mRNA_P-wetherbeei_contig8811.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8811.1.1 vs. uniprot
Match: D8LBK0_ECTSI (Bromodomain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK0_ECTSI) HSP 1 Score: 202 bits (515), Expect = 7.620e-55 Identity = 106/212 (50.00%), Postives = 130/212 (61.32%), Query Frame = 1
Query: 1 RRTVERLRRCQFLLNRLCCYPDIMAFLERIDPDEVPGYETIIPRPMYLRLVGERLRRHPDAAGAGRGGGYVSEHAFAMDMRLVWSNAKRFNQEGSPLWAAADALSAEFERLFCEWVLNPPDSELR--TGHRPLAGPWNAWKHLQFFDGANGCPGCGRLVDGGGGGHDHGRXXXXXXXXXXXXEHAVEAAGRAMELGVVRCESCEDEWHAGCL 630
RRTV RL RC+ +LNRLCC D++AFLE +DP EVPGY T I RP+++RLV +RL+R GGYV+E AFA D+RL WSNAK FN+EGS LW AAD LS EFE LFCEWV+NPPD R G+ P GPW+ W+ L++FD C GC + G E A A ++M +V C +CEDEWHA CL
Sbjct: 544 RRTVFRLVRCKSVLNRLCCNEDVIAFLESVDPAEVPGYHTKITRPVHMRLVDQRLKR----------GGYVNEFAFASDVRLAWSNAKLFNREGSELWLAADRLSREFEALFCEWVINPPDGYGRGTQGNAPARGPWDDWQELRYFDNLQRCRGCAKAATKG----------KSAAAAVTTAEEAETARRKSMPPELV-CSACEDEWHAICL 734
BLAST of mRNA_P-wetherbeei_contig8811.1.1 vs. uniprot
Match: A0A6H5KEY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEY2_9PHAE) HSP 1 Score: 199 bits (507), Expect = 1.480e-54 Identity = 105/212 (49.53%), Postives = 128/212 (60.38%), Query Frame = 1
Query: 1 RRTVERLRRCQFLLNRLCCYPDIMAFLERIDPDEVPGYETIIPRPMYLRLVGERLRRHPDAAGAGRGGGYVSEHAFAMDMRLVWSNAKRFNQEGSPLWAAADALSAEFERLFCEWVLNPPDSELR--TGHRPLAGPWNAWKHLQFFDGANGCPGCGRLVDGGGGGHDHGRXXXXXXXXXXXXEHAVEAAGRAMELGVVRCESCEDEWHAGCL 630
RRTV RL RC+ +LNRLCC D +AFLE +DP EVPGY T I RP+++RLV +RL+R GGY++E AFA D+RL WSNAK FN+EGS LW AAD LS EFE LFCEWV+NPPD R G+ P G W+ W+ L++FD GC GC + E A A ++M +V C SCEDEWHA CL
Sbjct: 568 RRTVFRLVRCKSVLNRLCCNEDAIAFLESVDPAEVPGYHTKITRPVHMRLVDQRLKR----------GGYLNEFAFASDVRLAWSNAKLFNREGSELWLAADRLSREFEALFCEWVINPPDGYGRGTQGNAPARGTWDDWQELRYFDNLKGCRGCAKAST----------KVKSAAAAVTTAEEAETARRKSMPPELV-CSSCEDEWHAICL 758
BLAST of mRNA_P-wetherbeei_contig8811.1.1 vs. uniprot
Match: A0A836CNY5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNY5_9STRA) HSP 1 Score: 163 bits (412), Expect = 4.080e-41 Identity = 88/218 (40.37%), Postives = 120/218 (55.05%), Query Frame = 1
Query: 1 RRTVERLRRCQFLLNRLCCYPDIMAFLERIDPDEVPGYETIIPRPMYLRLVGERLRRHPDAAGAGRGGGYVSEHAFAMDMRLVWSNAKRFNQEGSPLWAAADALSAEFERLFCEWVLNPPDS--ELRTGH-RPLAGPWNAWKHLQFFDGANGCPGCGRLVDGGGGGHDHGRXXXXXXXXXXXXEHAVEAAGRAMELGVVRCESCEDEWHAGCLSLHLQ 645
R + RLRRC+ +LN +CC+ DI FLE +DP E P Y ++ RP+Y+RLV ERL+ G YV+E +FA DMRL ++NA+R+N EGS LW AA A++ +FER+F +WV+ P D+ + +G R G W+ W+ L++FD GC C R A EAA A E + C SCED WHA CL +Q
Sbjct: 573 RLSANRLRRCKAVLNAVCCHADINPFLEAVDPAEAPDYALVVRRPVYMRLVDERLKA----------GMYVNEFSFAADMRLAFANAQRYNAEGSELWRAAAAIARDFERMFLQWVVAPADAGVDASSGEPRAPRGAWDDWEVLRYFDAVPGCAKCERAA--------------------AARPRAAEAALEAEEALLPLCCSCEDRWHAACLPKSIQ 760
