mRNA_P-wetherbeei_contig969.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig969.1.1
Unique NamemRNA_P-wetherbeei_contig969.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig969.1.1 vs. uniprot
Match: A0A836CKC4_9STRA (Vacuolar membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKC4_9STRA)

HSP 1 Score: 201 bits (511), Expect = 5.270e-58
Identity = 106/219 (48.40%), Postives = 148/219 (67.58%), Query Frame = 2
Query:  191 QCHLVVGTYALFLQLFLGFAAFLTLFYKRALEEPPRPWLVWFFDSSKQGFGALLVHFWNIGLSVWISMVG-DAFEGAKDECALYFLNFTLDVVVGTFLIWLLLRGQRWLALRWDIAALQRTGDYGKPPSVRVYLAQLVTYLLILLAVKTALAVAVVAALPVLRGAVTALFAPIRQYPDVELTVVMIVCPWMMNTCQFWVLDNVLSHKRVTVNGYDKIEE 844
            QC L+ G +++ LQ  LGFAA  TL YKR LE P RP LVW +D+SKQ  GA LVH WN+ LS+ I+ +  D  + A DECALYF+N+ +D+++GT LIW L++ Q  +A R  + +L+ TG YG PP + VYLAQL+ ++ IL+  KTALA  V+A    +      LF P++ YPD+EL +VMI+CPW +N+ QFW+LD+V+  K    N Y +IE+
Sbjct:   10 QCELLGGAFSIILQGLLGFAALSTLVYKRLLENPRRPILVWLYDTSKQAIGAGLVHAWNMALSIAIAKLRRDQGDDASDECALYFVNYAVDILLGTGLIWGLVQAQVTMAKRLGVGSLRHTGFYGDPPRLSVYLAQLLAFMFILVIQKTALAFLVIALDGQIEVMAEFLFLPLQGYPDLELLIVMILCPWCLNSVQFWILDSVVMFKVSDANAYKQIED 228          
BLAST of mRNA_P-wetherbeei_contig969.1.1 vs. uniprot
Match: A0A836CED2_9STRA (Vacuolar membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CED2_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.270e-53
Identity = 97/207 (46.86%), Postives = 142/207 (68.60%), Query Frame = 2
Query:  194 CHLVVGTYALFLQLFLGFAAFLTLFYKRALEEPPRPWLVWFFDSSKQGFGALLVHFWNIGLSVWISMV--GDA----FEGAKDECALYFLNFTLDVVVGTFLIWLLLRGQRWLALRWDIAALQRTGDYGKPPSVRVYLAQLVTYLLILLAVKTALAVAVVAALPVLRGAVTALFAPIRQYPDVELTVVMIVCPWMMNTCQFWVLDNV 796
            CHL+ G +A  LQ  LG AA + L  KR  E P RP++VW++D SKQG+ ALLVH WNI +S+ +++   GDA        +DECALYF+ F LDV++G  L+W+L+R Q  LA R++  +L  +GDYG PP  + ++AQ+  Y+L ++AVKT + + V+A   VL      LFAP+R++P+ ELT+VMI+CPW++N  QFW++DN+
Sbjct:    7 CHLIGGAFANVLQFVLGLAALVGLLVKRQGERPRRPFIVWWYDVSKQGYAALLVHAWNIFMSMALAVRTRGDAAGLGVAAPRDECALYFVQFALDVLLGVALVWVLIRTQERLARRYNWPSLAISGDYGNPPRFQWFVAQMGVYMLSVVAVKTVITLVVLAGDAVLSDVSAVLFAPVREFPEAELTIVMIICPWILNALQFWMMDNM 213          
BLAST of mRNA_P-wetherbeei_contig969.1.1 vs. uniprot
Match: D7G3K9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3K9_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 1.160e-52
Identity = 99/210 (47.14%), Postives = 134/210 (63.81%), Query Frame = 2
