mRNA_P-wetherbeei_contig949.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig949.3.2
Unique NamemRNA_P-wetherbeei_contig949.3.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig949.3.2 vs. uniprot
Match: A0A7S2MHH0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHH0_9STRA)

HSP 1 Score: 278 bits (711), Expect = 1.220e-86
Identity = 135/278 (48.56%), Postives = 185/278 (66.55%), Query Frame = 1
Query:  649 LSVGIPTVPRPNGEDYLTQALDAMLNQLPDDPADPFYGQVKVLVMNMHGP--GHDVFEQQRRRFAPGRPKAMYIEFLEERAKLPDPRGPNADDAGSPNVPGAKVRNQTRNLVGLLRAAFGRASYYLFAEDDMALCAHGFAALEYAIDKSTRYHGDWLALRVSYGMNGIVIPDAELPFFADYLLKHQARRPPDHLVVEWFAGETPESREHKAGRQHTAFRFNLYDHRGAVSTLRAQERPAKYRKCFELLTEPAVFRVESFKINSCPRDDIWPCDVPAAK 1476
            L +GIPTVPR N ++ L Q ++++++QLP DP DPFYGQV ++V+N+H     H  F + + ++  G P A ++ F +E   LPDP      D GS N PG KVR QTR++  +LRA    A Y++F EDDM LC +G  ++ + +++   Y  DW+A+R S+GMNGI +   +LP FADYL++HQARRPPDHLVVEWFAGE P+S ++K  R H  FR+NL+DH G  STLR+ E   +   C+E LT P +F +ESFK N CP DD+WPC    AK
Sbjct:   13 LVIGIPTVPRVNHDNLLGQVVESIVSQLPTDPHDPFYGQVLLVVVNLHASVAEHRRFHEAKSKYGRGTPAADHVHFTDEIEALPDPHTKKKKDNGSANKPGHKVRKQTRDIAVVLRAIDVTAKYFMFLEDDMTLCDNGIQSIRHLLERGEAYSSDWIAIRASFGMNGIFMRGYDLPVFADYLVEHQARRPPDHLVVEWFAGEVPQSAKYKQQRGHFGFRYNLFDHLGKKSTLRSHE-AKEMPMCYETLTFPILFLIESFKPNECPMDDLWPCPKTPAK 289          
BLAST of mRNA_P-wetherbeei_contig949.3.2 vs. uniprot
Match: A0A7S1U3S5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3S5_9STRA)

HSP 1 Score: 273 bits (698), Expect = 8.820e-83
Identity = 135/278 (48.56%), Postives = 180/278 (64.75%), Query Frame = 1
Query:  649 LSVGIPTVPRPNGEDYLTQALDAMLNQLPDDPADPFYGQVKVLVMNMHGPGHDVFEQQRRRFA--PGRPKAMYIEFLEERAKLPDPRGPNADDAGSPNVPGAKVRNQTRNLVGLLRAAFGRASYYLFAEDDMALCAHGFAALEYAIDKSTRYHGDWLALRVSYGMNGIVIPDAELPFFADYLLKHQARRPPDHLVVEWFAGETPESREHKAGRQHTAFRFNLYDHRGAVSTLRAQERPAKYRKCFELLTEPAVFRVESFKINSCPRDDIWPCDVPAAK 1476
            L +G+ TVPRPN  DYL Q L A++ QLP DP+DP+YG V+++ + +    H  FE+ +   A  PG     ++E +E   K P    P     G PNVP A VR QTR++V  LRA  G A  YLF EDDM LC  GF A+ Y ++K+T Y+G+W+A+R S+GMNGI I   ++P FA+YL +HQ+RRPPDHLVVEWFAGE P+S   K GR + AFR+N++ H G  STLR+Q+ P +Y  CFE L    +F  E+F    CP DD+WPC+V  +K
Sbjct:  174 LVIGMQTVPRPNDLDYLGQTLRALVGQLPTDPSDPWYGMVRIVAIKVSPGPHRRFEEAKTAMAQLPGGSAVTFLELVEPPGKDPGGADPPRGARGGPNVPNATVRKQTRDIVATLRACDGLADAYLFLEDDMELCPRGFEAVRYVLEKATAYYGEWIAVRCSFGMNGIFITGDDVPIFANYLEEHQSRRPPDHLVVEWFAGEKPQSAAQKRGRVNGAFRYNIFKHLGLWSTLRSQKSP-RYPACFEELNSKVLFEAEAFSAKDCPDDDLWPCNVSDSK 450          
BLAST of mRNA_P-wetherbeei_contig949.3.2 vs. uniprot
