mRNA_P-wetherbeei_contig968.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig968.1.1
Unique NamemRNA_P-wetherbeei_contig968.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A6H5KMX5_9PHAE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMX5_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 3.890e-109
Identity = 192/261 (73.56%), Postives = 229/261 (87.74%), Query Frame = 1
Query:    4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPPKLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTS 786
            RPILLKGHER+ITCVVYN DGDL+FTASKD +P LW+A+TGER+GTY     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LVVY+H GPVRSVA+AEGG+RFAT+SDPF +SPG +SV+  P  V   Q +KIA++EI+LPPK+KAT V W ALNEKLIVSY DG IRTFDP  G EL+ AQVHS+ INR+ +NKD+TLLLTSSKDY++KL+D +TL++LKTY+T+RPVNA+V++PTK+HV+LGGGQDAMSVTTTS
Sbjct:    2 RPILLKGHERAITCVVYNNDGDLVFTASKDQIPSLWYAKTGERIGTYQGHQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELVVYNHMGPVRSVAFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLDKIASLEIDLPPKMKATTVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVHSQDINRLCINKDRTLLLTSSKDYTSKLLDANTLQVLKTYKTDRPVNASVMHPTKEHVILGGGQDAMSVTTTS 262          
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: D8LIC2_ECTSI (Eukaryotic initiation factor eIF3 i subunit p36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC2_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 3.150e-106
Identity = 160/275 (58.18%), Postives = 198/275 (72.00%), Query Frame = 1
Query:    4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPPKLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQV----------HSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGRSV 798
            RPILLKGHER+ITCVVYN DGDL+FTA+KD +P LW+A+TGER+GTY                                     +LVVY+H GPVRSV++AEGG+RFAT+SDPF +SPG +SV+  P  V   Q EKIA +EI+LPPK+KAT+V W ALNEKLIV+Y DG IRTFDP  G EL+ AQV          HSK INR+ +NKD+TLLLT SKDY++KL+D +TL++LKTY+T+RPVNA+V++PTK+HV+LGGGQDAMSVTTTS   V
Sbjct:    2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVAYADGTIRTFDPFDGTELEYAQVGTRQGRSSGVHSKDINRLCINKDRTLLLTCSKDYTSKLLDANTLQVLKTYKTDRPVNASVMHPTKEHVILGGGQDAMSVTTTSSNVV 276          
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A835ZF13_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF13_9STRA)

HSP 1 Score: 308 bits (790), Expect = 1.580e-101
Identity = 150/263 (57.03%), Postives = 188/263 (71.48%), Query Frame = 1
Query:    4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPPKLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGR 792
            RPILLK HER+ITCV+YN DGDL+FTA+KD+VP +W A+TGER+GTY                                      LV Y HRGPVRSV WAEGG++F + S PF++SPG++S+Y TP+ VDPSQY+++A+ EI +P K K T V WSALN++++ S+EDG IR FDP TG  L  +  HSK I+R++L+ D+TLLLT SKDY+AKL+D DTLE+LK Y TERPVNAAVI+PTKDH+LLGGGQDAMSVTTT  R
Sbjct:    2 RPILLKSHERAITCVIYNADGDLVFTAAKDNVPTVWRADTGERLGTYIGHSGAVWELSCRWDSKYLLSASADATVRLWDVQTGESLVSYPHRGPVRSVCWAEGGQKFVSASQPFMDSPGFISIYDTPSDVDPSQYQQVASREISIPNKEKCTEVLWSALNDRILASFEDGTIRVFDPETGELLSTSTPHSKPISRMYLSTDRTLLLTCSKDYTAKLLDADTLEVLKVYPTERPVNAAVIHPTKDHILLGGGQDAMSVTTTGSR 264          
