mRNA_P-wetherbeei_contig9695.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: A0A836CJZ4_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ4_9STRA) HSP 1 Score: 616 bits (1588), Expect = 8.040e-213 Identity = 304/392 (77.55%), Postives = 346/392 (88.27%), Query Frame = 1 Query: 10 LQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQ---VGGAEGL-----LANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 1161 ++LC+FYE+YD NGSD+VMP GIYS+EDLK FGR++ WCPYFLARHVINHAN+LVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSV L+R L+AA RCLG++SS+V ++K DQ RLN EY RLVNGLA DNA G +G+ LANPALPAD+L EAVPGNIRRAEHFV+F+RK++EHLK R+R NVESETPLAFLHRLQQ T++E KPLRF YSRLNSLLRTLE+T LD++ PL AVADFATLV+TY++GFA+V EP GSVIPGVYEPV+QL CLD+SLAIKPV ERF SV+ITSGTLSPIDLYPKLL F PVVR+SLPMSTFR CICPLVVTRGSDQLA+STKFDLREDPSVVRNYGSL++ELA ++PDG Sbjct: 190 IELCQFYEEYDANGSDSVMPSGIYSIEDLKDFGREKGWCPYFLARHVINHANILVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVQLNRHNLEAASRCLGRVSSKVTDMKQHDQRRLNEEYQRLVNGLA-DNAAGPLPAGVQGIADNNMLANPALPADVLAEAVPGNIRRAEHFVSFLRKLIEHLKVRIRATNVESETPLAFLHRLQQNTTIERKPLRFTYSRLNSLLRTLEVTNLDDFRPLSAVADFATLVATYQEGFAIVIEPEGSVIPGVYEPVLQLACLDASLAIKPVFERFGSVVITSGTLSPIDLYPKLLNFHPVVRSSLPMSTFRRCICPLVVTRGSDQLAISTKFDLREDPSVVRNYGSLIIELAAAIPDG 580
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: D8LDN2_ECTSI (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN2_ECTSI) HSP 1 Score: 597 bits (1539), Expect = 2.870e-206 Identity = 305/429 (71.10%), Postives = 344/429 (80.19%), Query Frame = 1 Query: 1 GGGLQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQD-----NAQVGG-------------------------------------AEGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 1161 GGG +LCEF+E Y NGSDA MP GIYSL+DLK FG+++ WCPYFLARH+INHANVLVYNYQYMLDPKVAG+VSRELEAESVVVFDEAHNIDNVCTEALSV LD+R LDAA RCLGK+SS+V +K +DQARLNAEY RLV+GLA + V G A+ + ANPALPADILQEAVPGNIRRAEHFV+FMRK+VEH KTRVRVQ+VESETPLAF+HR+QQ T+LE KPL+FAYSRLNSLLRTLE+TGLD++ PL VADFATLV TY +GFAVV EP GSV+PGVYEPVM+L CLD+SLAI+PV ERF SV+ITSGTLSP+DLYPKLLGFSPVVR +L MST R CICPLVVTRGSDQL MSTKFD R+DPSVVRNYG+L++ELA VPDG Sbjct: 149 GGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVAAAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFVHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASVVITSGTLSPLDLYPKLLGFSPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALMIELAAIVPDG 577
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: K8YZX4_NANGC (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZX4_NANGC) HSP 1 Score: 535 bits (1378), Expect = 1.540e-180 Identity = 265/396 (66.92%), Postives = 323/396 (81.57%), Query Frame = 1 Query: 10 LQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGGAEG----------LLANPA--LPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 1161 ++LC++YE+Y++NG+DA + GIYSL+DLK G+ R WCPYFLARH+INHAN+L+YNYQY+LDPKVAGLVS+ELEAES+VVFDEAHNIDNVC EALSV LD R LD A RCLGKLS++V+ +K D +LN EY RLV GLA+ A +GGA G +LANP LP + QEAVPGNIRRAEHF+ FM+K+VEHLKT +RV + + ++PLAFLH LQ +T+LE KPLRF YSRLNSLLRTLE+T LDE+NPLQ VADFATLV+TY +GF V+TEP GS IPG+ +PV+QL+CLD+SLAIKPV ERF+SVIITSGTLSP+DLYP LL F+PVVR S+ MS FR ICPLVVT+GS Q ++T+F+ R+DPSV R+YG LLVE+A VPDG Sbjct: 153 VELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGA-LGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDG 547
