mRNA_P-wetherbeei_contig953.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig953.1.1 vs. uniprot
Match: A0A7S2GSB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GSB4_9STRA) HSP 1 Score: 116 bits (291), Expect = 5.480e-25 Identity = 68/161 (42.24%), Postives = 90/161 (55.90%), Query Frame = 3 Query: 225 CDYNVAMCCWVRDRNAHG---------DTQDGIGPASDPRDNTDVCFI---RADTATPLT-----FPGESEGAVHCHGWAWSPNVADATYQTREDVMEYVRKQDHMIARGYVGSVPGSPQCACLEDMAVVSRADCTTTDGAG----GFTACDGSTANDLLS 644 CD N AMCCWV+DR A D +DG A DP DN DVC++ RA T++ T F GE E HCHG+AW+ + + + + + + + YV DH+ RGYV +VPG+P CAC+E M VV+RADCT D ++ DG TA L S Sbjct: 172 CDLNAAMCCWVQDRQAGDGNGNCNRPYDDEDGCVDA-DPADNVDVCYVDMSRAPTSSRTTAGIAIFEGEDEDDSHCHGFAWAEDPSHESARFKANNLFYVSFFDHLRNRGYVKNVPGAPMCACVEQMPVVTRADCTEIDVTEKVIFSYSDTDGLTATILES 331
BLAST of mRNA_P-wetherbeei_contig953.1.1 vs. uniprot
Match: A0A7S1CX31_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CX31_CYCTE) HSP 1 Score: 112 bits (280), Expect = 8.210e-25 Identity = 62/185 (33.51%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 225 CDYNVAMCCWVRDRNAHGDTQDGIGPA------SDPRDNTDVCFIRADTATP--------LTFPGESEGAVHCHGWAWSPNVADATYQTREDVMEYVRKQDHMIARGYVGSVPGSPQCACLEDMAVVSRADCTT---------------------TDGAGGFTACDGS--TANDLLSFYDDVLGQ 668 CD MCCW +DR A+ D + P +DP DNTDVC++ + + + + EG HCHG+AW N + Q + + YV DH+ RGYV +VPG+P CAC+E M VV+R+DCT T F AC G+ T NDL ++Y ++ + Sbjct: 66 CDLRAVMCCWTQDRQANDDNGNCAEPYDENCVDADPADNTDVCYVDMERSPESNRVQQGLAVYENDDEGDAHCHGFAWDTNPNHESAQYKGVNLLYVSMYDHLSERGYVRNVPGAPMCACVEQMPVVTRSDCTEIEFIKSWTGYTLSGDKLSMYITYSEVDFNACQGADNTNNDLSAYYQRLVNE 250
BLAST of mRNA_P-wetherbeei_contig953.1.1 vs. uniprot
Match: D7FT55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT55_ECTSI) HSP 1 Score: 114 bits (285), Expect = 2.380e-24 Identity = 69/169 (40.83%), Postives = 90/169 (53.25%), Query Frame = 3 Query: 225 CDYNVAMCCWVRDRNAHGDTQDGIGPASDPRDNTDVCFI--RADTATPLTFPGESEGAVHCHGWAWSPNVADATYQTREDVMEYVRKQDHMIARGYVGSVPGSPQCACLEDMAVVSRADCTTTDG----AGGFTACDGSTANDLLSFYDDVLGQPFGDISTNVNLLGEC 713 C +N MCCW + DG G A DNTDVC + L FPG+SEG VHCHG+ W DAT + + ++V+ DH RGY G++ G+P C C+E+M VVS ADCTT D G FTAC T NDL + Y+ P G+++ NL+ C Sbjct: 322 CSHNTYMCCWTEN--------DGEGMA----DNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPE---DATDKYIHLLSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTAC---TKNDLRTRYE--AEYPTGELA---NLVDTC 467
BLAST of mRNA_P-wetherbeei_contig953.1.1 vs. uniprot
Match: A0A7S1VY93_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VY93_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.570e-24 Identity = 57/133 (42.86%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 225 CDYNVAMCCWVRDRNAHGDTQDGIGPA------SDPRDNTDVCFI---RADTATPLT-----FPGESEGAVHCHGWAWSPNVADATYQTREDVMEYVRKQDHMIARGYVGSVPGSPQCACLEDMAVVSRADCT 581 C N AMCCWV+DR A + + P +DP DNTD+C++ RA ++ + F GE EG HCHG+AW + +D + + + + YV DH+ RGYV +VPG+P C C+E MAVV+RADCT Sbjct: 112 CTLNAAMCCWVQDRQAGDNNGNCATPYDENCVDADPADNTDICYVDMSRAPASSRTSDGFSLFEGEEEGDSHCHGFAWDKDPSDESALFKGNNLFYVSFYDHLQQRGYVRNVPGAPMCGCVEQMAVVTRADCT 244