Match: D8LCU4_ECTSI (Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU4_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 2.570e-74
Identity = 148/302 (49.01%), Postives = 187/302 (61.92%), Query Frame = 1
Query:  607 ATEVSRRRQDGVPLLSVGIPTVPRPNGEDYLTQALDAMLNQLPDDPAD----PFYG-QVKVLVMNMHGPGHDVFEQQRRRFAPGRPKAMYIEFLE----ERAKLP----DPRGPNADDAGSPNVPGAKVRNQTRNLVGLLRAAFGRASYYLFAEDDMALCAHGFAALEYAIDKSTRYHGDWLALRVSYGMNGIVIPDAELPFFADYLLKHQARRPPDHLVVEWFAGETPESREHKAGRQHTAFRFNLYDHRGAVSTLRAQERPAKYRKCFELLTEPAVFRVESFKINSCPRDDIWPCDVPAA 1473
            A  V  RR+  V L   G+PTVPRP G +YL Q L A+L Q+    +     P  G  + +LVMN+HGP HD F + R ++A GR   +++   E    + A +     +P  P A  A    +P  KVR QTR+LV LLRAA G A +YLF EDDM LC  G AA+   + K+  YH DW+A+R S+GMNGI+I D ++  FA YL  HQ RRPPDHLVVEWFAGETP S E K  RQH AFRFN++ H G+VSTLR +  P  Y KCFE LT   +F VE+F    CP +D+ PCDVPA+
Sbjct:  112 AAAVPGRRKASVVL---GVPTVPRPKGVNYLEQTLQAVLAQVDKQESSTNGTPEGGLAITILVMNVHGPSHDTFYKARDKYA-GRRGVIFMSVGEAVDADGAPIVVGEGEPLTPKAQ-ARKKVLPLTKVREQTRDLVYLLRAAAGLADHYLFMEDDMLLCPGGAAAIGRMVSKAHSYHPDWIAIRASFGMNGILIQDKDVLTFASYLEMHQKRRPPDHLVVEWFAGETPASAEFKGNRQHMAFRFNVFQHLGSVSTLRGKISP-DYPKCFEELTIQTLFEVEAFDFKGCPDEDMSPCDVPAS 407          
BLAST of mRNA_P-wetherbeei_contig949.3.2 vs. uniprot
Match: A0A7S1C7T6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7T6_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.920e-72
Identity = 122/274 (44.53%), Postives = 174/274 (63.50%), Query Frame = 1
Query:  643 PLLSVGIPTVPRPNGEDYLTQALDAMLNQLPDDPADPFYGQVKVLVMN-MHGPGHDVFEQQRRRFAPG-RPKAMYIEFLEERAKLPDPRGPNADDAGSPNVPGAKVRNQTRNLVGLLRAAFGRASYYLFAEDDMALCAHGFAALEYAIDKSTRYHGDWLALRVSYGMNGIVIPDAELPFFADYLLKHQARRPPDHLVVEWFAGETPESREHKAGRQHTAFRFNLYDHRGAVSTLRAQERPAKYRKCFELLTEPAVFRVESFKINSCPRDDIWPC 1458
            P L +G+P+ PR N  DY+   LD +L+QLP+DP  P +G+V V+VMN  HG  H  F++ R R  P   PK  Y+ F E     PDP G +  DAG+ + PG KVR QTR++  LL  A     +Y+F EDD  +C H   +L Y ++K+ R + +W+ LR  +G+NG +I   +  F A Y  +HQARRPPDH++VEWFAGE P+++ +   R+H AFR+NL++H G  S+LR+ +   ++  C+E LTEP +F+VE+FK   C  DDIWPC
Sbjct:   24 PWLVIGMPSAPRTNDADYVNPTLDYILDQLPEDPLHPLFGRVLVVVMNNAHGQAHPAFDRARARLDPATHPKGRYVRF-EVNGPQPDPLG-DRHDAGTNDRPGWKVRQQTRDVASLLEVAGELGEFYMFMEDDFRMCPHALRSLVYLVEKADRLYPNWILLRTCFGLNGGLIHAEDTAFLAGYYREHQARRPPDHMLVEWFAGERPQAKAYVGNRKHIAFRYNLFEHIGFHSSLRSTK-ATRFAACYEELTEPTLFQVEAFK-PECQHDDIWPC 293          
BLAST of mRNA_P-wetherbeei_contig949.3.2 vs. uniprot
Match: A0A7S3ZTN9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTN9_9STRA)

HSP 1 Score: 244 bits (622), Expect = 7.860e-72
Identity = 131/273 (47.99%), Postives = 176/273 (64.47%), Query Frame = 1
