mRNA_P-wetherbeei_contig8891.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8891.1.1
Unique NamemRNA_P-wetherbeei_contig8891.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig8891.1.1 vs. uniprot
Match: D7G8T7_ECTSI (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T7_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 2.020e-70
Identity = 106/126 (84.13%), Postives = 115/126 (91.27%), Query Frame = 1 
Query:    1 REPPDSGLMSDLMWSDPQPFPGRSPSKRGVGMAFGPDVTAAFLDHNGLELVVRSHEVKEEGYLVEHDGRCITVFSAPNYCDQMGNKGAFIRFGWDLKPRFTQFAAVLHPAIRPMAYAGGFGSAFGL 378
            REPPDSG+MSDLMWSDPQPF GRSPSKRGVGMAFGPDVT AFL+ N L+L+VRSHEVKEEGYLVEHDG+CITVFSAPNYCDQMGNKGAFIRFG DL+P+FT F AV HPA+RPMAYAG FG+  GL
Sbjct:  385 REPPDSGIMSDLMWSDPQPFTGRSPSKRGVGMAFGPDVTKAFLEGNDLKLLVRSHEVKEEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRFGSDLEPQFTTFEAVPHPAVRPMAYAGAFGNVMGL 510
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BLAST of mRNA_P-wetherbeei_contig8891.1.1 vs. uniprot
Match: A0A067C621_SAPPC (Serine/threonine-protein phosphatase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C621_SAPPC)

HSP 1 Score: 226 bits (577), Expect = 5.460e-70
Identity = 105/126 (83.33%), Postives = 112/126 (88.89%), Query Frame = 1 
Query:    1 REPPDSGLMSDLMWSDPQPFPGRSPSKRGVGMAFGPDVTAAFLDHNGLELVVRSHEVKEEGYLVEHDGRCITVFSAPNYCDQMGNKGAFIRFGWDLKPRFTQFAAVLHPAIRPMAYAGGFGSAFGL 378
            REPP+SGLMSDLMWSDPQPFPGR PSKRG+G++FGPDVT AFL HNGLEL+VRSHEVK+EGYLVEHD +CITVFSAPNYCDQMGNKGAFI F  DLKPRFTQF AV HP IRPMAYAG  G  FGL
Sbjct:  369 REPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDVTKAFLAHNGLELLVRSHEVKDEGYLVEHDEKCITVFSAPNYCDQMGNKGAFIHFYKDLKPRFTQFTAVEHPPIRPMAYAGNMGGLFGL 494
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BLAST of mRNA_P-wetherbeei_contig8891.1.1 vs. uniprot
Match: A0A2D4BSX5_PYTIN (Serine/threonine-protein phosphatase n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BSX5_PYTIN)

HSP 1 Score: 225 bits (573), Expect = 2.320e-69
Identity = 101/125 (80.80%), Postives = 113/125 (90.40%), Query Frame = 1 
Query:    1 REPPDSGLMSDLMWSDPQPFPGRSPSKRGVGMAFGPDVTAAFLDHNGLELVVRSHEVKEEGYLVEHDGRCITVFSAPNYCDQMGNKGAFIRFGWDLKPRFTQFAAVLHPAIRPMAYAGGFGSAFG 375
            REPP+SGLMSDLMWSDPQPFPGR PSKRG+G++FGPD+T AFL +N LEL+VRSHEVK+EGYLVEHDG+CITVFSAPNYCDQMGNKGAFIRFG D++P+FTQF AV HP IRPMAYAG  G  FG
Sbjct:  373 REPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDITKAFLAYNNLELLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRFGKDMQPKFTQFTAVEHPPIRPMAYAGNMGGMFG 497
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BLAST of mRNA_P-wetherbeei_contig8891.1.1 vs. uniprot
Match: M4B6M7_HYAAE (Serine/threonine-protein phosphatase n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6M7_HYAAE)

