mRNA_P-wetherbeei_contig9701.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9701.1.1
Unique NamemRNA_P-wetherbeei_contig9701.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9701.1.1 vs. uniprot
Match: A0A835ZDK7_9STRA (Spermidine/spermine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK7_9STRA)

HSP 1 Score: 393 bits (1010), Expect = 3.840e-136
Identity = 188/243 (77.37%), Postives = 216/243 (88.89%), Query Frame = 1
Query:    1 QVLVLDGVIQVTERDEFSYQEMLTHIPCFAHPCPKRVLIVGGGDGGILREVARHSCVDAIDMCEIDPVVCEVSKRFEFSTATAFADPRLNLVHEDAAEFVKRDGNGNYDVIIVDSSDPVGPAETLFQPAFYEHMRASLAPGGVVATQGECMWLHLPLIKTVLTSCAGSFAAVDYAFTTIPTYPCGQIGFVLGSNSPSRDLSVPVREPSAEMAEHLRYYSSAVHRAAFVLPAFAEKEIRGARRR 729
            +VLVLDGVIQVTERDEF+YQEMLTHIPCFAHP PKRVLIVGGGDGGILREVARH+CV+ IDMCEIDP+VC+VSK+FEFSTATAF DPRL LVHEDAAEFVKR+GNG YDVIIVDSSDPVGPAETLF+P F+  M+ +L+PGG+VATQGEC+WLHL LI+ VL SCA +F +++YAFTT+PTYP GQIGFV+GS +  RDLS P REP A MA+ LRYYS AVHR+AFVLPAFAE+E+   R+R
Sbjct:   48 KVLVLDGVIQVTERDEFAYQEMLTHIPCFAHPHPKRVLIVGGGDGGILREVARHACVENIDMCEIDPMVCDVSKKFEFSTATAFGDPRLRLVHEDAAEFVKREGNGQYDVIIVDSSDPVGPAETLFKPEFFLSMKNALSPGGIVATQGECLWLHLKLIRGVLESCASTFTSLEYAFTTMPTYPSGQIGFVVGSTA-ERDLSTPAREPDAAMAQDLRYYSPAVHRSAFVLPAFAEREVSAVRKR 289          
BLAST of mRNA_P-wetherbeei_contig9701.1.1 vs. uniprot
Match: A0A6H5K487_9PHAE (SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K487_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 1.300e-125
Identity = 182/243 (74.90%), Postives = 203/243 (83.54%), Query Frame = 1
Query:    1 QVLVLDGVIQVTERDEFSYQEMLTHIPCFAHPCPKRVLIVGGGDGGILREVARHSCVDAIDMCEIDPVVCEVSKRFEFSTATAFADPRLNLVHEDAAEFVKRDGNGNYDVIIVDSSDPVGPAETLFQPAFYEHMRASLAPGGVVATQGECMWLHLPLIKTVLTSCAGSFAAVDYAFTTIPTYPCGQIGFVLGSNSPSRDLSVPVREPSAEMAEHLRYYSSAVHRAAFVLPAFAEKEIRGARRR 729
            +VLVLDGVIQ+TERDE SYQEMLTHIPCFA   PK+VLIVGGGDGG+LREVARH  V+ I MCEID VVCEVS+RFEF TA+AF D RL LVHEDAAEFVK++GN  YDVIIVDSSDPVGPAETLFQP+FY++M+ +LAP GV+ATQGEC+WLHLPLI TVL +CA  F +VDYAFTT+P+YP GQIGFVL S    RDLS P   P+A M E LRYYS  VHRAAFVLP FAEKEI G RRR
Sbjct:   48 KVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSVVCEVSRRFEFCTASAFGDARLKLVHEDAAEFVKKEGNSGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVE-ERDLSTPASTPNAAMTEVLRYYSPEVHRAAFVLPVFAEKEIAGVRRR 289          
BLAST of mRNA_P-wetherbeei_contig9701.1.1 vs. uniprot