Query:  194 CHLVVGTYALFLQLFLGFAAFLTLFYKRALEEPPRPWLVWFFDSSKQGFGALLVHFWNIGLSVWISMVGDAFEGAKDECALYFLNFTLDVVVGTFLIWLLLRGQRWLALRWDIAALQRTGDYGKPPSVRVYLAQLVTYLLILLAVKTALAVAVVAALPVLRGAVTALFAPIRQYPDVELTVVMIVCPWMMNTCQFWVLDNVLSHKRVTVN 823
            CHL+   YA  LQ  LGFAA   L +KR      R  +VW +D SKQGFGA+ +H WNI LS+     G    G+ DECA+YF+NF+LD+ +GTF+IW  +R Q   A+R  I +L+ TGDYG PP   VY  QL+ Y +IL+  K      V+A   VL     ALF+P+  YP++ELT+VMI+CPW++N  QFW+LDNVL  ++V ++
Sbjct:   19 CHLISENYAYALQFILGFAALAGLVFKRWRAPVKRDLVVWMYDVSKQGFGAMFIHVWNILLSIH---EGGGIPGS-DECAMYFVNFSLDIAIGTFMIWCFVRVQELTAVRCGIDSLKVTGDYGTPPLFSVYRTQLLAYTVILVICKAVTTAIVIAMDEVLSSLAKALFSPVSAYPELELTLVMIICPWILNALQFWILDNVLMSEKVMLD 224          
BLAST of mRNA_P-wetherbeei_contig969.1.1 vs. uniprot
Match: A0A835YS54_9STRA (Vacuolar membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS54_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.610e-47
Identity = 96/212 (45.28%), Postives = 137/212 (64.62%), Query Frame = 2
Query:  182 EDDQCHLVVGTYALFLQLFLGFAAFLTLFYKRALEEPPRPWLVWFFDSSKQGFGALLVHFWNIGLSVWISMVG-----DAFEGAKDECALYFLNFTLDVVVGTFLIWLLLRGQRWLALRWDIAALQRTGDYGKPPSVRVYLAQLVTYLLILLAVKTALAVAVVAALPVLRGAVTALFAPIRQYPDVELTVVMIVCPWMMNTCQFWVLDNVLS 802
            E ++C L+ GTYA  LQ  LG AA   L             LVW +D SKQG+GAL VHFWNI +S+ ++ +      DA E  +D CALYF+ F LD+++G  +IW ++R Q WLA R ++ +L  +GDYG PP V+ +  QL  Y++ LL +KT ++  VVA   +L    T LF+P+ ++PDVELT+VMIVCPW++N  QFW++DN++S
Sbjct:    5 EAERCRLIGGTYANVLQFVLGIAALTGL-------------LVWIYDVSKQGYGALFVHFWNIVMSMILADLSRRANADAVE--RDACALYFVQFVLDMMLGMVMIWAMVRTQEWLAERCNVPSLAVSGDYGNPPKVQWFWHQLGAYMMSLLIIKTIISTVVVAEDRILSRLSTWLFSPVAKHPDVELTIVMIVCPWILNALQFWIMDNMVS 201          
BLAST of mRNA_P-wetherbeei_contig969.1.1 vs. uniprot
Match: A0A7S3XVW9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVW9_HETAK)

HSP 1 Score: 167 bits (423), Expect = 4.140e-45
Identity = 92/219 (42.01%), Postives = 137/219 (62.56%), Query Frame = 2
Query:  176 SAEDDQCHLVVGTYALFLQLFLGFAAFLTLFYKRALEEPPRPWLVWFFDSSKQGFGALLVHFWNIGLSVWIS--MVGDAFEGAK-DECALYFLNFTLDVVVGTFLIWLLLRGQRWLALRWDIAALQRTGDYGKPPSVRVYLAQLVTYLLILLAVKTALAVAVVAALPVLRGAVTALFAPIRQYPDVELTVVMIVCPWMMNTCQFWVLDNVLSHKRVTVN 823
            +A+  QC LV G +A+ +Q+ L   A  +L  KR LE P RPW +WFFD SKQGFGA  VH WN+ L+  +S  M  D     K D+C+LY ++ ++D+ +GT  I+ LL+ QR LA R     L+  G YG PPS +VYL QL  Y L+LL  KT  AV +++    L    T +F+P++ YP +EL VVM++ P ++N  Q+W++DN+L  +++ ++
