mRNA_P-wetherbeei_contig9714.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9714.1.1
Unique NamemRNA_P-wetherbeei_contig9714.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9714.1.1 vs. uniprot
Match: UPI0004DFA9FF (GTP-binding protein n=1 Tax=Thiomonas sp. FB-Cd TaxID=1158292 RepID=UPI0004DFA9FF)

HSP 1 Score: 283 bits (723), Expect = 1.520e-90
Identity = 151/342 (44.15%), Postives = 210/342 (61.40%), Query Frame = 1
Query:    4 TPVALLTGFLGSGKTTLLSRMLAQGGFKDTAVIVNEFGEISIDHLVVADLAENILELRDGCLCCTIRGDLVMTLRDLNRRRYLEEIPYFSRVIVETTGLADPVPLVHTMMANAPIMTAYKLDAVICVVDGEHGLATLAQHDTAQDQVAMADILVVSKVDVAARDTLDALRARIAGINADAEVVEVAKGEIDATQLFGRSLFQPEARDEALARWM--------------GAAHAHHDHGARYGAHVIRHNGALSLAGTSVFLNRVVNEMKDDILRIKGIAAFREK-----GGKPAVVHAVQNKFYPVSYLTSWPDADHTSRLVFIGRNLNTARIDELFAALCV 972
            TPV +L G LGSGKTTLL   L     + TA+I+NEFG++SIDHL+VA LAEN++ELR GC+CC +R D  MTLRDL  +R L E+P F  VI+ET+GLADPVP++HT+MAN  + T +  DAV+  VD  +   T+++   A  QV +AD+++++K D+A  +      A +   N  A++++V  G  DA  +F R +F+       L  W+              G AH     G R   HVIR    + +AG  VFLNRV N M++ +LRIKG+A  + +        P VVHAV+ KFYP+ +L +WPD D ++RLVFIGR L+ AR+D LF  LC+
Sbjct:    6 TPVTILAGHLGSGKTTLLQHCLEHPALQRTALIINEFGDVSIDHLMVAQLAENVVELRGGCICCAVRVDFAMTLRDLYEKRQLGEVPMFDHVILETSGLADPVPILHTLMANPLMHTRFVPDAVVTCVDQVNYERTVSEDPVAMSQVQLADVVILTKGDLATPEQRARTEALVRAANGQAQLMQVTLGLADAATIFLRGVFEAGRSLPGLGGWLLAGKPMAQLSGNPSGGAHR----GPRPTTHVIRTEQPVDMAGLGVFLNRVTNSMREQLLRIKGVANVKSRPRHIRSQGPLVVHAVREKFYPLQWLDAWPDDDRSTRLVFIGRELDGARLDRLFEQLCL 343          
BLAST of mRNA_P-wetherbeei_contig9714.1.1 vs. uniprot
Match: UPI00047A870A (GTP-binding protein n=1 Tax=Fodinicurvata fenggangensis TaxID=1121830 RepID=UPI00047A870A)

HSP 1 Score: 272 bits (695), Expect = 5.360e-86
Identity = 152/344 (44.19%), Postives = 210/344 (61.05%), Query Frame = 1
Query:    7 PVALLTGFLGSGKTTLLSRMLAQGGFKDTAVIVNEFGEISIDHLVVADLAENILELRDGCLCCTIRGDLVMTLRDLNRRRYLEEIPYFSRVIVETTGLADPVPLVHTMMANAPIMTAYKLDAVICVVDGEHGLATLAQHDTAQDQVAMADILVVSKVDVAARDTLDALRARIAGINADAEVVEVAKGEIDATQLFGRSLFQPEARDEALARWM------------GAAHAHHDHGA------------RYGAHVIRHNGALSLAGTSVFLNRVVNEMKDDILRIKGIAAFREKGGKPAVVHAVQNKFYPVSYLTSWPDADHTSRLVFIGRNLNTARIDELFAAL 966
            PV++LTGFLGSGKTTLL  +L++    DTAVIVNEFGE+ +DH++VAD  E I+EL  GCLCCT+R DLV TL  L  +R   EI  FSRV++ETTGLADP P++HT+M +  +   ++LD VI V+DG +GLATL +H+ A  Q A+AD LV++K D+       AL AR+  +N  A   +   G+I    LFG   +  E R E + RW+            G  H HH++G             R  A  +     +S+AG ++FL  +V     DILR+KGI    EK  KPAV+H VQ+ F+PV ++  WPDAD ++RLVFI R+++   I++L  +L
