mRNA_P-wetherbeei_contig968.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A6H5KMX5_9PHAE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMX5_9PHAE) HSP 1 Score: 328 bits (840), Expect = 3.890e-109 Identity = 192/261 (73.56%), Postives = 229/261 (87.74%), Query Frame = 1 Query: 4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPPKLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTS 786 RPILLKGHER+ITCVVYN DGDL+FTASKD +P LW+A+TGER+GTY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LVVY+H GPVRSVA+AEGG+RFAT+SDPF +SPG +SV+ P V Q +KIA++EI+LPPK+KAT V W ALNEKLIVSY DG IRTFDP G EL+ AQVHS+ INR+ +NKD+TLLLTSSKDY++KL+D +TL++LKTY+T+RPVNA+V++PTK+HV+LGGGQDAMSVTTTS Sbjct: 2 RPILLKGHERAITCVVYNNDGDLVFTASKDQIPSLWYAKTGERIGTYQGHQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELVVYNHMGPVRSVAFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLDKIASLEIDLPPKMKATTVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVHSQDINRLCINKDRTLLLTSSKDYTSKLLDANTLQVLKTYKTDRPVNASVMHPTKEHVILGGGQDAMSVTTTS 262
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: D8LIC2_ECTSI (Eukaryotic initiation factor eIF3 i subunit p36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC2_ECTSI) HSP 1 Score: 318 bits (815), Expect = 3.150e-106 Identity = 160/275 (58.18%), Postives = 198/275 (72.00%), Query Frame = 1 Query: 4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPPKLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQV----------HSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGRSV 798 RPILLKGHER+ITCVVYN DGDL+FTA+KD +P LW+A+TGER+GTY +LVVY+H GPVRSV++AEGG+RFAT+SDPF +SPG +SV+ P V Q EKIA +EI+LPPK+KAT+V W ALNEKLIV+Y DG IRTFDP G EL+ AQV HSK INR+ +NKD+TLLLT SKDY++KL+D +TL++LKTY+T+RPVNA+V++PTK+HV+LGGGQDAMSVTTTS V Sbjct: 2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVAYADGTIRTFDPFDGTELEYAQVGTRQGRSSGVHSKDINRLCINKDRTLLLTCSKDYTSKLLDANTLQVLKTYKTDRPVNASVMHPTKEHVILGGGQDAMSVTTTSSNVV 276
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A835ZF13_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF13_9STRA) HSP 1 Score: 308 bits (790), Expect = 1.580e-101 Identity = 150/263 (57.03%), Postives = 188/263 (71.48%), Query Frame = 1 Query: 4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPPKLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGR 792 RPILLK HER+ITCV+YN DGDL+FTA+KD+VP +W A+TGER+GTY LV Y HRGPVRSV WAEGG++F + S PF++SPG++S+Y TP+ VDPSQY+++A+ EI +P K K T V WSALN++++ S+EDG IR FDP TG L + HSK I+R++L+ D+TLLLT SKDY+AKL+D DTLE+LK Y TERPVNAAVI+PTKDH+LLGGGQDAMSVTTT R Sbjct: 2 RPILLKSHERAITCVIYNADGDLVFTAAKDNVPTVWRADTGERLGTYIGHSGAVWELSCRWDSKYLLSASADATVRLWDVQTGESLVSYPHRGPVRSVCWAEGGQKFVSASQPFMDSPGFISIYDTPSDVDPSQYQQVASREISIPNKEKCTEVLWSALNDRILASFEDGTIRVFDPETGELLSTSTPHSKPISRMYLSTDRTLLLTCSKDYTAKLLDADTLEVLKVYPTERPVNAAVIHPTKDHILLGGGQDAMSVTTTGSR 264
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A7S2NVM0_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NVM0_9STRA) HSP 1 Score: 271 bits (693), Expect = 8.000e-87 Identity = 140/268 (52.24%), Postives = 173/268 (64.55%), Query Frame = 1 Query: 4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPP-----KLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGR 792 RPILLKGHERSIT V YN DGDL+FTASKDHVP +W AE G R+GT+N + Y HRGPVR VAWA GG+ FATISDPFVE PGY+SV+ P P Q+ + +EIELP ++ AT V W LNE + V++++G IR +DP G EL+ Q H K INR+ N++KT+ +TSS D++AKL D LE LKTYQT+RPVN AVI+PTKDH+LLGGGQ+AMSVTTT+G+ Sbjct: 2 RPILLKGHERSITVVKYNRDGDLLFTASKDHVPSVWRAEDGSRLGTFNGHKGTIWDLDSDSTTTYLLSASADTTVKLWSICDGQIIRDYPHRGPVRGVAWAAGGQMFATISDPFVEHPGYISVFAVPKSESPEQWSEKPILEIELPKNNKGQRVNATNVVWLNLNEAIFVTFDNGCIRLYDPENGEELEEIQPHEKKINRVSFNRNKTMFITSSADFTAKLYDVVELEHLKTYQTDRPVNDAVISPTKDHILLGGGQEAMSVTTTAGK 269
