mRNA_P-wetherbeei_contig971.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig971.1.2 vs. uniprot
Match: D8LF07_ECTSI (SGT1 homologue n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF07_ECTSI) HSP 1 Score: 194 bits (493), Expect = 1.430e-51 Identity = 132/337 (39.17%), Postives = 187/337 (55.49%), Query Frame = 1 Query: 31 AYVAEDYPSAITLYGKVIEAEPSSH-LPYLNRCAALLKLRRAAEALEDAEAALRLEPECELALYRKGLACFELERFVPARDAFRSGQQ-RYAAASEHDPRRYPTWLRKCEAEIGLSDTEVSETAD---------------------PAAKPAAVAANRPAPQLKAAAAAAPPSTHLQTRFQYYQSSEKLTVGILVKGVKAEEATVEVEPRRVRLW-SGGKESPTLLFDKLLHDEVVPAECKTRFLASKVEIVLKKKSPFEWPDL--GALPPGPGAAPASAXXXXXXXXXXXXXXXXXXXXATKEKKP----RPYSSHRDWDTIEKEVERELSSEKPG 951 A++ EDYP+ + YG+ I L NR A LKL + EAL+DA AA++L P E+A YRKGLA F LE F A +AFR G++ +DPR+Y TW+RKCEAE+ + + P + + AA P + A++ P+ HL+ +FQYYQS EK+TV +L KG+K E V+VE +R+ + G + LLFDK+L++EV+P +C+TRF+ASK+E+ + KKSP +WP+L A+P AA A+A A E+ P RPYSS +DWD +EKEV++EL +EKPG Sbjct: 14 AFIDEDYPATLQAYGEAISLGGEGEALARSNRAAVYLKLSKHTEALQDASAAVKLMPT-EMAFYRKGLAAFALEEFETALEAFRQGKKLEEERGDSNDPRKYRTWVRKCEAELEAEEEAHAXXXXXXXXXXXXXXXXXXXXXXDVAPVSGGSVGAAAAPVKRTPVPASSTAPA-HLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKAGDNAGALLFDKVLYEEVLPEKCRTRFMASKLEVTMTKKSPADWPELEGAAIPAARPAAAATATDASSTSGE-----------AAVEQPPTKVARPYSSTKDWDVVEKEVQKELEAEKPG 337
BLAST of mRNA_P-wetherbeei_contig971.1.2 vs. uniprot
Match: A0A835ZF73_9STRA (SGS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF73_9STRA) HSP 1 Score: 181 bits (459), Expect = 4.340e-47 Identity = 126/341 (36.95%), Postives = 181/341 (53.08%), Query Frame = 1 Query: 13 VAAADAAYVAEDYPSAITLYGKVIEAEPSSHLPYLNRCAALLKLRRAAEALEDAEAALRLEPECELALYRKGLACFELERFVPARDAFRSGQQRYAAASEH--------------DPRRYPTWLRKCEAEIGLSDTEVSETADPAAKPAAVAANRPAPQLKAAAAAAPPSTHLQTRFQYYQSSEKLTVGILVKGVKAEEATVEVEPRRVRLWSGGKESPTLLFDKLLHDEVVPAECKTRFLASKVEIVLKKKSPFEWPDLGA-------LPPGPGAAPASAXXXXXXXXXXXXXXXXXXXXATKEKKPRPYSSHRDWDTIEKEVERELSSEKP-GESERNE 969 +A +AA+V +D+ A+ LY + +EA+ Y R AA LKLRR A+AL+DA+ AL+L P E ALYR+G+ACF L+++ A +AF +G+ AA + D R+Y TW+RKC AE+ +D A PP ++QYYQ+++K+TVGIL K V+ +A V++ R+R+ S +LFDK L D+VV AEC+TRFLASK+E LKK+ WP L + P P A A+A ++EK P+PY+SHRDWD I++++ +EL +EKP GE NE Sbjct: 4 LAQGNAAFVDDDFARAVQLYTQAVEADAGLADAYAARAAAHLKLRRHADALQDADGALKLRPGLEPALYRRGVACFSLDKYAEALEAFTAGK---AAQGDRPAGKLPFVCRVRTDDSRKYSTWIRKCNAELEAADATXXXXXXXXXXXXXXXXXXXXXXXXXPPALVPP------KYQYYQTADKVTVGILEKNVREGDAVVDISEDRLRV---ALTSGRVLFDKQLFDKVVVAECRTRFLASKIECTLKKQDAHNWPQLEGSGKPQKVIKPPPVAEAAAAEAAPAGAE-------------SQEKPPKPYASHRDWDAIDRDISKELEAEKPEGEEALNE 319