Match: A0A7S0J2H0_9EUKA (Hypothetical protein n=2 Tax=Coccolithales TaxID=418917 RepID=A0A7S0J2H0_9EUKA)

HSP 1 Score: 319 bits (817), Expect = 5.720e-106
Identity = 159/242 (65.70%), Postives = 186/242 (76.86%), Query Frame = 1
Query:    4 VLVLDGVIQVTERDEFSYQEMLTHIPCFAHPCPKRVLIVGGGDGGILREVARHSCVDAIDMCEIDPVVCEVSKRF-EFSTATAFADPRLNLVHEDAAEFVKRDGNGNYDVIIVDSSDPVGPAETLFQPAFYEHMRASLAPGGVVATQGECMWLHLPLIKTVLTSCAGSFAAVDYAFTTIPTYPCGQIGFVLGSNSPSRDLSVPVREPSAEMAEHLRYYSSAVHRAAFVLPAFAEKEIRGARR 726
            VLVLDGVIQVTERDEF+YQEM+ HIP FAHP P+ VLIVGGGDGG+LREV RHSCV  + MCEIDP+VCEVSK+F   STATAF DPR+ LVHEDAA FVK D    YDV+IVDSSDPVGPAETLF  AFYE +RA++ PG ++  QGEC+WLHL LI   + SC   F +VDYA+TTIPTYP GQIGF+L S + +  L  P R P+  + E L+YYS A H AAFVLP+FAE+ +   RR
Sbjct:   67 VLVLDGVIQVTERDEFAYQEMIAHIPLFAHPEPQSVLIVGGGDGGVLREVCRHSCVQHVTMCEIDPLVCEVSKKFLSKSTATAFDDPRVTLVHEDAARFVK-DHEDEYDVVIVDSSDPVGPAETLFTSAFYEGLRAAMRPGAIMCNQGECVWLHLELIGECMGSCKEVFPSVDYAYTTIPTYPSGQIGFLLCSTAANTSLRRPFRSPTPLVQEQLKYYSPAAHAAAFVLPSFAERVVSRVRR 307          
BLAST of mRNA_P-wetherbeei_contig9701.1.1 vs. uniprot
Match: A0A6V1NMD1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NMD1_HETAK)

HSP 1 Score: 317 bits (813), Expect = 1.460e-105
Identity = 160/242 (66.12%), Postives = 190/242 (78.51%), Query Frame = 1
Query:    4 VLVLDGVIQVTERDEFSYQEMLTHIPCFAHPCPKRVLIVGGGDGGILREVARHSCVDAIDMCEIDPVVCEVSKR-FEFSTATAFADPRLNLVHEDAAEFVKRDGNGNYDVIIVDSSDPVGPAETLFQPAFYEHMRASLAPGGVVATQGECMWLHLPLIKTVLTSCAGSFAAVDYAFTTIPTYPCGQIGFVLGSNSPSRD-LSVPVREPSAEMAEHLRYYSSAVHRAAFVLPAFAEKEIRGAR 723
            VLVLDGVIQ+TERDEF+YQEM+TH+P FAHP PK+VLI+GGGDGG+LREV +H  V+ IDMCEID VV + +K  F  STATA+ADPRLNLV  DAAE+++R+G+  YDVI+ DSSDPVGPAE+LFQPAFYE M  +L PGG+  TQGEC WLHL LI+ V+ +CA  F  V+Y +TTIPTYP GQIGFVL SN+P    L+ P R P A MA  LRYY  AVHRAAFVLPAFA   ++ AR
Sbjct:   70 VLVLDGVIQLTERDEFAYQEMITHLPMFAHPNPKKVLIIGGGDGGVLREVVKHPTVEKIDMCEIDDVVIQCAKDYFGESTATAYADPRLNLVQGDAAEYIRREGHERYDVIVCDSSDPVGPAESLFQPAFYEAMANALEPGGITCTQGECQWLHLELIEKVVAACASLFNQVEYGYTTIPTYPSGQIGFVLCSNNPQDGALTSPRRAPPAGMA--LRYYRPAVHRAAFVLPAFAHAAVQRAR 309          
BLAST of mRNA_P-wetherbeei_contig9701.1.1 vs. uniprot
Match: F0YCA3_AURAN (PABS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCA3_AURAN)

HSP 1 Score: 314 bits (805), Expect = 7.990e-105