Query:  649 LSVGIPTVPRPNGEDYLTQALDAMLNQLPDDPADPFY-GQVKVLVMNMHGPGHDVFEQQRRRFAPGRPKAMYIEFLEERAKLPDPRGPNADDAGSPNVPGAKVRNQTRNLVGLLRAAFGRASYYLFAEDDMALCAHGFAALEYAIDKSTRYHGDWLALRVSYGMNGIVIPDAELPFFADYLLKHQARRPPDHLVVEWFAGETPESREHKAGRQHTAFRFNLYDHRGAVSTLRAQERPAKYRKCFELLTEPAVFRVESFKINSCPRDDIWPCDV 1464
            L+VG+PTVPR N EDYL   L+A   +L   PA+    G V V V+N+HG GH  F++ + RF+   P   + E  E+ A   +   P    AG+ N PG +VR QTR++  +LR    +A Y++F EDDMALC HGF A+ Y I++++R++ DWLA+R S+GMNGI + DA+L  FADYL +HQARRPPDHLVVEWFAGE  +S+ +K  R H  FR+N++ H G  STL +  R  +   CFE+LT P VF VE+F    CPR D  PC+ 
Sbjct:  157 LAVGLPTVPRLNDEDYLGTTLNAFAREL--FPAESMLAGAVGVFVVNVHGAGHKRFDEAKERFSTN-PAFRFSEKAEDPALTANRVDP-PHVAGNANRPGWRVRKQTRDVASVLRIVHDQARYFVFGEDDMALCDHGFRAMAYIIERASRFYPDWLAIRASFGMNGIFLKDADLLPFADYLEEHQARRPPDHLVVEWFAGERDQSKTYKNNRPHLGFRWNIFSHLGTKSTLGS--RTKRMPGCFEMLTTPVVFPVEAFLKTKCPRQDFTPCEA 423          
BLAST of mRNA_P-wetherbeei_contig949.3.2 vs. uniprot
Match: A0A7S3H1Q4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1Q4_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.360e-70
Identity = 113/210 (53.81%), Postives = 152/210 (72.38%), Query Frame = 1
Query:  847 PKAMYIEFLEERAK--LPDPRGPNAD--DAGSPNVPGAKVRNQTRNLVGLLRAAFGRASYYLFAEDDMALCAHGFAALEYAIDKSTRYHGDWLALRVSYGMNGIVIPDAELPFFADYLLKHQARRPPDHLVVEWFAGETPESREHKAGRQHTAFRFNLYDHRGAVSTLRAQERPAKYRKCFELLTEPAVFRVESFKINSCPRDDIWPCDV 1464
            PKA Y +F E ++   +PDP  PN+   D G+ N PG  VR QTRN+V ++R +   A YYLF EDDM  C +G  A++Y ++K++RYH +WLA+R SYGMNGI + + +L  FADYLLKHQARRPPDHLVVEW+AGETPE+ +++  R +  F++NL++H G VSTLR+Q+    Y KC+E L EP VF+VE+F    CPRDD+WPC+V
Sbjct:    7 PKAKYFKFSEVQSPEVIPDPV-PNSSPRDLGNANKPGFLVRRQTRNIVTVMRKSLNVAKYYLFLEDDMQFCNNGLLAMQYLLNKASRYHPNWLAIRASYGMNGIFMHNNDLETFADYLLKHQARRPPDHLVVEWYAGETPEAGKYRGKRANIGFKYNLFNHIGVVSTLRSQK-STSYPKCYEPLLEPTVFQVEAFNPRQCPRDDVWPCNV 214          
BLAST of mRNA_P-wetherbeei_contig949.3.2 vs. uniprot
Match: A0A6H5JEY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY6_9PHAE)

HSP 1 Score: 244 bits (623), Expect = 2.490e-70
Identity = 141/301 (46.84%), Postives = 179/301 (59.47%), Query Frame = 1
Query:  616 VSRRRQDGVPLLSVGIPTVPRPNGEDYLTQALDAMLNQLPDDPAD----PFYG-QVKVLVMNMHGPGHDVFEQQRRRFAPGRPKAMYIEFLEERAKLPDPRGPNADDAGSPNVPGA----------KVRNQTRNLVGLLRAAFGRASYYLFAEDDMALCAHGFAALEYAIDKSTRYHGDWLALRVSYGMNGIVIPDAELPFFADYLLKHQARRPPDHLVVEWFAGETPESREHKAGRQHTAFRFNLYDHRGAVSTLRAQERPAKYRKCFELLTEPAVFRVESFKINSCPRDDIWPCDVPAA 1473
            V  RR+  V L   G+PTVPRP G +YL Q L A+L Q+    +     P  G  + +LVMN+HGP H+ F + R ++     +   + F+     +     P     G P  P A          KV+ QTR+LV LLRAA G A +YLF EDDM LC  G AA+   + K+  YH DW+A+R S+GMNGI+I D ++  FA YL  HQ RRPPDHLVVEWFAGETP S E K  RQH AFR+N++ H G+VSTLR +  P  Y KCFE LT   +F VE+F    CP DD+ PCDVPA+
