mRNA_P-wetherbeei_contig8822.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8822.2.1 vs. uniprot
Match: D8LND4_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND4_ECTSI) HSP 1 Score: 207 bits (527), Expect = 5.240e-59 Identity = 104/183 (56.83%), Postives = 131/183 (71.58%), Query Frame = 1
Query: 1 GREPAVPTAVIEAKIVEAARDAARWLAVDDSQWHQAKKFIDDCLIK-PNPAVLRRRGITEEQWLEGKLERIRQAVAADEGLATCRHINRAVLPMDGWTPLHAAAAVGNVAVAEALLESSAAVSAWVVDLQGRTPLALAAERGHADVCAFLRHRMEREASISIVGSGAPVDLAGRTPLGWSVRS 546
G P +P + + IVEAA +AARWLA+DD WHQ KKF+D+C+ PN L RR +T +QW E K++ I+ ++AAD LAT RH+N++ PMDGWTPLHAAAA GNV + LLE VSAW VDLQGRT LALAA GH D+C L+ RME E++ +IVG APVDL+GRTPL WSV++
Sbjct: 173 GTPPRLPRPLADGMIVEAATEAARWLAIDDRTWHQGKKFMDECIADCPNEKNLIRRKLTPDQWRESKIKSIKASIAADPSLATSRHVNKSAFPMDGWTPLHAAAAKGNVEFVKVLLEVPG-VSAWAVDLQGRTALALAAAEGHLDLCLLLKARMEMESADTIVGVNAPVDLSGRTPLAWSVKA 354
BLAST of mRNA_P-wetherbeei_contig8822.2.1 vs. uniprot
Match: A0A6H5KI44_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI44_9PHAE) HSP 1 Score: 207 bits (527), Expect = 1.130e-58 Identity = 105/180 (58.33%), Postives = 129/180 (71.67%), Query Frame = 1
Query: 10 PAVPTAVIEAKIVEAARDAARWLAVDDSQWHQAKKFIDDCLIK-PNPAVLRRRGITEEQWLEGKLERIRQAVAADEGLATCRHINRAVLPMDGWTPLHAAAAVGNVAVAEALLESSAAVSAWVVDLQGRTPLALAAERGHADVCAFLRHRMEREASISIVGSGAPVDLAGRTPLGWSVRS 546
P +P + IVEAA +AARWLAVDD WHQ KKF+D+C+ PN L RR +T EQW E K++ I+ ++AAD LAT RH+N++ PMDGWTPLHAAAA GNV + LLE VSAW VDLQGRT LALAA GH D+C L+ RME E++ +IVG APVDL+GRTPL WSV++
Sbjct: 396 PRLPRPQADGMIVEAATEAARWLAVDDHTWHQGKKFMDECIADCPNEKNLNRRKLTPEQWRESKIKSIKASIAADPSLATSRHVNKSAFPMDGWTPLHAAAAKGNVEFVKVLLEVPG-VSAWAVDLQGRTALALAAAEGHLDLCLLLKARMEMESADTIVGINAPVDLSGRTPLAWSVKA 574
BLAST of mRNA_P-wetherbeei_contig8822.2.1 vs. uniprot
Match: A0A835YR40_9STRA (Phospholipase A(2) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR40_9STRA) HSP 1 Score: 117 bits (293), Expect = 3.560e-27 Identity = 72/158 (45.57%), Postives = 96/158 (60.76%), Query Frame = 1
Query: 130 LIKPNPAVL--RRRGITEEQWLEGKLERIRQAVAADEGLATCRHINRAVLPMDGWTPLHAAAAVGNVAVAEALLE----SSAAVSAWVVDLQGRTPLALAA-----------ERGHADVCAFLRHRMEREASIS--IVGSGAPVDLAGRTPLGWSVRS 546
+I A+L +R+GITEE+W KLE+I + + + A+CR I +A P DGWTPLHAAAA GN++V +ALL+ + +SAW +DLQGRT LA+A +GHADV L RME E + I G+ APVD+AG TPL W +S
Sbjct: 591 VISARQALLNDKRKGITEEEWRSKKLEKILEGLRKNPEFASCRAITKAE-PQDGWTPLHAAAAKGNLSVVQALLDWVGPAGEKISAWELDLQGRTALAVATYKLDDKKAGGGHQGHADVIEHLTLRMEAEDIVGGRITGANAPVDMAGLTPLAWLAKS 747
BLAST of mRNA_P-wetherbeei_contig8822.2.1 vs. uniprot
Match: A0A7S3GXM2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXM2_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.760e-20 Identity = 51/110 (46.36%), Postives = 65/110 (59.09%), Query Frame = 1
Query: 208 IRQAVAADEGLATCRHINRAVLPMDGWTPLHAAAAVGNVAVAEALLESSAAVSAWVVDLQGRTPLALAAERGHADVCAFLRHRMEREASISIVGSGAPVDLAGRTPLGWS 537
