mRNA_P-wetherbeei_contig9094.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9094.1.1
Unique NamemRNA_P-wetherbeei_contig9094.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9094.1.1 vs. uniprot
Match: A0A836CKD9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKD9_9STRA)

HSP 1 Score: 419 bits (1078), Expect = 4.600e-138
Identity = 214/311 (68.81%), Postives = 251/311 (80.71%), Query Frame = 1
Query:    1 SKDPSGARAALMGDGFGLSSEQADAILGLRLGRLTSMEETKLRAEHVELTHQVARLRDLMADDGKTNELMVAELTELKRMHAVPRRTVIKPDEGELNEEDLLANDRSVIVATAAGYIKRMPLEEFAAQNRGTRGKAGAKMSDDEDVVVHFFLCQQDHDTLLFVSDRGVAYGIRAFQVPLASRTAKGVPFPQVLPLTAGEQISSIIPVSQFNENEYLVLLTKRGFIKKTSLAAFSSMTARGLIIINLEADDNLRWVKRCSETDSVIIGTEQGYASRFLADSKQLRPTGRTSRGVKAMKYRKNDFPVDMDILP 933
            SKD + AR  L    FGLS+EQADA+L LRLGRLT  EE KL+ EH +LT ++ RL  LM DD    ++MV EL ELK  HAVPRR++IK DEGELN+EDLLAND S+IV T +GYIKRMPLEEF AQ RGTRGKAGAK+SD  D V  FF C+ DH+T+LFVSDRGVAYG+RAFQVP ASRTAKGVP PQVLPL+A E+ISS+IPV +F ++EYLVLLTKRG+IKKTSLAAF S+TARGL II+LE  D L WVK C+E DS+IIGT+QG A RF A + QLRP+GRTSRGVKAMK++  D+PVD+DILP
Sbjct:  385 SKDNATARQHLTNKDFGLSTEQADAVLALRLGRLTKAEEIKLKKEHTDLTKEIKRLLGLMQDDESVRQVMVKELLELKAKHAVPRRSIIKKDEGELNDEDLLANDNSIIVITRSGYIKRMPLEEFQAQRRGTRGKAGAKLSDPGDEVAQFFTCR-DHNTVLFVSDRGVAYGLRAFQVPTASRTAKGVPVPQVLPLSADERISSVIPVEEFKDDEYLVLLTKRGWIKKTSLAAFQSLTARGLTIISLEDGDELLWVKTCTEADSIIIGTQQGMAVRFAASADQLRPSGRTSRGVKAMKFKPGDYPVDIDILP 694          
BLAST of mRNA_P-wetherbeei_contig9094.1.1 vs. uniprot
Match: A0A6H5KKP9_9PHAE (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKP9_9PHAE)

HSP 1 Score: 417 bits (1072), Expect = 1.060e-134
Identity = 210/311 (67.52%), Postives = 250/311 (80.39%), Query Frame = 1
Query:    1 SKDPSGARAALMGDGFGLSSEQADAILGLRLGRLTSMEETKLRAEHVELTHQVARLRDLMADDGKTNELMVAELTELKRMHAVPRRTVIKPDEGELNEEDLLANDRSVIVATAAGYIKRMPLEEFAAQNRGTRGKAGAKMSDDEDVVVHFFLCQQDHDTLLFVSDRGVAYGIRAFQVPLASRTAKGVPFPQVLPLTAGEQISSIIPVSQFNENEYLVLLTKRGFIKKTSLAAFSSMTARGLIIINLEADDNLRWVKRCSETDSVIIGTEQGYASRFLADSKQLRPTGRTSRGVKAMKYRKNDFPVDMDILP 933
            S D   AR  LM + +GLS EQADAIL LRLGRLTSMEE KL+AE  +L   + RL  +M +D K  +++V ELTE K  HAVPRRT+IKPDEGEL EEDLLAND SV+V TAAGYIKRMPLEEF AQNRGTRGKAGAKMS D DVV HFF CQ DHDT+LFVSD+GVAYGIRAFQVP+ SRTAKGVP PQVLP+   E+I+S++ V  F E+EYLVLLT++G+IK+T LAAF S ++RGLIII+L  DD LRWVKRC + D ++IG++QGYA+RFLA+ K LRP+GRTSRGVKAM +R  D PVD+ ++P
Sbjct:  563 STDTPMARDGLMAEPYGLSQEQADAILALRLGRLTSMEEGKLKAEAEDLKATMERLEGVMNEDSKVMDIIVEELTEAKNKHAVPRRTMIKPDEGELQEEDLLANDSSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQ-DHDTILFVSDKGVAYGIRAFQVPVGSRTAKGVPVPQVLPIAGDEEIASVLAVDDFREDEYLVLLTQKGYIKRTPLAAFRSTSSRGLIIISLGEDDTLRWVKRCCDDDGIVIGSKQGYATRFLANKKDLRPSGRTSRGVKAMNFRDEDVPVDIGVVP 872          
