mRNA_P-wetherbeei_contig8808.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8808.3.1
Unique NamemRNA_P-wetherbeei_contig8808.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: A0A5J6MGG3_9PROT (Type-4 uracil-DNA glycosylase n=2 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MGG3_9PROT)

HSP 1 Score: 292 bits (747), Expect = 1.170e-95
Identity = 167/281 (59.43%), Postives = 200/281 (71.17%), Query Frame = 1
Query:    1 GPGPMDDLATLRWLVEAGADEALLEAPLDRFT-APPPAAIPVR---------APARAPVARLVPEI--PAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKI 807
            G  P + LA L W +EAGADEAL  AP+DRF  A  PA  P R         APA    A L P +  PA P               +A  AA AA++LEEL+ AL +FEGC LKATATNLVFADGNPAA++MLVGEAPG DEDR G+PFVGVSGQLLDRMLAA+GLDRT VYITNVI WRPP NRTP+ AE+AACLPFV+RHI LV P++L+LVG  +AKTLL   +GI ++RG+W  Y++  M   +P LP YHPAYLLR P+QKRD+WRDLL I++++
Sbjct:   14 GLDPAEALALLAWQIEAGADEALDAAPIDRFALAAEPA--PARRSXXXXXXXAPALMTAAVLPPPLATPAGPPPGAVTGDG------NAYRAAQAAQSLEELRAALESFEGCPLKATATNLVFADGNPAARVMLVGEAPGGDEDRVGRPFVGVSGQLLDRMLAAVGLDRTQVYITNVIFWRPPGNRTPTPAEVAACLPFVERHIELVGPELLILVGNAAAKTLLLRNEGITRIRGKWFEYQSAGMSRPVPTLPIYHPAYLLRAPAQKRDAWRDLLQIRERL 286          
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: UPI001AE9E425 (uracil-DNA glycosylase n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001AE9E425)

HSP 1 Score: 289 bits (740), Expect = 1.220e-94
Identity = 160/281 (56.94%), Postives = 193/281 (68.68%), Query Frame = 1
Query:   16 DDLATLRWLVEAGADEALLEAPLDRFT------------APPP---AAIPVRAPARAPVARLVPEIPAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKIAN 813
            D LA LRW  + G DEA+ + P D  T            APPP   AA P   PA  P A      PAA                SAR  A  ARTLEEL++AL AF+GC LKATA N VFADGNP A++ML+GEAPG DEDRQGKPFVGVSG+LLDRMLA IGLDRT+VYI+N++PWRPP NR+P+ AEIAACLPF++RH+ L+ P+VLV +G  SAKTLL  A+GI +LRG+W  Y +P +P  +PV+P  HPAYLLR P  KR++WRDLL++KQKI N
Sbjct:   11 DILAALRWHADIGCDEAISDEPTDWTTFAARPAVARAPMAPPPGGGAARPGATPAATPRAASYAPAPAA-----SQPLGASEAGASARARAKEARTLEELESALRAFDGCPLKATAMNTVFADGNPDARVMLIGEAPGEDEDRQGKPFVGVSGKLLDRMLAQIGLDRTNVYISNILPWRPPGNRSPTQAEIAACLPFLERHVELIGPKVLVPLGGTSAKTLLNRAEGITRLRGQWFDYSSPGLPGSVPVIPMLHPAYLLRNPIAKREAWRDLLALKQKILN 286          
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: UPI00187335FF (uracil-DNA glycosylase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI00187335FF)

HSP 1 Score: 283 bits (724), Expect = 4.810e-92
Identity = 155/278 (55.76%), Postives = 188/278 (67.63%), Query Frame = 1
Query:    4 PGPMDDLATLRWLVEAGADEALLEAPLDRFTAPPPAAIPVRAPARAP--------------VARLVPEIPAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSI 795
            P   D L  L+W +EAGADEA+   PLDR TA  PAA P R  A AP                 L P++P +                SA+  AA A+T+EE++ AL  FEGC LKATATNL   DGNP A+IM++GEAPGA EDRQGKPFVG +GQLLDRMLA IGLDRT VYITN++ WRPP NR P+ AEIA+CLPF++R I ++ P++L+LVG +SAKTLL   +GI+KLRGRW  Y  P +   IP LPT HPAYLLRQP+QKR++WRDLLS 
Sbjct:    5 PSEQDFLEALKWQIEAGADEAIGALPLDR-TAARPAAAPSRGMAEAPXXXXXXXXXXXXXXAQSLAPQVPPSRARPAPSLTSASEAQASAQRLAATAKTIEEIRRALEDFEGCPLKATATNLCMFDGNPEARIMIIGEAPGAQEDRQGKPFVGPAGQLLDRMLATIGLDRTKVYITNLLYWRPPGNRNPTPAEIASCLPFLERQIEVLQPRLLLLVGGMSAKTLLHRTEGILKLRGRWADYHHPRLEQPIPALPTLHPAYLLRQPAQKREAWRDLLSF 281          
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: A0A512DYY0_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DYY0_9PROT)