Sbjct:    5 PVSILTGFLGSGKTTLLRHLLSRPELSDTAVIVNEFGEVGLDHVLVADSEEQIVELNSGCLCCTVRWDLVTTLDTLFTKRESGEIAPFSRVVIETTGLADPAPVLHTLMNDPKLAARFRLDGVITVIDGVNGLATLDRHEEAVKQAAVADRLVITKSDLPEAKCA-ALEARLENLNPGARQEKAVLGDIAPDVLFGAGFYALEERGENVRRWLQEEAYRATHGEGGHDHDHHENGXXXXXXXXXXXDDRIRAFSVVREEPVSVAGFTLFLELLVANRGPDILRVKGIVNIEEKPEKPAVIHGVQHLFHPVVWMDDWPDADRSTRLVFITRDVSQQWIEKLLDSL 347          
BLAST of mRNA_P-wetherbeei_contig9714.1.1 vs. uniprot
Match: A0A257DEL3_9BURK (GTP-binding protein n=1 Tax=Burkholderiales bacterium PBB1 TaxID=2015563 RepID=A0A257DEL3_9BURK)

HSP 1 Score: 273 bits (697), Expect = 5.710e-86
Identity = 156/344 (45.35%), Postives = 206/344 (59.88%), Query Frame = 1
Query:    7 PVALLTGFLGSGKTTLLSRMLAQGGFKDTAVIVNEFGEISIDHLVVADLAENILELRDGCLCCTIRGDLVMTLRDLNRRRYLEEIPYFSRVIVETTGLADPVPLVHTMMANAPIMTAYKLDAVICVVDGEHGLATLAQHDTAQDQVAMADILVVSKVDVAARDTLDALRARIAGINADAEVVEVAKGEIDATQLFGRSLFQP----EARDEALARWMGAAHAHHD-------------HGARYGAHVIRHNGALSLAGTSVFLNRVVNEMKDDILRIKGIAAFREKGGK-----PAVVHAVQNKFYPVSYLTSWPDADHTSRLVFIGRNLNTARIDELFAALCV 972
            PV +LTG LGSGKTTLL R L     + TA+I+NEFGE+SIDHL+VA LAENI++LR GC+CC +R DL MTLRDL+ +R L EIP F  VI+ET+GLADPVP++HTMMAN  +   Y  DAV+  VD  +   TL     A  Q+ MAD+++++K D+A  +  +  RA +   N  A  ++V +G+ DA+ +F R LF+     +    A    M      H               G R   HVI  +  + L G  VFLNRV N M D ILRIKGI     +        P VVHAV+ KFYP+ ++  WPD D ++RLVFIGR+L++  ID LF  LC+
Sbjct:   43 PVTVLTGHLGSGKTTLLQRALEHPLLQRTALIINEFGEVSIDHLMVAQLAENIVQLRGGCICCAVRVDLAMTLRDLHHKRQLGEIPAFDHVIIETSGLADPVPILHTMMANPMMQKHYAPDAVVTCVDQINLERTLQDDAVALSQLQMADVVILTKGDLATPEQRERSRALVHEANPHARQMQVTQGDADASTIFLRGLFEAGRTLQPAGGASGWLMAGQPMRHGTPRDDTGTDPSVHRGPRPTTHVIHTDTPVDLVGLGVFLNRVTNTMSDRILRIKGIVNVASRPRHVTTQGPLVVHAVREKFYPLQWMPDWPDDDRSTRLVFIGRDLDSDWIDALFGGLCL 386          
BLAST of mRNA_P-wetherbeei_contig9714.1.1 vs. uniprot
Match: A0A537UV36_9PROT (GTP-binding protein n=4 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A537UV36_9PROT)

HSP 1 Score: 271 bits (694), Expect = 6.500e-86
Identity = 144/335 (42.99%), Postives = 205/335 (61.19%), Query Frame = 1
Query:    7 PVALLTGFLGSGKTTLLSRMLAQGGFKDTAVIVNEFGEISIDHLVVADLAENILELRDGCLCCTIRGDLVMTLRDLNRRRYLEEIPYFSRVIVETTGLADPVPLVHTMMANAPIMTAYKLDAVICVVDGEHGLATLAQHDTAQDQVAMADILVVSKVDVAARDTLDALRARIAGINADAEVVEVAKGEIDATQLFGRSLFQPEARDEALARWMG----AAHAHHD------------HGARYGAHVIRHNGALSLAGTSVFLNRVVNEMKDDILRIKGIAAFREKGGKPAVVHAVQNKFYPVSYLTSWPDADHTSRLVFIGRNLNTARIDELFAA 963