BLAST of mRNA_P-wetherbeei_contig9094.1.1 vs. uniprot
Match: A0A0G4ESH9_VITBC (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESH9_VITBC)

HSP 1 Score: 349 bits (896), Expect = 9.420e-110
Identity = 180/310 (58.06%), Postives = 234/310 (75.48%), Query Frame = 1
Query:    4 KDPSGARAALMGDGFGLSSEQADAILGLRLGRLTSMEETKLRAEHVELTHQVARLRDLMADDGKTNELMVAELTELKRMHAVPRRTVIKPDEGELNEEDLLANDRSVIVATAAGYIKRMPLEEFAAQNRGTRGKAGAKMSDDEDVVVHFFLCQQDHDTLLFVSDRGVAYGIRAFQVPLASRTAKGVPFPQVLPLTAGEQISSIIPVSQFNENEYLVLLTKRGFIKKTSLAAFSSMTARGLIIINLEADDNLRWVKRCSETDSVIIGTEQGYASRFLADSKQLRPTGRTSRGVKAMKYRKNDFPVDMDILP 933
            KD + AR AL G  F LS EQA+A+L L L RLT++EE KL+ E  EL  +++ L  LM +D K   LM  EL ELKR +   RR+ I  +  +L EEDL+ NDRSV++ T +GY+KR+P+EEF  Q+RGTRGK GAK+SDD D V HFF C  DHDTLLFVS+RGVA+ ++A+QVPL+SRTA+GVP PQVLP+ A ++I+S++P++QF E+EYLVLLTK+G+IKKT LAAF++++ RGL +I LE DD LR+V+RC++ DSVII T  GYA RF  D +QLRPT RTSRGVK++K R  D   D+DILP
Sbjct:  429 KDANQAREALQGSPFDLSEEQAEALLRLTLARLTALEEEKLKTELEELRARISELEALMREDSKVYHLMETELKELKRKYGGQRRSEIIHEAADLTEEDLIPNDRSVLIVTHSGYVKRLPVEEFDPQSRGTRGKLGAKISDD-DSVAHFFACN-DHDTLLFVSNRGVAFTVKAYQVPLSSRTARGVPLPQVLPIAADDRITSVLPITQFKEDEYLVLLTKKGWIKKTPLAAFANVSNRGLTLIALEPDDVLRFVRRCTDDDSVIIATRGGYAIRFRTDGEQLRPTSRTSRGVKSLKIRDGDQVADLDILP 736          
BLAST of mRNA_P-wetherbeei_contig9094.1.1 vs. uniprot
Match: A0A6P0VLR8_9CYAN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=2 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0VLR8_9CYAN)

HSP 1 Score: 315 bits (806), Expect = 1.110e-101
Identity = 163/295 (55.25%), Postives = 217/295 (73.56%), Query Frame = 1
Query:   46 FGLSSEQADAILGLRLGRLTSMEETKLRAEHVELTHQVARLRDLMADDGKTNELMVAELTELKRMHAVPRRTVIKPDEGELNEEDLLANDRSVIVATAAGYIKRMPLEEFAAQNRGTRGKAGAKMSDDEDVVVHFFLCQQDHDTLLFVSDRGVAYGIRAFQVPLASRTAKGVPFPQVLPLTAGEQISSIIPVSQFNENEYLVLLTKRGFIKKTSLAAFSSMTARGLIIINLEADDNLRWVKRCSETDSVIIGTEQGYASRFLADSKQLRPTGRTSRGVKAMKYRKNDFPVDMDIL 930
            FGLSS QADAIL ++L RLT++E  K++AEH EL  ++A L+D++A   +  E++  E+ +LK  HA PRRT I P EG++ + DL+AN++ VI+ T  GYIKRM + EF+AQ R TRGKA A+M DD D V HFF C  DHD++LF SDRGV Y +RA+Q+P +SRTA+GVP  Q+LP+   E+I+SI+ VS+F +NEYLV+LT +G+IKKT+L AFS++   GLI I+L   D LRWV+R    DSVIIG+ QG A  F AD +QLRP GR +RGVKAMK R++D  + MDIL