Identity = 161/250 (64.40%), Postives = 189/250 (75.60%), Query Frame = 1
Query:    1 QVLVLDGVIQVTERDEFSYQEMLTHIPCFAHPCPKRVLIVGGGDGGILREVARHSCVDAIDMCEIDPVVCEVSKRF-EFSTATAFADPRLNLVHEDAAE-------FVKRDGNGN---YDVIIVDSSDPVGPAETLFQPAFYEHMRASLAPGGVVATQGECMWLHLPLIKTVLTSCAGSFAAVDYAFTTIPTYPCGQIGFVLGSNSPSRDLSV-PVREPSAEMAEHLRYYSSAVHRAAFVLPAFAEKEIR 714
            +VLVLDGVIQ+TERDEF+YQEM+ H+P F+HP PKRVLIVGGGDGG+LREVARH+CV+ IDMCEID  V EVSK+F   STATA+ D RL LVH DAA          +R   G    YDVIIVDSSDPVGPAETLF+PAFY+ MRA+LAPGG V TQGECMWLHLPLI  V+++C   F  V+YA+T +PTYP GQIGF++ S   SR   V PVR P   + + L+YYS  VH AAFVLP FAE+E+R
Sbjct:   51 RVLVLDGVIQLTERDEFAYQEMIAHLPLFSHPEPKRVLIVGGGDGGVLREVARHACVETIDMCEIDAGVVEVSKKFFAESTATAYGDARLTLVHADAAADPAVAAALARRQTPGGWPGYDVIIVDSSDPVGPAETLFEPAFYDSMRAALAPGGAVCTQGECMWLHLPLISKVVSACRDLFPTVEYAYTCVPTYPSGQIGFIMCSLDESRHALVKPVRAPVGHLQDQLKYYSPDVHAAAFVLPPFAERELR 300          
BLAST of mRNA_P-wetherbeei_contig9701.1.1 vs. uniprot
Match: K3WTM8_GLOUD (PABS domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WTM8_GLOUD)

HSP 1 Score: 310 bits (794), Expect = 3.500e-103
Identity = 155/243 (63.79%), Postives = 185/243 (76.13%), Query Frame = 1
Query:    4 VLVLDGVIQVTERDEFSYQEMLTHIPCFAHPCPKRVLIVGGGDGGILREVARHSCVDAIDMCEIDPVVCEVSKRFEFST-ATAFADPRLNLVHEDAAEFVKRDGNGNYDVIIVDSSDPVGPAETLFQPAFYEHMRASLAPGGVVATQGECMWLHLPLIKTVLTSCAGSFAAVDYAFTTIPTYPCGQIGFVLGSNSPSRDLSV-PVREPSAEMAEHLRYYSSAVHRAAFVLPAFAEKEIRGARR 726
            VLVLDGVIQ TERDEFSYQEM+TH+P FAH  PK VLIVGGGDGG+LREV +H  V+ I  CEIDP+VCEVSK+F  +T AT+F DPR  L+H DAA +++ +    +DVIIVDSSDPVGPAE LF+  FYE+M+ SLAPGG+V TQGEC+WLHL LI  VL  C   F  + YAFTTIPTYP GQIGF++ S   S+D  V P R P+AE+ E LRYY+S VH AAFVLP FAE++I   R+
Sbjct:   53 VLVLDGVIQCTERDEFSYQEMITHLPMFAHAQPKNVLIVGGGDGGVLREVVKHDSVEKIVFCEIDPMVCEVSKKFFKNTLATSFDDPRCTLIHADAAAYLRNNTTEKFDVIIVDSSDPVGPAEVLFRAEFYENMKKSLAPGGIVCTQGECLWLHLDLIVEVLGRCQNYFPTIQYAFTTIPTYPSGQIGFIVCSLDESKDALVKPKRAPTAEVQETLRYYNSKVHEAAFVLPQFAERKISTVRK 295          
BLAST of mRNA_P-wetherbeei_contig9701.1.1 vs. uniprot
Match: A0A024G1H4_9STRA (PABS domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G1H4_9STRA)

HSP 1 Score: 308 bits (789), Expect = 1.590e-102
Identity = 149/238 (62.61%), Postives = 184/238 (77.31%), Query Frame = 1
