mRNA_P-wetherbeei_contig9718.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9718.1.1
Unique NamemRNA_P-wetherbeei_contig9718.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9718.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9718contigP-wetherbeei_contig9718:603..2372 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LHH6
Model size1478
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.13e-08
EggNOG OGs28MMI@1|root,2QU5A@2759|Eukaryota
Cds size1476
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187107.0185232-CDS-P-wetherbeei_contig9718:602..8601683187107.0185232-CDS-P-wetherbeei_contig9718:602..860Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9718 603..860 -
1683187107.0277748-CDS-P-wetherbeei_contig9718:1154..23721683187107.0277748-CDS-P-wetherbeei_contig9718:1154..2372Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9718 1155..2372 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9718.1.1prot_P-wetherbeei_contig9718.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9718 603..2372 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9718.1.1

>prot_P-wetherbeei_contig9718.1.1 ID=prot_P-wetherbeei_contig9718.1.1|Name=mRNA_P-wetherbeei_contig9718.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=492bp
MGNGALSGLVVAAGAGCGAPRGQMRVSICKMVKVVGVYCRPQIAVEQRVV
DLGKLGHSASDLGRRAFPLRVRNACQAALSIGIEVGGGASGILQLEGWRP
AAAAATDWWQQVGAGSCGAAAGIAVPAKAVPPTAAMQAAVATLVAAGSTG
GGHGDTSVNDSRNGGGINGGGCPPAAPDGAPSNGAAYGAMRGPIPIAARG
EVTLLLVLRLPAEGDWSGMHTVPLRVVNLADPSDAVPVEIRVQVVTRLLQ
LLDRSHEPLPVPPPPPPLAALLAMPLVRAEELKKPQAAAAAAGEAASAGR
KPAAGETGAAAAAAVAGAQVAGALVLAGDDGLCRPVGAMLQLPSLTVPAE
AGGPSSAALDGEASTTMLALKNVFDEAVTVLLSLQIPPQLRETVAVVLRM
RPSYAPVSTLTLVPGEVVEMRVECCALPGARLRADLLPAPDEAAANVGGG
GSWRCRLATLSLRMSIHDAASGGKRYGAGGVPGVTPSASAVV
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mRNA from alignment at P-wetherbeei_contig9718:603..2372-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9718.1.1 ID=mRNA_P-wetherbeei_contig9718.1.1|Name=mRNA_P-wetherbeei_contig9718.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1770bp|location=Sequence derived from alignment at P-wetherbeei_contig9718:603..2372- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCAACGGCGCACTCTCCGGGCTGGTAGTGGCGGCGGGTGCGGGCTG
TGGCGCGCCCCGCGGCCAAATGCGCGTCAGCATCTGCAAGATGGTGAAGG
TGGTCGGCGTCTACTGCCGCCCGCAGATCGCCGTCGAGCAGCGGGTGGTG
GATCTTGGCAAGCTCGGTCACTCCGCGTCGGACCTTGGGCGTCGCGCCTT
TCCGCTGCGGGTTCGCAACGCCTGTCAGGCAGCACTTTCTATCGGCATCG
AGGTCGGCGGCGGCGCTTCGGGCATCCTGCAGCTGGAGGGATGGCGGCCG
GCGGCGGCAGCGGCGACCGACTGGTGGCAACAGGTCGGAGCTGGCAGCTG
CGGAGCGGCTGCTGGCATTGCTGTCCCGGCGAAGGCGGTGCCTCCGACTG
CGGCGATGCAGGCGGCGGTAGCGACGCTCGTGGCGGCGGGCTCGACCGGA
GGCGGACACGGCGACACCAGTGTCAACGACAGTCGCAACGGCGGCGGTAT
TAATGGCGGCGGCTGCCCCCCTGCCGCTCCCGACGGCGCCCCTTCCAACG
GCGCCGCCTATGGCGCCATGCGGGGGCCGATCCCGATCGCCGCGCGAGGC
GAGGTGACGCTGCTGCTCGTGCTGCGGCTGCCGGCGGAGGGCGACTGGTC
AGGCATGCACACCGTGCCTCTGCGTGTCGTCAACCTGGCGGACCCGTCCG
ACGCGGTTCCGGTCGAGATCCGGGTGCAGGTCGTGACGAGGCTCCTGCAG