            PV +LTGFLGSGKTTLL+ +L Q G   TAVIVNEFGEI +DHL+V    ++++ L  GCLCCT+RGD+V TL DL  +R    +PYF+R ++ETTGLADP P++H ++++  +   Y +D V+  VD  +G  TL +   A  Q A+AD L+++K D+A   ++D+L AR+A +N  A  +  A+G IDA+ LFG  LF P+ +   + RW+     AAHA HD            H AR  A  I  +  +S +  S +L+ + +   DD+LR+K I A  EK  +P V+H VQ+ F+P   L  WP  D  +R+VFI R+L    I+E F A
Sbjct:   11 PVTVLTGFLGSGKTTLLNHVLKQPGMAATAVIVNEFGEIGLDHLLVESATDDVVLLNSGCLCCTVRGDIVNTLTDLFVKRVKGRVPYFTRAVIETTGLADPAPVLHALLSDPIVAERYMIDGVVTTVDAVNGAGTLDRQIEAIKQAAIADRLIITKTDLADTASVDSLHARLAALNPGAPQLYAAQGAIDASALFGLGLFDPQTKSADVQRWLRDEAVAAHAEHDEAHDHDHHDVNRHDARIRAFCITRDKPISWSALSGWLDALASMRGDDLLRLKAIVAIAEKPDQPVVLHGVQHLFHPPVLLPRWPSEDRRTRIVFITRDLPQQAIEESFTA 345          
BLAST of mRNA_P-wetherbeei_contig9714.1.1 vs. uniprot
Match: UPI0009DB83C6 (GTP-binding protein n=1 Tax=Fodinicurvata sediminis TaxID=1121832 RepID=UPI0009DB83C6)

HSP 1 Score: 271 bits (693), Expect = 1.110e-85
Identity = 153/344 (44.48%), Postives = 208/344 (60.47%), Query Frame = 1
Query:    7 PVALLTGFLGSGKTTLLSRMLAQGGFKDTAVIVNEFGEISIDHLVVADLAENILELRDGCLCCTIRGDLVMTLRDLNRRRYLEEIPYFSRVIVETTGLADPVPLVHTMMANAPIMTAYKLDAVICVVDGEHGLATLAQHDTAQDQVAMADILVVSKVDVAARDTLDALRARIAGINADAEVVEVAKGEIDATQLFGRSLFQPEARDEALARWMG--AAHAHHDHGA----------------------RYGAHVIRHNGALSLAGTSVFLNRVVNEMKDDILRIKGIAAFREKGGKPAVVHAVQNKFYPVSYLTSWPDADHTSRLVFIGRNLNTARIDELFAAL 966
            PV++LTGFLGSGKTTLL  +L+     DTAVIVNEFGE+ +DH++VAD  E I+EL  GCLCCT+R DLV TL DL  +R   E+  FSRV++ETTGLADP P++HT+M +  +   ++LD VI V+DG +GLATL +H+ A  Q A+AD LV++K D+       AL AR+  +N  A+      GEI    LFG   +  EAR E + RW+   A    HDHG                       R  A  I     +S AG S+FL  ++     D+LR+KGI    EK  KPAV+H VQ+ F+PV ++ +WPD D ++RLVFI R+++   I++L  +L
Sbjct:    5 PVSILTGFLGSGKTTLLRHLLSCPELSDTAVIVNEFGEVGLDHVLVADSEEKIVELNSGCLCCTVRWDLVTTLDDLFTKRENGEVAAFSRVVIETTGLADPAPVLHTLMNDPKLAARFRLDGVITVIDGVNGLATLDRHEEAVKQAAVADRLVITKCDLP-EAACAALEARLTSLNPGAQRQRAIMGEIAPDDLFGAGFYALEARGEDVRRWLQEEAYRTAHDHGHGXXXXXXXXXXXXXXXVNRHDDRIRAFSIVREEPVSGAGFSLFLELLMANRGPDVLRVKGIVNIEEKPEKPAVIHGVQHLFHPVVWMEAWPDEDRSTRLVFITRDVSQQWIEKLLDSL 347          
BLAST of mRNA_P-wetherbeei_contig9714.1.1 vs. uniprot
Match: A0A154VAH7_9PROT (ATP-binding protein n=1 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154VAH7_9PROT)

