mRNA_P-wetherbeei_contig970.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig970.3.1
Unique NamemRNA_P-wetherbeei_contig970.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig970.3.1 vs. uniprot
Match: A0A7S2RYK0_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RYK0_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.740e-67
Identity = 133/299 (44.48%), Postives = 188/299 (62.88%), Query Frame = 1
Query:    1 FLQAMWGFLCENVEMARMRERQGDFFRRTDISRHCGVRGLLELYGVDDRGEIENVHLSVALHESMQQVYDEVRQTAELPATWNDAVAALRTGE*IVATAGSTAVATDDHGALLHVQRKVQPWDVLDLVLRDGAEARRRNGAGVRRRPVVVCASLVDKRFNLGGLARTCEIFAADRLVVSNARVLEDRDFKATSVGAELWLTIEEVPEAALLPYLRRMRRDGYAVVGVEQTNNSVSLERAALPARAVLLLGREREGIPVDLLREVDVCVEIPQMGCIRSLNVHVSGALVLWEHTRQHMTE 897
            +L++MW FL EN+EM R+R++Q  FF   D+   C   GLL + GVD+  E    H+   +   +++VY E  +  E P  W      +   E I  T  +     DD G L++ QRK+ P D L+L +    +   RN AG   + ++VCASL+DK  NL GLART EIFAADRL++ +  V +  +FK+ SVGA  W+ IEE  E  LL +L + + +GY +VG+EQT++S  L +    A+ VLLLG+E+EGIPV+ L+ VDVCVEIPQ+G IRSLNVHVSGA+ +WE+T+Q M +
Sbjct:  867 YLKSMWSFLDENIEMKRLRKKQEKFFDGYDVDAVCQPEGLLGI-GVDEGDEANPTHMVEVIKNCLEEVYIEAHE-GEAPV-WKQMEELIHEVENI--TINNDIEDLDDSG-LVNFQRKILPLDTLNLAMDGSKQDTARNAAGRNCQDLIVCASLIDKVPNLAGLARTAEIFAADRLIIPDVGVCKMDNFKSISVGAGEWIKIEECKEKDLLSWLNQRKEEGYNIVGIEQTSSSQCLSKLEFGAKTVLLLGKEKEGIPVEFLQVVDVCVEIPQLGIIRSLNVHVSGAISIWEYTKQMMAQ 1159          
BLAST of mRNA_P-wetherbeei_contig970.3.1 vs. uniprot
Match: A0A7S4N1C3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N1C3_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.340e-64
Identity = 137/301 (45.51%), Postives = 188/301 (62.46%), Query Frame = 1
Query:    1 FLQAMWGFLCENVEMARMRERQGDFFRRTDISRHCGVRGLLELYGVDDRGEIENVHLSVALHESMQQVYDEVRQTAELPATWNDAVAALRT----GE*IVATAGSTAVATDDHGALLHVQRKVQPWDVLDLVLRDGAEARRRNGAGVRRRPVVVCASLVDKRFNLGGLARTCEIFAADRLVVSNARVLEDRDFKATSVGAELWLTIEEVPEAALLPYLRRMRRDGYAVVGVEQTNNSVSLERAALPARAVLLLGREREGIPVDLLREVDVCVEIPQMGCIRSLNVHVSGALVLWEHTRQHM 891
            +L+ M+ FL +N EM R+RE+Q  FF   D    C   GLL++  VD+  E + VHL+ A+   ++ V+ E  Q  E P TW  A   L       +  VA +G  +        L++ QRK+ P D L+L + +      RN AG  R+ ++VCASL+DK  NL GLART EIFAADRLVV +  V +  +FK+ SV AE W+ IEE  E  LL +L + +++GY +VGVEQT++S+ L       + VLLLG+E+EGIPV+ L  VDVCVEIPQ+G IRSLNVHVSGAL +WE+++Q M
Sbjct: 1266 YLRTMYEFLEQNPEMRRLREKQRRFFFAYDAESACTADGLLKI-SVDEGDEADPVHLADAVKRCLKNVFLE-SQANECP-TWKKADEQLSQLADQKDDDVAESGDES----SDSPLVNFQRKILPIDALNLAMEESRAESMRNAAGRARQGLIVCASLIDKVPNLAGLARTAEIFAADRLVVPDQSVRKMDNFKSISVSAEEWIRIEECKERDLLSWLNKRKQEGYTIVGVEQTSSSICLSSHHFDRKTVLLLGKEKEGIPVEFLSVVDVCVEIPQLGIIRSLNVHVSGALTIWEYSKQMM 1559          
