mRNA_P-wetherbeei_contig8808.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: A0A5J6MGG3_9PROT (Type-4 uracil-DNA glycosylase n=2 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MGG3_9PROT) HSP 1 Score: 292 bits (747), Expect = 1.170e-95 Identity = 167/281 (59.43%), Postives = 200/281 (71.17%), Query Frame = 1
Query: 1 GPGPMDDLATLRWLVEAGADEALLEAPLDRFT-APPPAAIPVR---------APARAPVARLVPEI--PAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKI 807
G P + LA L W +EAGADEAL AP+DRF A PA P R APA A L P + PA P +A AA AA++LEEL+ AL +FEGC LKATATNLVFADGNPAA++MLVGEAPG DEDR G+PFVGVSGQLLDRMLAA+GLDRT VYITNVI WRPP NRTP+ AE+AACLPFV+RHI LV P++L+LVG +AKTLL +GI ++RG+W Y++ M +P LP YHPAYLLR P+QKRD+WRDLL I++++
Sbjct: 14 GLDPAEALALLAWQIEAGADEALDAAPIDRFALAAEPA--PARRSXXXXXXXAPALMTAAVLPPPLATPAGPPPGAVTGDG------NAYRAAQAAQSLEELRAALESFEGCPLKATATNLVFADGNPAARVMLVGEAPGGDEDRVGRPFVGVSGQLLDRMLAAVGLDRTQVYITNVIFWRPPGNRTPTPAEVAACLPFVERHIELVGPELLILVGNAAAKTLLLRNEGITRIRGKWFEYQSAGMSRPVPTLPIYHPAYLLRAPAQKRDAWRDLLQIRERL 286
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: UPI001AE9E425 (uracil-DNA glycosylase n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001AE9E425) HSP 1 Score: 289 bits (740), Expect = 1.220e-94 Identity = 160/281 (56.94%), Postives = 193/281 (68.68%), Query Frame = 1
Query: 16 DDLATLRWLVEAGADEALLEAPLDRFT------------APPP---AAIPVRAPARAPVARLVPEIPAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKIAN 813
D LA LRW + G DEA+ + P D T APPP AA P PA P A PAA SAR A ARTLEEL++AL AF+GC LKATA N VFADGNP A++ML+GEAPG DEDRQGKPFVGVSG+LLDRMLA IGLDRT+VYI+N++PWRPP NR+P+ AEIAACLPF++RH+ L+ P+VLV +G SAKTLL A+GI +LRG+W Y +P +P +PV+P HPAYLLR P KR++WRDLL++KQKI N
Sbjct: 11 DILAALRWHADIGCDEAISDEPTDWTTFAARPAVARAPMAPPPGGGAARPGATPAATPRAASYAPAPAA-----SQPLGASEAGASARARAKEARTLEELESALRAFDGCPLKATAMNTVFADGNPDARVMLIGEAPGEDEDRQGKPFVGVSGKLLDRMLAQIGLDRTNVYISNILPWRPPGNRSPTQAEIAACLPFLERHVELIGPKVLVPLGGTSAKTLLNRAEGITRLRGQWFDYSSPGLPGSVPVIPMLHPAYLLRNPIAKREAWRDLLALKQKILN 286
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: UPI00187335FF (uracil-DNA glycosylase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI00187335FF) HSP 1 Score: 283 bits (724), Expect = 4.810e-92 Identity = 155/278 (55.76%), Postives = 188/278 (67.63%), Query Frame = 1
Query: 4 PGPMDDLATLRWLVEAGADEALLEAPLDRFTAPPPAAIPVRAPARAP--------------VARLVPEIPAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSI 795
P D L L+W +EAGADEA+ PLDR TA PAA P R A AP L P++P + SA+ AA A+T+EE++ AL FEGC LKATATNL DGNP A+IM++GEAPGA EDRQGKPFVG +GQLLDRMLA IGLDRT VYITN++ WRPP NR P+ AEIA+CLPF++R I ++ P++L+LVG +SAKTLL +GI+KLRGRW Y P + IP LPT HPAYLLRQP+QKR++WRDLLS
