mRNA_P-wetherbeei_contig97.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig97.1.1 vs. uniprot
Match: D8LQ47_ECTSI (APPLE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ47_ECTSI) HSP 1 Score: 324 bits (831), Expect = 4.060e-105 Identity = 178/348 (51.15%), Postives = 218/348 (62.64%), Query Frame = 1 Query: 10 VKVLAEKMRASSRSLPARADL-VSWGFKAPVSMLLLPFFEQAWGSFRFLHVVRDGRDLAFSGNQTPVSKFYDATFPANGSGGRRRWEQKGME--AVKAIELWDRWNSDLFEWAGER--RNGHSLDYLLLHTEDLLDPAAKFAAVKDVAEFVGSQLSDHDLCCIATETARDMGTHTKLDRKEKRTAVTNRFGKWRDKIEGKPDLGAALHATGARGLALFGYEPERALRGTAGEYVCDAPPANCPKP---PPPARPAT-----GPAGVRAPRLSAPKTVTDTDRCKGLKIGLDYKGADLYFQPATSYLECCDICRDVERCTHFTMDFRSGQCFLKEGTGTASRRTSLVSG 1014 +KV +KM SR A VSWGFKAPVSM+L+PFFE+AWG +FLHVVRDGRD+AFSGNQTPV KFY FP G R + G + +VKA+ LW+ WN + WA R R LDYLLLH EDL+DP AKFAA+KDVAEFVGS LSD DLCCIATE ++DMG+HTK + R +T+RFGKW++K+E KP+L LH G RGL FGYEPER+LR ++G CPKP P P+R + A V AP P V DT C GLK+ +D+ G D A +L CC C + C+HFT D+ SG C+LK G G + + LVSG Sbjct: 107 LKVQMQKMAGKSRPTGGEAAKHVSWGFKAPVSMVLVPFFEEAWGKAKFLHVVRDGRDIAFSGNQTPVEKFYADMFPE----GTR---ESGFKEPSVKAMALWNSWNVGVHHWAASRKERGATGLDYLLLHAEDLIDPEAKFAAIKDVAEFVGSPLSDFDLCCIATEGSKDMGSHTKSQKD--RGKITSRFGKWKNKVEAKPELSKQLHDEGERGLRTFGYEPERSLRASSGFQCAAERDPTCPKPASSPQPSRSSRPKNLKAQAQVPAPIAPVPAAVEDTATCVGLKLNMDFNGFDSKAVHAQDHLGCCQECHQADGCSHFTFDYSSGVCYLKVGQGVQNFKVGLVSG 445
BLAST of mRNA_P-wetherbeei_contig97.1.1 vs. uniprot
Match: A0A6H5L0U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0U6_9PHAE) HSP 1 Score: 219 bits (557), Expect = 6.230e-66 Identity = 116/198 (58.59%), Postives = 140/198 (70.71%), Query Frame = 1 Query: 10 VKVLAEKMRASSRSLPARA-DLVSWGFKAPVSMLLLPFFEQAWGSFRFLHVVRDGRDLAFSGNQTPVSKFYDATFPANGSGGRRRWEQKGME--AVKAIELWDRWNSDLFEWAGER--RNGHSLDYLLLHTEDLLDPAAKFAAVKDVAEFVGSQLSDHDLCCIATETARDMGTHTKLDRKEKRTAVTNRFGKWRDKIE 588 +K +KM SRS+ A VSWGFKAPVSM+L+PFFE+AWG +FLHVVRDGRD+AFSGNQTPV KFY FP G R + G + +VKA+ LW+ WN + WA R R LDYLLLH EDL+DP AKFAA+KDVAEFVGS LSD DLCCIATE ++DMG+HTK + R +T+RFGKW+ +IE Sbjct: 107 LKAQMQKMTGKSRSIGGEAAKYVSWGFKAPVSMVLVPFFEEAWGKAKFLHVVRDGRDIAFSGNQTPVEKFYADMFPE----GTR---ESGFKEPSVKAMALWNSWNVGVHHWAASRKERGATGLDYLLLHAEDLIDPEAKFAAIKDVAEFVGSPLSDFDLCCIATEGSKDMGSHTKSQKD--RGKITSRFGKWKARIE 295
BLAST of mRNA_P-wetherbeei_contig97.1.1 vs. uniprot
