mRNA_P-wetherbeei_contig8707.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8707.1.1
Unique NamemRNA_P-wetherbeei_contig8707.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8707.1.1 vs. uniprot
Match: D8LR85_ECTSI (Protein translocase subunit SecA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR85_ECTSI)

HSP 1 Score: 504 bits (1298), Expect = 8.220e-169
Identity = 261/374 (69.79%), Postives = 300/374 (80.21%), Query Frame = 1
Query:    1 VLRFLGLSVGLVQAGSPMDARRAAYACDVTYVTNQELGFDLLRDHLAVAPEQVVQVRPLAFAVVDEADSILIDEARTPLIISRRVAAPTRKYATAAKLAGILQKGTHYTVNEKEQSVVLTDKGFTDVERALGKSMFDPRDPWAPFVLAAVKAKELYRRDREYIVADSEVQIVDAFSGRVLDGRRFSDGLHQAIEAKEGIAVGMQSQVTAQITYQSLFRGFEKLSGMTGTAITDANEFQKIYGLSVVPARRDYPDVVFRTKAAALRAMLNEVERVHKDGRPVLIGTTSVRASDAV---LNARPDLVQRESEIVAQAGRRGVVTVATNMAGRGTDILLGGNPAMMARLYVRDALAQVLLSEEDLGKVPLAAPGFYP 1113
            V RFLGLSVGL+Q+  P   R+ AY+CDVTY TNQELGFD LRDHL V  +  VQ +   F +VDEADSILIDEARTPLIISR V AP +K+AT+ K+A +L+KG HYTV+EKEQSVVLTDKG+ D +R LGKSMFDPRDPWAPF++ +VKAKE++ RD+EYIV D+EV IVD FSGRVL+GRR+SDGLHQ+IEAKEGI V  QSQV AQ+TYQ+LFR F KL GMTGTA+TDANE    YGL VV  R  +PDVVFR +  A  AMLNEVER+HKDGRPVLIGTT+V  SD     LNA PDLV+RESEIV QAGR GVVTVATNMAGRGTDILLGGNP++MAR+ VRDALA  LLS+EDL  VP     F+P
Sbjct:  178 VHRFLGLSVGLIQSTMPEAQRKEAYSCDVTYATNQELGFDYLRDHLTVTQDGTVQTKDFFFCLVDEADSILIDEARTPLIISRSVDAPAQKFATSQKIASVLEKGVHYTVSEKEQSVVLTDKGYDDCDRILGKSMFDPRDPWAPFIINSVKAKEIFTRDKEYIVRDTEVLIVDTFSGRVLEGRRYSDGLHQSIEAKEGITVSKQSQVMAQVTYQALFRSFPKLCGMTGTAMTDANELGTTYGLQVVQERL-FPDVVFRNREGANAAMLNEVERLHKDGRPVLIGTTNVGMSDQTAKTLNANPDLVERESEIVGQAGRLGVVTVATNMAGRGTDILLGGNPSVMARIRVRDALAAELLSDEDLAAVPKVGETFFP 550          
BLAST of mRNA_P-wetherbeei_contig8707.1.1 vs. uniprot
Match: A0A835ZJ09_9STRA (Protein translocase subunit SecA n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ09_9STRA)

HSP 1 Score: 469 bits (1207), Expect = 3.120e-154
Identity = 245/392 (62.50%), Postives = 305/392 (77.81%), Query Frame = 1
Query:    1 VLRFLGLSVGLVQAGSPMDARRAAYACDVTYVTNQELGFDLLRDHLAVAPEQVVQVRPLAFAVVDEADSILIDEARTPLIISRRVAAPTRKYATAAKLAGILQKGTHYTVNEKEQSVVLTDKGFTDVERALGKSMFDPRDPWAPFVLAAVKAKELYRRDREYIVADSEVQIVDAFSGRVLDGRRFSDGLHQAIEAKEGIAVGMQSQVTAQITYQSLFRGFEKLSGMTGTAITDANEFQKIYGLSV--VP-----ARRDYPDVVFRTKAAALRAMLNEVERVHKD-GRPVLIGTTSVRASDA-------------VLNARPDLVQRESEIVAQAGRRGVVTVATNMAGRGTDILLGGNPAMMARLYVRDALAQVLLSEEDLGKVPLAAPGFYP 1113
            V RFLGL+VGLVQA     ARRAAYACDVTYVTNQELGFD LRD+LAV+   V QV+P  + +VDEADSILIDEARTPLIIS++V AP +K+A AAK++GIL+KG HY V EKEQ V++TD+GF D ++ LGKSMFD  D WAP+++ ++KAKEL+ +D+EYIV D +VQIVD+FSGRVL+GRR+SDGLHQ++EAKEG+ V  Q ++TAQ+TYQSLFR F +L+GM+GTA TDA EF+  YGL V  +P     ARRDYPD V+RT+ A+LRA+L EVER H++ GRP+LIGTTSV  S+              VLNA+P  V+RE+EIVAQAGR+G VTVATNMAGRGTDI+LGG+PA+MARL +R ALA+  L   +   +P  A  FYP
Sbjct:  227 VHRFLGLTVGLVQAEMDTAARRAAYACDVTYVTNQELGFDYLRDNLAVSEAGVAQVKPFHYCLVDEADSILIDEARTPLIISKQVPAPKQKFALAAKISGILKKGMHYDVKEKEQMVIMTDRGFADTQKMLGKSMFDAADAWAPYIINSLKAKELFAKDKEYIVKDGQVQIVDSFSGRVLEGRRYSDGLHQSLEAKEGLEVSTQGKITAQVTYQSLFRSFPRLAGMSGTAATDAREFENTYGLLVLRIPTALPLARRDYPDAVYRTRDASLRALLGEVERQHEEEGRPILIGTTSVEMSELIAKELQERGVKCEVLNAKPGSVEREAEIVAQAGRKGRVTVATNMAGRGTDIILGGSPAVMARLRLRAALAERHLEAAERAALPAPADSFYP 618          
BLAST of mRNA_P-wetherbeei_contig8707.1.1 vs. uniprot
Match: A0A7S3Y5Q6_HETAK (Protein translocase subunit SecA n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5Q6_HETAK)