BLAST of mRNA_P-wetherbeei_contig971.1.2 vs. uniprot
Match: A0A6H5K5R7_9PHAE (CS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R7_9PHAE) HSP 1 Score: 157 bits (398), Expect = 5.090e-40 Identity = 103/257 (40.08%), Postives = 144/257 (56.03%), Query Frame = 1 Query: 31 AYVAEDYPSAITLYGKVIEAEPSSH-LPYLNRCAALLKLRRAAEALEDAEAALRLEPECELALYRKGLACFELERFVPARDAFRSGQQRYAAASEHDPRRYPTWLRKCEAEIGLSDTEV------------------SETADPAAKPAAVAANRPAPQLKAAAAAAPPSTHLQTRFQYYQSSEKLTVGILVKGVKAEEATVEVEPRRVRLW-SGGKESPTLLFDKLLHDEVVPAECKTRFLASKVEIVLKKKSPFEW 741 A++ EDYP+ + YG+ I L NR A LKL + EAL+DA AA++L P E+A YRKGLA F LE F A +AFR G++ DPR+Y TW+RKCEAE+ + S+ A P + + AA P + A++ P+ HL+ +FQYYQS EK+TV +L KG+K E V+VEP+R+ + G + LLFDK+L++EV+P +C+TRF+ASK PF W Sbjct: 14 AFIDEDYPATLQAYGEAISLGGEGEALARSNRAAVYLKLGKHTEALQDASAAVKLMPT-EMAFYRKGLAAFALEEFETALEAFRQGKKLEERGDSSDPRKYRTWIRKCEAELEAEEXXXXXXXXXXXXXXXXXXXXXSDIA-PVSGGSVGAAATPVKRTPVLASSTAPA-HLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEPKRLTVKRKAGDNAGALLFDKVLYEEVLPEKCRTRFMASKA-------GPFAW 260
BLAST of mRNA_P-wetherbeei_contig971.1.2 vs. uniprot
Match: W7U5K4_9STRA (Suppressor of g2 allele of skp1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5K4_9STRA) HSP 1 Score: 156 bits (395), Expect = 3.170e-38 Identity = 115/323 (35.60%), Postives = 169/323 (52.32%), Query Frame = 1 Query: 22 ADAAYVAEDYPSAITLYGKVIEAEPSSHLPYLNRCAALLKLRRAAEALEDAEAALRLEPECELALYRKGLACFELERFVPARDAFRSGQQRYAAASEHDPRRYPTWLRKCEAEIGLSD----TEVSETA------DPAAK--PAAVAANRPAPQLKAAAAAAPPSTHLQTRFQYYQSSEKLTVGILVKGVKAEEATVEVEPRRVRLWSGGKESPTLLFDKLLHDEVVPAECKTRFLASKVEIVLKKKSP-FEWPDLGALPPGPGAAPASAXXXXXXXXXXXXXXXXXXXXATKEKKP-RPYSSHRDWDTIEKEVERELSSEKP 948 A A++ EDY +A L+ I P ++R A LKL + ++AL DAEAA L+ + E+A YR+G+A F LE F A++AF G+ E RRY WLRK E+G D T V+E + AK A V ++P+P ++A A P+ H+ +FQ+YQ++ +TV IL KG++ E+A V V+PR +++ G LFD+ L + VVP E ++ A+KVE+ L+K WP+L AL P A+ + KP RPY+S +DW +EKE+ +EL SEKP Sbjct: 4 AQLAFMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHV--KFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGA--DGDALFDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPLRPYASTKDWGAVEKEISKELESEKP 322
BLAST of mRNA_P-wetherbeei_contig971.1.2 vs. uniprot