HSP 1 Score: 281 bits (718), Expect = 1.960e-91
Identity = 154/273 (56.41%), Postives = 189/273 (69.23%), Query Frame = 1
Query:   16 DDLATLRWLVEAGADEALLEAPLDRFTAPPPAAIPVRAPAR-APVARLVPEI--------PAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKI 807
            D +A LRW ++ GADEA+ ++P D     P  A P  A A+ +P  R VP          P  P               +ART AA A TLE+L+ A+AAF+GCALKATATNLVFADGNP A++ML+GEAPG DEDRQG PFVG SG+LLD ML  IGLDR SVYITN++PWRPP NR P+  EI ACLPFV+RHI L+ P+ L+L+G  SA  LL+ ++GIM+LRGRW  +    M A IPVLPTYHPA+LLRQP+ KRDSWRDL++ K+K 
Sbjct:    3 DIVALLRWHIDVGADEAISDSPTDWTKVAPRVAQPSPASAQPSPQGRNVPAKAGGGAAAQPRRPGPAQPALLGTPAAGATARTMAAEAHTLEDLRAAMAAFDGCALKATATNLVFADGNPKARLMLIGEAPGEDEDRQGLPFVGKSGKLLDMMLKCIGLDRDSVYITNILPWRPPGNRKPNPNEIQACLPFVERHIELIAPEGLMLLGGTSASALLDRSEGIMRLRGRWLEFSPTPMAAPIPVLPTYHPAFLLRQPAMKRDSWRDLVAFKKKF 275          
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: A0A3N1L118_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1L118_9PROT)

HSP 1 Score: 280 bits (716), Expect = 3.450e-91
Identity = 151/268 (56.34%), Postives = 190/268 (70.90%), Query Frame = 1
Query:   10 PMDDLATLRWLVEAGADEALLEAPLDRFTAPPPA-AIPVRAPARA-PVARLVPEIPAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKI 807
            P + LA L+W +  GADEA+ E   DR    PPA A+    PA A P A + P                     ++   AAAA  L +L+ A+ AFEGCAL+ TATN VFADGNPAA++M++GEAPGADEDRQGKPFVGVSG+LLDRML AIGLDR S YITN++PWRPP NRTP+AAEIA CLPFV+RH+ALV+P +LV VG +SA T+L+ ++GIMKLRGRW  YRT +    I  +  +HPA+LLR P++KRD+WRDLLSI+ ++
Sbjct:    3 PEEALALLQWQIAIGADEAIGETAPDRTAVRPPAPAVQPAGPAAARPPAAVQPGPSTVLPMRRPGPVAALPVGATSADVAAAAMDLAQLQAAMEAFEGCALRRTATNTVFADGNPAARVMVIGEAPGADEDRQGKPFVGVSGRLLDRMLGAIGLDRNSAYITNILPWRPPGNRTPTAAEIAMCLPFVRRHVALVDPAILVFVGGVSASTMLDRSEGIMKLRGRWHQYRTDEGNKTIDAMCVFHPAFLLRTPARKRDAWRDLLSIQARL 270          
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: A0A7X2FU42_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FU42_9PROT)

HSP 1 Score: 280 bits (715), Expect = 3.630e-91
Identity = 151/262 (57.63%), Postives = 181/262 (69.08%), Query Frame = 1
Query:   25 ATLRWLVEAGADEALLEAPLDRFTAPPPAAIPVRAPARAPVARLVPEIPAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKIA 810
            A LRW ++AG DE + EA  DR+   PPAA      A +PV+                         +AR  AAAA  L EL+ A+AAF+GC+LK TATNLVF DGNP A +M++GEAPGA+EDRQGKPFVG SGQLL+ M+A+IGLDRTS YITN++PWRPP NR PSAAEI+AC PFV RHI LV P++LV VG  +AKTLLET DG+MKLRGRW  Y  P   A IP    +HPA+LLR P+QKR SWRDLL I+ K+A
Sbjct:    9 ALLRWYIDAGVDETIEEAVQDRYAVVPPAA------AISPVSPAGERSATVTSMVGARGAPVSPDEATARQMAAAAGNLMELRDAIAAFDGCSLKGTATNLVFGDGNPQADVMMIGEAPGAEEDRQGKPFVGASGQLLNLMMASIGLDRTSFYITNILPWRPPGNRQPSAAEISACRPFVDRHIELVAPKLLVFVGGTAAKTLLETNDGVMKLRGRWFDYSLPSGNAKIPATAIFHPAFLLRSPAQKRQSWRDLLVIRDKLA 264          
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: A0A2D7JLX8_9PROT (Type-4 uracil-DNA glycosylase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D7JLX8_9PROT)