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A7S1DBX8_CYCTE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBX8_CYCTE) HSP 1 Score: 255 bits (652), Expect = 1.360e-80 Identity = 148/268 (55.22%), Postives = 188/268 (70.15%), Query Frame = 1 Query: 4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPP-----KLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGR 792 RP+LLKGHERSITCV YN DGDL+FTASKDH P +W AE G+R+GT+N XXXXXXXXXXXXXXXXXX Y+HRGPVR VAW+EGG FATISDPFV+ +SV+ +P G PSQY + +EI+LP ++ T + W LNE L+V +++G IR +DP TG E++ H K INR+ N +KTL +TSS D+++KL D ++ KTY+T+RPVN AV++ TKDH+LLGGGQ+AMSVTTTSG+ Sbjct: 1 RPVLLKGHERSITCVKYNYDGDLLFTASKDHTPSVWRAEDGDRLGTFNGHKGTIWDLDCDRFTERXXXXXXXXXXXXXXXXXXXXXKTYTHRGPVRGVAWSEGGHMFATISDPFVDHNAKISVFDSPRGEHPSQYPEAPRLEIDLPKDHSNKRVNPTNIDWMPLNESLMVCFDNGTIRLYDPHTGDEMEEIVAHDKKINRVRFNLEKTLFITSSADFTSKLFDVVDMKHHKTYKTDRPVNDAVLSETKDHILLGGGQEAMSVTTTSGK 268
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A6U3VY90_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Thalassiosirales TaxID=33847 RepID=A0A6U3VY90_9STRA) HSP 1 Score: 254 bits (650), Expect = 3.170e-80 Identity = 149/268 (55.60%), Postives = 180/268 (67.16%), Query Frame = 1 Query: 4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPP-----KLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGR 792 RPILLKGHERSIT V +N DGDL+FTASKDH+P +W E GER+GT+N XXXXXXXXXXXXXXX + H GPVR AWA+G FATISDPFVE +SVY P DPS Y +EI+LP ++ AT + W LNE L V++++G+IR +DPATG EL H K INR+ N DKTL +TSS D++AKL D L+ LKTY+T+RPVN AVI+ TKDH+LLGGGQ+AMSVTTTSG+ Sbjct: 2 RPILLKGHERSITVVKFNFDGDLLFTASKDHIPSVWRNENGERIGTFNGHKGTIWDLDVCRFSKRVVTXXXXXXXXXXXXXXXXXXXXFVHHGPVRGAAWADGSNMFATISDPFVEHNAQISVYDVPENDDPSSYSDSPRLEIDLPKTSDGKRVNATNIVWLNLNEALFVTFDNGSIRLYDPATGEELDEFYPHEKKINRVSFNSDKTLFITSSADFTAKLYDVVDLKHLKTYKTDRPVNDAVISETKDHILLGGGQEAMSVTTTSGK 269
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A7S2I7B8_9STRA (Eukaryotic translation initiation factor 3 subunit I n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2I7B8_9STRA) HSP 1 Score: 253 bits (646), Expect = 1.390e-79 Identity = 148/267 (55.43%), Postives = 183/267 (68.54%), Query Frame = 1 Query: 4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPP-----KLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSG 789 RPILLKGHERSIT V YN DGDL+FTASKDHVP +W AE+G+R+GT+ XXXXXXXXXXXXXXX + V+SHRGPVR VAWA+G FATISDPFV+ +S+Y P PS Y+ +EI+LP ++ T + W LNE L V++++G+IR +D TG EL+ H K INR+ N++KTL +TSS D++AKL D L LKTY+TERPVN AVI+PTKDH+LLGGGQ+AMSVTTT G Sbjct: 2 RPILLKGHERSITVVKYNYDGDLLFTASKDHVPSVWRAESGDRLGTFAGHKGTIWDLDVDRFSTRVLTXXXXXXXXXXXXXXXECIKVFSHRGPVRGVAWADGSNSFATISDPFVDHNAQISIYDVPQDESPSDYDDTPRLEIDLPKTNDGKRVNPTNIVWLNLNEALFVTFDNGSIRLYDTVTGDELEEIFPHEKKINRVSFNQEKTLFITSSADFTAKLYDVVNLHHLKTYKTERPVNDAVIHPTKDHILLGGGQEAMSVTTTRG 268