Sbjct:   19 FGLSSAQADAILQMQLRRLTALEAEKIQAEHEELQARIADLKDILARRSRVLEIIETEVAQLKATHASPRRTEILPVEGDIGDIDLIANEKVVILLTEQGYIKRMQVSEFSAQARATRGKAAARMKDD-DGVEHFFTCC-DHDSVLFFSDRGVVYCLRAYQIPASSRTARGVPIVQMLPIPHEEKITSIVHVSEFTDNEYLVMLTCQGYIKKTALDAFSNIRTNGLIAISLAEGDQLRWVRRAKAEDSVIIGSRQGMAIHFKADQEQLRPLGRATRGVKAMKLREHDELISMDIL 311          
BLAST of mRNA_P-wetherbeei_contig9094.1.1 vs. uniprot
Match: UPI0019ED7656 (DNA topoisomerase (ATP-hydrolyzing) subunit A n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019ED7656)

HSP 1 Score: 324 bits (831), Expect = 3.760e-101
Identity = 167/309 (54.05%), Postives = 226/309 (73.14%), Query Frame = 1
Query:    7 DPSGARAALMGDGFGLSSEQADAILGLRLGRLTSMEETKLRAEHVELTHQVARLRDLMADDGKTNELMVAELTELKRMHAVPRRTVIKPDEGELNEEDLLANDRSVIVATAAGYIKRMPLEEFAAQNRGTRGKAGAKMSDDEDVVVHFFLCQQDHDTLLFVSDRGVAYGIRAFQVPLASRTAKGVPFPQVLPLTAGEQISSIIPVSQFNENEYLVLLTKRGFIKKTSLAAFSSMTARGLIIINLEADDNLRWVKRCSETDSVIIGTEQGYASRFLADSKQLRPTGRTSRGVKAMKYRKNDFPVDMDILP 933
            D +GAR  L+ +GFGLS  QADAIL ++L RLT++E  K++AEH +L  Q+   RD++A   +   ++V E+TE+K++HA PRRT I   EGE+ + DL+AN+++VI+ T  GYIKRMP+  F AQ+R TRGKA AK+ ++ DVV HF  C  DHDT+LF SDRGV Y + A+Q+P ASR A+GVP  Q+LP++  E+I+S++ V++F ENEYLV+LT++G IKKT L+AFS++ A GLI I+LE  D LRWV+   E DSVIIGT QG    F AD +QLRP GR ++GVKAMK + ND  + MDILP
Sbjct:  407 DAAGARTELV-EGFGLSEMQADAILQMQLRRLTALEAEKIQAEHEDLQKQITDFRDILARRERIEGIIVQEVTEIKKIHATPRRTEILIAEGEILDTDLIANEQAVILLTEQGYIKRMPISTFGAQSRATRGKAAAKIKEN-DVVEHFITCC-DHDTVLFFSDRGVVYSLNAYQIPAASRNARGVPIVQMLPISQAEKITSVVSVAEFTENEYLVMLTRKGNIKKTVLSAFSNIRANGLIAISLEEGDELRWVRLAREEDSVIIGTRQGMTIHFKADRQQLRPLGRATKGVKAMKLKPNDELISMDILP 712          
BLAST of mRNA_P-wetherbeei_contig9094.1.1 vs. uniprot
Match: W7TLA9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLA9_9STRA)

HSP 1 Score: 327 bits (837), Expect = 7.930e-101
Identity = 169/310 (54.52%), Postives = 225/310 (72.58%), Query Frame = 1
Query:    4 KDPSGARAALMGDGFGLSSEQADAILGLRLGRLTSMEETKLRAEHVELTHQVARLRDLMADDGKTNELMVAELTELKRMHAVPRRTVIKPDEGELNEEDLLANDRSVIVATAAGYIKRMPLEEFAAQNRGTRGKAGAKMSDDEDVVVHFFLCQQDHDTLLFVSDRGVAYGIRAFQVPLASRTAKGVPFPQVLPLTAGEQISSIIPVSQ-FNENEYLVLLTKRGFIKKTSLAAFSSMTARGLIIINLEADDNLRWVKRCSETDSVIIGTEQGYASRFLADSKQLRPTGRTSRGVKAMKYRKNDFPVDMDIL 930
            KD + A+A LMG  + +S  QA AIL L LGRLT++E+ KLRAE  +L  Q+   + +M  D K  ++M  EL E++  HAVPRR+ I+   G L E DLLANDRSV++ T AGYIKRMPL++F  Q RGTRGKAGA+MS D D+V HFF C  DHD ++F+S++GVA+GIRAFQVP+ASR +KGVP PQVLPL++ + +SS+IP+ + F  +E+LVLLTK+GFIKKT + AF  +T+RGLI I+L   D L W +RC++ D ++I T +GY+ RF   S  L+PTGRTSRG  A+K RK D  VD+ +L