BLAST of mRNA_P-wetherbeei_contig970.3.1 vs. uniprot
Match: A0A1Z5JLX6_FISSO (SpoU_methylase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLX6_FISSO)

HSP 1 Score: 229 bits (585), Expect = 1.840e-64
Identity = 133/300 (44.33%), Postives = 189/300 (63.00%), Query Frame = 1
Query:    1 FLQAMWGFLCENVEMARMRERQGDFFRRTDISRHCGVRGLLELYGVDDRGEIENVHLSVALHESMQQVYDEVRQTAELPATWNDAVAALRTGE*IVATAGSTAVATDDHGALLHVQRKVQPWDVLDLVLRDGAEARRRNGAGVRRRPVVVCASLVDKRFNLGGLARTCEIFAADRLVVSNARVLEDRDFKATSVGAELWLTIEEVPEAALLPYLRRMRRDGYAVVGVEQTNNSVSLERAALPAR-AVLLLGREREGIPVDLLREVDVCVEIPQMGCIRSLNVHVSGALVLWEHTRQHMTE 897
            +L+ ++  L EN EM R+R +Q DFF +  ++  C VRG+L++  VD+ GE    HL   + E +Q VY+E R   + P TW   +   +  E I     +TAV        ++ QRK+ P D L+L L   AE R R  AG  ++ ++VCASL+DK  NLGGLART EIF  D LV+ + +V +  +FK+ SVGA  W+T+EE  E  LL +L + R +G+ ++G+EQT+ SV L   + P R  VLLLG+E+EGIP+  L  VD CVEIPQ G IRSLNVHV+GA+ +WE+T+Q +T+
Sbjct: 1309 YLRTIYKHLDENAEMKRLRSKQVDFFNQYHVNEVCTVRGILDI-PVDEGGEAFPNHLVEVIKEGLQMVYEESRG-GDAP-TWK--LLQEKEDEPIDLQNSATAVCD-----AVNFQRKIIPLDALNLALESFAERRLRTAAGRTKQNLIVCASLIDKVPNLGGLARTSEIFGVDSLVIPDKKVAKMDNFKSISVGAGDWITVEECKEKNLLKWLTKKREEGFFILGIEQTSTSVQLSNFSFPDRPTVLLLGKEKEGIPIQYLHAVDECVEIPQFGIIRSLNVHVTGAITIWEYTKQMLTK 1598          
BLAST of mRNA_P-wetherbeei_contig970.3.1 vs. uniprot
Match: K0T6G3_THAOC (SpoU_methylase domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T6G3_THAOC)

HSP 1 Score: 227 bits (579), Expect = 2.410e-64
Identity = 125/296 (42.23%), Postives = 181/296 (61.15%), Query Frame = 1
Query:    4 LQAMWGFLCENVEMARMRERQGDFFRRTDISRHCGVRGLLELYGVDDRGEIENVHLSVALHESMQQVYDEVRQTAELPATWNDAVAALRTGE*IVATAGSTAVATDDHGALLHVQRKVQPWDVLDLVLRDGAEARRRNGAGVRRRPVVVCASLVDKRFNLGGLARTCEIFAADRLVVSNARVLEDRDFKATSVGAELWLTIEEVPEAALLPYLRRMRRDGYAVVGVEQTNNSVSLERAALPARAVLLLGREREGIPVDLLREVDVCVEIPQMGCIRSLNVHVSGALVLWEHTRQHM 891
            L++++ FL EN +M+R+R++Q DFF+  D+     + GLL +  V D  E    H   A+ E + + YDE     E    W      L   +   A         +D   L++ QRK+ P D LDL LR  +E    N AG +++ +VVCA+LVDK  NL GLARTCEIF+A  LV+ N ++ +  DFK+ S  A+ W+ +EEV E  LL +L + + +GY++VG+EQT +S  L R     + VLLLG+E+EGIP++ L  VD C+EIPQ+G IRSLNVHVSGA+ +WE+T+Q +