Query:    4 VLVLDGVIQVTERDEFSYQEMLTHIPCFAHPCPKRVLIVGGGDGGILREVARHSCVDAIDMCEIDPVVCEVSKRF-EFSTATAFADPRLNLVHEDAAEFVKRDGNGNYDVIIVDSSDPVGPAETLFQPAFYEHMRASLAPGGVVATQGECMWLHLPLIKTVLTSCAGSFAAVDYAFTTIPTYPCGQIGFVLGSNSPSRDLSVPVREPSAEMAEHLRYYSSAVHRAAFVLPAFAEKEIR 714
            VLVLDGVIQ TERDEF+YQEM+TH+P FAH  PK VLIVGGGDGG+LREVA+H+CV+ I MCEIDP VCEVSK+F   S A AF D RL+LVH DAA+++K +    +DV+IVDSSDP+GPA+ LFQ  FY+HMR +LA  G++ TQGEC+WLHL LIKTV++ C   F  V YA+TTIPTYP GQIGF++ SN  + D+  P R P+ E    LRYYS +VH  AF+LPAFAE+ ++
Sbjct:   51 VLVLDGVIQATERDEFAYQEMITHLPMFAHAKPKNVLIVGGGDGGVLREVAKHNCVERIVMCEIDPKVCEVSKKFFATSLAIAFNDTRLHLVHADAAKYLKDENTEKFDVVIVDSSDPIGPAQVLFQTEFYQHMRDALAADGIICTQGECVWLHLDLIKTVMSECNLLFPTVRYAYTTIPTYPSGQIGFIVCSNEKT-DVREPKRRPTLETENTLRYYSPSVHHGAFILPAFAERALK 287          
BLAST of mRNA_P-wetherbeei_contig9701.1.1 vs. uniprot
Match: A0A8K1FNW5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNW5_PYTOL)

HSP 1 Score: 307 bits (786), Expect = 5.020e-102
Identity = 156/243 (64.20%), Postives = 184/243 (75.72%), Query Frame = 1
Query:    4 VLVLDGVIQVTERDEFSYQEMLTHIPCFAHPCPKRVLIVGGGDGGILREVARHSCVDAIDMCEIDPVVCEVSKRF-EFSTATAFADPRLNLVHEDAAEFVKRDGNGNYDVIIVDSSDPVGPAETLFQPAFYEHMRASLAPGGVVATQGECMWLHLPLIKTVLTSCAGSFAAVDYAFTTIPTYPCGQIGFVLGSNSPSRDLSV-PVREPSAEMAEHLRYYSSAVHRAAFVLPAFAEKEIRGARR 726
            VLVLDGVIQ TERDEFSYQEM+TH+P FAH  PK VLIVGGGD G+LREVA+H  V+ I MCEIDP+VC+V+K+F   S AT F DPRL L+H DAA +++ +    +DVIIVDSSDPVGPAE LF+  FYE+M+ SL+PGG+V TQGEC+WLHL LI  VLT C   F  V YAFTTIPTYP GQIGFV+ S   S D  V P R PS E+A  LRYY++ VH AAFVLP FAE++I   R+
Sbjct:   49 VLVLDGVIQCTERDEFSYQEMITHLPMFAHAAPKNVLIVGGGDFGVLREVAKHDSVEKIVMCEIDPMVCDVAKKFFTNSLATTFNDPRLTLLHADAAAYLRDNTTEKFDVIIVDSSDPVGPAEVLFRAEFYENMKNSLSPGGIVCTQGECLWLHLDLIAEVLTRCHAYFPTVQYAFTTIPTYPSGQIGFVMCSLDDSADALVKPKRVPSDEVAATLRYYNTRVHEAAFVLPTFAERKIAPVRK 291          
BLAST of mRNA_P-wetherbeei_contig9701.1.1 vs. uniprot
Match: A0A7S4A7K5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7K5_9STRA)

HSP 1 Score: 307 bits (787), Expect = 1.460e-101
Identity = 158/264 (59.85%), Postives = 193/264 (73.11%), Query Frame = 1
Query:    1 QVLVLDGVIQVTERDEFSYQEMLTHIPCFAHPCPKRVLIVGGGDGGILREVARHSCVDAIDMCEIDPVVCEVSKR-FEFSTATAFADPRLNLVHEDAAEFVKR--DGNGN-------------------YDVIIVDSSDPVGPAETLFQPAFYEHMRASLAPGGVVATQGECMWLHLPLIKTVLTSCAGSFAAVDYAFTTIPTYPCGQIGFVLGS-NSPSRDLSVPVREPSAEMAEHLRYYSSAVHRAAFVLPAFAEKEIRGAR 723