Sbjct: 5 PSEQDFLEALKWQIEAGADEAIGALPLDR-TAARPAAAPSRGMAEAPXXXXXXXXXXXXXXAQSLAPQVPPSRARPAPSLTSASEAQASAQRLAATAKTIEEIRRALEDFEGCPLKATATNLCMFDGNPEARIMIIGEAPGAQEDRQGKPFVGPAGQLLDRMLATIGLDRTKVYITNLLYWRPPGNRNPTPAEIASCLPFLERQIEVLQPRLLLLVGGMSAKTLLHRTEGILKLRGRWADYHHPRLEQPIPALPTLHPAYLLRQPAQKREAWRDLLSF 281
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: A0A512DYY0_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DYY0_9PROT) HSP 1 Score: 281 bits (718), Expect = 1.960e-91 Identity = 154/273 (56.41%), Postives = 189/273 (69.23%), Query Frame = 1
Query: 16 DDLATLRWLVEAGADEALLEAPLDRFTAPPPAAIPVRAPAR-APVARLVPEI--------PAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKI 807
D +A LRW ++ GADEA+ ++P D P A P A A+ +P R VP P P +ART AA A TLE+L+ A+AAF+GCALKATATNLVFADGNP A++ML+GEAPG DEDRQG PFVG SG+LLD ML IGLDR SVYITN++PWRPP NR P+ EI ACLPFV+RHI L+ P+ L+L+G SA LL+ ++GIM+LRGRW + M A IPVLPTYHPA+LLRQP+ KRDSWRDL++ K+K
Sbjct: 3 DIVALLRWHIDVGADEAISDSPTDWTKVAPRVAQPSPASAQPSPQGRNVPAKAGGGAAAQPRRPGPAQPALLGTPAAGATARTMAAEAHTLEDLRAAMAAFDGCALKATATNLVFADGNPKARLMLIGEAPGEDEDRQGLPFVGKSGKLLDMMLKCIGLDRDSVYITNILPWRPPGNRKPNPNEIQACLPFVERHIELIAPEGLMLLGGTSASALLDRSEGIMRLRGRWLEFSPTPMAAPIPVLPTYHPAFLLRQPAMKRDSWRDLVAFKKKF 275
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: A0A3N1L118_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1L118_9PROT) HSP 1 Score: 280 bits (716), Expect = 3.450e-91 Identity = 151/268 (56.34%), Postives = 190/268 (70.90%), Query Frame = 1
Query: 10 PMDDLATLRWLVEAGADEALLEAPLDRFTAPPPA-AIPVRAPARA-PVARLVPEIPAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKI 807
P + LA L+W + GADEA+ E DR PPA A+ PA A P A + P ++ AAAA L +L+ A+ AFEGCAL+ TATN VFADGNPAA++M++GEAPGADEDRQGKPFVGVSG+LLDRML AIGLDR S YITN++PWRPP NRTP+AAEIA CLPFV+RH+ALV+P +LV VG +SA T+L+ ++GIMKLRGRW YRT + I + +HPA+LLR P++KRD+WRDLLSI+ ++
Sbjct: 3 PEEALALLQWQIAIGADEAIGETAPDRTAVRPPAPAVQPAGPAAARPPAAVQPGPSTVLPMRRPGPVAALPVGATSADVAAAAMDLAQLQAAMEAFEGCALRRTATNTVFADGNPAARVMVIGEAPGADEDRQGKPFVGVSGRLLDRMLGAIGLDRNSAYITNILPWRPPGNRTPTAAEIAMCLPFVRRHVALVDPAILVFVGGVSASTMLDRSEGIMKLRGRWHQYRTDEGNKTIDAMCVFHPAFLLRTPARKRDAWRDLLSIQARL 270
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: A0A7X2FU42_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FU42_9PROT) HSP 1 Score: 280 bits (715), Expect = 3.630e-91 Identity = 151/262 (57.63%), Postives = 181/262 (69.08%), Query Frame = 1
Query: 25 ATLRWLVEAGADEALLEAPLDRFTAPPPAAIPVRAPARAPVARLVPEIPAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKIA 810