Match: A0A482SCK3_9ARCH (APPLE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCK3_9ARCH) HSP 1 Score: 152 bits (384), Expect = 4.600e-38 Identity = 108/348 (31.03%), Postives = 162/348 (46.55%), Query Frame = 1 Query: 58 ARADLVSWGFKAPVSMLLLPFFEQAWGSFRFLHVVRDGRDLAFSGNQTPVSKFYDATFPANGSGGRRRWEQKGMEAVKAIELWDRWNSDLFEWAG------ERRNGHSLD----YLLLHTEDLLDP--AAKFAAVKDVAEFVGSQLSDHDLCCIATETARDMGTHTKLDRKEKRTAVTNRFGKWRDKIEGKPDLGAALHATGARGLALFGYEPERALR-------GTAGEYVCDAPPANCPKPPPPARPATGPAGVRAPRLSAPKTVTDTDRCKGLKIGLDYKGADL--YFQPAT-----SYLECCDICRDVERCTHFTMDFRSGQCFLKEGTGTASRRTSLVSGYVV 1023 A A + +GFKAPV+M LLP++ +FLHV+RDGRD+AFS NQ PV KFY+ + + + + + V+AI+LW WN + +W+ N S D Y++LH+ED++ P ++ A+ +A +VGS +S +CC+A + + MG+H DR + V+ R+GKW L L+ G GL LFGY+P R G G Y C +C P R T + +++G+D+ GAD+ P T S + CC+ C+ C FT C+LK + L+SG VV Sbjct: 233 AHASAIQYGFKAPVAMTLLPYWTSVLPRVKFLHVLRDGRDIAFSANQGPVEKFYEDMYAKHAADVKDK-------RVQAIQLWSDWNVGILQWSLAYVQSLSNTNTSSSDKGYGYMMLHSEDIVSPDMQVRYEAMAKLAMYVGSDMSADRICCMAVKDSTFMGSH---DRSQ-HAVVSKRYGKWEGYTRNNKGLLDQLYGKGKEGLKLFGYDPLRTSSTLVEDGGGLLG-YRCVKQTDDCLDP-------------EEKRQQEELVATVKQKNCMVQMGVDFPGADISSVSMPETMLMVESAVFCCEQCKVNPACKFFTTAHSQHVCYLKSSQTDVVSKEQLISGAVV 555
BLAST of mRNA_P-wetherbeei_contig97.1.1 vs. uniprot
Match: A0A1Z5JYM4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYM4_FISSO) HSP 1 Score: 134 bits (336), Expect = 6.370e-32 Identity = 81/220 (36.82%), Postives = 119/220 (54.09%), Query Frame = 1 Query: 4 RAVKVLAEKMRASSRSLPARADLVSWGFKAPVSMLLLPFFEQAWGSFRFLHVVRDGRDLAFSGNQTPVSKFYDATFPANGSGGRRRWEQKGMEAVK-----AIELWDRWNSDLFEWAGERRNGHSLDYLLLHTEDLLDPAAKFAAVKDVAEFVGSQLSDHDLCCIATETARDMGTHTKLDRKEKRTAVTNRFGKWRDKIEGKPDLGAALHATGARGLALF 648 RA+++L E + + LP R + +GFKAPVSMLLLP + + + +FLHV+RDGRD+A S N +PV KFY +P E G + V A++LW+ WN+ ++E+ S+DYL + TEDLL+P +F A++ VAEFVGS LS LCC++ + DMG K++ + G+PD+ L A +A F Sbjct: 101 RALRLLMEAHK-KGKELPHR---IRYGFKAPVSMLLLPVLLETFENIKFLHVIRDGRDIALSSNTSPVDKFYRTFYPNAAEQVTMLHEALGNDTVSVKQVMAMQLWNDWNTQVYEFGTSHP---SIDYLPIKTEDLLNPVTRFEAIQQVAEFVGSPLSTAQLCCLSQKELHDMGKSMNFQGKQENS--------------GRPDVRTQLEAKDKSLVASF 299
BLAST of mRNA_P-wetherbeei_contig97.1.1 vs. uniprot
Match: A0A7S1GKE0_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKE0_CYCTE) HSP 1 Score: 127 bits (318), Expect = 1.520e-31 Identity = 62/152 (40.79%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 55 PARADLVSWGFKAPVSMLLLPFFEQAWGSFRFLHVVRDGRDLAFSGNQTPVSKFYDATFPANGSGGRRRWEQKG-MEAVKAIELWDRWNSDLFEWAGERRNGHSLDYLLLHTEDLLDPAAKFAAVKDVAEFVGSQLSDHDLCCIATETARDM 507 PAR V +GFKAP++M+L+P + G ++LH+VRDGRD+AFS NQ+PV K Y + R ++ G + V+ + LW+ WN+ L +W E G D+L++ TEDLLDPA +F ++ +A FVGS +S ++CC++ DM Sbjct: 57 PAR--WVEYGFKAPITMVLVPILREVLGPMKYLHIVRDGRDVAFSTNQSPVKKLYHTMYQ---DARLRSYKYSGNLSWVRGVHLWNDWNTQLLQWEKENA-GDRFDFLVVRTEDLLDPAKRFDSLLQLAHFVGSSISTEEICCLSQSATVDM 202
BLAST of mRNA_P-wetherbeei_contig97.1.1 vs. uniprot