Sbjct:  280 VPGRRKASVVL---GVPTVPRPKGVNYLEQTLQAVLAQVDQQESSTNGTPEGGLAITILVMNVHGPSHEAFYKARDKYE----RRRGVIFISVGEAVDADGAPIVVGEGEPLTPKAQSRKKVLPLMKVQEQTRDLVYLLRAAAGLADHYLFMEDDMLLCPGGAAAISRMVSKAHSYHPDWIAIRASFGMNGILIQDKDVLTFASYLEMHQKRRPPDHLVVEWFAGETPASAEFKGNRQHMAFRYNVFRHLGSVSTLRGKISP-DYPKCFEELTIQTLFEVEAFDFKGCPDDDMSPCDVPAS 572          
BLAST of mRNA_P-wetherbeei_contig949.3.2 vs. uniprot
Match: A0A7S0UAV5_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UAV5_HEMAN)

HSP 1 Score: 234 bits (597), Expect = 6.150e-70
Identity = 119/276 (43.12%), Postives = 176/276 (63.77%), Query Frame = 1
Query:  649 LSVGIPTVPRPNGEDYLTQALDAMLNQLPDDPADPFYGQVKVLVMNMHGPGHDVFEQQRRRFAPGRPKAMYIEFLEERAKLPDPRGPNADDAGSPNVPGAKVRNQTRNLVGLLRAAFGRASYYLFAEDDMALCAHGFAALEYAIDKSTRYH-GDWLALRVSYGMNGIVIPDAELPFFADYLLKHQARRPPDHLVVEWFAGETPESREHKAGRQHTAFRFNLYDHRGAVSTLRAQERPAKYRKCFELLTEPAVFRVESFKINSCPRDDIWPCDVPAA 1473
            L++ IPTVPRP   DYL+Q +DA   QLP D  DPFYG+V ++++N     H VF ++R +   G   + Y +F+E   +  D    + +  G PNVPG+KVR QTR +V ++R + G +S++LF EDD   C H   +L Y I K+  YH G W  +RVSYG+ GIV+   ++   A+YL +HQ+RRPPDHL+ EW A ET +++ +  GR++  +RFN+++H G+ STLRA ++   +  C+E L  P VF  E++K + C  DD+WPCD PA+
Sbjct:    6 LTIAIPTVPRPGDLDYLSQTIDAFKKQLPLDRTDPFYGKVFIVILNNKPGSHKVFAREREK-TEGSEHSGYFKFIEASVQQVDS---STNREGDPNVPGSKVRIQTRAVVSMMRHSIGLSSHFLFMEDDFLPCPHSLRSLHYLIAKAHAYHPGGWSGIRVSYGLCGIVLNGGDVEEVANYLEEHQSRRPPDHLLPEWIAAETQQAQVYLKGRRNVGYRFNIFEHIGSTSTLRASKQVG-WPGCYEELVYPTVFEGEAWKPDKCSDDDMWPCDKPAS 276          
BLAST of mRNA_P-wetherbeei_contig949.3.2 vs. uniprot
Match: A0A0L0DVV5_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DVV5_THETB)

HSP 1 Score: 233 bits (595), Expect = 1.600e-68
Identity = 129/279 (46.24%), Postives = 173/279 (62.01%), Query Frame = 1
Query:  643 PLLSVGIPTVPRPNGE-----DYLTQALDAMLNQLPDDPADPFYGQVKVLVMNMHGPG--HDVFEQQRRRFAPGRPKAMYIEFLEERAKLPDPRGPNADDAGSPNVPGAKVRNQTRNLVGLLRAAFGRASYYLFAEDDMALCAHGFAALEYAIDKSTRYHGDWLALRVSYGMNGIVIPDAELPFFADYLLKHQARRPPDHLVVEWFAGETPESREHKAGRQHTAFRFNLYDHRGAVSTLRAQERPAKYRKCFELLTEPAVFRVESFKINSCPRDDIWPC 1458
            P L VGIPTVPR +       DYL++ +DA++ Q+   PA   Y QV V+VMN H P   H + +  + R A  R    ++ F++    +P+P  P A D GSPN PG KVR QTR++V LLR A  R  Y++F EDD  LC +GFAA+ Y + K   Y   ++++R S+G+ GIV+P  +   FADYL KHQARRPPDHL  EW   ETPE+  +   R + AFR+N+  H G VSTLR+ E    Y  C+E L EP +F+VE+F   +CPRDD+WPC