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A7S2NVM0_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NVM0_9STRA)

HSP 1 Score: 271 bits (693), Expect = 8.000e-87
Identity = 140/268 (52.24%), Postives = 173/268 (64.55%), Query Frame = 1
Query:    4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPP-----KLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGR 792
            RPILLKGHERSIT V YN DGDL+FTASKDHVP +W AE G R+GT+N                                     +  Y HRGPVR VAWA GG+ FATISDPFVE PGY+SV+  P    P Q+ +   +EIELP      ++ AT V W  LNE + V++++G IR +DP  G EL+  Q H K INR+  N++KT+ +TSS D++AKL D   LE LKTYQT+RPVN AVI+PTKDH+LLGGGQ+AMSVTTT+G+
Sbjct:    2 RPILLKGHERSITVVKYNRDGDLLFTASKDHVPSVWRAEDGSRLGTFNGHKGTIWDLDSDSTTTYLLSASADTTVKLWSICDGQIIRDYPHRGPVRGVAWAAGGQMFATISDPFVEHPGYISVFAVPKSESPEQWSEKPILEIELPKNNKGQRVNATNVVWLNLNEAIFVTFDNGCIRLYDPENGEELEEIQPHEKKINRVSFNRNKTMFITSSADFTAKLYDVVELEHLKTYQTDRPVNDAVISPTKDHILLGGGQEAMSVTTTAGK 269          
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A7S1DBX8_CYCTE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBX8_CYCTE)

HSP 1 Score: 255 bits (652), Expect = 1.360e-80
Identity = 148/268 (55.22%), Postives = 188/268 (70.15%), Query Frame = 1
Query:    4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPP-----KLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGR 792
            RP+LLKGHERSITCV YN DGDL+FTASKDH P +W AE G+R+GT+N                 XXXXXXXXXXXXXXXXXX     Y+HRGPVR VAW+EGG  FATISDPFV+    +SV+ +P G  PSQY +   +EI+LP      ++  T + W  LNE L+V +++G IR +DP TG E++    H K INR+  N +KTL +TSS D+++KL D   ++  KTY+T+RPVN AV++ TKDH+LLGGGQ+AMSVTTTSG+
Sbjct:    1 RPVLLKGHERSITCVKYNYDGDLLFTASKDHTPSVWRAEDGDRLGTFNGHKGTIWDLDCDRFTERXXXXXXXXXXXXXXXXXXXXXKTYTHRGPVRGVAWSEGGHMFATISDPFVDHNAKISVFDSPRGEHPSQYPEAPRLEIDLPKDHSNKRVNPTNIDWMPLNESLMVCFDNGTIRLYDPHTGDEMEEIVAHDKKINRVRFNLEKTLFITSSADFTSKLFDVVDMKHHKTYKTDRPVNDAVLSETKDHILLGGGQEAMSVTTTSGK 268          
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A6U3VY90_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Thalassiosirales TaxID=33847 RepID=A0A6U3VY90_9STRA)

HSP 1 Score: 254 bits (650), Expect = 3.170e-80
Identity = 149/268 (55.60%), Postives = 180/268 (67.16%), Query Frame = 1
Query:    4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPP-----KLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGR 792
            RPILLKGHERSIT V +N DGDL+FTASKDH+P +W  E GER+GT+N                    XXXXXXXXXXXXXXX     + H GPVR  AWA+G   FATISDPFVE    +SVY  P   DPS Y     +EI+LP      ++ AT + W  LNE L V++++G+IR +DPATG EL     H K INR+  N DKTL +TSS D++AKL D   L+ LKTY+T+RPVN AVI+ TKDH+LLGGGQ+AMSVTTTSG+
Sbjct:    2 RPILLKGHERSITVVKFNFDGDLLFTASKDHIPSVWRNENGERIGTFNGHKGTIWDLDVCRFSKRVVTXXXXXXXXXXXXXXXXXXXXFVHHGPVRGAAWADGSNMFATISDPFVEHNAQISVYDVPENDDPSSYSDSPRLEIDLPKTSDGKRVNATNIVWLNLNEALFVTFDNGSIRLYDPATGEELDEFYPHEKKINRVSFNSDKTLFITSSADFTAKLYDVVDLKHLKTYKTDRPVNDAVISETKDHILLGGGQEAMSVTTTSGK 269          