BLAST of mRNA_P-wetherbeei_contig953.1.1 vs. uniprot
Match: A0A6U5DFP1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5DFP1_9STRA) HSP 1 Score: 114 bits (285), Expect = 6.840e-24 Identity = 81/232 (34.91%), Postives = 105/232 (45.26%), Query Frame = 3 Query: 225 CDYNVAMCCWVRDRNAHGDTQDGIGPAS------DPRDNTDVCFIRADT----------ATPLTFPGES---EGAVHCHGWAWSPNVADATYQTREDVMEYVRKQDHMIARGYVGSVPGSPQCACLEDMAVVSRADCTTTD------------GAG------------GFTACDGSTANDLLSFYDDVLGQPFGDISTNVN-----LLGE---CPA*KVRNTCHTNVPRRYS 767 CD + AMCCW DR A + + P DP DNTD+C + D A PG++ EGAVHCHG AWS + T + + + + Y+ DH+ RGYV S PG+P CAC+E M VV+R+DCT TD GAG F AC G N+ LS Y L + G +ST +L E CP RN V R ++ Sbjct: 178 CDIHAAMCCWPSDRQAKDNNGNCATPYDTNCIDKDPADNTDLCATKLDVSPGSVTKGSDAGVSVHPGDNANGEGAVHCHGLAWSNDPNHVTSRYKANNLFYISMYDHLYQRGYVRSFPGAPMCACVEQMPVVTRSDCTQTDLKETYEISCNHEGAGTGCTAAITQIYVDFNACQGIRQNNDLSDYVARLHRE-GHLSTKQKGALKEILVENRNCPRAIERNLARAGVERGFN 408
BLAST of mRNA_P-wetherbeei_contig953.1.1 vs. uniprot
Match: A0A7S1G0X7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G0X7_9STRA) HSP 1 Score: 108 bits (269), Expect = 6.110e-22 Identity = 66/198 (33.33%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 219 NRCDYNVAMCCWVRDRNAHGDTQDGIGPASD------PRDNTDVCFI---RADTATPLT-----FPGESEGAVHCHGWAWSPNVADATYQTREDVMEYVRKQDHMIARGYVGSVPGSPQCACLEDMAVVSRADCTTTD--------------GAGGFTA-----------CDGSTAN--DLLSFYDDVLGQPFGDIST 689 ++C N AMCC+ +DR A+ + + P + P DNTD+C++ RA T++ + F +E HCHG+AW+ + D++ + + + YV DH+ ARGY +VPG+P CAC+E M VV+RADCT D G TA C G+ N DL ++Y+ ++ + G IST Sbjct: 156 DKCKLNAAMCCFTQDRQANDNNGNCATPYEENCIDASPADNTDICYVDMERAPTSSRTSQGFAIFEKNAEEDSHCHGFAWAEDPTDSSARFSANNLFYVSMYDHLTARGYARNVPGAPMCACVEQMPVVTRADCTQIDIQSETAEFSLRTEKGVTNLTATISDLKIAFNSCQGANNNNNDLTAYYERLVDE--GKIST 351
BLAST of mRNA_P-wetherbeei_contig953.1.1 vs. uniprot
Match: A0A7S1ZGD6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZGD6_TRICV) HSP 1 Score: 106 bits (265), Expect = 1.930e-21 Identity = 57/151 (37.75%), Postives = 74/151 (49.01%), Query Frame = 3 Query: 219 NRCDYNVAMCCWVRDRNAHGDTQDGIGPA-------SDPRDNTDVCFIRADTATPLTFPGES---------------EGAVHCHGWAWSPNVADATYQTREDVMEYVRKQDHMIARGYVGSVPGSPQCACLEDMAVVSRADCTTTDGAGGF 605 N CD+N A CCWV+DR A GD DP DN + C+ +TP + EG +HCHG+AW+ +V D + R + + +V DHM RGYV + PGS C C E+MAVV+RADCT A F Sbjct: 187 NDCDHNAAFCCWVQDRQA-GDNNGNCNTPYDSQCIDKDPGDNANFCYTDHSRSTPASHVSGGFSLFSDVTNDSRENIEGPIHCHGFAWADDVTDVSNVYRGNNLFFVSMYDHMHQRGYVRNAPGSAMCGCAENMAVVTRADCTEISAAETF 336
BLAST of mRNA_P-wetherbeei_contig953.1.1 vs. uniprot
Match: A0A7S4QR71_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QR71_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.120e-21 Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = 3 Query: 219 NRCDYNVAMCCWVRDRNAHGDTQDGIGPA------SDPRDNTDVCFIRADTATPLT--------FPGES---EGAVHCHGWAWSPNVADATYQTREDVMEYVRKQDHMIARGYVGSVPGSPQCACLEDMAVVSRADCTTTD 590 + C AMCCWV DR A+ + + P +DP DNTD+C++ + +PG++ EGAVHCHG AW+ + + + + + +V DH+ RGYV +VPG+P C C++ M VVSR+DCT D Sbjct: 206 DNCPLRAAMCCWVSDRQANDNNGNCATPYDTNCVNADPGDNTDLCYVDMERNPEAAGVDGGFAIYPGDNNNGEGAVHCHGMAWTNDPRSPESRYKGNNIFFVSMYDHLYTRGYVRNVPGAPMCGCIDTMPVVSRSDCTQVD 346