Sbjct:  629 LRSVYTFLEENSDMSRLRKKQEDFFQTYDVDSVTTLGGLLSI-PVGDGEEANPEHKIDAIKECLAETYDEAH--VEDAPVWKQMEDLLINADCNQALGEEENEGIEDEAQLVNFQRKILPIDALDLALRSISEQHLHNAAGKQKQKLVVCATLVDKVPNLAGLARTCEIFSASTLVMPNVQIRKQDDFKSISASADGWIDLEEVKEGDLLGWLHQKKSEGYSIVGLEQTASSKCLTRMKFSEKTVLLLGKEKEGIPIEFLSAVDQCIEIPQLGIIRSLNVHVSGAITVWEYTKQQL 921          
BLAST of mRNA_P-wetherbeei_contig970.3.1 vs. uniprot
Match: A0A6H5L234_9PHAE (SpoU_methylase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L234_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 2.010e-60
Identity = 130/327 (39.76%), Postives = 186/327 (56.88%), Query Frame = 1
Query:    4 LQAMWGFLCENVEMARMRERQGDFFRRTDISRHCGVRGLLELYGVDDRGEIENVHLSVALHESMQQVYDEVR----QTAELPATWNDAVAALRTG-----E*IVATAGSTAVATDDHGALL-----------HVQRKVQPWDVLDLVLRDGAEA--RRRNGAGVRRRPVVVCASLVDKRFNLGGLARTCEIFAADRLVVSNARVLEDRDFKATSVGAELWLTIEEVPEAALLPYLRRMRR-----DGYAVVGVEQTNNSVSLERAALPARAV--LLLGREREGIPVDLLREVDVCVEIPQMGCIRSLNVHVSGALVLWEHTRQHMTE 897
            LQA++ FL +N EM     RQ + F +TD    C V G+LE +G    GEI   H+     E+M ++++E      Q  E    W    AA+ +G     E   A AG+     ++ G  L           H+Q+K+ PWD LDL +     A   +   AG  R+PV++CASLVDK  N+ GLART EIFAA +LVV + RV++   F   S GAE WL +EEV E  L+ +LRR+++      G+ +VG+EQTNNS+ L +          L+LGRE  G+P+D++ E+DVC +IPQ G +RSLN HVSGA++L E++RQ + +
Sbjct:  175 LQALFDFLHDNPEM-----RQLEAFGQTDCDALCTVEGMLEAHGTGAAGEITPTHMCELFKETMDEIWNEALLDKVQVLEDGRAWLQTAAAVDSGAWFEEEGGRAGAGAADGVGEEAGLSLKSGXXXXXDSSHIQQKIIPWDTLDLTVASATSASLEQSTAAGRVRQPVIMCASLVDKVPNIAGLARTSEIFAATKLVVPDLRVMKSPAFTKISTGAEQWLPVEEVGEEQLVAWLRRVKKRRAGGGGHVLVGIEQTNNSICLTKIKFHRHLAYTLVLGRENSGLPLDVIGEMDVCCQIPQQGVLRSLNAHVSGAIILAEYSRQMLVD 496          
BLAST of mRNA_P-wetherbeei_contig970.3.1 vs. uniprot
Match: A0A448ZHP1_9STRA (SpoU_methylase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZHP1_9STRA)

HSP 1 Score: 214 bits (546), Expect = 3.120e-59
Identity = 127/301 (42.19%), Postives = 184/301 (61.13%), Query Frame = 1
Query:    1 FLQAMWGFLCENVEMARMRERQGDFFRRTDISRHCGVRGLLELYGVDDRGEIENVHLSVALHESMQQVYDEVRQTAELPATWNDAVAALRTGE*IVATAGSTAVATDDHGALLHVQRKVQPWDVLDLVLRDGAEARRRNGAGVRRRPVVVCASLVDKRFNLGGLARTCEIFAADRLVVSNARVLEDRDFKATSVGAELWLTIEEVPEAALLPYLRRMRRDGYAVVGVEQTNNSVSLERAALPA------RAVLLLGREREGIPVDLLREVDVCVEIPQMGCIRSLNVHVSGALVLWEHTRQ 885
            FL++ + FL +N EM R+R +Q  FF + D    C   G+  +  VD+  E + VH+  A+ ES++  YDE  ++ + P+ W      +   +     A S +  +++ G+   VQRK+ P D L+L L D  E R     G  ++ ++VCASLVDK  NL GLARTCEIFAA  LVV +  V +  +F++ SVGA  W+ +EEV E  LL +L   + +G+ +VG+EQT++S+ L +  +P       + VLLLG+E+EGIPV  L+ VD CVEIPQ G IRSLNVHVSGA+ +WE TR+