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: A0A7S2GG08_9STRA (DNA helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GG08_9STRA) HSP 1 Score: 518 bits (1334), Expect = 1.120e-178 Identity = 255/384 (66.41%), Postives = 311/384 (80.99%), Query Frame = 1 Query: 4 GGLQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGGAEGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRV----RVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELA 1143 G ++ C+FYE+YD+ GSDA +P GI+SL+DLKV GR++ WCPYFLARHVINHA VLVYNYQYMLDPKVAG+VSRELE+ESVV+FDEAHNIDNVC EALSV LDRR + AA + L +S++V +K D +RL EY RLV GL ++ G + +LANP+LPAD+L EAVPGNIRRAEHFV+F+R I+ HL+ R+ VE+ETPLAF+HRL T E KPL+FAYSRLNSLLRTLE+T LD+YNPLQ V D TLV+TY GFA+V EPNGS+IPGVYEP +QL CLD+S+AIKPV ERF SVIITSGTLSP+DLYP+LL F PV+R SL MS FR ICPLV+T+GSDQ +ST+F++R++P VVRNYG+LL++LA Sbjct: 194 GSVETCDFYEEYDKAGSDAAIPNGIFSLDDLKVLGREKGWCPYFLARHVINHAKVLVYNYQYMLDPKVAGMVSRELESESVVIFDEAHNIDNVCIEALSVALDRRSITAAHQSLDAISTKVREVKTRDASRLQDEYRRLVAGL--NDGAGGQTDTILANPSLPADVLSEAVPGNIRRAEHFVSFLRTILTHLEQRMISTAENDTVETETPLAFVHRLCGDTHHEIKPLKFAYSRLNSLLRTLEVTSLDQYNPLQDVTDLITLVATYSKGFAIVIEPNGSIIPGVYEPTLQLACLDASIAIKPVFERFSSVIITSGTLSPLDLYPRLLNFQPVIRVSLDMSVFRTPICPLVITQGSDQAQISTRFEVRDEPGVVRNYGALLLDLA 575
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: A0A7S2D9H7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D9H7_9STRA) HSP 1 Score: 527 bits (1357), Expect = 6.690e-178 Identity = 258/390 (66.15%), Postives = 316/390 (81.03%), Query Frame = 1 Query: 4 GGLQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGGAEGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRV----RVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 1161 G ++ C+FYE+YD+ GSDA +P GI+SL+DLKV GR++ WCPYFLARHVINHA VLVYNYQYMLDPKVAG+VSRELE+ESVV+FDEAHNIDNVC EALSV LDRR + AA + L +S++V +K D +RL EY RLV GL ++ G + +LANP+LPAD+L EAVPGNIRRAEHFV+F+R I+ HL+ R+ VE+ETPLAF+HRL T E KPL+FAYSRLNSLLRTLE+T LD+YNPLQ V D TLV+TY GFA+V EPNGS+IPGVYEP +QL CLD+S+AIKPV ERF SVIITSGTLSP+DLYP+LL F PV+R SL MS FR ICPLV+T+GSDQ +ST+F++R++P VVRNYG+LL++LA ++PDG Sbjct: 194 GSVETCDFYEEYDKAGSDAAIPNGIFSLDDLKVLGREKGWCPYFLARHVINHAKVLVYNYQYMLDPKVAGMVSRELESESVVIFDEAHNIDNVCIEALSVALDRRSITAAHQSLDAISTKVREVKTRDASRLQDEYRRLVAGL--NDGAGGQTDTILANPSLPADVLSEAVPGNIRRAEHFVSFLRTILTHLEQRMISTAENDTVETETPLAFVHRLCGDTHHEIKPLKFAYSRLNSLLRTLEVTSLDQYNPLQDVTDLITLVATYSKGFAIVIEPNGSIIPGVYEPTLQLACLDASIAIKPVFERFSSVIITSGTLSPLDLYPRLLNFQPVIRVSLDMSVFRTPICPLVITQGSDQAQISTRFEVRDEPGVVRNYGALLLDLASTIPDG 581
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: A0A5D6XMP7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMP7_9STRA) HSP 1 Score: 514 bits (1325), Expect = 2.370e-174 Identity = 255/398 (64.07%), Postives = 317/398 (79.65%), Query Frame = 1 Query: 10 LQLCEFYEQYD-RNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQV-----GGAEG--------LLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 1161 ++ C FYE+Y+ R G +AV+PPG+Y+++DLK G QR WCPYFL R+ ++ A+V+VYNYQYMLDPKV+ +VSR E ES+VVFDEAHNIDNVC EALSV LDRR LD A R L +S+ V +K +D ARL+AEY RLV GL +A V G A+ LLANP LP D+L EA+PGNIRRAEHF+AFMR+++E+L+TR+RV+NVESETP AFLH L Q +++AKP++F Y+RLNSLLRTLE+T L+E+N L AVADFATLV+TY DGF ++ EP GV++PV+QL