Sbjct:  532 KDTAAAKATLMGSQYDMSEAQAQAILALTLGRLTALEDAKLRAEREQLRGQIEDFQAMMRQDEKVFDVMKQELREIRAKHAVPRRSSIRAHAGALTELDLLANDRSVMMVTEAGYIKRMPLDDFEQQRRGTRGKAGARMSQD-DLVNHFFACN-DHDHVVFISEKGVAFGIRAFQVPVASRVSKGVPLPQVLPLSSDDHVSSVIPLGESFQADEFLVLLTKQGFIKKTPVDAFKKLTSRGLIAISLGEGDTLGWARRCTDQDDILISTRKGYSMRFA--SADLKPTGRTSRGCSAIKLRKTDEMVDITVL 837          
BLAST of mRNA_P-wetherbeei_contig9094.1.1 vs. uniprot
Match: UPI001684E3D6 (DNA topoisomerase (ATP-hydrolyzing) subunit A n=2 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI001684E3D6)

HSP 1 Score: 323 bits (827), Expect = 1.550e-100
Identity = 158/296 (53.38%), Postives = 222/296 (75.00%), Query Frame = 1
Query:   46 FGLSSEQADAILGLRLGRLTSMEETKLRAEHVELTHQVARLRDLMADDGKTNELMVAELTELKRMHAVPRRTVIKPDEGELNEEDLLANDRSVIVATAAGYIKRMPLEEFAAQNRGTRGKAGAKMSDDEDVVVHFFLCQQDHDTLLFVSDRGVAYGIRAFQVPLASRTAKGVPFPQVLPLTAGEQISSIIPVSQFNENEYLVLLTKRGFIKKTSLAAFSSMTARGLIIINLEADDNLRWVKRCSETDSVIIGTEQGYASRFLADSKQLRPTGRTSRGVKAMKYRKNDFPVDMDILP 933
            +GLS  QADAIL ++L RLT++E  K++ EH EL  ++A L+D++    +  E++  E++EL+ MH  PRRTVI+  +GEL + DL+AND+++I+ T  GY+KRMP+ EF AQ+R TRGKAGAKM +D+++  HFF C  DHD++LF SDRGV Y +RA+Q+P+ASRTA+GVP  Q+LP+   E+I+SI+PVS+F ++EYLV+LT+ G+IKKT L+AFS++ A GLI I+LE  D LRWV+R    DSVIIG+ +G    F A+ +QLRP GR +RGV+AM  R+ D  + MDILP
Sbjct:  422 YGLSEAQADAILQMQLRRLTALEAEKIQQEHEELQRRIADLQDILDRRERVLEIIQTEISELRSMHGTPRRTVIEHTDGELGDIDLIANDQALILVTEQGYVKRMPVSEFEAQSRATRGKAGAKMKEDDNIE-HFFTCN-DHDSVLFFSDRGVVYSLRAYQIPIASRTARGVPIVQMLPIPHVEKITSIVPVSEFTDDEYLVMLTQNGYIKKTELSAFSNIRANGLIAISLEEGDQLRWVRRARSEDSVIIGSRKGMTIHFRANQEQLRPLGRPTRGVRAMSLREGDELISMDILP 715          
BLAST of mRNA_P-wetherbeei_contig9094.1.1 vs. uniprot
Match: K9W8V1_9CYAN (DNA gyrase subunit A n=3 Tax=Oscillatoriales TaxID=1150 RepID=K9W8V1_9CYAN)

HSP 1 Score: 322 bits (824), Expect = 5.900e-100
Identity = 163/305 (53.44%), Postives = 227/305 (74.43%), Query Frame = 1
Query:   19 ARAALMGDGFGLSSEQADAILGLRLGRLTSMEETKLRAEHVELTHQVARLRDLMADDGKTNELMVAELTELKRMHAVPRRTVIKPDEGELNEEDLLANDRSVIVATAAGYIKRMPLEEFAAQNRGTRGKAGAKMSDDEDVVVHFFLCQQDHDTLLFVSDRGVAYGIRAFQVPLASRTAKGVPFPQVLPLTAGEQISSIIPVSQFNENEYLVLLTKRGFIKKTSLAAFSSMTARGLIIINLEADDNLRWVKRCSETDSVIIGTEQGYASRFLADSKQLRPTGRTSRGVKAMKYRKNDFPVDMDILP 933
            A+A LM + +GLS  QADAIL ++L RLT++E  K++AEH EL  ++A L D++A   +  E++  E+ +LK  HA PRRT+I+P EGE+++ DL+AN+++VI+ T  GYIKRM + EF AQ R TRGKAG +M +D D V HF  C  DHD++LF S+RGV Y ++A+ +P ASRTA+GVP  Q+LP+   E+I+SI+PVS+F ++EYLV+LT++G+IKKT+L AFS++ A GLI I+LE  D LRWV+R ++TDS+IIG+ QG A  F  D+ QLRP GR +RGVKAMK R  D  + MDI+P
