNWKGGGMGSLVHVVGAALAWAWNNDRILVYGSDFGSGLSHGSYCKDDATFTCFFQPLSMCKSPGPPTGETDVVVTVQGAKLSSE-----IPSTWKQTWLDSGHNSS----IKHWWRGQSAAYILRLNDRTSEVLRSSRLLLAASEVAPLPLPQDTVSIHVRHGDKYKEMSLKSWDDHVSLAEAMAADRHFS 1205 T + T + +P WY + P + R+ FT E+Q++IW HQNP +CEG+R+ + G G+GS+++ L +A N I++Y G+ GSYC C F P S C + VTV+ L +P W Q W ++ +SS +++WWR Q+A Y RLN RTS+ L + R+ AAS APLPLP +T+S+HVRHGDK EM L SW+ H++ A+ +A + FS Sbjct: 70 TESSGHTGSDAQVPHWYHSHDTIAPADGDSARLRFTAEVQQDIWRHQNPPTCEGQRYMETPH-HGFGLGSILNRASGMLGFAMNKGVIMLYHEKLGAPNFLGSYCAGVLNPACIFMPPSNCTAYARNPRNN---VTVEKNYLDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFTRLNARTSQELITRRMRSAASGAAPLPLPPNTISVHVRHGDKRSEMKLASWNAHLARADRLAHKQGFS 317
BLAST of mRNA_P-wetherbeei_contig9724.1.2 vs. uniprot
Match: A0A835YU43_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU43_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.060e-40 Identity = 89/246 (36.18%), Postives = 127/246 (51.63%), Query Frame = 3 Query: 483 TLTGTSTSNAGDIPEWYGPSYRPEGTGNRRVPFTEEIQKEIWWHQNPASCEGKRFAVV--HNWKGGGMGSLVHVVGAALAWAWNNDRILVYGSDFGSGLSHGSYCKDDATFTCFFQPLSMCKSPG-PPTGETDVVVTVQGAKLSSEI-PSTWKQTWLDSGHNSS----IKHWWRGQSAAYILRLNDRTSEVLRSSRLLLAASEVAPLPLPQDTVSIHVRHGDKYKEMSLKSWDDHVSLAEAMAADR 1196 T S +A +P WY G + R+ FT E+Q +IW HQNP +CEG+R+ H + G+GSL++ L +A N I++Y + GS GSYC +C F P S C + P + + + P W Q W ++ +SS +++WWR Q+A Y RLN RTS+ + + RL AA APLPLP DT+++HVRHGDK EM L SW H + + +A R Sbjct: 56 TAAARSGHSAAQVPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRF---GLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYCAGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQR 298
BLAST of mRNA_P-wetherbeei_contig9724.1.2 vs. uniprot
Match: A0A836CJ51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ51_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.690e-39 Identity = 88/234 (37.61%), Postives = 118/234 (50.43%), Query Frame = 3 Query: 519 IPEWYGPSYRPEGTGNRRVPFTEEIQKEIWWHQNPASCEGKRFAVVHNWKGGGMGSLVHVVGAALAWAWNNDRILVYGSDFGSGLSHGSYCKDDATF--TCFFQPLSMCKSPGPPTGETDVVVTVQG----AKLSSEIP--STWKQTWLDSGHNSSIKHWWRGQSAAYILRLNDRTSEVLRSSRLLLAASEVAPLPLPQDTVSIHVRHGDKYKEMSLKSWDDHVSLAEAMAADR 1196 +P WY P +R GT R+P TEE+Q +IW QNP +C G VVH G+ + +H +L A + I + + G+ G YC + +CFF P S C G V V +K SE+P S W++ ++ +WWR Q A Y+ R N RTS L R AA PLPLP +T SIHVRHGDK+KEM+L+SWD H+ A+ A R Sbjct: 15 LPPWYQPYFRLSGTPQTRLPLTEEVQADIWRSQNPPACAGHAL-VVHRRSNFGLSAQLHWAAGSLGMAMEHGHIFTWHAASGTKAFMGRYCDEAGVHNPSCFFVPPSNCSDQAAAAGAAVVPYAVHNYTIPSKFESEMPPGSPWRKV-------MTLNYWWRAQVATYLFRFNKRTSRELIQRRQRSAARGAPPLPLPPNTFSIHVRHGDKWKEMNLQSWDAHLHAADVAARAR 240
BLAST of mRNA_P-wetherbeei_contig9724.1.2 vs. uniprot