Sbjct:   11 AADTPQCELVAGLFAICMQVALAAVAVSSLVGKRFLERPRRPWRIWFFDVSKQGFGAGFVHCWNLVLATILSAVMADDPLASTKQDQCSLYAMSLSIDIFLGTVWIYFLLKAQRALADRHGWEDLKHPGVYGSPPSTKVYLVQLWGYFLVLLTYKTLNAVIILSWRHHLDSFYTWVFSPLQPYPKLELVVVMVLLPGVLNVMQYWIVDNILKGEKIAIH 229          
BLAST of mRNA_P-wetherbeei_contig969.1.1 vs. uniprot
Match: T0QSN5_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QSN5_SAPDV)

HSP 1 Score: 164 bits (414), Expect = 1.230e-43
Identity = 88/215 (40.93%), Postives = 134/215 (62.33%), Query Frame = 2
Query:  182 EDDQCHLVVGTYALFLQLFLGFAAFLTLFYKRALEEPPRPWLVWFFDSSKQGFGALLVHFWNIGLSVWISMVGDAFEGAKDECALYFLNFTLDVVVGTFLIWLLLRGQRWLALRWDIAALQRTGDYGKPPSVRVYLAQLVTYLLILLAVKTALAVAVVAALPVLRGAVTALFAPIRQYPDVELTVVMIVCPWMMNTCQFWVLDNVLSHKRVTVNG 826
            ++DQC L+   +A F+Q+ LGF A   L+ KR LE+P R + VW +D SKQG GAL++H  NI LS++++   D    + DECA+YF+ F +D  +GT L+ +LLR  + LA R    ++ R+G+YG PP+ R++L QL+ Y+++LL +K  + + +  A   L    T+ FA   ++  +EL +VMI+ P  +N  QFWVLDNVL     T  G
Sbjct:    9 DEDQCLLLTDGFARFIQVLLGFCAMGVLYVKRELEQPKRSFNVWTYDVSKQGIGALMIHMLNILLSIFLTRRADV---SDDECAIYFMTFLIDATLGTLLVLILLRQMKKLATRLQWTSIMRSGEYGDPPNFRIWLKQLLAYVVLLLTMKCLVILLMYTAYKQLAAIATSAFAVFARHRHLELVLVMILGPCAINVIQFWVLDNVLKTTTTTAKG 220          
BLAST of mRNA_P-wetherbeei_contig969.1.1 vs. uniprot
Match: W2PXY3_PHYPN (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2PXY3_PHYPN)

HSP 1 Score: 161 bits (408), Expect = 3.590e-42
Identity = 88/210 (41.90%), Postives = 129/210 (61.43%), Query Frame = 2
Query:  182 EDDQCHLVVGTYALFLQLFLGFAAFLTLFYKRALEEPPRPWLVWFFDSSKQGFGALLVHFWNIGLSVWISMVGDAFEGAK---DECALYFLNFTLDVVVGTFLIWLLLRGQRWLALRWDIAALQRTGDYGKPPSVRVYLAQLVTYLLILLAVKTALAVAVVAALPVLRGAVTALFAPIRQYPDVELTVVMIVCPWMMNTCQFWVLDNVLS 802
            E+ +C L+ G +A+ LQ+ LGF A   L +KR  E P RP +VW FD+SKQ  GA   H  N+ +++ +    +  E  +   D+CALYF+NFTLD  +G FL ++LL     LALR+  ++L+  GDYG P  VR ++ Q++++++++   K  +AV +VA    L      LF P+ +YPDVEL +VMI CP +MN  QFWV DN L 
Sbjct:   11 EEKECKLLSGDFAVLLQVLLGFIAISVLAFKRWREVPRRPLMVWAFDASKQMVGATFAHVANLLIAIVLYSYQEELESDEEPVDQCALYFVNFTLDTTLGVFLNYVLLSAVVLLALRFSWSSLKTPGDYGTPVRVRTWILQVISWIIVIFTCKFLIAVLIVAFQKPLGAFAVLLFKPLEEYPDVELAIVMIACPCLMNALQFWVQDNFLK 220          
BLAST of mRNA_P-wetherbeei_contig969.1.1 vs. uniprot
Match: A0A6G0WLM6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLM6_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.420e-40
Identity = 89/215 (41.40%), Postives = 127/215 (59.07%), Query Frame = 2
