mRNA_P-wetherbeei_contig967.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig967.1.2 vs. uniprot
Match: A0A6H5J734_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J734_9PHAE) HSP 1 Score: 195 bits (496), Expect = 4.640e-51 Identity = 154/451 (34.15%), Postives = 202/451 (44.79%), Query Frame = 1 Query: 196 SEWNLTVAEPKTGRETLCIEVAEPSIKALLS----DPSLTQRHTLFATPNEAF---------GASASRNEA----------CADAAAATRLVQYQISTLPFTAPYIGQVFPTL-ADGLSLVYYGLAKTPDVRPGLYPIRFVNNANVTANP-------VPVATGDS-------------------LVPIDRLLQHPSGTIWDVIQADPSFTQLARIINGTTRVKGALSDATGA----YTFFAPDDSAYRAILTGRNMRHGDTGGDDSGSSYFGADAAAAAAFEQAGTELDEIKYAFHAVAKGTYPRSLCGRHFSQQLFRTEG-GGVKSHDYYDDFYQQAFTGAY---LESAAGPPLNVTRLPDG--------------------------------------TLLIEGVPVTEPDIMATNGVIHRLGG-VMRPPGALPAVVAAPPPNLSAAG 1257 S W+ +P + T C+E+A+PS+ LL + Q TLFA + AF G + S EA C D AT LV Y +ST+ PYIG+ FP+L + S YYG+ K+PDV L+PI+FV++ANVTA P V V + D L P+DR+L+ P GTIW+ + +DPSF+ LA +N T+ D GA YT FAPDD A +A F Q E E+ +FH +A G YP SL G HFSQQL++ + G S DYY +FY +F S AGP LNV+R +LL+EG+PV+E DI ATNGV+HRL VM PP + V+ PP LSAAG Sbjct: 122 SLWDTISGDPDFSKLTACLEMADPSVMDLLKASPGSAATAQPLTLFAPTDLAFEQPAWRKYSGGAGSNGEADHNGTIFDDRCRDKQLATALVSYHVSTMASATPYIGEEFPSLLGEDFSPRYYGIPKSPDVPAELFPIQFVDSANVTATPTVVGGPTVAVGSRDGRGXXXXXXXXXXXXGEPSYLFPVDRVLRPPVGTIWETLCSDPSFSLLAAALNSTSLAATLDGDGGGAGAMAYTLFAPDDDAIKASPE----------------------------FPQDDPEALEVLLSFHTLAAGVYPLSLSGAHFSQQLYKVDPTSGSLSRDYYREFYADSFEDGQAGKFTSLAGPLLNVSRTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRPPVHSVLSLLVEGIPVSEADITATNGVVHRLSAAVMAPPDTVAGVLLNPPFPLSAAG 544
BLAST of mRNA_P-wetherbeei_contig967.1.2 vs. uniprot
Match: A0A835Z7H6_9STRA (FAS1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7H6_9STRA) HSP 1 Score: 167 bits (424), Expect = 5.240e-42 Identity = 109/264 (41.29%), Postives = 141/264 (53.41%), Query Frame = 1 Query: 505 TPDVRPGLY-PIRFVNNANVTANPVPVATGDSLVPIDRLLQHPSGTIWDVIQADPSFTQLARIINGTTRVKGALSDA-------TGAYTFFAPDDSAYRAILTGRNMRHGDTGGDDSGSSYFGADAAAAAAFEQAGTELDEIKYAFHAVAKGTYPRSLCGRHFSQQLFRTEGGGVKSHDYYDDFYQQAFTGAYLESAAGPPLNVTRLPDGTLLIEGVPVTEPDIMATNGVIHRLGGVMRPPGALPAVV---AAPPPNLSAAGRF 1263 T DV GLY PI+ +NNAN+T V ++ IDR LQ P GTIWD + A P FT+L +N T G L D A T FAPDDSAY+++L GSS AAA E+ Y +H +A+G YPRSL GRHFSQQLF G V + D Y FY Q FTG + S A PPL+++++ G L ++ +T+PDI ATNGVIHR+ ++ PP + + APP L+ AG F Sbjct: 2 TADVPEGLYGPIQNINNANITEIKA-VGAKYTMYVIDRPLQAPVGTIWDTLVASPHFTKLVAALNATE--SGGLRDMLAGTTVPASALTLFAPDDSAYQSLL---------------GSSGAAQSAAAV-----------EVLYCYHTLAQGRYPRSLNGRHFSQQLFPVPAGKVLTRDVYAGFYAQHFTGLQMPSLAVPPLSISKIAPGQLSVQDAHITQPDITATNGVIHRISALLHPPPTVLELALCGTAPPEPLAYAGTF 236