A LRW ++AG DE + EA DR+ PPAA A +PV+ +AR AAAA L EL+ A+AAF+GC+LK TATNLVF DGNP A +M++GEAPGA+EDRQGKPFVG SGQLL+ M+A+IGLDRTS YITN++PWRPP NR PSAAEI+AC PFV RHI LV P++LV VG +AKTLLET DG+MKLRGRW Y P A IP +HPA+LLR P+QKR SWRDLL I+ K+A
Sbjct: 9 ALLRWYIDAGVDETIEEAVQDRYAVVPPAA------AISPVSPAGERSATVTSMVGARGAPVSPDEATARQMAAAAGNLMELRDAIAAFDGCSLKGTATNLVFGDGNPQADVMMIGEAPGAEEDRQGKPFVGASGQLLNLMMASIGLDRTSFYITNILPWRPPGNRQPSAAEISACRPFVDRHIELVAPKLLVFVGGTAAKTLLETNDGVMKLRGRWFDYSLPSGNAKIPATAIFHPAFLLRSPAQKRQSWRDLLVIRDKLA 264
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: A0A2D7JLX8_9PROT (Type-4 uracil-DNA glycosylase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D7JLX8_9PROT) HSP 1 Score: 279 bits (713), Expect = 9.830e-91 Identity = 150/265 (56.60%), Postives = 184/265 (69.43%), Query Frame = 1
Query: 25 ATLRWLVEAGADEALLEAPLDRFTAPPPAAIPVRAPARAPVARLVPEIPAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKIANNI 819
A L W + GADEAL E ++RF A PPAA + A P AR AAAA L L+ AL FEGC LKATA+NLVFADGNPAA +ML+GEAPG DEDRQG+PFVGVSGQLLDRMLA+IGLDR + YITN++PWRPP NR P+AAE+AACLPF+QRHIALV P+VLV VG SAKTLL ++GIM+LRGRW ++ P++ IP L +HPAYLLR P+QK +WRDLL++++++A +
Sbjct: 8 AALAWQLALGADEALNETAINRFAAAPPAAXXXXXXXAPLPSXXXXXXXAVPRAIRAAKGTPPDTGAEARQLAAAAMDLPALRQALENFEGCGLKATASNLVFADGNPAAPLMLIGEAPGGDEDRQGRPFVGVSGQLLDRMLASIGLDRDACYITNMLPWRPPGNRQPTAAELAACLPFLQRHIALVAPRVLVFVGGTSAKTLLGKSEGIMRLRGRWYDFKLPEVDEAIPALAMFHPAYLLRSPAQKALAWRDLLALQERLATAV 272
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: A0A848ZA63_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848ZA63_9PROT) HSP 1 Score: 274 bits (701), Expect = 4.720e-90 Identity = 131/192 (68.23%), Postives = 161/192 (83.85%), Query Frame = 1
Query: 250 ARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKIANNIEQ 825
A+TL+EL+ AL FEGCALK TATNLVFADGNPAA++MLVGEAPGA+EDRQG PFVG SG+LLDRMLA IGLDRTSVYITN++PWRPP NR P+AAEIA CLPF +RHIAL +P++L+L G +AKT+L TA+GI ++RGRW + P M A +P + YHPAYLLRQP+QKRD+WRDLL+IK+++ E+
Sbjct: 1 AKTLDELRAALTGFEGCALKRTATNLVFADGNPAAEVMLVGEAPGAEEDRQGLPFVGTSGRLLDRMLACIGLDRTSVYITNILPWRPPGNRQPTAAEIAVCLPFAERHIALKHPRLLILAGGTAAKTILGTAEGITRMRGRWTDHTIPGMSAPVPTVAIYHPAYLLRQPAQKRDAWRDLLAIKRRLGEMRER 192
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: UPI00141ECCC8 (uracil-DNA glycosylase n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI00141ECCC8) HSP 1 Score: 275 bits (703), Expect = 4.930e-89 Identity = 156/271 (57.56%), Postives = 196/271 (72.32%), Query Frame = 1
Query: 4 PGPMDDLATLRWLVEAGADEALLEAPLDRFTAPPPA----AIPVRAPARAPV-ARLVPEI--PAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSI 795