Match: A0A7S2SS77_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS77_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.140e-33 Identity = 118/333 (35.44%), Postives = 167/333 (50.15%), Query Frame = 1 Query: 13 VAAADAAYVAEDYPSAITLYGKVIEAEPSSHLPYLNRCAALLKLRRAAEALEDAEAALRLEPECELALYRKGLACFELERFVPARDAFRSGQQRYAAASEHDPR--RYPTWLRKCEAEIGLSDTEV---SETADPAAKPAAVAANRPAPQLKAAAAAAPPSTHLQTRFQYYQSSEKLTVGILVKGVKAEEATVEVEPRR--VRLWSGGKESPTLLFDKLLHDEVVPAECKTRFLASKVEIVLKKKSPFEWPDL---GA---LPPGPGAAPASAXXXXXXXXXXXXXXXXXXXXATKEKKPRPYSSHRDWDTIEKEVERELSSEKP-GESERNE 969 +AAA + +D+ A+ + +E EP + R AL KL R EAL+DA A+ L+ CE+A +RKG ACFELE + A AF GQ ++ + +PR Y W+RKCE EI + E+ + A +PAA AA P AAPP + ++Q+YQ++ + V I+ K +K +E +VE+E R VR+ G E +L L D VVPAE L++KVEI LKK F+W DL GA + P ++ ASA PY+S RDW+ ++K ++ EL EKP GE NE Sbjct: 24 LAAASDLILDDDFEGAVEQFTLALEIEPGMIRAFTGRSTALQKLGRHTEALQDANKAIALDGSCEVAFFRKGTACFELEEYETALAAFTKGQSLLKSSGKAEPRGRNYDRWIRKCETEIEDDEDELVPENMVGSGAGEPAAAAAADVQPP------AAPPRPSI--KYQHYQTAGHVVVAIMEKKLKKDEVSVEIEDRVCVVRISREGSEPASLTLH--LWDSVVPAESSFVVLSTKVEIKLKKVGDFQWDDLVNSGAARVVTAVPSSSAASAT---------------------------PYASKRDWNQVDKAMQEELEKEKPEGEEALNE 319
BLAST of mRNA_P-wetherbeei_contig971.1.2 vs. uniprot
Match: F0WJK5_9STRA (Uncharacterized protein AlNc14C123G6730 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJK5_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.240e-32 Identity = 101/311 (32.48%), Postives = 158/311 (50.80%), Query Frame = 1 Query: 25 DAAYVAEDYPSAITLYGKVIEAEPSSHLPYLNRCAALLKLRRAAEALEDAEAALRLEPECELALYRKGLACFELERFVPARDAFRSGQQRYAAASEHDPRRYPTWLRKCEAEIGLSDTEVSETADPAAKPAAVAANRPAP-QLKAAAAAAPPSTHLQTRFQYYQSSEKLTVGILVKGVKAEEATVEVEPRRVRLWSGGKESPTLLFDKLLHDEVVPAECKTRFLASKVEIVLKKKSPFEWPDLGALPPGPGAAPASAXXXXXXXXXXXXXXXXXXXXATKEKK--PRPYSSHRDWDTIEKEVERELSSEKP 948 +A +V E Y AI Y K + + + R A +KL + +A DA+ A+ L+ +A RKG+ACFE+ER+ A+D F GQQ AS + TW+RKC+AE+ D E AD A + +N+ A +L+A +P + R ++YQS+ +T+ IL K ++ E+ +VE+ + VR+ + + FD+ L DE++ +E + L +KVEI LKKK+ + W L +P A E K P+PYS +RDW+ I+KE+ +EL +EKP Sbjct: 8 NALFVDEQYNEAIAAYTKSLTSNDKDADTFAKRAAVHIKLEKWEDARSDADHAIALDATLAVAYLRKGIACFEMERYKEAKDTFMCGQQIVTTASNQQHLPFSTWIRKCDAELQDKD----EFADDAMQSENKTSNKEAATKLQADTLVSP-----RIRHEWYQSNSHVTISILQKQLQPEQVSVEIGVKEVRVIIRLFDQTVVAFDQKLCDEIIESESAWKVLGTKVEIKLKKKTNYIWQQLEEVP--------------------RQSSSNRTPDANSETKAAPKPYSGNRDWEQIDKEIRKELENEKP 289
BLAST of mRNA_P-wetherbeei_contig971.1.2 vs. uniprot