Sbjct:  410 AKAELM-EVYGLSEAQADAILQMQLRRLTALEAEKIQAEHEELQARIADLEDILARRSRILEIIETEVNQLKATHATPRRTIIQPMEGEIDDTDLIANEKAVILLTEQGYIKRMAVNEFGAQARATRGKAGTRMKED-DGVEHFLTCC-DHDSILFFSERGVTYCLKAYHIPSASRTARGVPIVQLLPIPREEKITSIVPVSEFTDHEYLVMLTRKGYIKKTALDAFSNIRANGLIAISLEEGDQLRWVQRATQTDSIIIGSRQGMAIHFKTDNDQLRPLGRATRGVKAMKLRAKDELISMDIIP 711          
BLAST of mRNA_P-wetherbeei_contig9094.1.1 vs. uniprot
Match: A0A3M1KYF0_9CYAN (DNA gyrase subunit A n=1 Tax=Cyanobacteria bacterium J083 TaxID=2420336 RepID=A0A3M1KYF0_9CYAN)

HSP 1 Score: 320 bits (819), Expect = 1.980e-99
Identity = 159/298 (53.36%), Postives = 223/298 (74.83%), Query Frame = 1
Query:   40 DGFGLSSEQADAILGLRLGRLTSMEETKLRAEHVELTHQVARLRDLMADDGKTNELMVAELTELKRMHAVPRRTVIKPDEGELNEEDLLANDRSVIVATAAGYIKRMPLEEFAAQNRGTRGKAGAKMSDDEDVVVHFFLCQQDHDTLLFVSDRGVAYGIRAFQVPLASRTAKGVPFPQVLPLTAGEQISSIIPVSQFNENEYLVLLTKRGFIKKTSLAAFSSMTARGLIIINLEADDNLRWVKRCSETDSVIIGTEQGYASRFLADSKQLRPTGRTSRGVKAMKYRKNDFPVDMDILP 933
            +GFGLS  QADAIL ++L RLT++E  K++AEH +L  Q+A L+D++A   +  E++  E+ E+K  +A PRRT I   EGEL + DL+AN++++I+ T  GYIKRMP++ F AQ+R TRGKA AK+ +D DV+ HF  C  DHD +LF SDRGV Y + A+Q+P ASR+A+G+P  Q+LP+T  E+I+SI+P+S+F E+EYLV+LT +G+IKKT+L+AF ++ + GLI I+L  DD LRWV+     DS+I+GT QG A RFLAD++QLRP GR +RGV+AMK R ND  + MD+LP
Sbjct:  416 EGFGLSPVQADAILQMQLRRLTALEAEKIQAEHEDLQAQIADLQDILAKRERIEEIIRTEVREIKENYASPRRTEIIQAEGELVDTDLIANEQALILVTEQGYIKRMPVDTFDAQSRATRGKAAAKIKED-DVIEHFITCC-DHDYVLFFSDRGVVYCLNAYQIPTASRSARGIPLLQMLPITREEKITSIVPISEFTEDEYLVMLTHKGYIKKTALSAFHNIRSNGLIAISLSEDDQLRWVRLVKPEDSIIVGTRQGMAIRFLADNQQLRPLGRATRGVRAMKLRGNDEIISMDVLP 711          
BLAST of mRNA_P-wetherbeei_contig9094.1.1 vs. uniprot
Match: A0A2S6VGE7_9CYAN (DNA gyrase subunit A n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A2S6VGE7_9CYAN)

HSP 1 Score: 320 bits (819), Expect = 2.580e-99
Identity = 156/298 (52.35%), Postives = 220/298 (73.83%), Query Frame = 1
Query:   40 DGFGLSSEQADAILGLRLGRLTSMEETKLRAEHVELTHQVARLRDLMADDGKTNELMVAELTELKRMHAVPRRTVIKPDEGELNEEDLLANDRSVIVATAAGYIKRMPLEEFAAQNRGTRGKAGAKMSDDEDVVVHFFLCQQDHDTLLFVSDRGVAYGIRAFQVPLASRTAKGVPFPQVLPLTAGEQISSIIPVSQFNENEYLVLLTKRGFIKKTSLAAFSSMTARGLIIINLEADDNLRWVKRCSETDSVIIGTEQGYASRFLADSKQLRPTGRTSRGVKAMKYRKNDFPVDMDILP 933
            + +GLS  QADAIL ++L RLT++E  K+R EH EL  Q+A LRD++A   +  E++  E+T++K  HA PRRTVI+PDEGE+ + DL+AN++++I+ T  GYIKRMP++ F AQ+R TRGKA  +M +D D + HF  C  DHD++LF SDRGV Y ++A+Q+P+ SRT++G P  Q+LP+   E+I+S++PV++F+ +EYLV+LT+ G+IKKT L+AFS++ A GLI I+LE  D LRWV+R    DS+IIG+  G A  F  D +QLRP GR +RGVKAMK R+ D  + MDILP