BLAST of mRNA_P-wetherbeei_contig953.1.1 vs. uniprot
Match: A0A7S2N413_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N413_9STRA) HSP 1 Score: 104 bits (260), Expect = 3.400e-21 Identity = 64/200 (32.00%), Postives = 94/200 (47.00%), Query Frame = 3 Query: 225 CDYNVAMCCWVRDRNAHGDTQDGIGPAS------DPRDNTDVCFI-------RADTATPLTF-------PGESEGAVHCHGWAWSP---------NVADATYQTREDVMEYVRKQDHMIARGYVGSVPGSPQCACLEDMAVVSRADCTTTDGAGGFT----------------------ACDGS-TANDLLSFYDDVLGQ 668 C+ N A CCWV+DR A + + P DP DN ++C++ + A T EG++HCHG+AW+ N+ D + + + + +V DH+ RGYV +VPGSP C+C E+MAVV+RADCT D FT AC G+ T NDL S+Y+ ++ + Sbjct: 177 CELNAAFCCWVKDRQAGDNNGNCATPYDSNCINKDPADNANLCYVDHTKGAVSSHVAGGFTIFADLQNNKANIEGSIHCHGFAWADESDATLNENNIIDESNIYKGNNLYFVSMFDHLYTRGYVKNVPGSPMCSCAENMAVVTRADCTEIDSTEKFTVNYDFASSEASISVETVDLDFNACTGANTNNDLESYYERLVNE 376
BLAST of mRNA_P-wetherbeei_contig953.1.1 vs. uniprot
Match: A0A7S2ER32_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ER32_TRICV) HSP 1 Score: 102 bits (254), Expect = 4.140e-20 Identity = 72/235 (30.64%), Postives = 99/235 (42.13%), Query Frame = 3 Query: 225 CDYNVAMCCWVRDRNAHGDTQDGIGPA-------SDPRDNTDVCFIRADTATPLT--------FPGES----EGAVHCHGWAWSPNVADATYQTREDVMEYVRKQDHMIARGYVGSVPGSPQCACLEDMAVVSRADCTTTDGAGGFTACDGSTANDLLSFYDDVLGQPFGDISTNVNLLGECPA*KVRNTCHTNVPRRY------SGCGHSKGEK*WRIHTGLGWRTLYTSAGGV 854 CD N A CCWV+DR A GD DP DN + C+ + P T F EG +HCHG AW+ + +D + + + + YV DHM RGYV + PGS C C E+MAVV+RADCT FT T++ L +V F N + A +R VP Y + G G+ +H + + +Y S+ G Sbjct: 182 CDINSAFCCWVQDRQA-GDNNGNCNTPYEAQCIDKDPADNANFCYTDHSRSRPATHVEGGFSIFVNNGHEAIEGPIHCHGLAWADDESDISNAYKGNNLFYVSLFDHMYQRGYVRNAPGSTMCGCSENMAVVTRADCTEISAQEIFTFTFNETSS-LSGVLSEVTDINFNSCQGANNRNNDLEAYVLRLVQEGRVPETYYTELQKTLVGKINGQCNNAVHDFMESKGIYRSSSGA 414 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig953.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig953.1.1 >prot_P-wetherbeei_contig953.1.1 ID=prot_P-wetherbeei_contig953.1.1|Name=mRNA_P-wetherbeei_contig953.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=197bp MKSSAVVSAFPAVLALLCSSAITASPKWTNRCDYNVAMCCWVRDRNAHGDback to top mRNA from alignment at P-wetherbeei_contig953:1385..2775- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig953.1.1 ID=mRNA_P-wetherbeei_contig953.1.1|Name=mRNA_P-wetherbeei_contig953.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1391bp|location=Sequence derived from alignment at P-wetherbeei_contig953:1385..2775- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig953:1385..2775- >mRNA_P-wetherbeei_contig953.1.1 ID=mRNA_P-wetherbeei_contig953.1.1|Name=mRNA_P-wetherbeei_contig953.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=591bp|location=Sequence derived from alignment at P-wetherbeei_contig953:1385..2775- (Phaeothamnion wetherbeei SAG_119_79)back to top |