HSP 1 Score: 279 bits (713), Expect = 9.830e-91
Identity = 150/265 (56.60%), Postives = 184/265 (69.43%), Query Frame = 1
Query:   25 ATLRWLVEAGADEALLEAPLDRFTAPPPAAIPVRAPARAPVARLVPEIPAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKIANNI 819
            A L W +  GADEAL E  ++RF A PPAA           +       A P                AR  AAAA  L  L+ AL  FEGC LKATA+NLVFADGNPAA +ML+GEAPG DEDRQG+PFVGVSGQLLDRMLA+IGLDR + YITN++PWRPP NR P+AAE+AACLPF+QRHIALV P+VLV VG  SAKTLL  ++GIM+LRGRW  ++ P++   IP L  +HPAYLLR P+QK  +WRDLL++++++A  +
Sbjct:    8 AALAWQLALGADEALNETAINRFAAAPPAAXXXXXXXAPLPSXXXXXXXAVPRAIRAAKGTPPDTGAEARQLAAAAMDLPALRQALENFEGCGLKATASNLVFADGNPAAPLMLIGEAPGGDEDRQGRPFVGVSGQLLDRMLASIGLDRDACYITNMLPWRPPGNRQPTAAELAACLPFLQRHIALVAPRVLVFVGGTSAKTLLGKSEGIMRLRGRWYDFKLPEVDEAIPALAMFHPAYLLRSPAQKALAWRDLLALQERLATAV 272          
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: A0A848ZA63_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848ZA63_9PROT)

HSP 1 Score: 274 bits (701), Expect = 4.720e-90
Identity = 131/192 (68.23%), Postives = 161/192 (83.85%), Query Frame = 1
Query:  250 ARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKIANNIEQ 825
            A+TL+EL+ AL  FEGCALK TATNLVFADGNPAA++MLVGEAPGA+EDRQG PFVG SG+LLDRMLA IGLDRTSVYITN++PWRPP NR P+AAEIA CLPF +RHIAL +P++L+L G  +AKT+L TA+GI ++RGRW  +  P M A +P +  YHPAYLLRQP+QKRD+WRDLL+IK+++    E+
Sbjct:    1 AKTLDELRAALTGFEGCALKRTATNLVFADGNPAAEVMLVGEAPGAEEDRQGLPFVGTSGRLLDRMLACIGLDRTSVYITNILPWRPPGNRQPTAAEIAVCLPFAERHIALKHPRLLILAGGTAAKTILGTAEGITRMRGRWTDHTIPGMSAPVPTVAIYHPAYLLRQPAQKRDAWRDLLAIKRRLGEMRER 192          
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: UPI00141ECCC8 (uracil-DNA glycosylase n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI00141ECCC8)

HSP 1 Score: 275 bits (703), Expect = 4.930e-89
Identity = 156/271 (57.56%), Postives = 196/271 (72.32%), Query Frame = 1
Query:    4 PGPMDDLATLRWLVEAGADEALLEAPLDRFTAPPPA----AIPVRAPARAPV-ARLVPEI--PAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSI 795
            P P   LA L+WL++AGADEA+ E PLDR   P P     A  ++  A+AP  A + P+   PA  XXXXXX          A+  A AA ++EE++ AL  F+GC LKATATNL   DGNP A+IM++GEAPGA EDRQGKPFVG +GQ+LDRMLAAIGLDR+ VYITN++ WRPP NR P+ AEIAACLPF++R + L+ P++L+L G +SAKTLL  ++GI++LRGRW  YR P M   IP LPT HPAYLLRQP+QKR++WRDLL+ 
Sbjct:    6 PDPAASLAALQWLIDAGADEAVGEVPLDRTALPDPRRQTRASSLQTGAQAPKSATMTPKTASPAXXXXXXXXLASASETQADAQRLAQAANSVEEIRQALERFDGCPLKATATNLCLYDGNPQARIMIIGEAPGAQEDRQGKPFVGPAGQMLDRMLAAIGLDRSQVYITNLLYWRPPGNRNPTPAEIAACLPFLERQVELLAPKLLLLTGGMSAKTLLNKSEGILRLRGRWDDYRHPRMGETIPALPTLHPAYLLRQPAQKREAWRDLLAF 276          
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: UPI000490C84D (uracil-DNA glycosylase n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI000490C84D)