Sbjct: 1619 FLKSTYNFLDQNREMKRLRNKQTKFFDQYDCESLCTPEGVFSIR-VDESQEADPVHMIDAIKESLRNTYDEAHES-DAPS-WKQMEELMADND-----ANSDSEGSENIGSA--VQRKIIPLDSLNLTLEDLKEKRLSTATGAHKQNLIVCASLVDKVPNLAGLARTCEIFAAQSLVVPDMSVAKMDNFQSISVGAVDWIDMEEVKEEGLLLWLLEKKTEGFWIVGLEQTSSSIPLHQIDIPNFVAANNKTVLLLGKEKEGIPVQYLQAVDTCVEIPQFGMIRSLNVHVSGAITIWELTRR 1909          
BLAST of mRNA_P-wetherbeei_contig970.3.1 vs. uniprot
Match: A0A7S1C1B8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C1B8_9STRA)

HSP 1 Score: 213 bits (543), Expect = 7.770e-59
Identity = 128/291 (43.99%), Postives = 177/291 (60.82%), Query Frame = 1
Query:   13 MWGFLCENVEMARMRERQGDFFRRTDISRHCGVRGLLELYGVDDRGEIENVHLSVALHESMQQVYDEVRQTAELPATWNDAVAALRTGE*IVATAGSTAVATDDHGALLHVQRKVQPWDVLDLVLRDGAEARRRNGAGVRRRPVVVCASLVDKRFNLGGLARTCEIFAADRLVVSNARVLEDRDFKATSVGAELWLTIEEVPEAALLPYLRRMRRDGYAVVGVEQTNNSVSLERAALPARAVLLLGREREGIPVDLLREVDVCVEIPQMGCIRSLNVHVSGALVLWEHTRQ 885
            +W FL ++ EM R+R +Q  FF   D    C   GLL +  VD+  E    HL   + + +++VY E  Q  ++P  W     +L         AGST    +        QRK+ P D L+L L +  ++R +NGAG R+R ++VCASL+DK  NL GLART EIFA D LVV +  V++  +FK+ SVGA  W+ I+EV E   L +L + +  GY+VVG+EQT +S  + +     + VLLLGRE+EGIPV+ L+ VD CVEIPQMG IRSLNVHVSGA+ +WE+ +Q
Sbjct: 1511 IWNFLDQHPEMRRLRRKQIKFFHNYDAEATCTPEGLLSI-PVDEGDEACPTHLVDRMKKCLEEVYAEAHQD-DVPQ-WKQLEESLLQP---AVDAGSTTGGPN-------FQRKILPLDALNLALEEYKDSRGQNGAGNRKRNLIVCASLIDKVPNLAGLARTSEIFAVDSLVVPDRNVMKLDNFKSISVGAGDWVDIKEVKEKDTLRWLCKKKAQGYSVVGLEQTASSRCITKMQFSEKTVLLLGREKEGIPVEYLQLVDKCVEIPQMGVIRSLNVHVSGAITIWEYMKQ 1788          
BLAST of mRNA_P-wetherbeei_contig970.3.1 vs. uniprot
Match: B8C392_THAPS (SpoU_methylase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C392_THAPS)

HSP 1 Score: 213 bits (543), Expect = 7.860e-59
Identity = 119/296 (40.20%), Postives = 178/296 (60.14%), Query Frame = 1
Query:    4 LQAMWGFLCENVEMARMRERQGDFFRRTDISRHCGVRGLLELYGVDDRGEIENVHLSVALHESMQQVYDEVRQTAELPATWNDAVAALRTGE*IVATAGSTAVATDDHGALLHVQRKVQPWDVLDLVLRDGAEARRRNGAGVRRRPVVVCASLVDKRFNLGGLARTCEIFAADRLVVSNARVLEDRDFKATSVGAELWLTIEEVPEAALLPYLRRMRRDGYAVVGVEQTNNSVSLERAALPARAVLLLGREREGIPVDLLREVDVCVEIPQMGCIRSLNVHVSGALVLWEHTRQHM 891
            L+ ++ FL  N EM R+R++Q  FF   D+   C   GLL +  +DD  E   +H+  ++ + + +VY EV  +        D V   +  E ++    +  +  D    L++ QRK+ P D L+L ++   E +  N AG +++ +VVCA+LVDK  NL GLART EIFAA  LV+ N  V +  DFK+ S  A  W+ +EE  E  LL +L + + +G+ +VG+EQT++S  + +   P + VLLLG+E+EGIPV  L  VD C+EIPQ+G IRSLNVHV+GAL +W++T Q M