Query:  182 EDDQ------CHLVVGTYALFLQLFLGFAAFLTLFYKRALEEPPRPWLVWFFDSSKQGFGALLVHFWNIGLSVWISMVGDAFEGAKDECALYFLNFTLDVVVGTFLIWLLLRGQRWLALRWDIAALQRTGDYGKPPSVRVYLAQLVTYLLILLAVKTALAVAVVAALPVLRGAVTALFAPIRQYPDVELTVVMIVCPWMMNTCQFWVLDNVLSHK 808
            ED+Q      C L+ G +  F+Q+ LG  A   L  KR +E P RP  +W FD+SKQ  GA + H  N+ ++  I++VG + E + DECA+YF+NFTLD  +G  L WL LR    LA R+   ALQ  GDYG P  VRV++ QL+ +L+I+++ K  +   ++     L      +F P+ Q+P VEL +VM+ CP +MN  QFWV D+ L  K
Sbjct:    2 EDEQGLQHPKCTLLSGPFESFVQVLLGLIAMSVLIVKRYVERPRRPMRIWLFDASKQAIGAGVAHIANVTIA--IALVGFSEENSTDECAMYFINFTLDTSIGVLLNWLFLRLLVLLARRFKWTALQTPGDYGDPVRVRVWIIQLLAWLIIIVSAKLVIGRFIILFQHSLVEFAHGMFQPLEQHPRVELVLVMVACPCLMNALQFWVQDSFLKRK 214          
BLAST of mRNA_P-wetherbeei_contig969.1.1 vs. uniprot
Match: A0A485KPT3_9STRA (Aste57867_9920 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPT3_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.610e-40
Identity = 90/209 (43.06%), Postives = 124/209 (59.33%), Query Frame = 2
Query:  185 DDQCHLVVGTYALFLQLFLGFAAFLTLFYKRALEEPPRPWLVWFFDSSKQGFGALLVHFWNIGLSVWISMVGDAFEGAKDECALYFLNFTLDVVVGTFLIWLLLRGQRWLALRWDIAALQRTGDYGKPPSVRVYLAQLVTYLLILLAVKTALAVAVVAALPVLRGAVTALFAPIRQYPDVELTVVMIVCPWMMNTCQFWVLDNVLSHKR 811
            D +C LV G +   +Q+FLG  A   L  KR  E P RP  VW FD+SKQ  GA + H  NI ++  I +VG +  G  DECA+YF+NFTLD   G  L WLLLR    +A R+   ALQ  G+YG P  +RV+LAQL+T+L+I++  K  +   ++     L    + +F P+  YP VEL +VM+ CP +MN  QFW+ D+ L  K+
Sbjct:    8 DGKCTLVSGPFESIVQVFLGMIAMSVLAVKRYAERPRRPMGVWIFDASKQAIGAGVAHIANIVIA--ILLVGYSENGETDECAMYFINFTLDTSFGVVLNWLLLRLLVRVANRFQWTALQVPGEYGDPIKIRVWLAQLLTWLVIIITAKLIIGRGIIEFKDTLVQIASWIFKPLVNYPRVELVIVMVACPCLMNGLQFWIQDSFLKKKQ 214          
BLAST of mRNA_P-wetherbeei_contig969.1.1 vs. uniprot
Match: M4BF34_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BF34_HYAAE)

HSP 1 Score: 155 bits (391), Expect = 9.010e-40
Identity = 89/216 (41.20%), Postives = 125/216 (57.87%), Query Frame = 2
Query:  167 QQLSAEDDQCHLVVGTYALFLQLFLGFAAFLTLFYKRALEEPPRPWLVWFFDSSKQGFGALLVHFWNIGLSVWISMVGDAFEGAK----DECALYFLNFTLDVVVGTFLIWLLLRGQRWLALRWDIAALQRTGDYGKPPSVRVYLAQLVTYLLILLAVKTALAVAVVAALPVLRGAVTALFAPIRQYPDVELTVVMIVCPWMMNTCQFWVLDNVLS 802
            +Q  A   +C L+ G +A  LQ+ LG  A   L  KR  E P RP LVW  D+SKQ  GA   H  N+ +++ +     + E A+    D+CALYF+NFTLD   G  L + LL G  +LALR   +ALQ TGDYG P  VR +L Q++++++++   K  +A  ++A    L      LF P+ +YPDVEL +VMI CP +MN  QFW+ D+ L 