Sbjct:  416 ESYGLSDAQADAILQMQLRRLTALEAEKIRQEHEELQLQIADLRDILARRERVLEIIENEVTQIKATHATPRRTVIEPDEGEIGDTDLIANEKALILVTEQGYIKRMPIDAFEAQSRATRGKAATRMKED-DGIEHFLTCC-DHDSVLFFSDRGVVYCLKAYQIPIGSRTSRGTPIVQMLPIPKDEKITSVVPVNEFSSDEYLVMLTRGGYIKKTELSAFSNIRANGLIAISLEEGDQLRWVRRARVEDSIIIGSRYGMAIHFRTDHEQLRPLGRATRGVKAMKLREGDELIGMDILP 711          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9094.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKD9_9STRA4.600e-13868.81DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribon... [more]
A0A6H5KKP9_9PHAE1.060e-13467.52DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectoca... [more]
A0A0G4ESH9_VITBC9.420e-11058.06DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrel... [more]
A0A6P0VLR8_9CYAN1.110e-10155.25DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=2... [more]
UPI0019ED76563.760e-10154.05DNA topoisomerase (ATP-hydrolyzing) subunit A n=1 ... [more]
W7TLA9_9STRA7.930e-10154.52DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodo... [more]
UPI001684E3D61.550e-10053.38DNA topoisomerase (ATP-hydrolyzing) subunit A n=2 ... [more]
K9W8V1_9CYAN5.900e-10053.44DNA gyrase subunit A n=3 Tax=Oscillatoriales TaxID... [more]
A0A3M1KYF0_9CYAN1.980e-9953.36DNA gyrase subunit A n=1 Tax=Cyanobacteria bacteri... [more]
A0A2S6VGE7_9CYAN2.580e-9952.35DNA gyrase subunit A n=6 Tax=Cyanobacteria TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9094contigP-wetherbeei_contig9094:223..2300 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LPZ0
Preferred nameGYRA
PFAMsDNA_gyraseA_C,DNA_topoisoIV
Model size933
Max annot lvl2759|Eukaryota
KEGG koko:K02469,ko:K03164
KEGG Pathwayko01524,map01524
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0009295,GO:0009507,GO:0009536,GO:0016592,GO:0031974,GO:0031981,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0070013
Exons5
Evalue2.39e-128
EggNOG OGsCOG0187@1|root,KOG0355@2759|Eukaryota
EC5.99.1.3
DescriptionDNA topoisomerase type II (ATP-hydrolyzing) activity
Cds size933
COG categoryL
BRITEko00000,ko00001,ko01000,ko03032,ko03036,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187075.512263-CDS-P-wetherbeei_contig9094:222..3451683187075.512263-CDS-P-wetherbeei_contig9094:222..345Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9094 223..345 -
1683187075.5219264-CDS-P-wetherbeei_contig9094:525..6721683187075.5219264-CDS-P-wetherbeei_contig9094:525..672Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9094 526..672 -
1683187075.5302045-CDS-P-wetherbeei_contig9094:1070..12711683187075.5302045-CDS-P-wetherbeei_contig9094:1070..1271Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9094 1071..1271 -