Match: A0A7S2V2Z6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Z6_9STRA) HSP 1 Score: 120 bits (300), Expect = 2.800e-29 Identity = 77/194 (39.69%), Postives = 109/194 (56.19%), Query Frame = 1 Query: 352 NGHSLDYLLLHTEDLLD-PAAKFAAVKDVAEFVGSQLSDHDLCCIATETARDMGTHTKLDRKEKRTAVTNRFGKWRDKIEGKPDLGAALHATGARGLALFGYEPERALRGTAGEYVCDAPPANCPKPPPPARPATGPAGVRAPRLSAP-KTVTDTDRCKGLKIGLDYKGADLYFQPATSYLECCDICRDVERCT 927 +G +DY+++ TEDL+ P + AAV+ +A FVGS LSD +LCCI +E +DMG+H+ + KEK+ AV R+GKW K+EGKP+L +LH GA GL FGY+P + G A + C+ C P G ++ P A T DTD G G+D+ QP+ + ECCDIC + C+ Sbjct: 5 DGKEVDYMMVRTEDLVGGPGTRTAAVRAIAAFVGSPLSDEELCCIGSEATKDMGSHS-YNVKEKK-AVQQRYGKWHSKVEGKPELEKSLHEAGAAGLKAFGYKPN--VDGEA--FTCE-----CRNP--------GVLNMKKPLKHAECVTFKDTDFKGG--------GSDIADQPSQNPQECCDICGSFKGCS 171
BLAST of mRNA_P-wetherbeei_contig97.1.1 vs. uniprot
Match: A0A7S1ZUS5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZUS5_TRICV) HSP 1 Score: 115 bits (289), Expect = 4.090e-28 Identity = 55/139 (39.57%), Postives = 84/139 (60.43%), Query Frame = 1 Query: 118 FFEQAWGSFRFLHVVRDGRDLAFSGNQTPVSKFYDATFPANGSGGRRRWEQKGMEAVKAIELWDRWNSDLFEW------AGERRNGHSLDYLLLHTEDLL--DPAAKFAAVKDVAEFVGSQLSDHDLCCIATETARDMG 510 FF ++ F+F+HV+RDGRD+A+SGNQ+PV KFY+ TFP G V+ +ELW+ WN+ W +GE+R DYL++H EDL+ P + AAV ++A FVGS++S+ ++CC+ + +G Sbjct: 1 FFLESNPGFKFIHVIRDGRDIAYSGNQSPVEKFYNITFPPEKDNGEHWMRYAETPGVRGLELWNLWNTQTLNWEKRIAESGEKR----FDYLIVHIEDLVARGPETRAAAVMEIANFVGSRVSNEEICCLIKQEQTSLG 135
BLAST of mRNA_P-wetherbeei_contig97.1.1 vs. uniprot
Match: A0A7S1FP45_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP45_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.820e-27 Identity = 80/242 (33.06%), Postives = 119/242 (49.17%), Query Frame = 1 Query: 73 VSWGFKAPVSMLLLPFFEQAWGS----------------FRFLHVVRDGRDLAFSGNQTPVSKFYDATFP-ANGSGGRRRWEQKGMEAVKAIELWDRWNSDLFEWAGERRNGHS-----------LDYLLLHTEDLL--DPAAKFAAVKDVAEFVGSQLSDHDLCCIATETARDMGTHTKLDRKEKRTAVTNRFGKWRDKIEGKPDLGAALHATGARGLALFGYEPERAL---RGTAGEYVC 699 +S+G KAP SML+LP +Q + S F+F+HV+RDGRD+AFS NQ+PV+KF+D P AN R E+ E + A++LW+ +N W ER+ DY + ED + D + +F K +A +GS L+D ++CC+A + + K+ + +GKW+ KI+ L LH G+ L LFGYEP A + G Y+C Sbjct: 299 ISYGIKAPASMLMLPLLDQIYSSSGSGNGASDSNRNEKGFKFIHVLRDGRDVAFSKNQSPVNKFFDLVNPEANNM--RLDAEEVPCE-ICAMQLWNDFNVQAHNWLKERKKRDKERDSTDPVKSRFDYATVRVEDTMSDDISVRFNTFKSLATLIGSPLTDDEICCVAKKER-----NIKIGNTAETIQKHEVYGKWKKKIKSNTKLSKDLHDIGSEALQLFGYEPFTASLDDKKERGGYIC 532
BLAST of mRNA_P-wetherbeei_contig97.1.1 vs. uniprot