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A7S2I7B8_9STRA (Eukaryotic translation initiation factor 3 subunit I n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2I7B8_9STRA)

HSP 1 Score: 253 bits (646), Expect = 1.390e-79
Identity = 148/267 (55.43%), Postives = 183/267 (68.54%), Query Frame = 1
Query:    4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPP-----KLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSG 789
            RPILLKGHERSIT V YN DGDL+FTASKDHVP +W AE+G+R+GT+                     XXXXXXXXXXXXXXX  + V+SHRGPVR VAWA+G   FATISDPFV+    +S+Y  P    PS Y+    +EI+LP      ++  T + W  LNE L V++++G+IR +D  TG EL+    H K INR+  N++KTL +TSS D++AKL D   L  LKTY+TERPVN AVI+PTKDH+LLGGGQ+AMSVTTT G
Sbjct:    2 RPILLKGHERSITVVKYNYDGDLLFTASKDHVPSVWRAESGDRLGTFAGHKGTIWDLDVDRFSTRVLTXXXXXXXXXXXXXXXECIKVFSHRGPVRGVAWADGSNSFATISDPFVDHNAQISIYDVPQDESPSDYDDTPRLEIDLPKTNDGKRVNPTNIVWLNLNEALFVTFDNGSIRLYDTVTGDELEEIFPHEKKINRVSFNQEKTLFITSSADFTAKLYDVVNLHHLKTYKTERPVNDAVIHPTKDHILLGGGQEAMSVTTTRG 268          
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A7S4NJI3_9STRA (Eukaryotic translation initiation factor 3 subunit I n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NJI3_9STRA)

HSP 1 Score: 253 bits (646), Expect = 3.000e-79
Identity = 147/268 (54.85%), Postives = 186/268 (69.40%), Query Frame = 1
Query:    4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPP-----KLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGR 792
            RPILLKGHERSIT V YN DGDL+FTASKDHVP +W +E GER+GT+N                   XXXXXXXXXXXXXXXX  L+ + H GPVR VA+A+G + FA+ISDPFV+    +S+Y  P   DPS Y+    +EI+LP      ++  T + W  LNE L V++++GA+R +DP TG EL+    H K INR+  NKDKTL +TSS D+++KL D   LE LKTY+T+RPVN AVI+  KDH+LLGGGQ+AMSVTTT+G+
Sbjct:   38 RPILLKGHERSITLVKYNHDGDLLFTASKDHVPSMWRSENGERIGTFNGHKGTIWDLDVCRFSKRVVXXXXXXXXXXXXXXXXXXLMDFKHHGPVRGVAFAQGSQMFASISDPFVDHNAQISIYDIPEDEDPSTYDDTPRLEIDLPKMPDGKRVNPTNIVWLNLNEALFVTFDNGAVRLYDPVTGDELEEIFPHEKKINRVSFNKDKTLFITSSADFTSKLYDVVDLEHLKTYKTDRPVNDAVISEKKDHILLGGGQEAMSVTTTAGK 305          
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A1Z5K121_FISSO (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K121_FISSO)

HSP 1 Score: 247 bits (631), Expect = 2.130e-77
Identity = 130/267 (48.69%), Postives = 167/267 (62.55%), Query Frame = 1
Query:    4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPP----KLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGR 792
            RP LL+GHER IT V +N DGDL+FTASKD VP +W  E GER+GTYN                                     + V++H+GPVR VAWAEG + F TISDPFV+ P  + V+  P   DPS Y     +EIELP      +K T V W+ALNE L+V++++G IR +DP TG   +    H K INR+  N++KTL +TSS D+++KL DP  L+ LKTY+T+RPVN AVI+  KDH+LLGGGQ+AMSVTTTSG+
Sbjct:    2 RPYLLQGHERPITTVQFNHDGDLLFTASKDLVPSVWRVENGERLGTYNGHKGTVWDLDCDRFTKRLLTASADTSCRLWDVRTGECIFVFNHKGPVRGVAWAEGSQMFVTISDPFVDHPAKICVFDAPEDQDPSTYTDPPRLEIELPKINGKVVKPTHVHWTALNEDLLVAFDNGQIRLYDPETGDLKEEITAHEKKINRLRFNREKTLFITSSADFTSKLYDPVDLKHLKTYRTDRPVNDAVISEQKDHILLGGGQEAMSVTTTSGK 268          
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A6V2RRW4_HETAK (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RRW4_HETAK)