            +VLVLDGVIQ+TERDEF+YQEM+ H+P FAH  PKRV IVGGGDGG+LREVARHSCV+ IDMCEID  V  V+K  F  STAT+F DPRL LVH DAA ++K   DG G+                   YDVIIVDSSDPVGPAETLF PAFY+ M+A+LAP G+V TQGEC+WLHLPLI  V+T+C  +F +V+YA+TT+PTYP GQIGFVL S +   R L  P R P+  + + LRYY+  VH A+F+LP FA +E++ +R
Sbjct:   75 KVLVLDGVIQLTERDEFAYQEMIAHLPLFAHAEPKRVCIVGGGDGGVLREVARHSCVEVIDMCEIDEQVVAVAKEHFSDSTATSFDDPRLTLVHADAAAYLKAIVDGKGDSSDPAIAAALKRRSSQWPGYDVIIVDSSDPVGPAETLFAPAFYDSMKAALAPNGIVCTQGECLWLHLPLIAKVVTACRATFPSVEYAYTTVPTYPSGQIGFVLCSLDDGERALIRPTRAPTTSLQKLLRYYNPDVHAASFILPEFAARELKKSR 338          
BLAST of mRNA_P-wetherbeei_contig9701.1.1 vs. uniprot
Match: A0A225VS69_9STRA (Spermidine synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VS69_9STRA)

HSP 1 Score: 305 bits (781), Expect = 2.520e-101
Identity = 147/243 (60.49%), Postives = 187/243 (76.95%), Query Frame = 1
Query:    4 VLVLDGVIQVTERDEFSYQEMLTHIPCFAHPCPKRVLIVGGGDGGILREVARHSCVDAIDMCEIDPVVCEVSKRFEFST-ATAFADPRLNLVHEDAAEFVKRDGNGNYDVIIVDSSDPVGPAETLFQPAFYEHMRASLAPGGVVATQGECMWLHLPLIKTVLTSCAGSFAAVDYAFTTIPTYPCGQIGFVLGS-NSPSRDLSVPVREPSAEMAEHLRYYSSAVHRAAFVLPAFAEKEIRGARR 726
            VLVLDGVIQVTERDEF+YQEM+ H+P FAH  PKRVL+VGGGDGG++RE+ +H CV+ I  CEID +VC+VSKRF   T ATAF DPR+ L+H DAA +++ + +  +DV+IVDSSDPVGPAE L++  FYE M+ SL+P GV+ATQGEC+WLHL LI  V+  C   F  VDY++TTIPTYP GQIGF++ S N     L+ P R P A+M + LRYYSS +H A+FVLP+FAE++I  AR+
Sbjct:   49 VLVLDGVIQVTERDEFAYQEMIAHLPLFAHKQPKRVLVVGGGDGGVVREIVKHECVEEIVWCEIDSMVCDVSKRFFKDTLATAFDDPRVKLLHADAAIYLRENTSDKFDVVIVDSSDPVGPAEVLYRAEFYESMKKSLSPDGVIATQGECLWLHLDLIVDVMQRCQNLFPTVDYSYTTIPTYPSGQIGFIMCSLNKSEGGLAKPKRSPDAKMEQTLRYYSSKIHEASFVLPSFAERKIATARK 291          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9701.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDK7_9STRA3.840e-13677.37Spermidine/spermine synthase n=1 Tax=Tribonema min... [more]
A0A6H5K487_9PHAE1.300e-12574.90SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A7S0J2H0_9EUKA5.720e-10665.70Hypothetical protein n=2 Tax=Coccolithales TaxID=4... [more]
A0A6V1NMD1_HETAK1.460e-10566.12Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0YCA3_AURAN7.990e-10564.40PABS domain-containing protein n=1 Tax=Aureococcus... [more]
K3WTM8_GLOUD3.500e-10363.79PABS domain-containing protein n=2 Tax=Pythiaceae ... [more]
A0A024G1H4_9STRA1.590e-10262.61PABS domain-containing protein n=1 Tax=Albugo cand... [more]