HSP 1 Score: 268 bits (684), Expect = 1.850e-84
Identity = 145/348 (41.67%), Postives = 214/348 (61.49%), Query Frame = 1
Query:    7 PVALLTGFLGSGKTTLLSRMLAQGGFKDTAVIVNEFGEISIDHLVVADLAENILELRDGCLCCTIRGDLVMTLRDLNRRRYLEEIPYFSRVIVETTGLADPVPLVHTMMANAPIMTAYKLDAVICVVDGEHGLATLAQHDTAQDQVAMADILVVSKVDV-----AARDTLDALRARIAGINADAEVVEVAKGEIDATQLFGRSLFQPEARDEALARWM-----GAAHA------------------HHDHGARYGAHVIRHNGALSLAGTSVFLNRVVNEMKDDILRIKGIAAFREKGGKPAVVHAVQNKFYPVSYLTSWPDADHTSRLVFIGRNLNTARIDELFAAL 966
            PV++LTGFLGSGKTTLLS +L   G  DTAV++NEFGE+ +DHL+V   +EN++EL  GCLCCT+RGDLV TLRDL+ +R  +EIP F R+++ETTGLADP P++HT+M +  + + Y+LD V+ VVD  +G ATL  H  A  Q A+AD LV++K D+     +ARD LDAL AR+  +N  A  +   +GEI+  QLF   L+ P  +   + RW+       +HA                  H DH     A  +  +  +     S+F+  ++    +++LR+KGI    ++  +PAV+H VQ+ F+PV++L +WP  D  SR+VFI +++  + I++L   L
Sbjct:    6 PVSVLTGFLGSGKTTLLSNLLRHPGMADTAVVINEFGEVGLDHLLVEKSSENMIELSSGCLCCTVRGDLVNTLRDLHIKRAKQEIPNFKRLVIETTGLADPAPILHTLMTDPMLASYYRLDGVVTVVDAVNGEATLDNHIEAVKQAAVADRLVITKTDLVRDPASARD-LDALEARLQTLNPAAPRLHAVQGEIEPDQLFNAGLYDPTRKTADVLRWLKEEAYADSHAXXXXXXXXXXXXXPDVNRHDDH---VSAFCVVLDQPIDAMAFSLFVELLIGTRGENLLRVKGILNIADRPDQPAVIHGVQHVFHPVAWLEAWPSDDRRSRIVFITKDIPRSDIEKLLEGL 349          
BLAST of mRNA_P-wetherbeei_contig9714.1.1 vs. uniprot
Match: A0A2S6UCQ5_9PROT (Putative GTP-binding protein YjiA n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin1 TaxID=2013074 RepID=A0A2S6UCQ5_9PROT)

HSP 1 Score: 264 bits (675), Expect = 3.490e-83
Identity = 140/331 (42.30%), Postives = 207/331 (62.54%), Query Frame = 1
Query:    7 PVALLTGFLGSGKTTLLSRMLAQGGFKDTAVIVNEFGEISIDHLVVADLAENILELRDGCLCCTIRGDLVMTLRDLNRRRYLEEIPYFSRVIVETTGLADPVPLVHTMMANAPIMTAYKLDAVICVVDGEHGLATLAQHDTAQDQVAMADILVVSKVDVAARDTLDALRARIAGINADAEVVEVAKGEIDATQLFGRSLFQPEARDEALARWM-------GAAHAHHDHGARYGAHVIRH-----NGALSLAGTSVFLNRVVNEMKDDILRIKGIAAFREKGGKPAVVHAVQNKFYPVSYLTSWPDADHTSRLVFIGRNLNTARIDELFAA 963
            PV++LTGFLGSGKTT+L  +L      DTAV++NEFG++ +DH++V   +E+++ +  GCLCCTIRGDL+ TLR L RRR   E+P F R+++ETTGLADP P++HT+M++  +   Y+LD  I  VDG HGL  L +      Q A+AD L+++K D+A+RD + ALR R+A IN  A V  + +G++D   LFG  L+ P  +   +ARW+        A+H HH H        IR      +  LS    + +++ +++   + +LRIKGI    +  G P VVH VQ+ F+P + L +WPDAD  SR+V I R+LN   ++++F A