BLAST of mRNA_P-wetherbeei_contig967.1.2 vs. uniprot
Match: D7FXZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ5_ECTSI) HSP 1 Score: 125 bits (313), Expect = 3.830e-27 Identity = 123/430 (28.60%), Postives = 157/430 (36.51%), Query Frame = 1 Query: 196 SEWNLTVAEPKTGRETLCIEVAEPSIKALLS----DPSLTQRHTLFATPNEAFGASASR---------------------NEACADAAAATRLVQYQISTLPFTAPYIGQVFPTLADGLSLVYYGLAKTPDVRPGLYPIRFVNNANVTANPVPVATGDSLVPIDRLLQHPSGTIWDVIQADPSFTQLARIINGTTRVKGALSDATG------AYTFFAPDDSAYRAILTGRNMRHGDTGGDDSGSSYFGADAAAAAAFEQAGTELDEIKYAFHAVAKGTYPRSLCGRHFSQQLFRTEG-GGVKSHDYYDDFYQQAFTGAYLESAAGPPLNVTRLPDG-------------------------------------------TLLIEGVPVTEPDIMATNGVIHRLGG-VMRPPGALPAVVAAPPPNLSAAG 1257 S W+ +P + T C+EVA PS+ LL + Q TLFA + AF A R ++ C D +AT LV Y +ST+ PYIG TIW + +DPSF+ LA +N T+ A DA G AYT FAPDD A +A F Q + E+ +FH +A G YP SL G HFSQQL++ + G S DYY +FY +F S AGP LNV+R +LL+EGVPV+E DI ATNGV+HRL VM PP + V+ PP LSAAG Sbjct: 22 SLWDTISGDPDFSKLTACLEVAGPSVMDLLKASPGSAATAQPLTLFAPTDLAFEQPAWRIYSGGXXXXXNGEADHNGTIFDDRCRDEQSATALVSYHVSTMASATPYIG---------------------------------------------------------------TIWKTLCSDPSFSLLAAALNSTSLA--ATLDANGGGAGAMAYTLFAPDDDAIKASPE----------------------------FPQDDPKALEVLLSFHTLAAGVYPLSLSGAHFSQQLYKVDPTSGSLSRDYYREFYADSFEDGQFTSLAGPLLNVSRASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRPPVHSALSLLVEGVPVSEADITATNGVVHRLSAAVMAPPDTVAGVLLNPPFPLSAAG 358
BLAST of mRNA_P-wetherbeei_contig967.1.2 vs. uniprot
Match: A0A7J4IE92_9EURY (PQQ-binding-like beta-propeller repeat protein n=1 Tax=Methanoregulaceae archaeon TaxID=2485498 RepID=A0A7J4IE92_9EURY) HSP 1 Score: 58.5 bits (140), Expect = 1.690e-5 Identity = 64/224 (28.57%), Postives = 92/224 (41.07%), Query Frame = 1 Query: 562 TANPVPVATGDSLVPIDRLLQHPSGTIWDVIQADPSFTQLARIINGTTRVKGALSDATGAYTFFAPDDSAYRAILTGR--NMRHGDTGGDDSGSSYFGADAAAAAAFEQAGTELDEIKYAFHAVAKGTYPRSLCGRHFSQQLFRTEGGGVKSHDYYDDFYQQAFTGAYLESAAGPPLNVTRLPDGTLLIEGVPVTEPDIMATNGVIHRLGGVMRPPGALPAVVA 1227 T +P TG+ V ++ + T+ DV ++ T L + + G L+ TG YT FAP+++A+ A+ G ++R AD A A D +KY H VA GTY SQ L T L + G PLNVTR PDG ++++G V D+ A NGV+H + V+ PP V A Sbjct: 98 TVSPTETPTGN--VTVEPTAGAENRTLLDVTTSESDLTTLVTALT-EANLTGPLN-GTGMYTVFAPENAAFDALAPGTLDSLR---------------ADEAVFA---------DVLKY--HVVA-GTYT--------SQNLLNT---------------------TTLVTLEGEPLNVTRGPDGAIMVDGATVVRADLRAMNGVLHVIDTVLIPPNVNATVTA 261
BLAST of mRNA_P-wetherbeei_contig967.1.2 vs. uniprot