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A7S4NJI3_9STRA (Eukaryotic translation initiation factor 3 subunit I n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NJI3_9STRA) HSP 1 Score: 253 bits (646), Expect = 3.000e-79 Identity = 147/268 (54.85%), Postives = 186/268 (69.40%), Query Frame = 1 Query: 4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPP-----KLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGR 792 RPILLKGHERSIT V YN DGDL+FTASKDHVP +W +E GER+GT+N XXXXXXXXXXXXXXXX L+ + H GPVR VA+A+G + FA+ISDPFV+ +S+Y P DPS Y+ +EI+LP ++ T + W LNE L V++++GA+R +DP TG EL+ H K INR+ NKDKTL +TSS D+++KL D LE LKTY+T+RPVN AVI+ KDH+LLGGGQ+AMSVTTT+G+ Sbjct: 38 RPILLKGHERSITLVKYNHDGDLLFTASKDHVPSMWRSENGERIGTFNGHKGTIWDLDVCRFSKRVVXXXXXXXXXXXXXXXXXXLMDFKHHGPVRGVAFAQGSQMFASISDPFVDHNAQISIYDIPEDEDPSTYDDTPRLEIDLPKMPDGKRVNPTNIVWLNLNEALFVTFDNGAVRLYDPVTGDELEEIFPHEKKINRVSFNKDKTLFITSSADFTSKLYDVVDLEHLKTYKTDRPVNDAVISEKKDHILLGGGQEAMSVTTTAGK 305
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A1Z5K121_FISSO (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K121_FISSO) HSP 1 Score: 247 bits (631), Expect = 2.130e-77 Identity = 130/267 (48.69%), Postives = 167/267 (62.55%), Query Frame = 1 Query: 4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPP----KLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGR 792 RP LL+GHER IT V +N DGDL+FTASKD VP +W E GER+GTYN + V++H+GPVR VAWAEG + F TISDPFV+ P + V+ P DPS Y +EIELP +K T V W+ALNE L+V++++G IR +DP TG + H K INR+ N++KTL +TSS D+++KL DP L+ LKTY+T+RPVN AVI+ KDH+LLGGGQ+AMSVTTTSG+ Sbjct: 2 RPYLLQGHERPITTVQFNHDGDLLFTASKDLVPSVWRVENGERLGTYNGHKGTVWDLDCDRFTKRLLTASADTSCRLWDVRTGECIFVFNHKGPVRGVAWAEGSQMFVTISDPFVDHPAKICVFDAPEDQDPSTYTDPPRLEIELPKINGKVVKPTHVHWTALNEDLLVAFDNGQIRLYDPETGDLKEEITAHEKKINRLRFNREKTLFITSSADFTSKLYDPVDLKHLKTYRTDRPVNDAVISEQKDHILLGGGQEAMSVTTTSGK 268
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Match: A0A6V2RRW4_HETAK (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RRW4_HETAK) HSP 1 Score: 241 bits (616), Expect = 2.960e-75 Identity = 122/264 (46.21%), Postives = 168/264 (63.64%), Query Frame = 1 Query: 4 RPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLVVYSHRGPVRSVAWAEGGERFATISDPFVESPGYVSVYLTPTGVDPSQYEKIAAVEIELPPKLKATRVAWSALNEKLIVSYEDGAIRTFDPATGRELQCAQVHSKSINRIHLNKDKTLLLTSSKDYSAKLVDPDTLEILKTYQTERPVNAAVINPTKDHVLLGGGQDAMSVTTTSGRS 795 RPILLKGHERSIT V+YN DGDLIFTASKD VP +W++E GER+GTY+ + ++H+GPVRSV WAEG + F ++SDPF+ESP +VSVY P DP Q EKI +EI+L K + N++++V+ EDG+IR +D TG ++ + H++ I + NK+++L+LT S D +KL+D D +E++K Y+T+RPVNA I+P KDHVL+GGGQDAMSVTTT ++ Sbjct: 2 RPILLKGHERSITKVLYNRDGDLIFTASKDSVPSVWYSENGERIGTYHGHVGAVWDLDCSWDSTRLLSGSADATVKMWDVETGVETCTFNHKGPVRSVRWAEGCQAFVSVSDPFMESPPFVSVYDCPDDADPEQIEKIPRLEIQLDKK-STGGAHFIKENKEILVAMEDGSIRIYDAETGEQIHQVKHHTQKIQTVFFNKERSLMLTGSADTWSKLIDLDNMEVIKQYKTDRPVNAVAISPDKDHVLMGGGQDAMSVTTTGSKA 264 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig968.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig968.1.1 >prot_P-wetherbeei_contig968.1.1 ID=prot_P-wetherbeei_contig968.1.1|Name=mRNA_P-wetherbeei_contig968.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp QRPILLKGHERSITCVVYNPDGDLIFTASKDHVPVLWFAETGERVGTYNGback to top mRNA from alignment at P-wetherbeei_contig968:144..2359+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig968.1.1 ID=mRNA_P-wetherbeei_contig968.1.1|Name=mRNA_P-wetherbeei_contig968.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2216bp|location=Sequence derived from alignment at P-wetherbeei_contig968:144..2359+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig968:144..2359+ >mRNA_P-wetherbeei_contig968.1.1 ID=mRNA_P-wetherbeei_contig968.1.1|Name=mRNA_P-wetherbeei_contig968.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig968:144..2359+ (Phaeothamnion wetherbeei SAG_119_79)back to top |