Sbjct:   14 PVSVLTGFLGSGKTTVLRHLLRDPAMADTAVVINEFGDVGLDHMLVEASSEDVVVMDSGCLCCTIRGDLIDTLRSLFRRRVKGEVPDFKRLVIETTGLADPAPILHTLMSDPLLSARYRLDGGITTVDGMHGLDQLDRQFEPVKQAAVADRLLITKTDLASRDQIAALRERLATINPAAPVHCIVQGKVDPAVLFGAGLYDPATKTPDVARWLREEAYGDDASHGHHGHDVNRHDDRIRSFCLIADEPLSWDAFADWMDALISVHGESLLRIKGILNIVDAEG-PVVVHGVQHIFHPPAMLDAWPDADRRSRIVMITRDLNREPVEQMFRA 343          
BLAST of mRNA_P-wetherbeei_contig9714.1.1 vs. uniprot
Match: A0A7C9UU03_9PROT (GTP-binding protein n=1 Tax=Magnetospirillum aberrantis SpK TaxID=908842 RepID=A0A7C9UU03_9PROT)

HSP 1 Score: 263 bits (671), Expect = 1.630e-82
Identity = 135/340 (39.71%), Postives = 207/340 (60.88%), Query Frame = 1
Query:    7 PVALLTGFLGSGKTTLLSRMLAQGGFKDTAVIVNEFGEISIDHLVVADLAENILELRDGCLCCTIRGDLVMTLRDLNRRRYLEEIPYFSRVIVETTGLADPVPLVHTMMANAPIMTAYKLDAVICVVDGEHGLATLAQHDTAQDQVAMADILVVSKVDVAARDTLDALRARIAGINADAEVVEVAKGEIDATQLFGRSLFQPEARDEALARWMGA---------------------AHAHHD---HGARYGAHVIRHNGALSLAGTSVFLNRVVNEMKDDILRIKGIAAFREKGGKPAVVHAVQNKFYPVSYLTSWPDADHTSRLVFIGRNLNTARIDEL 954
            PV +LTGFLGSGKTTLL+ +L+     +TAV++NEFG + +DHL+V  +AE+I+ L+ GCLCCT+RGD+V  LRDL  +R   E+P F+RV++ETTGLADP P++HT+M +  + + Y+LD ++  +D  +G ATL  HD A  Q AMAD L+++K D+A    ++ L AR+ G+N  A ++ V  G ++   +    LF    +   + +W+ A                     +H HHD   H +R  A V   + A+S    +  L  ++++  +++LRIKGI   RE   +P  +H VQ+ F+P + L  WPD DH++R+VFI R+L+ A I E+
Sbjct:    6 PVTVLTGFLGSGKTTLLNHLLSHPDMGETAVLINEFGAVGLDHLLVQHVAEDIVLLQSGCLCCTVRGDMVNALRDLFLKRVKGEVPEFTRVVIETTGLADPAPIIHTLMTDPLLSSRYRLDGIVTTIDAANGAATLDNHDEAVKQAAMADRLLLTKTDIADYTAVEVLHARLRGLNPAAPLIRVVNGAVEPKDILDAGLFNDTDKIPDVHKWLNAEAYADLRRERDRKMGLDPDDHSHHHHDINRHDSRVQAFVFTRDEAVSWPALAFALELLISQRGENLLRIKGIVNARESA-QPLAIHGVQHVFHPPAPLPGWPDDDHSTRIVFITRDLDRAVIGEM 344          
BLAST of mRNA_P-wetherbeei_contig9714.1.1 vs. uniprot
Match: A0A346QX00_9HYPH (GTP-binding protein n=1 Tax=Breoghania sp. L-A4 TaxID=2304600 RepID=A0A346QX00_9HYPH)

HSP 1 Score: 264 bits (674), Expect = 1.650e-82
Identity = 149/345 (43.19%), Postives = 204/345 (59.13%), Query Frame = 1
Query:    7 PVALLTGFLGSGKTTLLSRMLAQGGFKDTAVIVNEFGEISIDHLVVADLAENILELRDGCLCCTIRGDLVMTLRDLNRRRYLEEIPYFSRVIVETTGLADPVPLVHTMMANAPIMTAYKLDAVICVVDGEHGLATLAQHDTAQDQVAMADILVVSKVDVAARDT----LDALRARIAGINADAEVVEVAKGEIDATQLFGRSLFQPEARDEALARWMG-------AAHAHHDHGA-------------RYGAHV----IRHNGALSLAGTSVFLNRVVNEMKDDILRIKGIAAFREKGGKPAVVHAVQNKFYPVSYLTSWPDADHTSRLVFIGRNLNTARIDELF 957