Match: A0A8C9CIS1_PHOSS (Transforming growth factor-beta-induced protein ig-h3 n=3 Tax=Odontoceti TaxID=9722 RepID=A0A8C9CIS1_PHOSS) HSP 1 Score: 56.2 bits (134), Expect = 8.480e-5 Identity = 50/207 (24.15%), Postives = 81/207 (39.13%), Query Frame = 1 Query: 595 SLVPIDRLLQHPSGTIWDVIQADPSFTQLARIINGTTRVKGALSDATGAYTFFAPDDSAYRAILTGRNMRHGDTGGDDSGSSYFGADAAAAAAFEQAGTELDEIKYAFHAVAKGTYPRSLCGRHFSQQLFRTEGGGVKSHDYYDDFYQQAFTGAYLESAAGPPLNVTRLPDGTLLIEGVPVTEPDIMATNGVIHRLGGVMRPPGALP 1215 +L +DR+L P GT+ DV++ D F+ L I + + G YT FAP + A++A+ G EL+++ + ++ H ++ + G G L+S G L V+ + + + PVTE DIMATNGV+H + V++PPG P Sbjct: 490 TLFTMDRVLTPPVGTVMDVLKGDSRFSMLVAAIQSAGLTE--TLNREGVYTVFAPTNEAFQALPPG---------------------------------ELNKL------LGNAKELANILKYHVGDEILVSGGIGALVR---------------LKSLQGDKLEVSSK-NNVVNVNKEPVTEVDIMATNGVVHAISSVLQPPGTTP 639
BLAST of mRNA_P-wetherbeei_contig967.1.2 vs. uniprot
Match: A0A8B7G669_MICMU (Transforming growth factor-beta-induced protein ig-h3 n=1 Tax=Microcebus murinus TaxID=30608 RepID=A0A8B7G669_MICMU) HSP 1 Score: 56.2 bits (134), Expect = 8.550e-5 Identity = 52/207 (25.12%), Postives = 79/207 (38.16%), Query Frame = 1 Query: 595 SLVPIDRLLQHPSGTIWDVIQADPSFTQLARIINGTTRVKGALSDATGAYTFFAPDDSAYRAILTGRNMRHGDTGGDDSGSSYFGADAAAAAAFEQAGTELDEIKYAFHAVAKGTYPRSLCGRHFSQQLFRTEGGGVKSHDYYDDFYQQAFTGAYLESAAGPPLNVTRLPDGTLLIEGVPVTEPDIMATNGVIHRLGGVMRPPGALP 1215 +L +DR+L P GT+ DV++ D F+ L I + + G YT FAP + A++A+ G + A D +KY H ++ + G G L+S G L V+ D + + PVTE DIMATNGV+H + V++PP + P Sbjct: 490 TLFTMDRVLTPPMGTVMDVLKGDSRFSTLVAAIQSAGLTE--TLNREGVYTVFAPTNEAFQAMPPGELNK----------------------LLGNAKELADILKY-----------------HVGDEILVSGGIGALVR---------------LKSLQGDKLEVSSK-DNVVSVNKEPVTEADIMATNGVVHAIASVLQPPASRP 639 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig967.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig967.1.2 >prot_P-wetherbeei_contig967.1.2 ID=prot_P-wetherbeei_contig967.1.2|Name=mRNA_P-wetherbeei_contig967.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=391bp MVSYTTRLGADLRATMRLLVVQRIFMNRSWYVVASEWNLTVAEPKTGRETback to top mRNA from alignment at P-wetherbeei_contig967:10..1762- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig967.1.2 ID=mRNA_P-wetherbeei_contig967.1.2|Name=mRNA_P-wetherbeei_contig967.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1753bp|location=Sequence derived from alignment at P-wetherbeei_contig967:10..1762- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig967:10..1762- >mRNA_P-wetherbeei_contig967.1.2 ID=mRNA_P-wetherbeei_contig967.1.2|Name=mRNA_P-wetherbeei_contig967.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1173bp|location=Sequence derived from alignment at P-wetherbeei_contig967:10..1762- (Phaeothamnion wetherbeei SAG_119_79)back to top |