HSP 1 Score: 275 bits (702), Expect = 5.750e-89
Identity = 156/287 (54.36%), Postives = 188/287 (65.51%), Query Frame = 1
Query:   10 PMDDLATLRWLVEAGADEALLEAPLD--RFTAPP------------------PAAIPVRAPARAPVARLVPEIPAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKIA 810
            P D L  LRW V+ G+DEA+ + P D  R  A P                  PAA     P RAP     P +PA                VSAR  A AA+TLEEL+ A+ AF+GC LKATA + VFADGNPAA++MLVGEAPG DEDRQGKPFVG SG+LLDRMLA IGLDRT VYITN++PWRPP NR P+AAEIAACLPF++RH+ LV P V+V +G  SAKTLL T  GI +LRGRW  Y        +P++P  HPAYLLR P  KR++WRDLL++K+++A
Sbjct:    4 PYDMLDALRWHVDVGSDEAIADEPTDWTRLAARPAVARAPQGGGGPGGQAGRPAAQAPXXPRRAP-----PPVPAP-----GTPLGASEAGVSARNRARAAQTLEELEAAVRAFDGCPLKATAMSTVFADGNPAARVMLVGEAPGEDEDRQGKPFVGASGRLLDRMLACIGLDRTGVYITNILPWRPPGNRNPTAAEIAACLPFLERHVDLVRPAVVVALGGTSAKTLLNTTAGITRLRGRWHEYTPEGAGRPLPLMPMLHPAYLLRNPIAKREAWRDLLTLKERLA 280          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J6MGG3_9PROT1.170e-9559.43Type-4 uracil-DNA glycosylase n=2 Tax=Hypericibact... [more]
UPI001AE9E4251.220e-9456.94uracil-DNA glycosylase n=1 Tax=Azospirillum soli T... [more]
UPI00187335FF4.810e-9255.76uracil-DNA glycosylase n=1 Tax=Pelagibius sp. NBU2... [more]
A0A512DYY0_9PROT1.960e-9156.41Type-4 uracil-DNA glycosylase n=1 Tax=Skermanella ... [more]
A0A3N1L118_9PROT3.450e-9156.34Type-4 uracil-DNA glycosylase n=1 Tax=Stella humos... [more]
A0A7X2FU42_9PROT3.630e-9157.63Type-4 uracil-DNA glycosylase n=1 Tax=Alphaproteob... [more]
A0A2D7JLX8_9PROT9.830e-9156.60Type-4 uracil-DNA glycosylase n=2 Tax=Rhodospirill... [more]
A0A848ZA63_9PROT4.720e-9068.23Type-4 uracil-DNA glycosylase n=1 Tax=Inquilinus s... [more]
UPI00141ECCC84.930e-8957.56uracil-DNA glycosylase n=1 Tax=Pelagibius litorali... [more]
UPI000490C84D5.750e-8954.36uracil-DNA glycosylase n=1 Tax=Azospirillum halopr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8808contigP-wetherbeei_contig8808:1529..2362 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121033.AUCF01000032_gene2613
PFAMsUDG
Model size834
Max annot lvl204441|Rhodospirillales
KEGG koko:K21929
KEGG Pathwayko03410,map03410
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.55e-88
EggNOG OGsCOG1573@1|root,COG1573@2|Bacteria,1MWX1@1224|Proteobacteria,2TT4Q@28211|Alphaproteobacteria,2JRPG@204441|Rhodospirillales
EC3.2.2.27
DescriptionUracil-DNA glycosylase
Cds size822
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187060.6802483-CDS-P-wetherbeei_contig8808:1528..23501683187060.6802483-CDS-P-wetherbeei_contig8808:1528..2350Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8808 1529..2350 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187060.6918774-UTR-P-wetherbeei_contig8808:2350..23621683187060.6918774-UTR-P-wetherbeei_contig8808:2350..2362Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8808 2351..2362 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8808.3.1prot_P-wetherbeei_contig8808.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8808 1529..2350 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8808.3.1