Sbjct:   86 PWLVVGIPTVPRIDSATGKPLDYLSKTVDALVTQMSSHPASLEYRQVVVVVMN-HAPKAEHVMLDAAKERVASARLSHAFV-FVDNDGSVPNPT-PGATDVGSPNKPGYKVRQQTRDVVALLREAAPRGRYFMFLEDDFELCPNGFAAIAYMVRKMEAYSPGFVSVRASFGLAGIVMPSPDALVFADYLEKHQARRPPDHLCSEWTGKETPEAVAYLGQRVNGAFRYNILHHLGRVSTLRS-ELSVPYPGCYEFLGEPILFKVEAFDPRACPRDDVWPC 360          
BLAST of mRNA_P-wetherbeei_contig949.3.2 vs. uniprot
Match: A0A3P3YJU1_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YJU1_PLABS)

HSP 1 Score: 223 bits (568), Expect = 9.660e-65
Identity = 118/273 (43.22%), Postives = 172/273 (63.00%), Query Frame = 1
Query:  643 PLLSVGIPTVPRPNGEDYLTQALDAMLNQLPDDPADPFYGQVKVLVMNMHGPGHDVFEQQRRRFAPGRPKAMYIEFLEERAKLPDPRGPNADDAGSPNVPGAKVRNQTRNLVGLLRAAFGRA-SYYLFAEDDMALCAHGFAALEYAIDKSTRYHGDWLALRVSYGMNGIVIPDAELPFFADYLLKHQARRPPDHLVVEWFAGETPESREHKAGRQHTAFRFNLYDHRGAVSTLRAQERPAKYRKCFELLTEPAVFRVESFKINSCPRDDIWPC 1458
            P L  G+PT+ R    DYL   LD +L QLP+DP DP Y ++ VL++  +G  H  F + + R +  RP+ +++E  + R    D   P A++  +P+VP  +VR QTR++V ++R A+  + SY++F EDD  LC  G  A+ + + K+ RY  DW+AL ++ GMNGI +   ++P F+DYL +HQ RRPPDHLVVEWFAGET +S  ++  R H AFR+NL  HRGA STLR      +   C+ +  +  +F VESFK++ C  DD+WPC
Sbjct:   71 PYLLFGVPTLARKT--DYLNPTLDRILEQLPEDPNDPMYRRICVLIVK-NGAKHSAFGKAQSRLS-HRPEFIFVEN-DARLTAEDLEEPPANEFINPDVPSWRVRKQTRDIVSMMRLAYDLSPSYFMFLEDDFWLCPSGLEAILHLLAKAYRYAPDWIALVMAEGMNGIFLKRKDMPIFSDYLFEHQRRRPPDHLVVEWFAGETEQSASYRKDRPHLAFRYNLLRHRGAESTLRGSIGGTE-NSCYHVNDDGRMFNVESFKVDECDHDDVWPC 337          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig949.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2MHH0_9STRA1.220e-8648.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1U3S5_9STRA8.820e-8348.56Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
D8LCU4_ECTSI2.570e-7449.01Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglu... [more]
A0A7S1C7T6_9STRA1.920e-7244.53Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S3ZTN9_9STRA7.860e-7247.99Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S3H1Q4_9STRA1.360e-7053.81Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6H5JEY6_9PHAE2.490e-7046.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0UAV5_HEMAN6.150e-7043.12Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A0L0DVV5_THETB1.600e-6846.24Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
A0A3P3YJU1_PLABS9.660e-6543.22Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig949contigP-wetherbeei_contig949:2896..5901 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LCU4
PFAMsGlyco_transf_54
Model size1498
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue4.21e-75
EggNOG OGs2CXVF@1|root,2S024@2759|Eukaryota
Cds size1497