Sbjct:    4 EQKVAPGQECKLLDGEFAALLQVLLGLIALSVLILKRLREVPRRPLLVWALDASKQLIGATFAHVANLVIALLLYSHQRSIEKAESATVDQCALYFVNFTLDTTFGVVLNYFLLSGLAFLALRLSWSALQTTGDYGMPVQVRTWLLQVLSWIVVIFTCKMMIAAVILAFQQPLGALAVLLFKPLEKYPDVELVLVMIACPCLMNAVQFWIQDSFLK 219          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig969.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKC4_9STRA5.270e-5848.40Vacuolar membrane protein-domain-containing protei... [more]
A0A836CED2_9STRA2.270e-5346.86Vacuolar membrane protein-domain-containing protei... [more]
D7G3K9_ECTSI1.160e-5247.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YS54_9STRA1.610e-4745.28Vacuolar membrane protein-domain-containing protei... [more]
A0A7S3XVW9_HETAK4.140e-4542.01Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
T0QSN5_SAPDV1.230e-4340.93Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
W2PXY3_PHYPN3.590e-4241.90Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]
A0A6G0WLM6_9STRA1.420e-4041.40Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KPT3_9STRA2.610e-4043.06Aste57867_9920 protein n=1 Tax=Aphanomyces stellat... [more]
M4BF34_HYAAE9.010e-4041.20Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig969contigP-wetherbeei_contig969:907..4611 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G3K9
Preferred nameTMEM110
PFAMsMustang,STIMATE
Model size1521
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005246,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005938,GO:0007154,GO:0007165,GO:0008150,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0010959,GO:0012505,GO:0016020,GO:0016021,GO:0016247,GO:0019722,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0023056,GO:0031090,GO:0031224,GO:0031984,GO:0032237,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032541,GO:0032879,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035556,GO:0035584,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043270,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050848,GO:0050850,GO:0050896,GO:0051049,GO:0051050,GO:0051716,GO:0051924,GO:0051928,GO:0065007,GO:0065009,GO:0070884,GO:0070886,GO:0071782,GO:0071944,GO:0098588,GO:0098772,GO:0098805,GO:0098827,GO:0098852,GO:0099106,GO:0099568,GO:0106056,GO:0106058,GO:1901019,GO:1901021,GO:1901339,GO:1901341,GO:1902531,GO:1902533,GO:1903169,GO:1904062,GO:1904064,GO:1904427,GO:2001257,GO:2001259
Exons5
Evalue6.72e-57
EggNOG OGs2BJXQ@1|root,2S1HE@2759|Eukaryota
Descriptionactivation of store-operated calcium channel activity
Cds size705