CLD+SLAI+PV ERF SV+ITSGTLSPIDLYP+LL FSPVVR SLPMS +R+CICP+V+TRGSDQ+ +STKFDLR+D SVVRNYGSLL+ELA S PDG Sbjct: 153 VETCSFYEKYESRKGDEAVLPPGVYAVDDLKALGAQRGWCPYFLTRYAVSFADVIVYNYQYMLDPKVSAMVSRTFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISAHVARVKQADTARLDAEYRRLVEGLRSSDAVVAPTYMGAADRPIDTANDLLLANPVLPDDVLAEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLHQAIAMDAKPMKFCYTRLNSLLRTLEVTNLEEFNSLTAVADFATLVATYADGFMLIIEPFDGT-SGVHDPVLQLACLDASLAIRPVFERFASVVITSGTLSPIDLYPRLLNFSPVVRESLPMSVYRSCICPMVITRGSDQMPVSTKFDLRDDMSVVRNYGSLLLELAASCPDG 549
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: A0A2P4X6T2_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X6T2_9STRA) HSP 1 Score: 506 bits (1304), Expect = 1.560e-173 Identity = 254/399 (63.66%), Postives = 310/399 (77.69%), Query Frame = 1 Query: 10 LQLCEFYEQYD-RNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGGA--------------EGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 1161 ++ C FYE YD R D V+P G+YS+EDLK G Q+ WCPYFL R+V+ A+V+VYNYQYMLDPKV+ LVSR E ES+VVFDEAHNIDNVC EALSV LDRR LD A R L LSSQVN LK +D++RL+AEY RLV GL NA V + L+ANP LP D+L EA+PGNIRRAEHFVAFMR+++E+L+ R+RV+ VESETP AFLH L Q ++E KP++F Y+RLNSLLRTLE+T L+EYN L VADFATLV+TY +GF ++ EP S GV++PV+QL+CLD+SLAI+PV ERF SVIITSGTLSPIDLYP+LL F+PV+R SLPMS +R+ ICPLV+TRGSDQ+ +STKFDLR+D SVVRNYG+LL+E+A PDG Sbjct: 157 VETCSFYENYDARKSDDTVLPSGVYSVEDLKEIGAQKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVNKLKQADKSRLDAEYRRLVEGLRSSNAVVAPTYTDPTTNNAIDTANDILIANPVLPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDG 554
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: A0A7R9U4D1_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4D1_9STRA) HSP 1 Score: 516 bits (1328), Expect = 6.160e-173 Identity = 254/391 (64.96%), Postives = 312/391 (79.80%), Query Frame = 1 Query: 1 GGGLQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGG----AEGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 1161 G ++LCEFYEQYD NG+D +P GIYSLEDL+ GR+R WCPYFLARHV+ HANVL+YNYQYMLDPKVAGLVS ELE +SVVVFDEAHNIDNVC EA+SV + R LDA+ R LG L+S+V +KASD RLNAEY RLV+GLA G + +L+NP+LPADIL E+VPGNIR+AEHF+ FMRKIV HLK ++R + ETP AFLH+L + T LEAKP++F YSRLNSLLRTLE+T LD+++ L +ADFATL++TY++GFAVV EP+ S+IPG+ EPV++L+CLD+SLAIKPV +RF+SVIITSGTLSPIDLYP++L FSPVV +SLPMS FR+ ICPL+VTRG + MS+ F +R D V+ NYG LLV+ VPDG Sbjct: 193 GASVELCEFYEQYDANGTDTAIPYGIYSLEDLRDLGRERGWCPYFLARHVLKHANVLIYNYQYMLDPKVAGLVSSELEEDSVVVFDEAHNIDNVCIEAMSVQISRPILDASTRSLGALASKVEEMKASDVERLNAEYQRLVSGLAMSGPAPGSYTVATDSILSNPSLPADILAESVPGNIRKAEHFLTFMRKIVRHLKDQLRNPEAKWETPQAFLHQLHEMTGLEAKPMKFTYSRLNSLLRTLEVTSLDDHSDLAEIADFATLLATYQEGFAVVLEPDSSIIPGLTEPVLELSCLDASLAIKPVFKRFKSVIITSGTLSPIDLYPRILDFSPVVSSSLPMSIFRSSICPLIVTRGDNMTKMSSAFGVRNDDRVISNYGKLLVDTCRIVPDG 583
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: H3G8C6_PHYRM (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8C6_PHYRM) HSP 1 Score: 510 bits (1314), Expect = 7.080e-173 Identity = 251/386 (65.03%), Postives = 311/386 (80.57%), Query Frame = 1 Query: 10 LQLCEFYEQYD-RNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGGAEGLL-ANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 1161 ++ C FYE+YD R D V+PPG+YS++DLK G Q+ WCPYFL R+V+ A+V+VYNYQYMLDPKV+ LVSR E ES++VFDEAHNIDNVC EALSV