A0A8K1FNW5_PYTOL5.020e-10264.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S4A7K5_9STRA1.460e-10159.85Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A225VS69_9STRA2.520e-10160.49Spermidine synthase n=1 Tax=Phytophthora megakarya... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9701contigP-wetherbeei_contig9701:86..1967 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FKW3
Preferred nameSRM
PFAMsSpermine_synt_N,Spermine_synth
Model size738
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00021,RC00053,RC00060,RC00215,RC00225
KEGG koko:K00293,ko:K00797,ko:K00802,ko:K05353
KEGG ReactionR01153,R01920,R02315,R02869,R08359
KEGG Pathwayko00270,ko00300,ko00310,ko00330,ko00410,ko00480,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00310,map00330,map00410,map00480,map00960,map01100,map01110,map01130,map01230
KEGG ModuleM00030,M00032,M00034,M00133
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004766,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006575,GO:0006576,GO:0006595,GO:0006596,GO:0006597,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008215,GO:0008216,GO:0008295,GO:0009058,GO:0009108,GO:0009110,GO:0009308,GO:0009309,GO:0009653,GO:0009987,GO:0010033,GO:0015939,GO:0015940,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016768,GO:0017144,GO:0019752,GO:0030587,GO:0031150,GO:0031154,GO:0031288,GO:0032502,GO:0032787,GO:0034097,GO:0034641,GO:0036360,GO:0042221,GO:0042364,GO:0042398,GO:0042401,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046983,GO:0048856,GO:0050896,GO:0051186,GO:0051188,GO:0051703,GO:0051704,GO:0051716,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0071944,GO:0072330,GO:0090702,GO:0097164,GO:0099120,GO:1901564,GO:1901566,GO:1901576,GO:1990823,GO:1990830
Exons4
Evalue1.23e-125
EggNOG OGsCOG0421@1|root,KOG1562@2759|Eukaryota
EC1.5.1.10,2.1.1.53,2.5.1.16,2.5.1.22
Descriptionspermidine synthase activity
Cds size738
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187106.2388031-CDS-P-wetherbeei_contig9701:85..2591683187106.2388031-CDS-P-wetherbeei_contig9701:85..259Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9701 86..259 +
1683187106.2532525-CDS-P-wetherbeei_contig9701:743..9231683187106.2532525-CDS-P-wetherbeei_contig9701:743..923Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9701 744..923 +