P P LA L+WL++AGADEA+ E PLDR P P A ++ A+AP A + P+ PA XXXXXX A+ A AA ++EE++ AL F+GC LKATATNL DGNP A+IM++GEAPGA EDRQGKPFVG +GQ+LDRMLAAIGLDR+ VYITN++ WRPP NR P+ AEIAACLPF++R + L+ P++L+L G +SAKTLL ++GI++LRGRW YR P M IP LPT HPAYLLRQP+QKR++WRDLL+
Sbjct: 6 PDPAASLAALQWLIDAGADEAVGEVPLDRTALPDPRRQTRASSLQTGAQAPKSATMTPKTASPAXXXXXXXXLASASETQADAQRLAQAANSVEEIRQALERFDGCPLKATATNLCLYDGNPQARIMIIGEAPGAQEDRQGKPFVGPAGQMLDRMLAAIGLDRSQVYITNLLYWRPPGNRNPTPAEIAACLPFLERQVELLAPKLLLLTGGMSAKTLLNKSEGILRLRGRWDDYRHPRMGETIPALPTLHPAYLLRQPAQKREAWRDLLAF 276
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Match: UPI000490C84D (uracil-DNA glycosylase n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI000490C84D) HSP 1 Score: 275 bits (702), Expect = 5.750e-89 Identity = 156/287 (54.36%), Postives = 188/287 (65.51%), Query Frame = 1
Query: 10 PMDDLATLRWLVEAGADEALLEAPLD--RFTAPP------------------PAAIPVRAPARAPVARLVPEIPAAPXXXXXXXXXXXXXXVSARTAAAAARTLEELKTALAAFEGCALKATATNLVFADGNPAAKIMLVGEAPGADEDRQGKPFVGVSGQLLDRMLAAIGLDRTSVYITNVIPWRPPANRTPSAAEIAACLPFVQRHIALVNPQVLVLVGAISAKTLLETADGIMKLRGRWRTYRTPDMPADIPVLPTYHPAYLLRQPSQKRDSWRDLLSIKQKIA 810
P D L LRW V+ G+DEA+ + P D R A P PAA P RAP P +PA VSAR A AA+TLEEL+ A+ AF+GC LKATA + VFADGNPAA++MLVGEAPG DEDRQGKPFVG SG+LLDRMLA IGLDRT VYITN++PWRPP NR P+AAEIAACLPF++RH+ LV P V+V +G SAKTLL T GI +LRGRW Y +P++P HPAYLLR P KR++WRDLL++K+++A
Sbjct: 4 PYDMLDALRWHVDVGSDEAIADEPTDWTRLAARPAVARAPQGGGGPGGQAGRPAAQAPXXPRRAP-----PPVPAP-----GTPLGASEAGVSARNRARAAQTLEELEAAVRAFDGCPLKATAMSTVFADGNPAARVMLVGEAPGEDEDRQGKPFVGASGRLLDRMLACIGLDRTGVYITNILPWRPPGNRNPTAAEIAACLPFLERHVDLVRPAVVVALGGTSAKTLLNTTAGITRLRGRWHEYTPEGAGRPLPLMPMLHPAYLLRNPIAKREAWRDLLTLKERLA 280 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8808.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8808.3.1 >prot_P-wetherbeei_contig8808.3.1 ID=prot_P-wetherbeei_contig8808.3.1|Name=mRNA_P-wetherbeei_contig8808.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp MDDLATLRWLVEAGADEALLEAPLDRFTAPPPAAIPVRAPARAPVARLVPback to top mRNA from alignment at P-wetherbeei_contig8808:1529..2362- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8808.3.1 ID=mRNA_P-wetherbeei_contig8808.3.1|Name=mRNA_P-wetherbeei_contig8808.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig8808:1529..2362- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8808:1529..2362- >mRNA_P-wetherbeei_contig8808.3.1 ID=mRNA_P-wetherbeei_contig8808.3.1|Name=mRNA_P-wetherbeei_contig8808.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig8808:1529..2362- (Phaeothamnion wetherbeei SAG_119_79)back to top |