LDRR LD A R L LSSQV+ LK +D+A+L+AEY RLV GL +A V ++ ANP LP D+L EA+PGNIRRAEHFVAFMR+++E+L+ R+RV+ VESETP AFLH L Q S+E KP++F Y+RLNSLLRTLE+T L+EYN L VADFATLV+TY DGF ++ EP S GV++PV+QL+CLD+SLAI+PV ERF SV+ITSGTLSPIDLYP+LL F+PV+R SLPMS +R+ ICPLV+TRGSDQ+ +STKFDLR+D SVVRNYG+LL+E+A PDG Sbjct: 156 VETCSFYEKYDARKSDDTVLPPGVYSVDDLKDLGVQKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIIVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVSKLKQADKAKLDAEYRRLVEGLRSSDAVVAPTHDIMIANPVLPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAISMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLADVADFATLVATYADGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDG 540
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Match: K3WFP6_GLOUD (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFP6_GLOUD) HSP 1 Score: 511 bits (1315), Expect = 7.380e-173 Identity = 252/401 (62.84%), Postives = 316/401 (78.80%), Query Frame = 1 Query: 4 GGLQLCEFYEQYDRNGSD-AVMPPGIYSLEDLKVFGRQRTWCPYFLARHVINHANVLVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVTLDRRGLDAAGRCLGKLSSQVNNLKASDQARLNAEYARLVNGLAQDNAQVGGA--------------EGLLANPALPADILQEAVPGNIRRAEHFVAFMRKIVEHLKTRVRVQNVESETPLAFLHRLQQQTSLEAKPLRFAYSRLNSLLRTLEITGLDEYNPLQAVADFATLVSTYKDGFAVVTEPNGSVIPGVYEPVMQLTCLDSSLAIKPVLERFQSVIITSGTLSPIDLYPKLLGFSPVVRASLPMSTFRACICPLVVTRGSDQLAMSTKFDLREDPSVVRNYGSLLVELAGSVPDG 1161 G +++C FYE Y+ SD V+P GIY+++DLK G Q+ WCPYFL R+V++ A+V+VYNYQYMLDPKV+ +VSR E ES+VVFDEAHNIDNVC EALSV LDRR LD A R L +SSQVN +K +D+ARL+AEY RLV GL +A V + L+ANP LP D+L EA+PGNIRRAEHF+AFMR+++E+L+TR+RV+NVESETP AFLH L Q S+E KP++F Y+RLNSL+RTLE+T L+E+N L AVADFATLV+TY DGF ++ EP GV++PV+QL CLD+SLAI+PV ERF SVIITSGTLSPIDLYP+LL F+PV+R SLPMS +R+CICP+V+TRGSDQ+ +STKFDLR+D SVVRNYG+LL+E+A S PDG Sbjct: 150 GEVEVCSFYENYESRKSDETVLPAGIYNVDDLKELGVQKGWCPYFLTRYVVSFADVIVYNYQYMLDPKVSAMVSRSFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISSQVNRMKQADKARLDAEYRRLVEGLRSSDAVVAPTYTNPNTQQHIDTSNDILMANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAISMETKPMKFCYTRLNSLMRTLEVTNLEEFNSLAAVADFATLVATYADGFMLIIEPYDGQ-SGVHDPVLQLACLDASLAIRPVFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSCICPMVITRGSDQMPVSTKFDLRDDMSVVRNYGTLLLEMAASCPDG 549 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9695.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9695.1.1 >prot_P-wetherbeei_contig9695.1.1 ID=prot_P-wetherbeei_contig9695.1.1|Name=mRNA_P-wetherbeei_contig9695.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=387bp GGGLQLCEFYEQYDRNGSDAVMPPGIYSLEDLKVFGRQRTWCPYFLARHVback to top mRNA from alignment at P-wetherbeei_contig9695:2..2337- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9695.1.1 ID=mRNA_P-wetherbeei_contig9695.1.1|Name=mRNA_P-wetherbeei_contig9695.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2336bp|location=Sequence derived from alignment at P-wetherbeei_contig9695:2..2337- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9695:2..2337- >mRNA_P-wetherbeei_contig9695.1.1 ID=mRNA_P-wetherbeei_contig9695.1.1|Name=mRNA_P-wetherbeei_contig9695.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1161bp|location=Sequence derived from alignment at P-wetherbeei_contig9695:2..2337- (Phaeothamnion wetherbeei SAG_119_79)back to top |