1683187075.5424082-CDS-P-wetherbeei_contig9094:1634..18161683187075.5424082-CDS-P-wetherbeei_contig9094:1634..1816Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9094 1635..1816 -
1683187075.5582793-CDS-P-wetherbeei_contig9094:2020..23001683187075.5582793-CDS-P-wetherbeei_contig9094:2020..2300Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9094 2021..2300 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9094.1.1prot_P-wetherbeei_contig9094.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9094 223..2300 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9094.1.1

>prot_P-wetherbeei_contig9094.1.1 ID=prot_P-wetherbeei_contig9094.1.1|Name=mRNA_P-wetherbeei_contig9094.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=311bp
SKDPSGARAALMGDGFGLSSEQADAILGLRLGRLTSMEETKLRAEHVELT
HQVARLRDLMADDGKTNELMVAELTELKRMHAVPRRTVIKPDEGELNEED
LLANDRSVIVATAAGYIKRMPLEEFAAQNRGTRGKAGAKMSDDEDVVVHF
FLCQQDHDTLLFVSDRGVAYGIRAFQVPLASRTAKGVPFPQVLPLTAGEQ
ISSIIPVSQFNENEYLVLLTKRGFIKKTSLAAFSSMTARGLIIINLEADD
NLRWVKRCSETDSVIIGTEQGYASRFLADSKQLRPTGRTSRGVKAMKYRK
NDFPVDMDILP
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mRNA from alignment at P-wetherbeei_contig9094:223..2300-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9094.1.1 ID=mRNA_P-wetherbeei_contig9094.1.1|Name=mRNA_P-wetherbeei_contig9094.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2078bp|location=Sequence derived from alignment at P-wetherbeei_contig9094:223..2300- (Phaeothamnion wetherbeei SAG_119_79)
AGCAAGGACCCGTCGGGAGCCCGCGCCGCCCTGATGGGCGACGGCTTCGG CCTGTCGTCGGAACAGGCGGACGCCATTCTGGGGCTGCGGTTGGGGCGAC TCACCAGCATGGAGGAGACCAAGCTGCGGGCCGAGCACGTTGAGCTGACG CATCAGGTCGCGCGGCTGCGAGATTTGATGGCGGACGACGGCAAGACGAA CGAGCTCATGGTGGCGGAGCTGACAGAACTCAAGCGGATGCACGCCGTCC CGCGTCGGACCGTTATCAAGCCCGACGAGGGTCAGTACTGGGGTTTCCTG GTTGAATTGGAGCCGCTGTCACCGTGCTGCTGTGACTGCCGCTGCTGTTG GGGCCGGTGGCGCCTCCACCACCAGTGCCCGAAGCCAAGCATGTCTACCT CACACGTTCCTATCCCTTCCTACCGATCCATTAAACTCTAAAACTGCCAC TTTTCATCCGAACGAATCCAATCGAACCAACCAGGTGAGCTGAACGAGGA GGACCTGCTAGCGAACGATCGTTCGGTCATCGTCGCGACGGCGGCTGGCT ACATAAAGCGCATGCCGCTGGAAGAATTCGCGGCGCAGAACCGCGGCACG CGCGGCAAAGCGGGCGCCAAGATGAGCGATGACGAGGACGTCGTCGTGCA CTTCTTTCTCTGCCAGGTCCGTCTCTCAGTTGGCAAATGGTGCAGCCTGG TTGCTGGCTTCTCTCCACGACCGCTGCGTGCTTTGCCGGCGCCGCCATCG GCCCCGGTGCTGATGCAGCCGCAGGTGTCCTCATCCTACTGCCGCAGCAG CTAGCCGCCATTGCTGCCATCGCTGCTACTATCGCCGCCGGTGCCGCGCT TAAGTATGAGCTGCTTGAAGCTGCTCCTGTTCCTGCTTCAGCTTACCTAC TCGCCCGTCGCCCCACCCGTTTGCCTACATAATGATTGTTACCGTTTCCC