            P+++LTGFLGSGKTTLL+R+L      DTAVIVNEFG++ +DHL+VA   E ++EL  GCLCCTIRGDLV TL DL RR     I    RV++ETTGLADP P++HT+M +  ++  Y+LD VI  VD  +G ATL  H+ A  Q+A+AD +V++K D+   DT    L +LR RIA +N  A V+  A+GE+ A  L    L+ PE +   +A W+        A H HH H               R+  H+    +     +S+AG  +FL+ + +     +LR+KGI    E   +P V+H VQ+ F+P + L  WPD DH SRLVFI R+L    +  LF
Sbjct:   16 PLSVLTGFLGSGKTTLLNRLLCDPALADTAVIVNEFGDVGLDHLLVAQADEGVIELSSGCLCCTIRGDLVNTLEDLLRRIDNGRIKALKRVVIETTGLADPAPVLHTVMLHPYLLMRYRLDGVITTVDAINGAATLDAHEEAVKQLAVADRIVLTKTDLVETDTQKDALRSLRGRIAALNPGAIVLNAAEGEVTAAALLNCGLYDPETKIADVAGWLRDEAYRDPAHHGHHAHEXXXXXXXXXXXXVNRHDEHIRAFTLTAERPISVAGLEMFLDLLRSAHGPKLLRVKGIVQIAEDPERPVVIHGVQHVFHPPATLERWPDDDHRSRLVFITRDLPEGFVKSLF 360          
BLAST of mRNA_P-wetherbeei_contig9714.1.1 vs. uniprot
Match: UPI00193BD783 (GTP-binding protein n=1 Tax=Azospira restricta TaxID=404405 RepID=UPI00193BD783)

HSP 1 Score: 262 bits (670), Expect = 1.860e-82
Identity = 146/333 (43.84%), Postives = 204/333 (61.26%), Query Frame = 1
Query:    7 PVALLTGFLGSGKTTLLSRMLAQGGFKDTAVIVNEFGEISIDHLVVADLAENILELRDGCLCCTIRGDLVMTLRDLNRRRYLEEIPYFSRVIVETTGLADPVPLVHTMMANAPIMTAYKLDAVICVVDGEHGLATLAQHDTAQDQVAMADILVVSKVDVAARDTLDALRARIAGINADAEVVEVAKGEIDATQLFGRSLFQPEARDEALARWMG--------AAHAH-HD---HGARYGAHVIRHNGALSLAGTSVFLNRVVNEMKDDILRIKGIAAFREKGGKPAVVHAVQNKFYPVSYLTSWPDADHTSRLVFIGRNLNTARIDELFAALC 969
            PV +LTGFLG+GKTTLL+ +L Q    DTAV++NEFGEI IDHL+V  + +N++ L  GCLCC++RGDL   LRDL  RR   EIP FSRVIVETTGLADP P+++T++ +  I   ++ D ++  V   H  A LAQH  A  Q AMAD L+++K D+A  DT+  +RAR+A +N  A ++EV +GE+ A  L G  L+ P  +   + RW+         AA AH HD   H AR  + V+R     +    +  ++ +++   D ILR+KG+     +   P VVH VQ+  YP S L +WPD DH SRLVFI R+ +   +++ F   C
Sbjct:   11 PVTVLTGFLGAGKTTLLNHLLKQPAMADTAVLINEFGEIGIDHLLVEKVDDNLVLLDSGCLCCSVRGDLARALRDLFMRRLRREIPAFSRVIVETTGLADPAPVIYTLLEDFFIAERFRSDGIVAAVAATHAEAQLAQHAEAAKQAAMADRLLLTKCDLADADTIVRVRARLAALNPGAPLLEVRRGEVAADALAGGGLYDPATKSADVRRWLAEEAVHAAAAAGAHRHDPQRHDARVHSFVLRFAEPFAWGEFAEAIDVLLSTCGDRILRVKGLVNVAGETA-PRVVHCVQHVRYPESALPAWPDDDHASRLVFIVRDFSREYVEKAFTIFC 342          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9714.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0004DFA9FF1.520e-9044.15GTP-binding protein n=1 Tax=Thiomonas sp. FB-Cd Ta... [more]
UPI00047A870A5.360e-8644.19GTP-binding protein n=1 Tax=Fodinicurvata fenggang... [more]
A0A257DEL3_9BURK5.710e-8645.35GTP-binding protein n=1 Tax=Burkholderiales bacter... [more]