BLAST of mRNA_P-wetherbeei_contig8811.1.1 vs. uniprot
Match: R1E9T5_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E9T5_EMIHU) HSP 1 Score: 77.0 bits (188), Expect = 5.550e-12 Identity = 50/130 (38.46%), Postives = 62/130 (47.69%), Query Frame = 1
Query: 19 LRRCQFLLNRLCCYPDIMAFLERIDPD--EVPGYETIIPRPMYLRLVGERLRRHPDAAGAGRGGGYVSEHAFAMDMRLVWSNAKRFNQEGSPLWAAADALSAEFERLFCEWVLNPPDSELRTGHRPLAGP 402
L +C+ LL P FL +DP +P Y T+I PM L V +RL R Y F DMRLVWSNA R+N G+P+ AAA ALSAEFE+ + P TG +P P
Sbjct: 302 LGQCRSLLRPFLQMPQARDFLAPVDPVALNIPDYPTVITHPMDLGTVEQRLDRKE----------YTDAGGFVRDMRLVWSNAIRYNPVGTPVHAAAAALSAEFEKRLLATI--EPAFAGPTGDQPRPAP 419
BLAST of mRNA_P-wetherbeei_contig8811.1.1 vs. uniprot
Match: A0A0H5R5I7_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R5I7_9EUKA) HSP 1 Score: 72.8 bits (177), Expect = 3.130e-11 Identity = 47/133 (35.34%), Postives = 65/133 (48.87%), Query Frame = 1
Query: 28 CQFLLNRLCCYPDIMAFLERIDPDE--VPGYETIIPRPMYLRLVGERLRRHPDAAGAGRGGGYVSEHAFAMDMRLVWSNAKRFNQEGSPLWAAADALSAEFERLFCEWVLNPPD-------SELRTGHRPLAG 399
C +L + PD FL+ +D +E +P Y +I PM L V +L G Y +E+ FA D+R VW NAK++NQ GS ++ AADALS F+R + V+ P SE P AG
Sbjct: 34 CMPILKFIASKPDAEPFLDPVDWEELGIPDYPEVIKVPMDLGTVKAKLED----------GKYETENDFAADVRRVWDNAKKYNQPGSGIYVAADALSKLFDRRMQKVVVKKPTENGSPAASEAPAAPTPSAG 156
BLAST of mRNA_P-wetherbeei_contig8811.1.1 vs. uniprot
Match: A0A7S0MCI0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MCI0_9CRYP) HSP 1 Score: 69.3 bits (168), Expect = 2.420e-10 Identity = 46/132 (34.85%), Postives = 60/132 (45.45%), Query Frame = 1
Query: 37 LLNRLCCYPDIMAFLERIDPD--EVPGYETIIPRPMYLRLVGERLRRHPDAAGAGRGGGYVSEHAFAMDMRLVWSNAKRFNQEGSPLWAAADALSAEFERLFCEWVLNPPDSELRTGHRPLAGPWNAWKHLQ 426
+LNRL FLE +DP E+ Y II PM L V ERL G Y + F D+RLV+SNA R+N EG +W+AA AL F+ +C D + + G P K +Q
Sbjct: 68 ILNRLIRSKHSWPFLEPVDPVALELEDYFEIITSPMDLGTVKERLTS----------GQYSTRAEFEGDVRLVFSNAMRYNNEGDEIWSAAQALVELFDSAWCPHAAARDDDDAQMGRAPTVRKPGKRKSMQ 189
BLAST of mRNA_P-wetherbeei_contig8811.1.1 vs. uniprot
Match: A0A7S3JU45_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU45_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 8.090e-10 Identity = 41/133 (30.83%), Postives = 65/133 (48.87%), Query Frame = 1
Query: 37 LLNRLCCYPDIMAFLERIDPDEVP--GYETIIPRPMYLRLVGERLRRHPDAAGAGRGGGYVSEHAFAMDMRLVWSNAKRFNQEGSPLWAAADALSAEFERLFCEWVLNPPDSELRTGHRPLAGPWNAWKHLQF 429
++++L D + FLE +D + Y +I +PM L V +++ + Y S HA A D+RLVWSN K++NQ+GS + A++LS FE F + P E T H P + H+ +
Sbjct: 7 IVDKLMKRQDAVPFLEPVDWQGLGLVDYPKMIKKPMDLGTVKKKIEENE----------YASVHACAEDIRLVWSNCKKYNQDGSDFFNLAESLSKRFEDQFAKVKAEDPMIEDDTEHAPSLEEKTKFSHMIY 129
BLAST of mRNA_P-wetherbeei_contig8811.1.1 vs. uniprot