>prot_P-wetherbeei_contig8808.3.1 ID=prot_P-wetherbeei_contig8808.3.1|Name=mRNA_P-wetherbeei_contig8808.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp
MDDLATLRWLVEAGADEALLEAPLDRFTAPPPAAIPVRAPARAPVARLVP
EIPAAPAATLAAPQPAAQAVVSARTAAAAARTLEELKTALAAFEGCALKA
TATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIG
LDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVG
AISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQ
KRDSWRDLLSIKQKIANNIEQYK*
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mRNA from alignment at P-wetherbeei_contig8808:1529..2362-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8808.3.1 ID=mRNA_P-wetherbeei_contig8808.3.1|Name=mRNA_P-wetherbeei_contig8808.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig8808:1529..2362- (Phaeothamnion wetherbeei SAG_119_79)
GGTCCCGGCCCGATGGACGACCTCGCCACCCTGCGCTGGCTGGTCGAGGC CGGGGCCGACGAGGCGCTCCTCGAAGCCCCGCTCGACCGGTTCACGGCCC CGCCGCCCGCCGCGATTCCGGTCCGGGCCCCGGCGCGTGCACCCGTCGCC CGCCTTGTCCCGGAAATCCCGGCTGCCCCCGCCGCTACGCTCGCCGCTCC CCAGCCGGCGGCCCAGGCCGTCGTTTCCGCTCGCACGGCCGCGGCGGCCG CCCGGACGCTCGAAGAACTGAAAACGGCCCTTGCCGCCTTCGAGGGCTGT GCGCTGAAGGCCACCGCCACCAATCTCGTCTTCGCCGACGGCAATCCGGC GGCGAAAATCATGCTGGTCGGCGAAGCGCCCGGCGCCGACGAGGACCGGC AGGGCAAACCTTTCGTCGGCGTGTCGGGCCAGCTCCTCGACCGGATGCTC GCCGCGATCGGCCTCGACCGGACCAGTGTCTATATAACGAACGTCATCCC CTGGCGGCCCCCCGCCAACCGGACGCCGAGTGCTGCCGAAATCGCCGCCT GCCTGCCCTTCGTGCAGCGGCACATCGCGCTCGTGAACCCGCAAGTCCTT GTTCTGGTAGGGGCGATTTCGGCAAAGACGCTTCTGGAGACAGCCGACGG GATCATGAAGCTTCGGGGCCGCTGGCGGACCTACCGGACCCCGGACATGC CGGCCGACATCCCCGTGTTGCCGACTTATCACCCTGCCTATTTGTTGCGC CAGCCTTCCCAAAAAAGGGATTCGTGGCGCGATTTATTGTCGATCAAACA AAAGATCGCGAACAATATCGAACAATATAAATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8808:1529..2362-

>mRNA_P-wetherbeei_contig8808.3.1 ID=mRNA_P-wetherbeei_contig8808.3.1|Name=mRNA_P-wetherbeei_contig8808.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig8808:1529..2362- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGACCTCGCCACCCTGCGCTGGCTGGTCGAGGCCGGGGCCGACGA
GGCGCTCCTCGAAGCCCCGCTCGACCGGTTCACGGCCCCGCCGCCCGCCG
CGATTCCGGTCCGGGCCCCGGCGCGTGCACCCGTCGCCCGCCTTGTCCCG
GAAATCCCGGCTGCCCCCGCCGCTACGCTCGCCGCTCCCCAGCCGGCGGC
CCAGGCCGTCGTTTCCGCTCGCACGGCCGCGGCGGCCGCCCGGACGCTCG
AAGAACTGAAAACGGCCCTTGCCGCCTTCGAGGGCTGTGCGCTGAAGGCC
ACCGCCACCAATCTCGTCTTCGCCGACGGCAATCCGGCGGCGAAAATCAT
GCTGGTCGGCGAAGCGCCCGGCGCCGACGAGGACCGGCAGGGCAAACCTT
TCGTCGGCGTGTCGGGCCAGCTCCTCGACCGGATGCTCGCCGCGATCGGC
CTCGACCGGACCAGTGTCTATATAACGAACGTCATCCCCTGGCGGCCCCC
CGCCAACCGGACGCCGAGTGCTGCCGAAATCGCCGCCTGCCTGCCCTTCG
TGCAGCGGCACATCGCGCTCGTGAACCCGCAAGTCCTTGTTCTGGTAGGG
GCGATTTCGGCAAAGACGCTTCTGGAGACAGCCGACGGGATCATGAAGCT
TCGGGGCCGCTGGCGGACCTACCGGACCCCGGACATGCCGGCCGACATCC
CCGTGTTGCCGACTTATCACCCTGCCTATTTGTTGCGCCAGCCTTCCCAA
AAAAGGGATTCGTGGCGCGATTTATTGTCGATCAAACAAAAGATCGCGAA
CAATATCGAACAATATAAATAA
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