Match: A0A7R9U6Q8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Q8_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.380e-26 Identity = 84/238 (35.29%), Postives = 114/238 (47.90%), Query Frame = 1 Query: 76 SWGFKAPVSMLLLPFFEQAWGS----FRFLHVVRDGRDLAFSGNQTPVSKFYDATFPANGSGGRRRWEQKGMEAVKAIELWDRWNSDLFEWAGERRNGHS---------------------------------LDYLLLHTEDLLDPAAKFAAVKDVAEFVGSQLSDHDLCCIATETARDMGTHTKLDRKEKRTAVTNRFGKWRDKIEGKPDLGAALHATG-----ARGLALFGYEPE 663 SWGFKAP+SML +P F A R LHV+RDGRDL+FSGNQ+PV K + P + +Q G EA A++LWD +++ W+ RRN L YLL+ ED + K A V+ VA FVG+ +C + A D+G+H K++R R + RFGKW++KI GK A A +R L +FGY+PE Sbjct: 241 SWGFKAPISMLTIPVFAHALAQRGQGLRVLHVLRDGRDLSFSGNQSPVQKLWHPLHPTTSA------KQFGAEAA-ALQLWD--ENNVGAWSFARRNAAKPGPVEVALSATEAIQVPPELAAASRMPSLKEAFLGYLLVRIEDFVFKDRKAALVQRVAAFVGAPTDKESVCRVVRLPATDLGSHGKVNR---RAGLAARFGKWKEKI-GKISSEIARQAMSKSVRDSRALKMFGYDPE 465
BLAST of mRNA_P-wetherbeei_contig97.1.1 vs. uniprot
Match: A0A1E7EYM7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EYM7_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.170e-23 Identity = 64/184 (34.78%), Postives = 100/184 (54.35%), Query Frame = 1 Query: 55 PARADLVSWGFKAPVSMLLLPFFEQA-------------------------WGSFRFLHVVRDGRDLAFSGNQTPVSKFYDATFPANGSGGRRRW-EQKGMEAVKAIELWDRWNSDLFEWAGERRNGHSLDYLLLHTEDLL-----DPAAKFAAVKDVAEFVGSQLSDHDLCCIATETARDMGT 513 P A VS+ FKAPV+MLLLP F + +F+HVVRDGRD+A S NQ+PV+KFY+AT+P + + + +++V+A++LW+ WN WA +N + +DYL++ TEDL+ + K+ + ++ FVGS S +LCC+ + ++D GT Sbjct: 330 PYEASKVSYAFKAPVTMLLLPIFTSIIDTIFIENNNINNDDSDVDKSLLYQYPKVKFIHVVRDGRDVALSSNQSPVNKFYNATYPNDYKVRQALYGHDPDIQSVRAMQLWNDWNIQTRSWA--IKNPNKIDYLMIRTEDLIGSKSGNTKVKYDVLLALSNFVGSPRSRKELCCLTYKQSKDYGT 511 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig97.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig97.1.1 >prot_P-wetherbeei_contig97.1.1 ID=prot_P-wetherbeei_contig97.1.1|Name=mRNA_P-wetherbeei_contig97.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=333bp MRASSRSLPARADLVSWGFKAPVSMLLLPFFEQAWGSFRFLHVVRDGRDLback to top mRNA from alignment at P-wetherbeei_contig97:12253..14488- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig97.1.1 ID=mRNA_P-wetherbeei_contig97.1.1|Name=mRNA_P-wetherbeei_contig97.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2236bp|location=Sequence derived from alignment at P-wetherbeei_contig97:12253..14488- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig97:12253..14488- >mRNA_P-wetherbeei_contig97.1.1 ID=mRNA_P-wetherbeei_contig97.1.1|Name=mRNA_P-wetherbeei_contig97.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=999bp|location=Sequence derived from alignment at P-wetherbeei_contig97:12253..14488- (Phaeothamnion wetherbeei SAG_119_79)back to top |