A0A537UV36_9PROT6.500e-8642.99GTP-binding protein n=4 Tax=unclassified Alphaprot... [more]
UPI0009DB83C61.110e-8544.48GTP-binding protein n=1 Tax=Fodinicurvata sedimini... [more]
A0A154VAH7_9PROT1.850e-8441.67ATP-binding protein n=1 Tax=Oceanibaculum pacificu... [more]
A0A2S6UCQ5_9PROT3.490e-8342.30Putative GTP-binding protein YjiA n=1 Tax=Alphapro... [more]
A0A7C9UU03_9PROT1.630e-8239.71GTP-binding protein n=1 Tax=Magnetospirillum aberr... [more]
A0A346QX00_9HYPH1.650e-8243.19GTP-binding protein n=1 Tax=Breoghania sp. L-A4 Ta... [more]
UPI00193BD7831.860e-8243.84GTP-binding protein n=1 Tax=Azospira restricta Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9714contigP-wetherbeei_contig9714:598..1572 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1158292.JPOE01000002_gene2322
Preferred nameyjiA_2
PFAMsCobW_C,cobW
Model size975
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorymitochondrion
Exons1
Evalue2.49e-91
EggNOG OGsCOG0523@1|root,COG0523@2|Bacteria,1MVZV@1224|Proteobacteria,2VIHH@28216|Betaproteobacteria,1KK5M@119065|unclassified Burkholderiales
DescriptionCobalamin synthesis protein
Cds size975
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187106.9690208-CDS-P-wetherbeei_contig9714:597..15721683187106.9690208-CDS-P-wetherbeei_contig9714:597..1572Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9714 598..1572 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9714.1.1prot_P-wetherbeei_contig9714.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9714 598..1572 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9714.1.1

>prot_P-wetherbeei_contig9714.1.1 ID=prot_P-wetherbeei_contig9714.1.1|Name=mRNA_P-wetherbeei_contig9714.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=325bp
KTPVALLTGFLGSGKTTLLSRMLAQGGFKDTAVIVNEFGEISIDHLVVAD
LAENILELRDGCLCCTIRGDLVMTLRDLNRRRYLEEIPYFSRVIVETTGL
ADPVPLVHTMMANAPIMTAYKLDAVICVVDGEHGLATLAQHDTAQDQVAM
ADILVVSKVDVAARDTLDALRARIAGINADAEVVEVAKGEIDATQLFGRS
LFQPEARDEALARWMGAAHAHHDHGARYGAHVIRHNGALSLAGTSVFLNR
VVNEMKDDILRIKGIAAFREKGGKPAVVHAVQNKFYPVSYLTSWPDADHT
SRLVFIGRNLNTARIDELFAALCV*
back to top

mRNA from alignment at P-wetherbeei_contig9714:598..1572-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9714.1.1 ID=mRNA_P-wetherbeei_contig9714.1.1|Name=mRNA_P-wetherbeei_contig9714.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=975bp|location=Sequence derived from alignment at P-wetherbeei_contig9714:598..1572- (Phaeothamnion wetherbeei SAG_119_79)
