mRNA_P-wetherbeei_contig886.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig886.3.1 vs. uniprot
Match: UPI0008F9D3F0 (origin recognition complex subunit 1 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9D3F0) HSP 1 Score: 79.3 bits (194), Expect = 4.000e-14 Identity = 58/181 (32.04%), Postives = 91/181 (50.28%), Query Frame = 1
Query: 10 LDAAAARCHLSVDAGEMPERKAEMDKIKAFLERRSAAGDGGVLFVCGQPGTGKTRCMAKIAEEVRE-AQKGGGNGFGREPLKFHYVQSLGVAQPAAIFGQIH-------------HLALHGVFQRSAKGKGRRRAGLTVLVLDEADELLKRQTDVLRQLLGWAGGGATSRLVVVGIANDIE 510
+D A A H+S +P RK+E D + FL R+ + GGV+++ G PGTGKT + K+ E +RE A+K +P F V +L V++P + +I +L F RSAK T++++DE D L R+ DV+ +L W +RL+V+ IAN ++
Sbjct: 247 IDEARANLHISAVPKSLPCRKSEFDTVYNFLARKIESQSGGVMYISGVPGTGKTATVHKVIESLREEAEK-----EEIDPFIFIEVNALRVSEPRQAYVKIWKDLTGETVSVPVAQTSLEKKFSRSAKKA-------TIILVDELDYLCNRRQDVIYNILDWTTK-RDARLIVLTIANTMD 414
BLAST of mRNA_P-wetherbeei_contig886.3.1 vs. uniprot
Match: A0A2V0PE46_9CHLO (Origin recognition complex subunit 1 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PE46_9CHLO) HSP 1 Score: 77.4 bits (189), Expect = 1.960e-13 Identity = 59/158 (37.34%), Postives = 80/158 (50.63%), Query Frame = 1
Query: 58 MPERKAEMDKIKAFLERRSAAGDGGVLFVCGQPGTGKTRCMAKIAEEVREAQKGGGNGFGREPLKFHYVQSLGVAQPAAIFGQI------HHLA---LHGVFQRSAKGKGRRRAGLTVLVLDEADELLKRQTDVLRQLLGWA-GGGATSRLVVVGIAN 501
+P R AE ++ AF+E+ + GDGGVL+VCG PGTGKT CM ++ R K G +F + L + P ++ ++ HL Q + G GRRR T++VLDE D L+ R VL L W GA RL VVGI+N
Sbjct: 426 LPCRDAEKRQLAAFVEK-AIRGDGGVLYVCGVPGTGKTACMVEVLASARARAKAAGT-------QFVSLNCLQLPTPQHVYSKLWERLSGQHLGPARARDALQTAFCGSGRRRFS-TLIVLDEIDMLMTRDQAVLYNLFEWPLQPGA--RLSVVGISN 572
BLAST of mRNA_P-wetherbeei_contig886.3.1 vs. uniprot
Match: A0A0D2LX07_9CHLO (Origin recognition complex subunit 1 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LX07_9CHLO) HSP 1 Score: 75.5 bits (184), Expect = 8.740e-13 Identity = 57/155 (36.77%), Postives = 77/155 (49.68%), Query Frame = 1
Query: 58 MPERKAEMDKIKAFLERRSAAGDGGVLFVCGQPGTGKTRCMAKIAEEVREAQKGGGNGFG-----REPLKFHYVQSLGVAQPAAIFGQIH-HLALHGVFQRSAKGKGRRRAGLTVLVLDEADELLKRQTDVLRQLLGWA-GGGATSRLVVVGIAN 501
+P R AE ++ AF+++ + GDGGVL++CG PGTGKT C+ ++ R+ + G F + P H L G AL G F G GRRR T+++LDE D L+ R VL L W GA RL VVGI+N
Sbjct: 250 LPCRDAEKAQLSAFVDK-AVRGDGGVLYICGVPGTGKTACVMEVLAAARQTARAAGTQFVALNCLQLPSPLHVYSKLWERISGQRLGPARAREALQGAF-----GAGRRRFS-TLIILDEIDMLMTRDQAVLYNLFEWPLAPGA--RLAVVGISN 395
BLAST of mRNA_P-wetherbeei_contig886.3.1 vs. uniprot
Match: A0A7J7PNJ0_9CHLO (Origin recognition complex subunit 1 n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PNJ0_9CHLO) HSP 1 Score: 75.5 bits (184), Expect = 9.450e-13 Identity = 55/176 (31.25%), Postives = 87/176 (49.43%), Query Frame = 1
Query: 25 ARCHLSVDAG----EMPERKAEMDKIKAFLERRSAAGDGGVLFVCGQPGTGKTRCMAKIAEEVREAQKGGGNGFGREPLKFHYVQSLGVAQPAAIFGQI------HHL-------ALHGVFQRSAKGKGRRRAGLTVLVLDEADELLKRQTDVLRQLLGWAGGGATSRLVVVGIAN 501