HSP 1 Score: 225 bits (574), Expect = 2.680e-69
Identity = 101/125 (80.80%), Postives = 113/125 (90.40%), Query Frame = 1 
Query:    1 REPPDSGLMSDLMWSDPQPFPGRSPSKRGVGMAFGPDVTAAFLDHNGLELVVRSHEVKEEGYLVEHDGRCITVFSAPNYCDQMGNKGAFIRFGWDLKPRFTQFAAVLHPAIRPMAYAGGFGSAFG 375
             EPP+SGLMSDLMWSDPQPFPGR PSKRG+G++FGPDVT+AFL HN L+L+VRSHEVK+EGYLVEHDG+CITVFSAPNYCDQMGNKGAFIRFG D++P+FTQF AV HP IRPMAYAG  G  FG
Sbjct:  394 HEPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDVTSAFLQHNKLDLLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRFGTDMQPQFTQFVAVEHPPIRPMAYAGNMGGMFG 518
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BLAST of mRNA_P-wetherbeei_contig8891.1.1 vs. uniprot
Match: K3WPM4_GLOUD (Serine/threonine-protein phosphatase n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WPM4_GLOUD)

HSP 1 Score: 224 bits (572), Expect = 3.050e-69
Identity = 102/125 (81.60%), Postives = 112/125 (89.60%), Query Frame = 1 
Query:    1 REPPDSGLMSDLMWSDPQPFPGRSPSKRGVGMAFGPDVTAAFLDHNGLELVVRSHEVKEEGYLVEHDGRCITVFSAPNYCDQMGNKGAFIRFGWDLKPRFTQFAAVLHPAIRPMAYAGGFGSAFG 375
            REPP+SGLMSDLMWSDPQPFPGR PSKRG+G++FGPD+T AFL +N LEL+VRSHEVK+EGYLVEHDG+CITVFSAPNYCDQMGNKGAFIRF  D+KPRFTQF AV HP IRPMAYAG  G  FG
Sbjct:  370 REPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDITKAFLAYNNLELLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRFEKDMKPRFTQFTAVEHPPIRPMAYAGNMGGMFG 494
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BLAST of mRNA_P-wetherbeei_contig8891.1.1 vs. uniprot
Match: A0A485K2X5_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K2X5_9STRA)

HSP 1 Score: 224 bits (570), Expect = 5.780e-69
Identity = 102/126 (80.95%), Postives = 112/126 (88.89%), Query Frame = 1 
Query:    1 REPPDSGLMSDLMWSDPQPFPGRSPSKRGVGMAFGPDVTAAFLDHNGLELVVRSHEVKEEGYLVEHDGRCITVFSAPNYCDQMGNKGAFIRFGWDLKPRFTQFAAVLHPAIRPMAYAGGFGSAFGL 378
            REPP+SGLMSDLMWSDPQPFPGR PSKRG+G++FGPD+T AFL HN L+L+VRSHEVK+EGYLVEHD +CITVFSAPNYCDQMGNKGAFIRF  DLKPRFTQF +V HP IRPMAYAG  G  FGL
Sbjct:  367 REPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDITKAFLAHNNLDLLVRSHEVKDEGYLVEHDEKCITVFSAPNYCDQMGNKGAFIRFFQDLKPRFTQFTSVEHPPIRPMAYAGNMGGLFGL 492
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BLAST of mRNA_P-wetherbeei_contig8891.1.1 vs. uniprot
Match: D0MY18_PHYIT (Serine/threonine-protein phosphatase n=40 Tax=Phytophthora TaxID=4783 RepID=D0MY18_PHYIT)

HSP 1 Score: 222 bits (565), Expect = 3.380e-68
Identity = 101/125 (80.80%), Postives = 112/125 (89.60%), Query Frame = 1 
Query:    1 REPPDSGLMSDLMWSDPQPFPGRSPSKRGVGMAFGPDVTAAFLDHNGLELVVRSHEVKEEGYLVEHDGRCITVFSAPNYCDQMGNKGAFIRFGWDLKPRFTQFAAVLHPAIRPMAYAGGFGSAFG 375
            REPP+SGLMSDLMWSDPQPFPGR PSKRG+G++FGPDVT AFL+ N L+L+VRSHEVK+EGYLVEHDG+CITVFSAPNYCDQMGNKGAFIRF  D++PRFTQF AV HP IRPMAYAG  G  FG
Sbjct:  370 REPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDVTKAFLELNNLDLLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRFERDMQPRFTQFVAVEHPPIRPMAYAGNMGGMFG 494
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BLAST of mRNA_P-wetherbeei_contig8891.1.1 vs. uniprot
Match: A0A6G0XS67_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XS67_9STRA)