HSP 1 Score: 241 bits (616), Expect = 2.960e-75
Identity = 122/264 (46.21%), Postives = 168/264 (63.64%), Query Frame = 1
Query:    4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPPKLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGRS 795
            RPILLKGHERSIT V+YN DGDLIFTASKD VP +W++E GER+GTY+                                    +   ++H+GPVRSV WAEG + F ++SDPF+ESP +VSVY  P   DP Q EKI  +EI+L  K       +   N++++V+ EDG+IR +D  TG ++   + H++ I  +  NK+++L+LT S D  +KL+D D +E++K Y+T+RPVNA  I+P KDHVL+GGGQDAMSVTTT  ++
Sbjct:    2 RPILLKGHERSITKVLYNRDGDLIFTASKDSVPSVWYSENGERIGTYHGHVGAVWDLDCSWDSTRLLSGSADATVKMWDVETGVETCTFNHKGPVRSVRWAEGCQAFVSVSDPFMESPPFVSVYDCPDDADPEQIEKIPRLEIQLDKK-STGGAHFIKENKEILVAMEDGSIRIYDAETGEQIHQVKHHTQKIQTVFFNKERSLMLTGSADTWSKLIDLDNMEVIKQYKTDRPVNAVAISPDKDHVLMGGGQDAMSVTTTGSKA 264          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMX5_9PHAE3.890e-10973.56Eukaryotic translation initiation factor 3 subunit... [more]
D8LIC2_ECTSI3.150e-10658.18Eukaryotic initiation factor eIF3 i subunit p36 n=... [more]
A0A835ZF13_9STRA1.580e-10157.03Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2NVM0_9STRA8.000e-8752.24Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S1DBX8_CYCTE1.360e-8055.22Eukaryotic translation initiation factor 3 subunit... [more]
A0A6U3VY90_9STRA3.170e-8055.60Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2I7B8_9STRA1.390e-7955.43Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4NJI3_9STRA3.000e-7954.85Eukaryotic translation initiation factor 3 subunit... [more]
A0A1Z5K121_FISSO2.130e-7748.69Eukaryotic translation initiation factor 3 subunit... [more]
A0A6V2RRW4_HETAK2.960e-7546.21Eukaryotic translation initiation factor 3 subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig968contigP-wetherbeei_contig968:144..2359 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LIC2
Preferred nameTIF34
PFAMsWD40
Model size801
Max annot lvl2759|Eukaryota
KEGG rclassRC00055,RC00523
KEGG koko:K03246,ko:K04567
KEGG ReactionR03658
KEGG Pathwayko00970,ko03013,map00970,map03013
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0001525,GO:0001568,GO:0001732,GO:0001889,GO:0001944,GO:0002040,GO:0002181,GO:0002183,GO:0002188,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005852,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009628,GO:0009651,GO:0009653,GO:0009987,GO:0010035,GO:0010038,GO:0010467,GO:0010494,GO:0016043,GO:0016282,GO:0019538,GO:0019899,GO:0022607,GO:0022613,GO:0022618,GO:0031461,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034399,GO:0034622,GO:0034641,GO:0034645,GO:0035239,GO:0035295,GO:0035690,GO:0035770,GO:0036464,GO:0042221,GO:0042493,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043614,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0048513,GO:0048514,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0050896,GO:0051716,GO:0061008,GO:0065003,GO:0070013,GO:0070887,GO:0070993,GO:0071214,GO:0071470,GO:0071540,GO:0071541,GO:0071704,GO:0071826,GO:0071840,GO:0072358,GO:0072359,GO:0080008,GO:0097159,GO:0104004,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990234,GO:1990904