Sbjct: 1654 LRGIYSFLQMNNEMERLRKKQQHFFDTYDVDSTCTAEGLLSI-PIDDGEEACPLHMIDSIKDCLAEVYKEVHGSDI------DNVPYKQMEELLIDAEQAINIEADTEEELVNFQRKIMPLDALNLSIKSMHEQKLFNAAGKKKQQLVVCATLVDKVPNLAGLARTSEIFAAQTLVIPNLLVKKQDDFKSISASANDWIDMEECKEEDLLKWLYKKKAEGFTIVGLEQTSSSKCITKTKFPEKTVLLLGKEKEGIPVQYLSAVDTCIEIPQLGIIRSLNVHVTGALAIWKYTEQMM 1942          
BLAST of mRNA_P-wetherbeei_contig970.3.1 vs. uniprot
Match: A0A7S1ZWU9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZWU9_9STRA)

HSP 1 Score: 194 bits (493), Expect = 3.650e-58
Identity = 98/196 (50.00%), Postives = 137/196 (69.90%), Query Frame = 1
Query:  319 DDHGALLHVQRKVQPWDVLDLVLRDGAEARRRNGAGVRRRPVVVCASLVDKRFNLGGLARTCEIFAADRLVVSNARVLEDRDFKATSVGAELWLTIEEVPEAALLPYLRRMRRDGYAVVGVEQTNNSVSLERAALPARAVLLLGREREGIPVDLLREVDVCVEIPQMGCIRSLNVHVSGALVLWEHTRQHMTEGAA 906
            +D   L++ QRK+ P D L L +    E   +N AG R++ +V+CA+LVDK  NL GLART EIFAADRLV+ +  V +   FK+ SV A  W+TIEE  E  LL +L+  R +GY +VG+EQT++S  + +     + VLLLG+E+EGIPV+ L+ VD CVEIPQ+G +RSLNVHV+GA+ +WE+T+Q MT+ +A
Sbjct:    1 EDETKLVNFQRKILPLDSLHLSMEAVKEQGLKNAAGQRKQELVICATLVDKVPNLAGLARTAEIFAADRLVIPDTSVCKMDIFKSVSVSAGDWITIEECKEDGLLSWLKHQRENGYKIVGLEQTSSSSCISKTEFTGKTVLLLGKEKEGIPVEFLQVVDACVEIPQLGIVRSLNVHVTGAIAIWEYTKQMMTKKSA 196          
BLAST of mRNA_P-wetherbeei_contig970.3.1 vs. uniprot
Match: D8QRC1_SELML (SpoU_methylase domain-containing protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QRC1_SELML)

HSP 1 Score: 186 bits (471), Expect = 5.460e-55
Identity = 88/156 (56.41%), Postives = 122/156 (78.21%), Query Frame = 1
Query:  433 RRPVVVCASLVDKRFNLGGLARTCEIFAADRLVVSNARVLEDRDFKATSVGAELWLTIEEVPEAALLPYLRRMRRDGYAVVGVEQTNNSVSLERAALPARAVLLLGREREGIPVDLLREVDVCVEIPQMGCIRSLNVHVSGALVLWEHTRQHMTEG 900
            R+ ++V ASLV++  NL GLARTCE+F A  L V++ ++LEDR FK  SV AE W+ I EV E AL+ YL RM+ +GYAV+G+EQT NSV++   + P+R VL+LGRE++GIPV+L++ +D C+EIPQ+G IRSLNVHVSGA+ +WE+T+QH+  G
Sbjct:   28 RQDLIVVASLVERIPNLAGLARTCEVFKASALTVADKKILEDRQFKLISVTAEQWVPILEVKEGALIRYLERMKDEGYAVLGLEQTANSVAVNNYSFPSRVVLVLGREKDGIPVNLIQTLDACLEIPQLGMIRSLNVHVSGAIAVWEYTKQHLQGG 183          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig970.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2RYK0_9STRA1.740e-6744.48Hypothetical protein n=2 Tax=Eucampia antarctica T... [more]
A0A7S4N1C3_9STRA1.340e-6445.51Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1Z5JLX6_FISSO1.840e-6444.33SpoU_methylase domain-containing protein n=2 Tax=F... [more]
K0T6G3_THAOC2.410e-6442.23SpoU_methylase domain-containing protein (Fragment... [more]