Match: W2R286_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2R286_PHYPN) HSP 1 Score: 68.2 bits (165), Expect = 6.360e-9 Identity = 43/117 (36.75%), Postives = 64/117 (54.70%), Query Frame = 1
Query: 19 LRRCQFLLNRLCCYPDIMAFLERIDPDEVPGYETIIPRPMYLRLVGERLRRHP---DAAGAGRGGGYVSEHAFAMDMRLVWSNAKRFNQEGSPLWAAADALSAEFERLFCEWVLNPP 360
L RC +++ L +P FL ++ VP Y ++ +PM L + +L++ D+ A G + FA D+RL+WSN K FN +GS + AAD LSA FERL+ E + PP
Sbjct: 920 LDRCLKIVSCLKSHPFSKPFLTPVE--NVPMYTRVVKQPMDLSKIENKLKKGAYVVDSNMAASGAKKLDVTHFANDIRLMWSNCKLFNDDGSGITRAADILSAGFERLYKESI-EPP 1033
BLAST of mRNA_P-wetherbeei_contig8811.1.1 vs. uniprot
Match: UPI001CC6A044 (LOW QUALITY PROTEIN: nuclear body protein SP140-like protein n=1 Tax=Dromiciops gliroides TaxID=33562 RepID=UPI001CC6A044) HSP 1 Score: 67.8 bits (164), Expect = 7.360e-9 Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 1
Query: 13 ERLRRCQFLLNRLCCYPDIMAFLERIDPDEVPGYETIIPRPMYLRLVGERLRRHPDAAGAGRGGGYVSEHAFAMDMRLVWSNAKRFNQEGSPLWAAADALSAEFERLF 336
E+ +C+FLL ++ CY + + F E DP + Y + PM+L LV ERLR Y + F +DMRL++SN K+FN+ + L A+FER F
Sbjct: 552 EQQLKCEFLLLKMYCYTESIIFTE--DPSYIKNYSNHVREPMWLNLVKERLRDET----------YNTVEGFVLDMRLIFSNCKKFNKNNQ-FGILGEKLEAKFERDF 646
BLAST of mRNA_P-wetherbeei_contig8811.1.1 vs. uniprot
Match: A0A7S0LQV9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LQV9_9EUKA) HSP 1 Score: 62.4 bits (150), Expect = 8.590e-9 Identity = 38/106 (35.85%), Postives = 54/106 (50.94%), Query Frame = 1
Query: 16 RLRRCQFLLNRLCCYPDIMAFLERIDPDE--VPGYETIIPRPMYLRLVGERLRRHPDAAGAGRGGGYVSEHAFAMDMRLVWSNAKRFNQEGSPLWAAADALSAEFE 327
R+ +C L L P FL +DP +P Y TII PM L + +L+ H Y + F D+RLVW+NA+++N + + + A A ALSAEFE
Sbjct: 4 RMSQCAQLHKLLVQLPIAGPFLSPVDPVALGIPDYPTIIKEPMDLGSIETKLKTHK----------YKNSGEFVNDVRLVWTNARKYNPKETAIHADAAALSAEFE 99 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8811.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8811.1.1 >prot_P-wetherbeei_contig8811.1.1 ID=prot_P-wetherbeei_contig8811.1.1|Name=mRNA_P-wetherbeei_contig8811.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp RRTVERLRRCQFLLNRLCCYPDIMAFLERIDPDEVPGYETIIPRPMYLRLback to top mRNA from alignment at P-wetherbeei_contig8811:261..2386+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8811.1.1 ID=mRNA_P-wetherbeei_contig8811.1.1|Name=mRNA_P-wetherbeei_contig8811.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2126bp|location=Sequence derived from alignment at P-wetherbeei_contig8811:261..2386+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8811:261..2386+ >mRNA_P-wetherbeei_contig8811.1.1 ID=mRNA_P-wetherbeei_contig8811.1.1|Name=mRNA_P-wetherbeei_contig8811.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig8811:261..2386+ (Phaeothamnion wetherbeei SAG_119_79)back to top |