HSP 1 Score: 221 bits (564), Expect = 4.440e-68
Identity = 101/126 (80.16%), Postives = 111/126 (88.10%), Query Frame = 1 
Query:    1 REPPDSGLMSDLMWSDPQPFPGRSPSKRGVGMAFGPDVTAAFLDHNGLELVVRSHEVKEEGYLVEHDGRCITVFSAPNYCDQMGNKGAFIRFGWDLKPRFTQFAAVLHPAIRPMAYAGGFGSAFGL 378
            REPP++GLMSDLMWSDPQPFPGR PSKRG+G++FGPD+T  FL HN L+L+VRSHEVK+EGYLVEHD +CITVFSAPNYCDQMGNKGAFIRF  DLKPRFTQF AV HP IRPMAYAG  G  FGL
Sbjct:  366 REPPEAGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDITKQFLAHNNLDLLVRSHEVKDEGYLVEHDEKCITVFSAPNYCDQMGNKGAFIRFFKDLKPRFTQFTAVEHPPIRPMAYAGNMGGLFGL 491
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BLAST of mRNA_P-wetherbeei_contig8891.1.1 vs. uniprot
Match: A0A3M6VTI8_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VTI8_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.370e-67
Identity = 100/125 (80.00%), Postives = 111/125 (88.80%), Query Frame = 1 
Query:    1 REPPDSGLMSDLMWSDPQPFPGRSPSKRGVGMAFGPDVTAAFLDHNGLELVVRSHEVKEEGYLVEHDGRCITVFSAPNYCDQMGNKGAFIRFGWDLKPRFTQFAAVLHPAIRPMAYAGGFGSAFG 375
             EPP+SGLMSDLMWSDPQPF GR PSKRG+G++FGPDVT AFL+HN L+L+VRSHEVK+EGYLVEHDG+CITVFSAPNYCDQMGNKGAFIRF  D++PRFTQF AV HP IRPMAYAG  G  FG
Sbjct:  395 HEPPESGLMSDLMWSDPQPFQGRGPSKRGIGLSFGPDVTKAFLEHNKLDLLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRFEKDMQPRFTQFVAVEHPPIRPMAYAGNMGGMFG 519
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BLAST of mRNA_P-wetherbeei_contig8891.1.1 vs. uniprot
Match: A0A024TYR5_9STRA (Serine/threonine-protein phosphatase n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TYR5_9STRA)

HSP 1 Score: 219 bits (559), Expect = 2.540e-67
Identity = 101/126 (80.16%), Postives = 112/126 (88.89%), Query Frame = 1 
Query:    1 REPPDSGLMSDLMWSDPQPFPGRSPSKRGVGMAFGPDVTAAFLDHNGLELVVRSHEVKEEGYLVEHDGRCITVFSAPNYCDQMGNKGAFIRFGWDLKPRFTQFAAVLHPAIRPMAYAGGFGSAFGL 378
            REPP+SGLMSDLMWSDPQPFPGR PSKRG+G++FGPDVT AFL +N L+L+VRSHEVK+EGYLVEHD +CITVFSAPNYCDQMGNKGAFI+F  DLKPRFT+F AV HP IRPMAYAG  G  FGL
Sbjct:  367 REPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDVTKAFLAYNNLDLLVRSHEVKDEGYLVEHDEKCITVFSAPNYCDQMGNKGAFIQFFRDLKPRFTKFTAVEHPPIRPMAYAGNMGGMFGL 492
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8891.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8T7_ECTSI2.020e-7084.13Protein-serine/threonine phosphatase n=1 Tax=Ectoc... [more]
A0A067C621_SAPPC5.460e-7083.33Serine/threonine-protein phosphatase n=3 Tax=Sapro... [more]
A0A2D4BSX5_PYTIN2.320e-6980.80Serine/threonine-protein phosphatase n=2 Tax=Pythi... [more]
M4B6M7_HYAAE2.680e-6980.80Serine/threonine-protein phosphatase n=2 Tax=Hyalo... [more]
K3WPM4_GLOUD3.050e-6981.60Serine/threonine-protein phosphatase n=2 Tax=Pythi... [more]
A0A485K2X5_9STRA5.780e-6980.95Serine/threonine-protein phosphatase n=1 Tax=Aphan... [more]
D0MY18_PHYIT3.380e-6880.80Serine/threonine-protein phosphatase n=40 Tax=Phyt... [more]
A0A6G0XS67_9STRA4.440e-6880.16Serine/threonine-protein phosphatase n=1 Tax=Aphan... [more]
A0A3M6VTI8_9STRA2.370e-6780.00Serine/threonine-protein phosphatase n=2 Tax=Peron... [more]
A0A024TYR5_9STRA2.540e-6780.16Serine/threonine-protein phosphatase n=4 Tax=Aphan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8891contigP-wetherbeei_contig8891:76..456 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog272952.HpaP801928
PFAMsMetallophos,PPP5,TPR_8
Model size381
Max annot lvl4776|Peronosporales
KEGG koko:K04460
KEGG Pathwayko04010,map04010
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.12e-65
EggNOG OGsCOG0639@1|root,KOG0376@2759|Eukaryota,3QC3G@4776|Peronosporales
EC3.1.3.16
DescriptionPPP5 TPR repeat region
Cds size357
COG categoryT
BRITEko00000,ko00001,ko01000,ko01009
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187064.7896495-UTR-P-wetherbeei_contig8891:75..991683187064.7896495-UTR-P-wetherbeei_contig8891:75..99Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8891 76..99 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187064.8092878-CDS-P-wetherbeei_contig8891:99..4561683187064.8092878-CDS-P-wetherbeei_contig8891:99..456Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8891 100..456 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8891.1.1prot_P-wetherbeei_contig8891.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8891 100..456 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8891.1.1