CTGCTCGACCGATCGCACGAGCCGCTGCCAGTGCCGCCGCCGCCGCCGCC
TCTGGCAGCGCTGCTGGCAATGCCGCTGGTCAGAGCGGAGGAGTTAAAGA
AACCGCAAGCGGCGGCGGCCGCAGCCGGAGAGGCTGCGTCGGCGGGAAGG
AAGCCGGCGGCTGGAGAAACCGGAGCGGCGGCGGCGGCGGCAGTGGCAGG
TGCGCAGGTTGCCGGGGCGCTGGTGCTGGCGGGCGACGACGGCCTCTGCA
GGCCGGTTGGGGCTATGCTGCAGCTGCCGTCGCTGACAGTGCCGGCCGAG
GCGGGCGGCCCTTCGTCGGCGGCGCTCGACGGCGAGGCGTCGACGACGAT
GCTGGCGCTCAAGAACGTTTTCGACGAGGCGGTCACGGTGCTGCTCTCGT
TGCAGATACCGCCGCAGCTGCGGGAGACGGTCGCCGTGGTGTTGCGGATG
CGGCCGTCGTACGCGCCGGTGATATTTGCATTTGCGTTCGCTGTCTTGGG
AGGGGCTCAAACTTTGCTCTGTGTTTCTTCTTCGCATGGGCTGCCGTCTT
CCAACCGTCGCTTGCTTTATCAGGAGCTGGCGTAGATGGCGAAAATAGCC
AGAAGCGCCGTTTCGGTTCATGCGGACGCGTTTTATTTGCTATTCAGCTC
ATCATCTTTATAAGCAAATATCACATGGCGCCTGTTGCGGGCAGGGCAGT
GGATGGCGTTTCATGAGAGAAAGGCTGAATTGGATAAATGCTTATCCGCT
GCAACAAAACAGGTGTCGACTCTGACGCTGGTCCCTGGGGAGGTGGTGGA
AATGCGCGTCGAATGCTGCGCGTTGCCCGGGGCCCGCCTGCGCGCAGATC
TGCTGCCGGCGCCCGACGAGGCCGCGGCAAATGTCGGCGGTGGCGGCAGC
TGGCGCTGCCGTCTCGCAACGCTCAGCCTGCGCATGAGCATTCACGACGC
TGCGTCTGGCGGCAAGCGCTACGGCGCCGGTGGCGTTCCGGGAGTGACGC
CGTCGGCGTCGGCGGTGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9718:603..2372-

>mRNA_P-wetherbeei_contig9718.1.1 ID=mRNA_P-wetherbeei_contig9718.1.1|Name=mRNA_P-wetherbeei_contig9718.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1476bp|location=Sequence derived from alignment at P-wetherbeei_contig9718:603..2372- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCAACGGCGCACTCTCCGGGCTGGTAGTGGCGGCGGGTGCGGGCTG
TGGCGCGCCCCGCGGCCAAATGCGCGTCAGCATCTGCAAGATGGTGAAGG
TGGTCGGCGTCTACTGCCGCCCGCAGATCGCCGTCGAGCAGCGGGTGGTG
GATCTTGGCAAGCTCGGTCACTCCGCGTCGGACCTTGGGCGTCGCGCCTT
TCCGCTGCGGGTTCGCAACGCCTGTCAGGCAGCACTTTCTATCGGCATCG
AGGTCGGCGGCGGCGCTTCGGGCATCCTGCAGCTGGAGGGATGGCGGCCG
GCGGCGGCAGCGGCGACCGACTGGTGGCAACAGGTCGGAGCTGGCAGCTG
CGGAGCGGCTGCTGGCATTGCTGTCCCGGCGAAGGCGGTGCCTCCGACTG
CGGCGATGCAGGCGGCGGTAGCGACGCTCGTGGCGGCGGGCTCGACCGGA
GGCGGACACGGCGACACCAGTGTCAACGACAGTCGCAACGGCGGCGGTAT
TAATGGCGGCGGCTGCCCCCCTGCCGCTCCCGACGGCGCCCCTTCCAACG
GCGCCGCCTATGGCGCCATGCGGGGGCCGATCCCGATCGCCGCGCGAGGC
GAGGTGACGCTGCTGCTCGTGCTGCGGCTGCCGGCGGAGGGCGACTGGTC
AGGCATGCACACCGTGCCTCTGCGTGTCGTCAACCTGGCGGACCCGTCCG
ACGCGGTTCCGGTCGAGATCCGGGTGCAGGTCGTGACGAGGCTCCTGCAG
CTGCTCGACCGATCGCACGAGCCGCTGCCAGTGCCGCCGCCGCCGCCGCC
TCTGGCAGCGCTGCTGGCAATGCCGCTGGTCAGAGCGGAGGAGTTAAAGA
AACCGCAAGCGGCGGCGGCCGCAGCCGGAGAGGCTGCGTCGGCGGGAAGG
AAGCCGGCGGCTGGAGAAACCGGAGCGGCGGCGGCGGCGGCAGTGGCAGG
TGCGCAGGTTGCCGGGGCGCTGGTGCTGGCGGGCGACGACGGCCTCTGCA
GGCCGGTTGGGGCTATGCTGCAGCTGCCGTCGCTGACAGTGCCGGCCGAG
GCGGGCGGCCCTTCGTCGGCGGCGCTCGACGGCGAGGCGTCGACGACGAT
GCTGGCGCTCAAGAACGTTTTCGACGAGGCGGTCACGGTGCTGCTCTCGT
TGCAGATACCGCCGCAGCTGCGGGAGACGGTCGCCGTGGTGTTGCGGATG
CGGCCGTCGTACGCGCCGGTGTCGACTCTGACGCTGGTCCCTGGGGAGGT
GGTGGAAATGCGCGTCGAATGCTGCGCGTTGCCCGGGGCCCGCCTGCGCG
CAGATCTGCTGCCGGCGCCCGACGAGGCCGCGGCAAATGTCGGCGGTGGC
GGCAGCTGGCGCTGCCGTCTCGCAACGCTCAGCCTGCGCATGAGCATTCA
CGACGCTGCGTCTGGCGGCAAGCGCTACGGCGCCGGTGGCGTTCCGGGAG
TGACGCCGTCGGCGTCGGCGGTGGTG
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