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig969.1.1prot_P-wetherbeei_contig969.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig969 1052..3940 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187105.641971-UTR-P-wetherbeei_contig969:906..10511683187105.641971-UTR-P-wetherbeei_contig969:906..1051Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig969 907..1051 +
1683187105.7092257-UTR-P-wetherbeei_contig969:3940..46111683187105.7092257-UTR-P-wetherbeei_contig969:3940..4611Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig969 3941..4611 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187105.6545055-CDS-P-wetherbeei_contig969:1051..12401683187105.6545055-CDS-P-wetherbeei_contig969:1051..1240Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig969 1052..1240 +
1683187105.6651611-CDS-P-wetherbeei_contig969:1669..17641683187105.6651611-CDS-P-wetherbeei_contig969:1669..1764Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig969 1670..1764 +
1683187105.6756454-CDS-P-wetherbeei_contig969:2443..26131683187105.6756454-CDS-P-wetherbeei_contig969:2443..2613Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig969 2444..2613 +
1683187105.6858602-CDS-P-wetherbeei_contig969:3364..35191683187105.6858602-CDS-P-wetherbeei_contig969:3364..3519Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig969 3365..3519 +
1683187105.6980748-CDS-P-wetherbeei_contig969:3844..39401683187105.6980748-CDS-P-wetherbeei_contig969:3844..3940Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig969 3845..3940 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig969.1.1

>prot_P-wetherbeei_contig969.1.1 ID=prot_P-wetherbeei_contig969.1.1|Name=mRNA_P-wetherbeei_contig969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=235bp
MELMIPRQQLSAEDDQCHLVVGTYALFLQLFLGFAAFLTLFYKRALEEPP
RPWLVWFFDSSKQGFGALLVHFWNIGLSVWISMVGDAFEGAKDECALYFL
NFTLDVVVGTFLIWLLLRGQRWLALRWDIAALQRTGDYGKPPSVRVYLAQ
LVTYLLILLAVKTALAVAVVAALPVLRGAVTALFAPIRQYPDVELTVVMI
VCPWMMNTCQFWVLDNVLSHKRVTVNGYDKIEEF*
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mRNA from alignment at P-wetherbeei_contig969:907..4611+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig969.1.1 ID=mRNA_P-wetherbeei_contig969.1.1|Name=mRNA_P-wetherbeei_contig969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3705bp|location=Sequence derived from alignment at P-wetherbeei_contig969:907..4611+ (Phaeothamnion wetherbeei SAG_119_79)