TGCTGTCCGCTGTGTCGTTTCTTGGGGACTCCTCCTCCGAATCCCTCCCT ATTTCCCATTCCTTTTTTCGCATCGCGAGCAGGACCACGACACCCTGCTT TTCGTGTCGGACCGCGGCGTGGCCTACGGCATCCGCGCCTTCCAGGTGCC GCTTGCGTCGCGCACCGCCAAGGGCGTACCCTTCCCGCAGGTGCTGCCGC TGACCGCCGGCGAGCAGATCTCGAGCATCATCCCCGTCAGCCAGTTCAAT GAGAACGAGTACCTCGTCCTGCTCACCAAGGTCAATCGACTAGGTGTTGC TGCACAGTTAGTTGGGGGCAGCGGCCGCTTTCGGTTTTGCTCTGTTGGGG TTTGCCCGACGGAACGGATTTTGTGTCTGGTGGGGAGGATGGATGTGGTG CAATAAGTTGAGAGGCGTTTAGACAAATGGTAGCAGGTTTAGGGCTTACT AGCGGTGGAAAGCGCTCTGGCAGGGGCAACGACTGCTGCCGCCGATCACG GCAGTGGCCGCTGGTCACGGCAGTGGTGTCCAAAATGCGTAGGTTGGGCG CGGCGTCTGTTTATTAGCTAGATGAGCTCTGGCAGTTGTCTCGCTGATGC TGTGCCTGCCTTCTGAAATTCTTGCGTGCCCATCCATCCTATACGTCTTC CCCTCTCCCTCTTTCTACTCTGTGGCAGCGCGGCTTCATCAAGAAGACGT CGCTGGCGGCGTTCTCGTCGATGACGGCACGCGGGCTCATCATCATTAAT CTCGAGGCCGATGACAACCTTCGCTGGGTCAAGCGCTGCTCCGAGACTGA CAGCGTCATCATCGGCACCGAGCAGGTCAGAATCCTTATTGGTTTCTTGT TTCTTCTTTCCGGTTTGGTCGTCGGAGCATCTGGTTTGGTCGTTAAGAAA TCGGCTACGAAAACGCGGAAAAGGCGCGGCAAAAAAGGTGTGAAGCACCT TCTTCCTTCACTGTTCAAACGATTTTGGTTTGAGTTCTCCCCTCTGTGCG TGCAGGGCTACGCATCACGGTTCCTGGCGGACTCGAAGCAGCTGAGACCG ACGGGGCGCACGAGCCGCGGCGTCAAGGCGATGAAGTACCGCAAGAACGA CTTCCCCGTTGACATGGACATCCTGCCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9094:223..2300-

>mRNA_P-wetherbeei_contig9094.1.1 ID=mRNA_P-wetherbeei_contig9094.1.1|Name=mRNA_P-wetherbeei_contig9094.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=933bp|location=Sequence derived from alignment at P-wetherbeei_contig9094:223..2300- (Phaeothamnion wetherbeei SAG_119_79)
AGCAAGGACCCGTCGGGAGCCCGCGCCGCCCTGATGGGCGACGGCTTCGG
CCTGTCGTCGGAACAGGCGGACGCCATTCTGGGGCTGCGGTTGGGGCGAC
TCACCAGCATGGAGGAGACCAAGCTGCGGGCCGAGCACGTTGAGCTGACG
CATCAGGTCGCGCGGCTGCGAGATTTGATGGCGGACGACGGCAAGACGAA
CGAGCTCATGGTGGCGGAGCTGACAGAACTCAAGCGGATGCACGCCGTCC
CGCGTCGGACCGTTATCAAGCCCGACGAGGGTGAGCTGAACGAGGAGGAC
CTGCTAGCGAACGATCGTTCGGTCATCGTCGCGACGGCGGCTGGCTACAT
AAAGCGCATGCCGCTGGAAGAATTCGCGGCGCAGAACCGCGGCACGCGCG
GCAAAGCGGGCGCCAAGATGAGCGATGACGAGGACGTCGTCGTGCACTTC
TTTCTCTGCCAGCAGGACCACGACACCCTGCTTTTCGTGTCGGACCGCGG
CGTGGCCTACGGCATCCGCGCCTTCCAGGTGCCGCTTGCGTCGCGCACCG
CCAAGGGCGTACCCTTCCCGCAGGTGCTGCCGCTGACCGCCGGCGAGCAG
ATCTCGAGCATCATCCCCGTCAGCCAGTTCAATGAGAACGAGTACCTCGT
CCTGCTCACCAAGCGCGGCTTCATCAAGAAGACGTCGCTGGCGGCGTTCT
CGTCGATGACGGCACGCGGGCTCATCATCATTAATCTCGAGGCCGATGAC
AACCTTCGCTGGGTCAAGCGCTGCTCCGAGACTGACAGCGTCATCATCGG
CACCGAGCAGGGCTACGCATCACGGTTCCTGGCGGACTCGAAGCAGCTGA
GACCGACGGGGCGCACGAGCCGCGGCGTCAAGGCGATGAAGTACCGCAAG
AACGACTTCCCCGTTGACATGGACATCCTGCCC
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