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig949.3.2prot_P-wetherbeei_contig949.3.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig949 2896..5901 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187095.9348862-CDS-P-wetherbeei_contig949:2895..29851683187095.9348862-CDS-P-wetherbeei_contig949:2895..2985Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig949 2896..2985 -
1683187095.9444063-CDS-P-wetherbeei_contig949:3255..35761683187095.9444063-CDS-P-wetherbeei_contig949:3255..3576Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig949 3256..3576 -
1683187095.9525623-CDS-P-wetherbeei_contig949:3907..40421683187095.9525623-CDS-P-wetherbeei_contig949:3907..4042Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig949 3908..4042 -
1683187095.9607375-CDS-P-wetherbeei_contig949:4258..43521683187095.9607375-CDS-P-wetherbeei_contig949:4258..4352Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig949 4259..4352 -
1683187095.968661-CDS-P-wetherbeei_contig949:4520..46121683187095.968661-CDS-P-wetherbeei_contig949:4520..4612Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig949 4521..4612 -
1683187095.9766862-CDS-P-wetherbeei_contig949:4905..53611683187095.9766862-CDS-P-wetherbeei_contig949:4905..5361Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig949 4906..5361 -
1683187095.9847465-CDS-P-wetherbeei_contig949:5592..59011683187095.9847465-CDS-P-wetherbeei_contig949:5592..5901Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig949 5593..5901 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig949.3.2

>prot_P-wetherbeei_contig949.3.2 ID=prot_P-wetherbeei_contig949.3.2|Name=mRNA_P-wetherbeei_contig949.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=499bp
GLISESRLAAAARSPKKAAARRKGETREVRRCCCSDTAAKRCWCCALGVL
LCVYLLHLKLRRTGRSDADGAPPLQTETDYIRALLELVGQQNKTMVRLRQ
QLDIYAALAKFSSVTASAGNASCDSLLLELATCEAERAREALQHPPPTGP
AAGPDLARLQREASRGLGGLDPLLAADGAAAATAAAPAAESAAVEAAARA
AAATEVSRRRQDGVPLLSVGIPTVPRPNGEDYLTQALDAMLNQLPDDPAD
PFYGQVKVLVMNMHGPGHDVFEQQRRRFAPGRPKAMYIEFLEERAKLPDP
RGPNADDAGSPNVPGAKVRNQTRNLVGLLRAAFGRASYYLFAEDDMALCA
HGFAALEYAIDKSTRYHGDWLALRVSYGMNGIVIPDAELPFFADYLLKHQ
ARRPPDHLVVEWFAGETPESREHKAGRQHTAFRFNLYDHRGAVSTLRAQE
RPAKYRKCFELLTEPAVFRVESFKINSCPRDDIWPCDVPAAKDEPPQIQ
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mRNA from alignment at P-wetherbeei_contig949:2896..5901-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig949.3.2 ID=mRNA_P-wetherbeei_contig949.3.2|Name=mRNA_P-wetherbeei_contig949.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3006bp|location=Sequence derived from alignment at P-wetherbeei_contig949:2896..5901- (Phaeothamnion wetherbeei SAG_119_79)