CGCCGAAAAGGCAACCCGCTCGTCCGCGTCCTGCTCCAGAGCCTGACGCG AAACCTGAATCATCTCGCATAAAATACTTCGTGGAACCGAGGCGGCGGCG CTGCAATACGGCCAATCGAGTGTTCCGACACTGCGACCTCACTCGATGGA ACTGATGATCCCAAGACAGCAGTTATCGGCTGAGGATGACCAGTGTCATC TAGTCGTCGGCACATACGCACTATTTCTGCAGCTATTTTTAGGTTTCGCG GCGTTTCTGACCCTCTTCTATAAACGAGCTCTGGAGGAGCCGCCAAGACC ATGGCTGGTGTGGTTCTTTGATTCGTCAAAGCAGGTGCGTGGAATAGAGC GGGCAAGACGCTGTTCAGGATGTGCTGATTTGCTCTGTTCGCATTGGCAC CTTTTAAAAACCAATGACAAGCACGACACGCACTCGCTTCATAACACACA CGACGCGACTCTTCCCCTGCGGTTTTGTGATTGTGAGATTTGCGAGGCAG CAATCGACCGAGGGCGTAGGCTGCAAGGATGCCTCGGTTTTCAGTCCCAC TTCGATCCTTTTACGTTTTAAGATGGCATAGCTGTACCATCAGGTAACCG GTATGGAAACGTCTGCGCATTCCGTTGCGCATCCACCCGTCCCCATCAGC ATGCGGCGGGCGCCGCCGCGACTCACAGCTGCCGACCGCTGTTTGGAACT TGATTCTTGTTGCATCTTCTCCGTCTGAAACTCTTTCGATGTTCCAATTT TCCCGCTCCGCAGGGCTTTGGGGCGCTGCTGGTGCACTTTTGGAACATCG GGCTGTCCGTGTGGATATCGATGGTAGGGGATGCATTTGAGGGTGCAAAG GACGAATGGTGAGTCAGAATTTGTTCGATTGGGCGACTGTTCTCAGTCGG ACGGGCCGAATGATCAGCCCTTTTTCGGTGACATGATTGCCGTTCGCTGG TTTTTCATGTTGATGCGGAGCGGCTTTGGCCCGAATTGCATTGACGTTGA GTACCAAGTAGATGTTCAGAGGAAGGCCAGGAAAGTACGTGAAGGCCATG GCTCTTACCCGTCCCCTTTTGCGCGTTCCGGATTCGGAGTCATCCGGTGG CGCTCAGCTCGGCACGTCGGTGTTCACGGCTGCGATACCTGTTTGATCGT CGGGGCCATTTTCTTCAGGCGGATATTTTAGTTTTTTCTGTGTTTGGTTC TGATCCCCCCTTCCGTTTCGGTCTTCTGCCGGTAAAGGGATTGGCAGCGC AGGCTGACGCCGGTGCGGCACCAGGAACGTTCGACACCCTTTTTTTGTCT CCGGTGTAGGATGGTAGAGAGTAAAGCTCGCGATTGGCATCTGCCATCGG CAGGCAGACATCCGCACCAATCCGCACACATCCCGTCTTCCTCGCCTTCC TGTGTCGCCCGTTTCCTGCCTCTCTTTCGCGGCACCATCTGCTGGGGCGG CGCTGGCGGGCGACGGCGGTTGGCGGCGGCGGCGTGCGGCGGCGGCACAA CGAAAACCCAAAACCAAACAACATTGACAAACGGCAGCGCGCTCTACTTT CTGAATTTCACGCTGGACGTGGTGGTTGGGACCTTCCTCATCTGGCTACT GCTGCGGGGCCAGCGGTGGCTGGCGCTCCGCTGGGACATAGCGGCGCTGC AGCGGACGGGCGACTACGGCAAGCCGCCGTCCGTCAGAGTCTACCTGGCG CAGCTCGGTGGGTGGTTTCGGCGGTTACATCGTTAAGCTTTCCCGTTTCT CTTCGATTGCATCTTTGATTACTTTTCCTATTTCGATTCCATTTTCGGTT GCTGGATTGGCGTTTTGCTGAGTCCTTCGGCGTTTCAGCAGTGATATCTA TCGGTTGAATCTGTGTGCGACGTGCGTCCTCTCAGCGCGCTTGAATTTTC GGCAAGCCGCCGTCCGTCAAGGTCTACCTGCCCGGCTGGGTGGGTTGTCC TCGGCGGTTTTACATCTCTTGCCGTTTCGGTTATGTTCCGCGTGTTATCG ATCGCGGTACGTTCAGGTGACGTTGGTTACGCTGCTTGCCTCCTGACTTC TCTCGGTTGCGTTTTGTTTTCGTGGCTGTCTGGTTGTGGGGTGCTCGCTT CCTGTGGCTGAGGGATGACGACAAGCCGCGGTCTGCGGGGGGGAAGTTTG CCTATTCTTATCCTGCTTCGGCCGTGGGTTTTCAGCGTTTGATTATGTCT TTTCTCCCGCTTTTCTCCGATTGCCTCTTCAAAATCTTTGCAAAGAGAGA AATGAGATGTTTGTCTTACGACTCGCTCAGGTCGGGAATGAGCTGTTTCG TTCACAGTGCTCCATTAGCCTCGTCTCATCAAGAAGGAACCCTACCGTTC TACATACTTCAATTCATTTATTCCTCGTCTTTCCGTTTCGCCACCGCATC GTGGTGGTTGTTTCGTCATGCATCTTTTGCTTCTGCTTCTGTCTCTGCTG