Match: A0A024G272_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G272_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.350e-32 Identity = 100/312 (32.05%), Postives = 153/312 (49.04%), Query Frame = 1 Query: 25 DAAYVAEDYPSAITLYGKVIEAEPSSHLPYLNRCAALLKLRRAAEALEDAEAALRLEPECELALYRKGLACFELERFVPARDAFRSGQQRYAAASEHDPRRYPTWLRKCEAEIG----LSDTEVSETADPAAKPAAVAANRPAPQLKAAAAAAPPSTHLQTRFQYYQSSEKLTVGILVKGVKAEEATVEVEPRRVRLWSGGKESPTLLFDKLLHDEVVPAECKTRFLASKVEIVLKKKSPFEWPDLGALPPGPGAAPASAXXXXXXXXXXXXXXXXXXXXATKEKKPRPYSSHRDWDTIEKEVERELSSEKP 948 +A +V E + A+ Y K +E + R A LKL + EA DA+ A+ L+ +A RKG+ACFELER+ A+D F GQQ + A + + TW+RKC+ EI D +K AA+++ + A A AP + R ++YQS+ ++TV IL K ++ E+ +V+V + VR+ + FD+ L DEVV +E + L +KVEI LKKK+ + W L +P + P+PYSS RDW I+K++++EL +EKP Sbjct: 8 NALFVDEQFNEALAAYSKSLEENDMDADTFSKRAAVYLKLTKWEEARSDADHAIALDVALSIAYLRKGIACFELERYEEAKDTFLCGQQTLSGAPDEYQLPFLTWIRKCDTEIQDGDVFPDNSAKSETGATSKEAAISSKKDA-------AVAP-----RVRHEWYQSNSQVTVSILQKKLQPEQVSVDVGVKEVRVIIRLANETIVAFDQKLFDEVVESESTWKVLGTKVEIKLKKKNNYIWQQLEEMP-------------------NQLSSHLPDTLCETKAAPQPYSSKRDWGQIDKQIQKELENEKP 288
BLAST of mRNA_P-wetherbeei_contig971.1.2 vs. uniprot
Match: F0Y0A7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0A7_AURAN) HSP 1 Score: 136 bits (343), Expect = 1.790e-31 Identity = 107/324 (33.02%), Postives = 151/324 (46.60%), Query Frame = 1 Query: 13 VAAADAAYVAEDYPSAITLYGKVIEAEPSSHLPYLNRCAALLKLRRAAEALEDAEAALRLEPECELALYRKGLACFELERFVPARDAFRSGQQRYAA-ASEHDPRRYPTWLRKCEAEIGLSDTEVSETADPAAKPAAVAANRPAPQLKAAAAAAPPSTHLQTRFQYYQSSEKLTVGILVKGVKAEEATVEVEPRRV--RLWSGGKESPTLLFDKLLHDEVVPAECKTRFLASKVEIVLKKKSPFEWPDL--GAL-------PPGPGAAPASAXXXXXXXXXXXXXXXXXXXXATKEKKPRPYSSHRDWDTIEKEVERELSSEKP 948 +AAA+ E Y +A+ YG I+ + Y R A L+L + AL+DA AAL + CE ALYRKGLACF L+ F A D+F+ G + A A+ R+Y W RKCEAEI + + P ++QYYQ++ LT+ +L K VK E+A + + + +L G +S + L+D VVPAECK ++ ++K+++ LKKK F W +L G L PP APAS AT PY+ RDW +EKE+E EL +KP Sbjct: 3 LAAANQLLCDELYDAALVAYGSAIDGDDKCAAAYAGRAAIYLRLEKYTNALQDANAALAEDGACEPALYRKGLACFHLDEFETALDSFQKGFKLLGADAAAAATRKYAMWARKCEAEIXXXXXXXXXXXXX--------------DVPSGVKVVP----CDVKYQYYQTNSHLTITLLAKNVKEEDAEIVITETTLICKLKRDGGKSEMTVISGELYDPVVPAECKVKYFSTKIDVKLKKKDAFNWNELLKGDLIGEPKKKPPTFKPAPASTTST-----------------AT------PYAGKRDWHQLEKEMEAELEKDKP 285
BLAST of mRNA_P-wetherbeei_contig971.1.2 vs. uniprot