Exons6
Evalue5.16e-107
EggNOG OGsKOG0643@1|root,KOG0643@2759|Eukaryota
Ec32 ortholog descriptioneukaryotic initiation factor eIF3 i subunit p36
Ec32 orthologEc-24_001620.2
EC6.1.1.6
Descriptiontranslation initiation factor activity
Cds size801
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03012,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig968.1.1prot_P-wetherbeei_contig968.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig968 144..2359 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187105.3186142-CDS-P-wetherbeei_contig968:143..3271683187105.3186142-CDS-P-wetherbeei_contig968:143..327Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig968 144..327 +
1683187105.3308194-CDS-P-wetherbeei_contig968:543..8051683187105.3308194-CDS-P-wetherbeei_contig968:543..805Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig968 544..805 +
1683187105.349935-CDS-P-wetherbeei_contig968:1159..12341683187105.349935-CDS-P-wetherbeei_contig968:1159..1234Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig968 1160..1234 +
1683187105.3677852-CDS-P-wetherbeei_contig968:1631..16971683187105.3677852-CDS-P-wetherbeei_contig968:1631..1697Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig968 1632..1697 +
1683187105.3792307-CDS-P-wetherbeei_contig968:1944..20291683187105.3792307-CDS-P-wetherbeei_contig968:1944..2029Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig968 1945..2029 +
1683187105.3898299-CDS-P-wetherbeei_contig968:2230..23591683187105.3898299-CDS-P-wetherbeei_contig968:2230..2359Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig968 2231..2359 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig968.1.1

>prot_P-wetherbeei_contig968.1.1 ID=prot_P-wetherbeei_contig968.1.1|Name=mRNA_P-wetherbeei_contig968.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp
QRPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNG
HQGAVWDLAVNFDSTRLLSASADATARLWDVESGADLVVYSHRGPVRSVA
WAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPPKL
KATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLN
KDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLG
GGQDAMSVTTTSGRSV*
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mRNA from alignment at P-wetherbeei_contig968:144..2359+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig968.1.1 ID=mRNA_P-wetherbeei_contig968.1.1|Name=mRNA_P-wetherbeei_contig968.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2216bp|location=Sequence derived from alignment at P-wetherbeei_contig968:144..2359+ (Phaeothamnion wetherbeei SAG_119_79)