CCTCGCAGTGACGTACCTGCTCATCCTCCTGGCGGTAAAGACGGCCCTGG CGGTGGCGGTGGTGGCGGCGCTGCCGGTGCTGCGGGGCGCCGTGACGGCC CTCTTCGCGCCAATACGGCAGTACCCGGACGTGGAACTGACGGTCGTCAT GATTGTCTGCCCTGTGAGTTTCTAGTTTCCCAGCATCTCCTTTCTGTTTT CTTCTTTCCGCTTTCCGCTCTCTTTCTTAATATTTTCTATCGGGAAAAGT GTTTCAGCTCCATGTGAACGTTTTGTCCGGAGCTTCGAAAGAGCCGGTGC CGTGGGAAGTCGGCATATGCTGAGAGTGTTGGTGCCTCTTTTCGCTTCAT CTTTTCAAACGTTTTGACCGCACACCCATTTGTCACCCACCCGACCGTTG CCATCGCTGCTGCTGCTGCCTCCACCACAACAATTGCCGCCGCCCCTGCC GCCGCCGTCGCTGCTGCCGCCATCAATTTCTACAACAGTGGATGATGAAT ACGTGCCAGTTCTGGGTGCTCGACAACGTACTGTCGCACAAGCGTGTCAC CGTCAATGGCTACGACAAGATTGAAGAGTTCTGACGCGGCGCTCCGCGGC TCTGACGCGGCGGTTCTGTCGCGACTGCTGCCGGGTGGCCTCCCTTCCAG GCCCGGCTTTTCCACGCGGCTGGATGGGTGGATGGGTGGCGGGAATTTTG GCGCTGCCGCGAAGTAGGAGATCGAGTGGAAGTGAGCCTTTTTTGGCGGT CCCGCCGCCGTCGCAGCTGCCGCTACTGGCGGCGCTGGCGGCGGCGCTGC CATCGGTGGATGCCACCGTCACAGGCGGCGCTGCTGTGGGCGGCGGCTGC CATGTAAATCAGGAGCTGCCGCGGCGCGTCGCGTTCCCGTCGCAGTGGCC GTCACCGTGATCGCCGTCGTCGCGGCCGTCGCTTCGCCCCGCCGCGAGTG GCCCGTTTCCCCTGGAGGCTTGACGGATGTCGCTGGGCCACAGGCGATCT ACTCTTCGGTGCCGGGAGTATCGAGCAGTAATAGGTGCAGTCTCAAACTG TTTTGGGGTGGGAAATGGGGGCGCTGGTGTCTTTTCCCTGGCTGTTCGTT GCTGTACACGAATTATAATATCTGGTGCAAGTGGAAGGGCAGGAGGCGGC AATAGAGAAATACAATATATACCTACCATCACAAGGCACGCGTTCATTCC AGTTTATCCGTCTTTCTGTAAATTGAACGCACTCTGTTTTCCGGGACAAA ACGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig969:907..4611+

>mRNA_P-wetherbeei_contig969.1.1 ID=mRNA_P-wetherbeei_contig969.1.1|Name=mRNA_P-wetherbeei_contig969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=705bp|location=Sequence derived from alignment at P-wetherbeei_contig969:907..4611+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAACTGATGATCCCAAGACAGCAGTTATCGGCTGAGGATGACCAGTG
TCATCTAGTCGTCGGCACATACGCACTATTTCTGCAGCTATTTTTAGGTT
TCGCGGCGTTTCTGACCCTCTTCTATAAACGAGCTCTGGAGGAGCCGCCA
AGACCATGGCTGGTGTGGTTCTTTGATTCGTCAAAGCAGGGCTTTGGGGC
GCTGCTGGTGCACTTTTGGAACATCGGGCTGTCCGTGTGGATATCGATGG
TAGGGGATGCATTTGAGGGTGCAAAGGACGAATGCGCGCTCTACTTTCTG
AATTTCACGCTGGACGTGGTGGTTGGGACCTTCCTCATCTGGCTACTGCT
GCGGGGCCAGCGGTGGCTGGCGCTCCGCTGGGACATAGCGGCGCTGCAGC
GGACGGGCGACTACGGCAAGCCGCCGTCCGTCAGAGTCTACCTGGCGCAG
CTCGTGACGTACCTGCTCATCCTCCTGGCGGTAAAGACGGCCCTGGCGGT
GGCGGTGGTGGCGGCGCTGCCGGTGCTGCGGGGCGCCGTGACGGCCCTCT
TCGCGCCAATACGGCAGTACCCGGACGTGGAACTGACGGTCGTCATGATT
GTCTGCCCTTGGATGATGAATACGTGCCAGTTCTGGGTGCTCGACAACGT
ACTGTCGCACAAGCGTGTCACCGTCAATGGCTACGACAAGATTGAAGAGT
TCTGA
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