GGGCTTATATCGGAAAGCCGGTTGGCTGCCGCCGCTCGCTCACCAAAGAA AGCGGCTGCCCGGCGTAAAGGAGAGACACGTGAAGTAAGGCGATGTTGCT GCAGCGACACAGCAGCGAAGCGGTGCTGGTGCTGTGCCTTGGGCGTCCTG CTTTGTGTGTATTTGCTGCATTTGAAGCTCCGGCGCACGGGGCGTTCCGA TGCAGACGGCGCTCCGCCGCTGCAGACCGAGACCGACTACATACGAGCAC TTCTTGAGCTCGTTGGACAGCAGAACAAGACTATGGTTCGCCTTCGGCAA CAGCTTGATGTGAGTTCCTTTCCAGGCAATGCGTTTGTCTATTTCGAGAC CGGAATCCGTGCGAATCGTTGGGAAGTTTATGAATCTGCGGCGAAAGCAA TGTCAGTTTCGATAAAAGTGGCGAATCCCGATGATGTCTGTTTTTCCTTC GCCTCAGAGCTTTCTGTCGCTGCAAAAGTCTTTTTCAAAGCGACTTTCTT AGATACCCTTTGCCTCCCCTGCGCCCTGTTTGGCCGTCAGATCTATGCCG CCCTTGCCAAGTTTAGTTCCGTCACCGCCTCAGCCGGCAACGCAAGCTGC GACTCGCTCCTGCTGGAGCTCGCCACGTGCGAGGCCGAGCGGGCGCGAGA AGCTCTGCAGCACCCGCCGCCAACGGGGCCAGCGGCAGGACCCGATTTGG CTAGGCTGCAGAGAGAAGCCAGCAGAGGGCTCGGAGGCTTAGACCCGCTG CTGGCGGCTGACGGGGCGGCGGCCGCAACGGCTGCGGCGCCGGCGGCGGA GTCGGCAGCGGTGGAGGCTGCGGCGCGGGCGGCGGCGGCGACGGAGGTGT CACGGCGGCGGCAAGACGGCGTGCCGCTGCTGTCTGTGGGCATCCCGACG GTACCGCGGCCCAACGGGGAGGACTATCTGACACAAGCGCTCGATGCCAT GCTGAACCAGCTGCCAGACGACCCCGCCGACCCGTTTTACGGCCAGGTAA GGCTTTTGCTTCATGCCGGTGCTTTTTTCCTTGGCCTCTGCGCTGTCTCA TGGACGTGTTTGGAAGGAAAACGTTCACACCCTTGCAAATCTAATTCGTT TCTGAGAGCATGGCCTTGCTCCCGCGCTGAATCAATGAAAACTTTTAAAA AGAAAGAGAACTTTTCTCTGCCAGCCGATCCTCGCACATAGAGCTCTGTT GCTAGCTTCGCTGGGCTGGTTCAGGGGGGTACCTCAATGCTGCCCAGTCG TTTGTTCTGCAAACGCTCCTTTGTTTGCATCCAGCGCAGGTAAAAGTGCT CGTGATGAACATGCATGGCCCGGGCCATGACGTTTTTGAGCAGCAGCGGA GGCGGTTCGCGCCAGGGCGACCAAAGGCCATGTGAGTCAGAAGAGGCATT GCGAAGGCTTTCGTGGGCAGCCAAATCTCCCAAAGAACGGTTGCGTCTGA CAGCGCTGTCGCTTCTCTCCCTTGCGGCTCTGCGCTCGCCACGCCCTTTC TCCTGTGGCGCTTTCCCCGCCGCCGCTGGTGCTCTGAACCACTGGGCAGG TACATTGAGTTTCTGGAGGAAAGGGCGAAGCTGCCGGACCCCCGCGGACC GAACGCCGACGACGCTGGAAGTCCGAACGTGCCGGGGGCTAAGGTTAGCG AGAGGCATGGAGAGGCATGTGTTCGTGGTGCTAGAAGTCGAATTCTAGTT GCGGCGGAGCTTACCGTCCATCAACGGCCGCTCGGCACGTCGGTGCTACG ACGCCAGTTGAGACCACCCCTGGAGCCAGCCGTTCGCTGGCGACACCGCT CTCTTCTGATTCTCTCCTTCTTGCTTAACTCTTCCAGTTCCGCTTCCCTC TTCCTGTAGGTGCGAAACCAGACGCGGAATCTCGTGGGGCTGCTGCGGGC GGCTTTTGGAAGAGCGTCGTATTACCTCTTCGCGGAGGACGACATGGCGC TGTGCGCCCACGGCTTCGCCGCCCTGGAGTATGCCATCGACAAGGTACGA AAAGGAGACGAAAAGAATCGCTACAGCGTTTTCGGAATCGTTACCGTTGG CGCAGGTCCGGCTGTGCGCTGCCCTGCTGCTGTTTTCTTTGGAGAGAGCG CTGTGGAAAGCGAGGTGGCTTGGTCGATGGGGAGGAGGGGTTCATCCACT ATCTGCATCTGGATGGCGGATTCCGCGACCTTACATCAAGGCGGCAACGC TCCCACTTACCGTTGCTTCCTCCCTCTTTATTTCTTGCTTCTTCTCTATG CCGCCAATCCTCTCACACACCTGCACCAATTCCGCACCGAAACACAAAAC GCCGCCCAAAACCACCACGCCACAGTCGACGCGCTACCACGGGGACTGGC TGGCGCTGCGCGTCTCCTACGGCATGAACGGCATCGTTATCCCAGACGCC