1683187106.2683706-CDS-P-wetherbeei_contig9701:1291..15271683187106.2683706-CDS-P-wetherbeei_contig9701:1291..1527Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9701 1292..1527 +
1683187106.2780578-CDS-P-wetherbeei_contig9701:1819..19671683187106.2780578-CDS-P-wetherbeei_contig9701:1819..1967Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9701 1820..1967 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9701.1.1prot_P-wetherbeei_contig9701.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9701 86..1967 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9701.1.1

>prot_P-wetherbeei_contig9701.1.1 ID=prot_P-wetherbeei_contig9701.1.1|Name=mRNA_P-wetherbeei_contig9701.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=246bp
QVLVLDGVIQVTERDEFSYQEMLTHIPCFAHPCPKRVLIVGGGDGGILRE
VARHSCVDAIDMCEIDPVVCEVSKRFEFSTATAFADPRLNLVHEDAAEFV
KRDGNGNYDVIIVDSSDPVGPAETLFQPAFYEHMRASLAPGGVVATQGEC
MWLHLPLIKTVLTSCAGSFAAVDYAFTTIPTYPCGQIGFVLGSNSPSRDL
SVPVREPSAEMAEHLRYYSSAVHRAAFVLPAFAEKEIRGARRRAV*
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mRNA from alignment at P-wetherbeei_contig9701:86..1967+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9701.1.1 ID=mRNA_P-wetherbeei_contig9701.1.1|Name=mRNA_P-wetherbeei_contig9701.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1882bp|location=Sequence derived from alignment at P-wetherbeei_contig9701:86..1967+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGCTGGTGCTAGATGGCGTGATCCAGGTGACGGAGCGAGACGAGTT CTCGTACCAGGAGATGCTGACCCACATCCCCTGCTTCGCCCATCCATGCC CGAAGCGCGTCCTCATCGTCGGTGGCGGTGACGGCGGCATTCTGCGGGAG GTGGCGCGCCACTCCTGCGTCGACGTGAGAGACCCCCTGGGCGATTATGC CTTTTTGGAGGCCTTTTAGATCATTTTCTCTGTTTGCAGCTGTTTGCATA TTCTTTTCCTATTTGCAGATCCTTTTTCTGCTGTGAGGTGCAAGGCTGGG CTAGAGAAGATTGGTTGCATACTAGTGCTACTTTGTGTCGACTGTAATTT CGCTTGTTGATTGCCGTTTTGAATGAGTAAACACTGGGATTCCTTCTGAG ACCTAAAGGCTTCGCTGGATCCCAATGCCTCTTGCTCTCTTCATTCTTCT CCTTCATGAATGGCCCTTCGGCTTCCGACGGTGGCTGATGGGGCCGGTGG CGAAAATGGCGGTGGCGGCGGCGGCGACAATGGCTCTCCTGACGGTGGCT TTCGTGGCGTCTACGGCGGCGGCGGCAATCGCCTTGCCGACGGCGACGAT GGCGGCAACGGCGGCTACTGCTGCGGTACACATGCATCGTCTGCTCACAC TGCTTCAGGCGATTGACATGTGCGAGATCGACCCGGTGGTGTGCGAGGTG TCAAAGCGCTTCGAGTTCTCGACAGCGACGGCCTTTGCCGACCCGCGGCT CAACCTGGTGCACGAGGACGCTGCCGAGTTCGTCAAGCGGGACGGCAACG