+R+ + D LA R L +DG T LH AA+ GNV + ++E VS WV DLQGRTPL +AA++G D C +LR M+ E VG AP DLAG TPLGW+
Sbjct: 108 MRKLLTFDPSLAMSRTTEMNNLAVDGQTILHVAASFGNVEALKIMVEKGKDVSLWVRDLQGRTPLHVAAQKGQQDCCVYLREAMKLEKQRDPVGEDAPTDLAGTTPLGWA 217
BLAST of mRNA_P-wetherbeei_contig8822.2.1 vs. uniprot
Match: A0A7S2RZ40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ40_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 5.580e-14 Identity = 52/116 (44.83%), Postives = 65/116 (56.03%), Query Frame = 1
Query: 205 RIRQAVAADEGLATCRHINRAV-LPMDGWTPLHAAAAVGNVAVAEALLESSAAVSA-WVVDLQGRTPLALAAERGHADVCAFLRHRMEREASISIVGSGAPVDLAGRTPLGWSVRS 546
++R +AAD L T R R DG+T LH AA G+ A E +LE A A W VDLQGRTPL +AAE G C L+ M + S VG+ APVDL+G TP W+ R+
Sbjct: 112 KLRARLAADPSLITTRVSTRLDGRHRDGFTLLHTAAECGHTAAIETILEFDEAPRAIWSVDLQGRTPLHIAAEAGKLRACRLLKEAMIQNGQ-SPVGASAPVDLSGLTPAAWNARA 226
BLAST of mRNA_P-wetherbeei_contig8822.2.1 vs. uniprot
Match: A0A7S0CFM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CFM1_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.220e-7 Identity = 42/108 (38.89%), Postives = 52/108 (48.15%), Query Frame = 1
Query: 280 DGWTPLHAAAAVGNVAVAEALLESSAAVSAWVVD----------------LQGRTPLALAAERGHADVCAFLRHRMEREASISIV---GSGAPVDLAGRTPLGWSVRS 546
DG+ PLH+ A GN+ LLE S + LQGRT L +AAERG+ ++ FLR I +V G APVDL GRTPLGW+ S
Sbjct: 18 DGFAPLHSCANAGNLDGIRILLELGGLQSRTGDNEADEEAPPRLSTNDRCLQGRTALHIAAERGYLEIVTFLR-------DIEVVCPIGEDAPVDLIGRTPLGWAAAS 118
BLAST of mRNA_P-wetherbeei_contig8822.2.1 vs. uniprot
Match: A0A3Q0SZC3_AMPCI (Uncharacterized protein n=1 Tax=Amphilophus citrinellus TaxID=61819 RepID=A0A3Q0SZC3_AMPCI) HSP 1 Score: 51.2 bits (121), Expect = 3.580e-5 Identity = 26/58 (44.83%), Postives = 33/58 (56.90%), Query Frame = 1
Query: 283 GWTPLHAAAAVGNVAVAEALLESSAAVSAWVVDLQGRTPLALAAERGHADVCAFLRHR 456
GWTPLHAAA G+ A+ L E + +D++GRTPL LAA+ GH L R
Sbjct: 22 GWTPLHAAACEGHRAICAVLTEQGSMARVGEMDIEGRTPLILAAQEGHWSTVKLLLDR 79 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8822.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8822.2.1 >prot_P-wetherbeei_contig8822.2.1 ID=prot_P-wetherbeei_contig8822.2.1|Name=mRNA_P-wetherbeei_contig8822.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=182bp GREPAVPTAVIEAKIVEAARDAARWLAVDDSQWHQAKKFIDDCLIKPNPAback to top mRNA from alignment at P-wetherbeei_contig8822:1461..2688+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8822.2.1 ID=mRNA_P-wetherbeei_contig8822.2.1|Name=mRNA_P-wetherbeei_contig8822.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1228bp|location=Sequence derived from alignment at P-wetherbeei_contig8822:1461..2688+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8822:1461..2688+ >mRNA_P-wetherbeei_contig8822.2.1 ID=mRNA_P-wetherbeei_contig8822.2.1|Name=mRNA_P-wetherbeei_contig8822.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig8822:1461..2688+ (Phaeothamnion wetherbeei SAG_119_79)back to top |