AR H S+ +P R+ E +++ F+ RR+ DGG+L++CG PGTGKT + ++ VR+ +G G+ +F + L + P +F ++ H+ AL +F A RR T++VLDE D L+ + VL QL W SRL ++GI+N
Sbjct: 627 ARLHASLSLACVPASLPCRQEERSRLEGFV-RRALHEDGGILYICGVPGTGKTALVKEVLGGVRDEARGAGS-------QFASINCLQLPSPQHVFSRLWEKLSGQHMGPARARDALMQLFGVGACAGSSRRRYSTIIVLDEIDMLMTKDQAVLYQLFDWPSQPG-SRLAIIGISN 793
BLAST of mRNA_P-wetherbeei_contig886.3.1 vs. uniprot
Match: A0A383WG47_TETOB (Origin recognition complex subunit 1 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WG47_TETOB) HSP 1 Score: 74.3 bits (181), Expect = 2.380e-12 Identity = 55/176 (31.25%), Postives = 85/176 (48.30%), Query Frame = 1
Query: 25 ARCHLSVDAG----EMPERKAEMDKIKAFLERRSAAGDGGVLFVCGQPGTGKTRCMAKIAEEVREAQKGGGNGFGREPLKFHYVQSLGVAQPAAIFGQI------HHL-------ALHGVFQRSAKGKGRRRAGLTVLVLDEADELLKRQTDVLRQLLGWAGGGATSRLVVVGIAN 501
AR H S+ +P R+ E +++ F+ RR+ DGG+L++CG PGTGKT + ++ VRE + G +F + L + P +F ++ H+ AL +F A RR T++VLDE D L+ + VL QL W SRL ++GI+N
Sbjct: 626 ARLHASMSLACVPASLPCRQEERGRLQGFV-RRALHEDGGILYICGVPGTGKTALVKEVLAGVREEARAAGT-------QFASINCLQLPSPQHVFSRLWEKLSGQHMGPARARDALMQLFGVGAGAGSSRRRYSTIIVLDEIDMLMTKDQAVLYQLFDWPSQPG-SRLAIIGISN 792
BLAST of mRNA_P-wetherbeei_contig886.3.1 vs. uniprot
Match: A0A3Q0D086_MESAU (cell division control protein 6 homolog isoform X2 n=2 Tax=Mesocricetus auratus TaxID=10036 RepID=A0A3Q0D086_MESAU) HSP 1 Score: 73.9 bits (180), Expect = 2.530e-12 Identity = 51/156 (32.69%), Postives = 82/156 (52.56%), Query Frame = 1
Query: 58 MPERKAEMDKIKAFLERRSAAGDGGVLFVCGQPGTGKTRCMAKIAEEVREAQKGGGNGFGREPLKFHYVQSLGVAQPAAIFGQIHHLAL-----HGVFQRSAKGKGRRRAGLTVLVLDEADELLKRQTDVLRQLLGWAGGGATSRLVVVGIANDIE 510
+P R+ EM+ I+AFL+ G L++ G PGTGKT C+++I ++++E + GF L ++S PA I +I H + + ++ K + + VLVLDE D+L + DVL L W + SRLV++GIAN ++
Sbjct: 173 LPAREKEMEVIRAFLKEHICGKKAGSLYLSGAPGTGKTACLSRILQDLKEVK-----GFKTVMLNCMSLRSAQAVFPA-IAQEIGHEEICRPAGKDLMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTLFEWPWL-SNSRLVLIGIANTLD 321
BLAST of mRNA_P-wetherbeei_contig886.3.1 vs. uniprot
Match: G3WHU7_SARHA (Cell division control protein n=2 Tax=Sarcophilus harrisii TaxID=9305 RepID=G3WHU7_SARHA) HSP 1 Score: 73.6 bits (179), Expect = 3.980e-12 Identity = 51/160 (31.87%), Postives = 79/160 (49.38%), Query Frame = 1
Query: 58 MPERKAEMDKIKAFLERRSAAGDGGVLFVCGQPGTGKTRCMAKIAEEVREAQKGGGNGFGREPLKFHYVQSLGVAQPAAIFGQI-HHLALHGVFQRSAKGKGRR--------RAGLTVLVLDEADELLKRQTDVLRQLLGWAGGGATSRLVVVGIANDIE 510
+P R+ EMD I+ FL+ + G L+V G PGTGKT C+++I ++V+E K +K + + + A+F I + V + S K R+ + +LVLDE D+L + DVL L W SRLV++GIAN ++
Sbjct: 176 LPAREKEMDVIRHFLKEHISGKKAGSLYVSGAPGTGKTACLSRILQDVKEELK---------DIKIVMLNCMSLRTSQAVFPAIAQEICQERVSKSSGKDLMRKLEKHMTSENTSMILLVLDEMDQLDSKGQDVLYTLFEWPWL-KNSRLVLIGIANSLD 325
BLAST of mRNA_P-wetherbeei_contig886.3.1 vs. uniprot
Match: A0A4X2KVX5_VOMUR (Cell division control protein n=7 Tax=Metatheria TaxID=9263 RepID=A0A4X2KVX5_VOMUR) HSP 1 Score: 69.3 bits (168), Expect = 1.170e-10 Identity = 49/160 (30.63%), Postives = 77/160 (48.12%), Query Frame = 1