A0A6H5L234_9PHAE2.010e-6039.76SpoU_methylase domain-containing protein n=1 Tax=E... [more]
A0A448ZHP1_9STRA3.120e-5942.19SpoU_methylase domain-containing protein n=1 Tax=P... [more]
A0A7S1C1B8_9STRA7.770e-5943.99Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
B8C392_THAPS7.860e-5940.20SpoU_methylase domain-containing protein n=1 Tax=T... [more]
A0A7S1ZWU9_9STRA3.650e-5850.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
D8QRC1_SELML5.460e-5556.41SpoU_methylase domain-containing protein (Fragment... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig970contigP-wetherbeei_contig970:7047..8180 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FX90
Preferred nameTARBP1
PFAMsSpoU_methylase
Model size915
Max annot lvl2759|Eukaryota
KEGG koko:K15333
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016423,GO:0016435,GO:0016740,GO:0016741,GO:0019219,GO:0019222,GO:0022613,GO:0030488,GO:0031167,GO:0031323,GO:0031326,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070039,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363,GO:1903506,GO:2000112,GO:2001141
Exons2
Evalue3.15e-08
EggNOG OGsCOG0566@1|root,KOG0839@2759|Eukaryota
EC2.1.1.34
Descriptionenzyme-directed rRNA 2'-O-methylation
Cds size270
COG categoryJ
BRITEko00000,ko01000,ko03016,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187106.1731853-UTR-P-wetherbeei_contig970:7046..70581683187106.1731853-UTR-P-wetherbeei_contig970:7046..7058Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig970 7047..7058 +
1683187106.207064-UTR-P-wetherbeei_contig970:7547..81801683187106.207064-UTR-P-wetherbeei_contig970:7547..8180Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig970 7548..8180 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187106.185404-CDS-P-wetherbeei_contig970:7058..73271683187106.185404-CDS-P-wetherbeei_contig970:7058..7327Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig970 7059..7327 +
1683187106.1964748-CDS-P-wetherbeei_contig970:7546..75471683187106.1964748-CDS-P-wetherbeei_contig970:7546..7547Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig970 7547..7547 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig970.3.1prot_P-wetherbeei_contig970.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig970 7059..7547 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig970.3.1