>prot_P-wetherbeei_contig8891.1.1 ID=prot_P-wetherbeei_contig8891.1.1|Name=mRNA_P-wetherbeei_contig8891.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp
MSDLMWSDPQPFPGRSPSKRGVGMAFGPDVTAAFLDHNGLELVVRSHEVK
EEGYLVEHDGRCITVFSAPNYCDQMGNKGAFIRFGWDLKPRFTQFAAVLH
PAIRPMAYAGGFGSAFGL*
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mRNA from alignment at P-wetherbeei_contig8891:76..456+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8891.1.1 ID=mRNA_P-wetherbeei_contig8891.1.1|Name=mRNA_P-wetherbeei_contig8891.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig8891:76..456+ (Phaeothamnion wetherbeei SAG_119_79)
AGGGAACCACCAGACTCGGGTCTGATGTCAGACCTGATGTGGAGCGACCC
GCAGCCGTTCCCGGGGCGGAGCCCGAGCAAGCGCGGTGTGGGCATGGCCT
TTGGGCCGGACGTCACGGCGGCTTTCCTCGACCATAACGGGCTGGAGCTC
GTGGTGCGGAGCCACGAGGTCAAGGAGGAGGGGTACCTGGTGGAGCACGA
CGGGCGCTGCATCACTGTCTTCAGCGCGCCCAACTACTGCGACCAGATGG
GCAACAAAGGCGCCTTCATCCGCTTCGGATGGGATCTTAAGCCTCGCTTC
ACGCAGTTCGCCGCCGTGCTGCATCCGGCCATACGACCCATGGCCTATGC
CGGCGGATTTGGCTCGGCGTTCGGCCTCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8891:76..456+

>mRNA_P-wetherbeei_contig8891.1.1 ID=mRNA_P-wetherbeei_contig8891.1.1|Name=mRNA_P-wetherbeei_contig8891.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig8891:76..456+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCAGACCTGATGTGGAGCGACCCGCAGCCGTTCCCGGGGCGGAGCCC
GAGCAAGCGCGGTGTGGGCATGGCCTTTGGGCCGGACGTCACGGCGGCTT
TCCTCGACCATAACGGGCTGGAGCTCGTGGTGCGGAGCCACGAGGTCAAG
GAGGAGGGGTACCTGGTGGAGCACGACGGGCGCTGCATCACTGTCTTCAG
CGCGCCCAACTACTGCGACCAGATGGGCAACAAAGGCGCCTTCATCCGCT
TCGGATGGGATCTTAAGCCTCGCTTCACGCAGTTCGCCGCCGTGCTGCAT
CCGGCCATACGACCCATGGCCTATGCCGGCGGATTTGGCTCGGCGTTCGG
CCTCTAG
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