GAGCTGCCGTTCTTCGCTGACTACCTCTTGAAGCACCAAGCGCGGCGACC GCCGGACCACCTGGTCGTTGAGTGGTTTGCCGGAGAGACGCCCGAGAGCC GGGAGCACAAGGCCGGGCGGCAGCACACGGCTTTCCGCTTCAACCTGTAC GACCACCGGGGCGCGGTCAGCACGCTGCGGGCGCAGGAACGGCCGGCCAA GTACCGCAAGTGCTTCGAGCTGCTAACGGAGCCCGCCGTGTTTCGGGTGC ATTTTTCCTGCTGTGTTCGGGGGCCGGTTACTGTTTTGTCGCAGGAGCCA GTTGATACCATTTGTTGTATTCACTGTTATCACCACCAGCGCGAACGCTG CCAGCACTGCCGAAGACTTCATCCACCCTCCTTGCCGCCTTGCCAAGCAC ATACCCAAACCAGTGGCATCTAATAGTGTCACACACGTTTCTTCGCTCTC GTCCGGCCAATTTTCCCCCTCTTGCACCTCCCCGGTGGCATCGCTCGGTC GGTCGCTCGGCGGCAGGTGGAAAGTTTCAAGATAAACTCCTGCCCAAGGG ACGACATCTGGCCGTGCGACGTGCCGGCGGCGAAGGACGAGCCGCCGCAA ATCCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig949:2896..5901-

>mRNA_P-wetherbeei_contig949.3.2 ID=mRNA_P-wetherbeei_contig949.3.2|Name=mRNA_P-wetherbeei_contig949.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1497bp|location=Sequence derived from alignment at P-wetherbeei_contig949:2896..5901- (Phaeothamnion wetherbeei SAG_119_79)
GGGCTTATATCGGAAAGCCGGTTGGCTGCCGCCGCTCGCTCACCAAAGAA
AGCGGCTGCCCGGCGTAAAGGAGAGACACGTGAAGTAAGGCGATGTTGCT
GCAGCGACACAGCAGCGAAGCGGTGCTGGTGCTGTGCCTTGGGCGTCCTG
CTTTGTGTGTATTTGCTGCATTTGAAGCTCCGGCGCACGGGGCGTTCCGA
TGCAGACGGCGCTCCGCCGCTGCAGACCGAGACCGACTACATACGAGCAC
TTCTTGAGCTCGTTGGACAGCAGAACAAGACTATGGTTCGCCTTCGGCAA
CAGCTTGATATCTATGCCGCCCTTGCCAAGTTTAGTTCCGTCACCGCCTC
AGCCGGCAACGCAAGCTGCGACTCGCTCCTGCTGGAGCTCGCCACGTGCG
AGGCCGAGCGGGCGCGAGAAGCTCTGCAGCACCCGCCGCCAACGGGGCCA
GCGGCAGGACCCGATTTGGCTAGGCTGCAGAGAGAAGCCAGCAGAGGGCT
CGGAGGCTTAGACCCGCTGCTGGCGGCTGACGGGGCGGCGGCCGCAACGG
CTGCGGCGCCGGCGGCGGAGTCGGCAGCGGTGGAGGCTGCGGCGCGGGCG
GCGGCGGCGACGGAGGTGTCACGGCGGCGGCAAGACGGCGTGCCGCTGCT
GTCTGTGGGCATCCCGACGGTACCGCGGCCCAACGGGGAGGACTATCTGA
CACAAGCGCTCGATGCCATGCTGAACCAGCTGCCAGACGACCCCGCCGAC
CCGTTTTACGGCCAGGTAAAAGTGCTCGTGATGAACATGCATGGCCCGGG
CCATGACGTTTTTGAGCAGCAGCGGAGGCGGTTCGCGCCAGGGCGACCAA
AGGCCATGTACATTGAGTTTCTGGAGGAAAGGGCGAAGCTGCCGGACCCC
CGCGGACCGAACGCCGACGACGCTGGAAGTCCGAACGTGCCGGGGGCTAA
GGTGCGAAACCAGACGCGGAATCTCGTGGGGCTGCTGCGGGCGGCTTTTG
GAAGAGCGTCGTATTACCTCTTCGCGGAGGACGACATGGCGCTGTGCGCC
CACGGCTTCGCCGCCCTGGAGTATGCCATCGACAAGTCGACGCGCTACCA
CGGGGACTGGCTGGCGCTGCGCGTCTCCTACGGCATGAACGGCATCGTTA
TCCCAGACGCCGAGCTGCCGTTCTTCGCTGACTACCTCTTGAAGCACCAA
GCGCGGCGACCGCCGGACCACCTGGTCGTTGAGTGGTTTGCCGGAGAGAC
GCCCGAGAGCCGGGAGCACAAGGCCGGGCGGCAGCACACGGCTTTCCGCT
TCAACCTGTACGACCACCGGGGCGCGGTCAGCACGCTGCGGGCGCAGGAA
CGGCCGGCCAAGTACCGCAAGTGCTTCGAGCTGCTAACGGAGCCCGCCGT
GTTTCGGGTGGAAAGTTTCAAGATAAACTCCTGCCCAAGGGACGACATCT
GGCCGTGCGACGTGCCGGCGGCGAAGGACGAGCCGCCGCAAATCCAG
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