CAGAGACCAATTTTGCTCAAGGGTCATGAGCGATCCATCACCTGCGTCGT CTACAATCCGGACGGCGACCTCATCTTCACCGCCTCGAAGGACCACGTGC CCGTCTTGTGGTTCGCCGAGACCGGCGAGCGCGTAGGCACATATAACGGC CACCAGGGCGCAGTATGGGACCTCGCTGTCAACTGTGAGTTTTCGCTTGC CTACACAGTTGCTGCCCGCCCGTTGGTAGAAATCGCCGGAAAGACTTAGA ATCCATTTCAGGCAAGTGCTCGTTCTGAATTCGCCGCCCCTTTTTCAAAA CGTAGACAGGAGACACTCCTCCAAATGTTTCTCATGGTTACGTGTTCCCA TGCTCCGTTCTACCAACCCCTGCCTGCGAGAACCACAACGGACGAAGCAG TCGACTCGACCCGGCTGCTCTCCGCCTCCGCCGACGCCACGGCGCGGCTC TGGGACGTGGAGAGCGGCGCGGACCTCGTCGTCTACAGCCACCGCGGGCC CGTGCGGTCCGTTGCGTGGGCTGAGGGCGGCGAGCGCTTCGCAACCATCT CCGACCCCTTTGTGGAGAGCCCCGGCTACGTATCGGTGTACCTGACGCCG ACCGGGGTCGACCCATCGCAGTACGAGAAGATCGCCGCGGTCGAGATTGA GCTGCCCCCCAAGTGAGTTGGTTAGTTAGTTGGTCCGGTGAAGTAGCCGA CGAGGCTGACCATTTGTGCTGGCTTTTAGGCTGTGGCGGTTTGTGGCCTT TATAAGCGGTCTGGGGGCGAACCGTTTGGATTGGCAGGAAGGATCGGTCG GGACACTGTTGTGTGAAAGAGTTCTAGTCCAAGGACTTGCTGTTTCTATA TTTGTATTTGAAAGTGAAGCGACGGCAGAAAGGAAGAAGGGAAGCTCTCA GCTTATTCTTTGAAGCACCAACATCTTTCCGGCCCTGTTTTTTGCGTACA CACACGTCCCTCGTAACTGTAATCTACGAACCGTTAATTCTTATTTTTGC GCCGTTGCTGCTGCAGGCTGAAGGCGACCCGCGTGGCGTGGAGCGCGTTG AACGAGAAGCTCATCGTTTCGTATGAGGATGGCGCCATCAGGTGAGGCAG CCGATCGGGTCGAACCGCCATCCTGCAAAGCACCCTCCCGTTTCTGTTAT GCCGGAGCGTCGTCCTCCCTGCCGAGAAGGTTCATTTCTGTTTTGTCTTT GTTGTGGTGCAAACTTGTTTCTGGCGTGGCGTGAGTTGCGTCTGCCGCGA AACTTTTTCCTGCCTTCCAAAGTCCGTTCTCGCGCTCAATTTCTCTGCTG GCTTTGCCTGGATTCAGTTCCGTCCTGATGTAGCTGTTGCTACATCCCTG CGCCACCCTCTATTTGCCGTCGTCGAAAGCGACAGGCGGGGAAGTCCCAG CTTTGGTGGTTTCACGAATGGAACTACGATTTTATGTTTTTTGCCTCTGC TGTTCCCTGTCCTTTTCCGTCCGTTTCGGCGCCGTCAGGACATTTGATCC GGCGACTGGGCGGGAACTGCAGTGCGCCCAGGTGCACAGCAAGAGCATCA ATCGGTTAGTCCAATTTTTTCGTGCTTTGGGCACGGGGAAGCGTTACATC GTCCAAGGCCTTCCTTGGGATTGGATGTGCGGGCTGGGCGCCTTCCATCT TTGCCCTTTTCGCGATTGCCAGCGCGTACACCGGCCTGTTCTTAAATTAT TTTTGCCTTTCCTCAAAAGCTCTTTTCGTTGCTCTCGCGTTTCTATTCTC CGTCGCCTCTGGTGTGCTCGCTTCCCTCCCGTTCCTGTTCTCCTCTGTCA GGATCCACCTGAACAAGGACAAGACACTGCTGCTGACGTCGTCAAAGGAC TACTCCGCAAAGCTCGTCGACCCCGACACCCTCGAGGTGCGACTGCGTCA AACCTTCTCGTTTTTGTTTGAGCGTGCTTCGTTGTTTTTTCTGTGTGTGG GGATTTGCCCTGTTTTCGCTTCTTTTCCTGTTGGAGGGGTTGTCGCACTT TGTTGACCTGTTGCTGGCCGTTCTTTGTTTCACTTCAATTTCGCTCTTTT CTATTCTTGTCTGCGTCCACTCCCTGCCTGCCGGCAGATCCTGAAGACGT ATCAGACGGAGCGGCCGGTGAACGCGGCGGTGATCAACCCGACGAAGGAT CACGTGCTGCTCGGGGGTGGCCAGGACGCCATGAGCGTCACCACCACCTC GGGGAGGTCAGTGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig968:144..2359+

>mRNA_P-wetherbeei_contig968.1.1 ID=mRNA_P-wetherbeei_contig968.1.1|Name=mRNA_P-wetherbeei_contig968.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig968:144..2359+ (Phaeothamnion wetherbeei SAG_119_79)
CAGAGACCAATTTTGCTCAAGGGTCATGAGCGATCCATCACCTGCGTCGT
CTACAATCCGGACGGCGACCTCATCTTCACCGCCTCGAAGGACCACGTGC
CCGTCTTGTGGTTCGCCGAGACCGGCGAGCGCGTAGGCACATATAACGGC
CACCAGGGCGCAGTATGGGACCTCGCTGTCAACTTCGACTCGACCCGGCT
GCTCTCCGCCTCCGCCGACGCCACGGCGCGGCTCTGGGACGTGGAGAGCG
GCGCGGACCTCGTCGTCTACAGCCACCGCGGGCCCGTGCGGTCCGTTGCG
TGGGCTGAGGGCGGCGAGCGCTTCGCAACCATCTCCGACCCCTTTGTGGA
GAGCCCCGGCTACGTATCGGTGTACCTGACGCCGACCGGGGTCGACCCAT
CGCAGTACGAGAAGATCGCCGCGGTCGAGATTGAGCTGCCCCCCAAGCTG
AAGGCGACCCGCGTGGCGTGGAGCGCGTTGAACGAGAAGCTCATCGTTTC
GTATGAGGATGGCGCCATCAGGACATTTGATCCGGCGACTGGGCGGGAAC
TGCAGTGCGCCCAGGTGCACAGCAAGAGCATCAATCGGATCCACCTGAAC
AAGGACAAGACACTGCTGCTGACGTCGTCAAAGGACTACTCCGCAAAGCT
CGTCGACCCCGACACCCTCGAGATCCTGAAGACGTATCAGACGGAGCGGC
CGGTGAACGCGGCGGTGATCAACCCGACGAAGGATCACGTGCTGCTCGGG
GGTGGCCAGGACGCCATGAGCGTCACCACCACCTCGGGGAGGTCAGTGTA
G
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