Match: A0A7S2BLI2_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BLI2_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.120e-31 Identity = 81/240 (33.75%), Postives = 129/240 (53.75%), Query Frame = 1 Query: 37 VAEDYPSAITLYGKVIEAEPSSHLPYLNRCAALLKLRRAAEALEDAEAALRLEPECELALYRKGLACFELERFVPARDAFRSGQQRYAAASEHDPRRYPTWLRKCEAEIGLSDTEVSETADPAAKPAAVAANRPAPQLKAAAAAAPPSTHLQTRFQYYQSSEKLTVGILVKGVKAEEATVEVEPRRVRLWSGGKESPTLLFDKLLHDEVVPAECKTRFLASKVEIVLKKKSPFEWPDLGA 756 V +D+ A+ + +E + +S R A +KL + AL+DA AA++L+ +CE+A +RKG+ACF L+ F A DAFR G+ D R Y W+RKCE+EI D + + A PAAVA+ P + A P + ++Q+YQS+ LTV I+ K +K EE V++ + +++ + D L++ + P++ + + +KVEI LKK +WPDL A Sbjct: 21 VDDDFEGALESFSAALELDANSVKALTGRAATFIKLEKYTSALQDANAAVKLDEKCEVAYFRKGMACFALDEFETALDAFRKGKDLQPPGK--DSRSYGRWIRKCESEIESDDDVIDMETEDGASPAAVAS----PPIPAPMQPVQPPEEKKLKYQHYQSASLLTVSIMEKKLKPEEVAVDISEKHLKVTVARPNVEPICMDVDLYEFIDPSQSSFKIMGTKVEIKLKKVEGIQWPDLKA 254
BLAST of mRNA_P-wetherbeei_contig971.1.2 vs. uniprot
Match: A0A7S1FSN7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FSN7_9STRA) HSP 1 Score: 128 bits (322), Expect = 2.970e-30 Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 2 Query: 1283 TEGEEALNDLFKQIYRGADEDTRRAMVKSFQTSGGTVLSTNWGEVGKADYEKERTAPHGMEWRNWEGEKVAQADDSN 1513 +EGEEALN LF+QIY GA+EDTRRAMVKSFQTSGGTVLSTNW EVGK DYE+ER AP GMEWR WEG+K+ Q D + Sbjct: 131 SEGEEALNRLFRQIYAGANEDTRRAMVKSFQTSGGTVLSTNWDEVGKTDYERERQAPKGMEWRTWEGQKLPQKKDED 207 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig971.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig971.1.2 >prot_P-wetherbeei_contig971.1.2 ID=prot_P-wetherbeei_contig971.1.2|Name=mRNA_P-wetherbeei_contig971.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=352bp MAATVAAADAAYVAEDYPSAITLYGKVIEAEPSSHLPYLNRCAALLKLRRback to top mRNA from alignment at P-wetherbeei_contig971:519..2945- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig971.1.2 ID=mRNA_P-wetherbeei_contig971.1.2|Name=mRNA_P-wetherbeei_contig971.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2427bp|location=Sequence derived from alignment at P-wetherbeei_contig971:519..2945- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig971:519..2945- >mRNA_P-wetherbeei_contig971.1.2 ID=mRNA_P-wetherbeei_contig971.1.2|Name=mRNA_P-wetherbeei_contig971.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1056bp|location=Sequence derived from alignment at P-wetherbeei_contig971:519..2945- (Phaeothamnion wetherbeei SAG_119_79)back to top |