AAGACACCGGTCGCACTGTTGACCGGCTTCCTCGGCAGCGGCAAGACCAC GCTCTTGTCGCGGATGCTGGCGCAGGGCGGATTCAAAGACACCGCCGTCA TTGTCAACGAGTTCGGCGAAATCAGTATCGATCACCTGGTGGTGGCGGAT CTGGCCGAGAACATCCTTGAACTGCGCGACGGCTGCTTGTGTTGCACCAT ACGCGGCGATCTGGTGATGACCTTGCGCGATCTGAATCGACGCCGTTACC TCGAAGAGATCCCATACTTCAGTCGCGTGATAGTCGAAACCACCGGGCTT GCCGATCCGGTGCCGCTGGTGCACACCATGATGGCCAACGCGCCCATCAT GACCGCCTACAAGCTCGACGCCGTGATCTGTGTGGTGGACGGCGAGCATG GGCTGGCCACGCTCGCCCAGCACGACACCGCGCAGGATCAGGTGGCGATG GCCGATATCCTGGTGGTGAGCAAGGTTGATGTCGCCGCACGTGACACTCT GGATGCCCTGCGTGCGCGCATTGCCGGCATTAATGCTGATGCGGAAGTGG TCGAGGTTGCCAAGGGTGAAATCGACGCCACGCAGTTATTCGGGCGCTCG CTGTTTCAGCCCGAGGCGCGCGACGAGGCGCTCGCCCGTTGGATGGGCGC GGCTCATGCGCATCACGACCATGGTGCACGCTATGGGGCTCACGTCATAC GCCACAATGGCGCGCTGAGCCTGGCGGGTACCAGCGTCTTTCTCAATCGC GTCGTCAACGAAATGAAGGACGACATATTGCGCATCAAGGGTATCGCCGC GTTTCGCGAGAAGGGCGGCAAACCGGCGGTAGTGCACGCGGTGCAGAACA AGTTTTATCCGGTCAGCTACCTCACGAGTTGGCCGGACGCGGACCACACC AGTCGACTGGTCTTCATTGGACGCAATCTGAATACCGCCCGCATCGACGA ATTATTCGCAGCCCTGTGTGTCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig9714:598..1572-

>mRNA_P-wetherbeei_contig9714.1.1 ID=mRNA_P-wetherbeei_contig9714.1.1|Name=mRNA_P-wetherbeei_contig9714.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=975bp|location=Sequence derived from alignment at P-wetherbeei_contig9714:598..1572- (Phaeothamnion wetherbeei SAG_119_79)
AAGACACCGGTCGCACTGTTGACCGGCTTCCTCGGCAGCGGCAAGACCAC
GCTCTTGTCGCGGATGCTGGCGCAGGGCGGATTCAAAGACACCGCCGTCA
TTGTCAACGAGTTCGGCGAAATCAGTATCGATCACCTGGTGGTGGCGGAT
CTGGCCGAGAACATCCTTGAACTGCGCGACGGCTGCTTGTGTTGCACCAT
ACGCGGCGATCTGGTGATGACCTTGCGCGATCTGAATCGACGCCGTTACC
TCGAAGAGATCCCATACTTCAGTCGCGTGATAGTCGAAACCACCGGGCTT
GCCGATCCGGTGCCGCTGGTGCACACCATGATGGCCAACGCGCCCATCAT
GACCGCCTACAAGCTCGACGCCGTGATCTGTGTGGTGGACGGCGAGCATG
GGCTGGCCACGCTCGCCCAGCACGACACCGCGCAGGATCAGGTGGCGATG
GCCGATATCCTGGTGGTGAGCAAGGTTGATGTCGCCGCACGTGACACTCT
GGATGCCCTGCGTGCGCGCATTGCCGGCATTAATGCTGATGCGGAAGTGG
TCGAGGTTGCCAAGGGTGAAATCGACGCCACGCAGTTATTCGGGCGCTCG
CTGTTTCAGCCCGAGGCGCGCGACGAGGCGCTCGCCCGTTGGATGGGCGC
GGCTCATGCGCATCACGACCATGGTGCACGCTATGGGGCTCACGTCATAC
GCCACAATGGCGCGCTGAGCCTGGCGGGTACCAGCGTCTTTCTCAATCGC
GTCGTCAACGAAATGAAGGACGACATATTGCGCATCAAGGGTATCGCCGC
GTTTCGCGAGAAGGGCGGCAAACCGGCGGTAGTGCACGCGGTGCAGAACA
AGTTTTATCCGGTCAGCTACCTCACGAGTTGGCCGGACGCGGACCACACC
AGTCGACTGGTCTTCATTGGACGCAATCTGAATACCGCCCGCATCGACGA
ATTATTCGCAGCCCTGTGTGTCTGA
back to top