Query: 58 MPERKAEMDKIKAFLERRSAAGDGGVLFVCGQPGTGKTRCMAKIAEEVREAQKGGGNGFGREPLKFHYVQSLGVAQPAAIFGQI-HHLALHGVFQRSAKGKGRR--------RAGLTVLVLDEADELLKRQTDVLRQLLGWAGGGATSRLVVVGIANDIE 510
+P R+ EMD I+ FL+ G L+V G PGTGKT C+ +I ++++E E K + + + A+F I + + + S K R+ +A + +LVLDE D+L + DVL L W S LV++GIAN ++
Sbjct: 167 LPAREKEMDVIRHFLKEHICGKKAGSLYVSGAPGTGKTACLNRILQDLKEEL---------EDTKIVVLNCMSLRTSQAVFPAIAQEICQESISKSSGKDLMRKLEKHMTSEKAPMFLLVLDEMDQLDSKGQDVLYTLFEWPWL-RNSHLVLIGIANSLD 316
BLAST of mRNA_P-wetherbeei_contig886.3.1 vs. uniprot
Match: UPI00187C16C6 (cell division control protein 6 homolog n=1 Tax=Artibeus jamaicensis TaxID=9417 RepID=UPI00187C16C6) HSP 1 Score: 65.9 bits (159), Expect = 1.380e-9 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 1
Query: 58 MPERKAEMDKIKAFLERRSAAGDGGVLFVCGQPGTGKTRCMAKIAEEVREAQKGGGNGFGREPLKFHYVQSLGVAQPAAIFGQI-HHLALHGVFQRSAKGKGRR--------RAGLTVLVLDEADELLKRQTDVLRQLLGWAGGGATSRLVVVG 492
+P R+ EMD I+ FL G L++ G PGTGKT C+++I ++++E KG K + + + A+F I + G + + K R+ + + VLVLDE D+L R DVL L W SRLV++G
Sbjct: 193 LPAREKEMDVIRNFLREHICGRKAGSLYLSGAPGTGKTACLSRILQDLKEELKG---------FKTIMLNCMSLRSAQAVFLAIAQEICPEGASRPAGKDVMRKLENHLTAEKGPMVVLVLDEVDQLDSRGQDVLYTLFEWPWLN-DSRLVLIG 336
BLAST of mRNA_P-wetherbeei_contig886.3.1 vs. uniprot
Match: A0A6P7ZJJ6_9AMPH (Cell division control protein n=1 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7ZJJ6_9AMPH) HSP 1 Score: 65.9 bits (159), Expect = 1.850e-9 Identity = 45/155 (29.03%), Postives = 73/155 (47.10%), Query Frame = 1
Query: 67 RKAEMDKIKAFLERRSAAGDGGVLFVCGQPGTGKTRCMAKIAEEVREAQKGGGNGFGREPLKFHYVQSLGVAQPAAIFGQIHHLALHGVFQRSAKGKGRR-------RAGLTVLVLDEADELLKRQTDVLRQLLGWAGGGATSRLVVVGIANDIE 510
R+ E D I+ FL + + G G L++ G PGTGKT C++KI E++++ K + ++ + + IF + AK R+ + +LVLDE D+L + DVL + W SRLV++GIAN ++
Sbjct: 173 REKETDAIRKFLRQHACGGKPGSLYISGAPGTGKTLCLSKILEDLKDELK---------ECRTIFINCMSLRSSQGIFPCVAEGMAEAGKTVGAKDIARKLEKQMTAEGPMVLLVLDEMDQLDNKGHDVLYTVFEWPSL-TNSRLVLIGIANALD 317 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig886.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig886.3.1 >prot_P-wetherbeei_contig886.3.1 ID=prot_P-wetherbeei_contig886.3.1|Name=mRNA_P-wetherbeei_contig886.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp MATLDAAAARCHLSVDAGEMPERKAEMDKIKAFLERRSAAGDGGVLFVCGback to top mRNA from alignment at P-wetherbeei_contig886:124..762- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig886.3.1 ID=mRNA_P-wetherbeei_contig886.3.1|Name=mRNA_P-wetherbeei_contig886.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig886:124..762- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig886:124..762- >mRNA_P-wetherbeei_contig886.3.1 ID=mRNA_P-wetherbeei_contig886.3.1|Name=mRNA_P-wetherbeei_contig886.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig886:124..762- (Phaeothamnion wetherbeei SAG_119_79)back to top |