Match: A0A835Z6Q9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q9_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.500e-33 Identity = 83/241 (34.44%), Postives = 117/241 (48.55%), Query Frame = 3 Query: 519 IPEWYGPSYRPEGTGNRRVPFTEEIQKEIWWHQNPASCEGKRFAVVHNWKGGGMGSLVHVVGAALAWAWNNDRILVYGSDFGSGLSHGSYCKDDATF--TCFFQPLSMCKSPGPPT-----------GETDVVVTVQGAKLSSEIP--STWKQTWLDSGHNSSIKHWWRGQSAAYILRLNDRTSEVLRSSRLLLAASEVAPLPLPQDTVSIHVRHGDKYKEMSLKSWDDHVSLAEAMAADR 1196 IP WY P++R G + R+P TEE+Q +IW QNP SC G R V+H G+ + +H +L A + + + + G+ G YC +C P + C G+ + T + +E+P S W++ ++ +WWR Q A Y+ RLN+RTS L R AA APLPLP D S+HVRHGDK+KEM+L+SWD H A A R Sbjct: 187 IPPWYQPNFRLSGAPHTRLPLTEEVQDDIWRSQNPPSCAG-RALVLHPPSDYGLSAELHWAAGSLGMAMEHGHLFSWHAATGASAFTGHYCDAAGAHNPSCLLMPPTNCTDHAAAVAAGVEIVPYKAGQNYTIPTKWRNRFEAEVPPGSPWRKV-------MTLNYWWRAQVATYLFRLNERTSHELTQRRRASAARGSAPLPLPLDAFSVHVRHGDKWKEMTLQSWDAHEGAARDAARAR 419
BLAST of mRNA_P-wetherbeei_contig9724.1.2 vs. uniprot
Match: A0A835ZC10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC10_9STRA) HSP 1 Score: 129 bits (324), Expect = 6.310e-31 Identity = 64/175 (36.57%), Postives = 94/175 (53.71%), Query Frame = 3 Query: 687 LVHVVGAALAWAWNNDRILVYGSDFGSGLSHGSYCKDDATFT--CFFQPLSMCKSPGPPTGETDVVVTVQGAKLSSEIPSTWKQTWLDSGHNSSIKHWWRGQSAAYILRLNDRTSEVLRSSRLLLAASEVAPLPLPQDTVSIHVRHGDKYKEMSLKSWDDHVSLAEAMAADRHFS 1205 ++HV A L +A+N IL+YG D+G G C CFF P S C + V + +++P W+ W + I +WWR Q+ AY+ R N +T+E L + RL +A VAPLPLP +TVS+HVRHGDK EM+ SW++H++ A+ +A R + Sbjct: 1 MLHVATAGLGYAFNQGSILLYGDDYGKHFGSGRLCDAAGAHNSQCFFMPASNCSATVDAAAAP--AVPQKAWDYRTQVPQKWRDRWEATNQTGDIVYWWRAQAVAYLFRFNPQTAEALSARRLQIARQGVAPLPLPLNTVSVHVRHGDKVVEMTTFSWEEHLARAQDVAEARRLA 173
BLAST of mRNA_P-wetherbeei_contig9724.1.2 vs. uniprot
Match: A0A836CC71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC71_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.120e-22 Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 3 Query: 864 ETDVVVTVQGAKLSSEIPSTWKQTWLDSGHNSSIKHWWRGQSAAYILRLNDRTSEVLRSSRLLLAASEVAPLPLPQDTVSIHVRHGDKYKEMSLKSWDDHVSLAEAMA 1187 E + ++TV G +S +P+ W++ W ++ ++ +WWR Q +AY+LR N RT+ L RL AAS PLPLP T ++HVRHGDK+KEM+L SW DH++ EA A Sbjct: 124 EINHLMTVSGG--ASSVPAKWQRRWAETNQTMNLLYWWRAQGSAYLLRFNARTARELALRRLRAAASGAVPLPLPPGTAAVHVRHGDKFKEMALMSWRDHLAAVEAAA 229 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9724.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9724.1.2 >prot_P-wetherbeei_contig9724.1.2 ID=prot_P-wetherbeei_contig9724.1.2|Name=mRNA_P-wetherbeei_contig9724.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=295bp MLLAAVILVAMILIAVLLLIRLWGAPDGTAAALKESWASSSPVWAIAVVAback to top mRNA from alignment at P-wetherbeei_contig9724:544..1966+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9724.1.2 ID=mRNA_P-wetherbeei_contig9724.1.2|Name=mRNA_P-wetherbeei_contig9724.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1423bp|location=Sequence derived from alignment at P-wetherbeei_contig9724:544..1966+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9724:544..1966+ >mRNA_P-wetherbeei_contig9724.1.2 ID=mRNA_P-wetherbeei_contig9724.1.2|Name=mRNA_P-wetherbeei_contig9724.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=885bp|location=Sequence derived from alignment at P-wetherbeei_contig9724:544..1966+ (Phaeothamnion wetherbeei SAG_119_79)back to top |