>prot_P-wetherbeei_contig970.3.1 ID=prot_P-wetherbeei_contig970.3.1|Name=mRNA_P-wetherbeei_contig970.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=90bp
MWGFLCENVEMARMRERQGDFFRRTDISRHCGVRGLLELYGVDDRGEIEN
VHLSVALHESMQQVYDEVRQTAELPATWNDAVAALRTGE*
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mRNA from alignment at P-wetherbeei_contig970:7047..8180+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig970.3.1 ID=mRNA_P-wetherbeei_contig970.3.1|Name=mRNA_P-wetherbeei_contig970.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1134bp|location=Sequence derived from alignment at P-wetherbeei_contig970:7047..8180+ (Phaeothamnion wetherbeei SAG_119_79)
TTCCTGCAGGCAATGTGGGGCTTCCTCTGCGAGAACGTCGAGATGGCACG CATGCGCGAGCGGCAGGGCGACTTCTTCCGCCGCACCGACATCTCCAGGC ACTGCGGCGTCCGCGGGCTGCTGGAGCTGTACGGCGTGGACGACCGCGGC GAGATTGAGAACGTGCACCTGTCGGTGGCGCTGCACGAGTCCATGCAGCA GGTCTACGACGAGGTGCGGCAGACGGCCGAGCTACCCGCCACGTGGAACG ATGCCGTGGCAGCGCTGCGCACCGGCGAGTGGTTCCAGCAGCAGCGGGAG AGCGCCAACGCTGTTGCCGCGGCCGCTGCGGCCGCCGCGGCAGGGGCGTC GAGACCTGCTGCCGCTGTCGGTGAGAGTGTCAGTGGAGCCGCCGCTGCTA CTGTTGATAGGAGTGGAACTTCGCTCGCCGCCGCTGGGAATGGAGCGTCG GTCGCCGTCGCCGCCGATGCCGCCGTCGGCAGTGCCGGCGGCGACGGTAG AATTGTGGCAACGGCGGGTTCGACGGCGGTTGCGACGGACGACCACGGCG CGCTGCTGCACGTGCAGCGCAAGGTGCAGCCATGGGATGTGCTGGACCTC GTGCTCCGCGACGGTGCCGAGGCGCGCCGCCGCAACGGTGCTGGCGTGCG GCGTCGCCCCGTCGTTGTCTGCGCGTCGCTCGTCGACAAGCGCTTCAACC TCGGCGGCCTCGCCCGGACCTGCGAGATCTTCGCCGCCGACCGCCTCGTG GTCAGCAACGCACGTGTGCTGGAGGACCGCGACTTCAAGGCGACGTCGGT CGGCGCCGAGTTGTGGCTGACCATCGAAGAGGTGCCGGAGGCAGCGCTGC TGCCGTACCTGCGGCGGATGCGGCGCGACGGCTATGCAGTGGTGGGCGTG GAGCAGACCAACAACAGCGTGTCGCTGGAGCGGGCGGCACTGCCGGCGCG CGCCGTGCTGCTGCTGGGGCGGGAGCGGGAGGGAATTCCCGTCGATTTGC TGCGGGAAGTCGACGTCTGCGTGGAGATCCCGCAGATGGGCTGCATCAGG AGTCTCAACGTGCATGTCAGCGGGGCGCTAGTGCTGTGGGAGCACACGCG TCAACACATGACGGAGGGTGCGGCGACGACGGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig970:7047..8180+

>mRNA_P-wetherbeei_contig970.3.1 ID=mRNA_P-wetherbeei_contig970.3.1|Name=mRNA_P-wetherbeei_contig970.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=270bp|location=Sequence derived from alignment at P-wetherbeei_contig970:7047..8180+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGGGCTTCCTCTGCGAGAACGTCGAGATGGCACGCATGCGCGAGCG
GCAGGGCGACTTCTTCCGCCGCACCGACATCTCCAGGCACTGCGGCGTCC
GCGGGCTGCTGGAGCTGTACGGCGTGGACGACCGCGGCGAGATTGAGAAC
GTGCACCTGTCGGTGGCGCTGCACGAGTCCATGCAGCAGGTCTACGACGA
GGTGCGGCAGACGGCCGAGCTACCCGCCACGTGGAACGATGCCGTGGCAG
CGCTGCGCACCGGCGAGTGA
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