GCAACTACGATGTCATCATCGTCGACTCAAGCGACCCCGTGAGTTCAAAC TCTTTGCGGTTTCTTTGCCTCTTTCCGTCTTCCTTTTTTGGATTTGCCCC TCGGTCGTTTTTGCTAGGGTGTCGTTTGTCGGAGGGATAGATTAGGGAAA GGGCAGGGAAGAAGTGTTCAAATTACAGCATTTTCCAATCGTTTGTCTTT TGTGGAGATTTGGCTTCCTCGCTTGTTTCCTTGTTACGGGTGCACAATAA GGCAATCCTGCGCGCCACCTTGTGCCAGGATGCAAAGCGAGGCATGCCTT GGTAAAATTTAAAGACATATTTTCACCAAGAAAGAAGCACTCGACATATT GGCCGATTCCCCGGCCTTCCTATCCGTCCAACCCGGTGCCCGCGGGAAAT CGGCAGGTGGGTCCAGCGGAGACGCTCTTCCAGCCGGCCTTCTACGAGCA CATGCGGGCGTCGCTGGCGCCTGGCGGCGTCGTTGCCACACAGGGCGAGT GCATGTGGCTGCACCTGCCCCTGATTAAAACCGTACTGACGTCGTGCGCC GGCAGCTTCGCGGCGGTCGACTACGCCTTCACCACCATCCCCACCTACCC CTGCGGGCAAATCGGCTTCGTGCTCGGCTCCAATTCCCCCAGGTTGGTCC AGAAGTGTCGGTTATTGACTGGTTGATTTGGTTTGGTGGCTTCGTTTGCT GATCGGTCCTTCCGTTTGAATGGTTGCAATCCTAAGTAGGGCCGGCGCAC GTTTTAGTCCTGATCGCGCTTAACTACTGAATAGCCATAACTCCTCCTGC CTTCCAAAGCGCATCTTTGTTATTCCGCTATTTTACGTGCCCGCTCTGTC TGCGCGTCACCGTGCGTCACCGCCCCCCGCCTTTCGCTGCCGCCACTCGC CTTCCGCCGCCATACCGGCCACGACAACGGCGAGCAGGGACCTGTCGGTG CCGGTGCGTGAGCCGTCGGCTGAGATGGCGGAGCACCTCCGCTACTACAG CAGCGCCGTCCACCGCGCCGCCTTCGTGCTGCCGGCCTTCGCCGAGAAGG AGATCCGCGGCGCCCGCCGAAGAGCCGTCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9701:86..1967+

>mRNA_P-wetherbeei_contig9701.1.1 ID=mRNA_P-wetherbeei_contig9701.1.1|Name=mRNA_P-wetherbeei_contig9701.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=738bp|location=Sequence derived from alignment at P-wetherbeei_contig9701:86..1967+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGCTGGTGCTAGATGGCGTGATCCAGGTGACGGAGCGAGACGAGTT
CTCGTACCAGGAGATGCTGACCCACATCCCCTGCTTCGCCCATCCATGCC
CGAAGCGCGTCCTCATCGTCGGTGGCGGTGACGGCGGCATTCTGCGGGAG
GTGGCGCGCCACTCCTGCGTCGACGCGATTGACATGTGCGAGATCGACCC
GGTGGTGTGCGAGGTGTCAAAGCGCTTCGAGTTCTCGACAGCGACGGCCT
TTGCCGACCCGCGGCTCAACCTGGTGCACGAGGACGCTGCCGAGTTCGTC
AAGCGGGACGGCAACGGCAACTACGATGTCATCATCGTCGACTCAAGCGA
CCCCGTGGGTCCAGCGGAGACGCTCTTCCAGCCGGCCTTCTACGAGCACA
TGCGGGCGTCGCTGGCGCCTGGCGGCGTCGTTGCCACACAGGGCGAGTGC
ATGTGGCTGCACCTGCCCCTGATTAAAACCGTACTGACGTCGTGCGCCGG
CAGCTTCGCGGCGGTCGACTACGCCTTCACCACCATCCCCACCTACCCCT
GCGGGCAAATCGGCTTCGTGCTCGGCTCCAATTCCCCCAGCAGGGACCTG
TCGGTGCCGGTGCGTGAGCCGTCGGCTGAGATGGCGGAGCACCTCCGCTA
CTACAGCAGCGCCGTCCACCGCGCCGCCTTCGTGCTGCCGGCCTTCGCCG
AGAAGGAGATCCGCGGCGCCCGCCGAAGAGCCGTCTGA
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