HSP 1 Score: 437 bits (1125), Expect = 1.260e-142
Identity = 234/391 (59.85%), Postives = 283/391 (72.38%), Query Frame = 1
Query:    1 VLRFLGLSVGLVQAGSPMDARRAAYACDVTYVTNQELGFDLLRDHLAVAPEQVVQVRPLAFAVVDEADSILIDEARTPLIISRRVAAPTRKYATAAKLAGILQKGTHYTVNEKEQSVVLTDKGFTDVERALGKSMFDPRDPWAPFVLAAVKAKELYRRDREYIVADSEVQIVDAFSGRVLDGRRFSDGLHQAIEAKEGIAVGMQSQVTAQITYQSLFRGFEKLSGMTGTAITDANEFQKIYGLSVVP-------ARRDYPDVVFRTKAAALRAMLNEVERVHKDGRPVLIGTTSVRASDAV-------------LNARPDLVQRESEIVAQAGRRGVVTVATNMAGRGTDILLGGNPAMMARLYVRDALAQVLLSEEDLGKVPLAAPGFYP 1113
            V RFLGLSVGLVQ  S  + RRAAYACDVTY+TN ELGFD LRD+LA+ P +VVQ RP  F +VDEADSILIDEARTPLIIS +V  P  K+  +AK+  +LQK  HY V+EK Q+V  T++G TD    L K +FDP DPWA ++  AVKAKEL+    EYIV D EV IVD FSGRVL+GRRF+DGLHQA+EAKEG+A+  QS+V   +TYQSLF+ F  L+GM+GTA T+A E ++IY L VV        ARRDY DV++RTK A +RA+L EV RVH+ G PVLIGTTSV  S+AV             LNA+P  + RE+E+VAQAGR G VTVATNMAGRGTDILLGGNPA MAR+ +R+  A+ + SE++L   P   PGFYP
Sbjct:  216 VHRFLGLSVGLVQGPSTPEQRRAAYACDVTYLTNAELGFDYLRDNLAMTPGEVVQGRPFNFCLVDEADSILIDEARTPLIISEQVDGPKVKFENSAKIVNVLQKDYHYVVDEKGQTVQFTEEGMTDCANILKKDLFDPNDPWAAYLQNAVKAKELFAAGNEYIVRDGEVAIVDQFSGRVLEGRRFADGLHQALEAKEGLAITKQSKVIGTVTYQSLFKSFPVLAGMSGTAKTEAAELEEIYELEVVQVPTALPVARRDYDDVIYRTKEAKVRALLGEVARVHELGEPVLIGTTSVEDSEAVAAQLREEGIEVAVLNAKPGNIDREAEVVAQAGRVGRVTVATNMAGRGTDILLGGNPAAMARIQLRNTFAKEVASEQELAMCPDVGPGFYP 606          
BLAST of mRNA_P-wetherbeei_contig8707.1.1 vs. uniprot
Match: A0A7R9YGE3_9STRA (Protein translocase subunit SecA (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGE3_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 1.200e-133
Identity = 217/386 (56.22%), Postives = 282/386 (73.06%), Query Frame = 1
Query:    7 RFLGLSVGLVQAGSPMDARRAAYACDVTYVTNQELGFDLLRDHLAVAPEQVVQVR-PLAFAVVDEADSILIDEARTPLIISRRVAAPTRKYATAAKLAGILQKGTHYTVNEKEQSVVLTDKGFTDVERALG-KSMFDPRDPWAPFVLAAVKAKELYRRDREYIVADSEVQIVDAFSGRVLDGRRFSDGLHQAIEAKEGIAVGMQSQVTAQITYQSLFRGFEKLSGMTGTAITDANEFQKIYGLSVVP-------ARRDYPDVVFRTKAAALRAMLNEVERVHKDGRPVLIGTTSVRASD--------------AVLNARPDLVQRESEIVAQAGRRGVVTVATNMAGRGTDILLGGNPAMMARLYVRDALAQVLLSEE--DLGKVP 1089
            R LGL+VGLV+AG   + R  AY CD+TYV N E+GFD LRD+LA+ P+QV   R PL + +VDEADSILIDEARTPL+I+++ AAP +KY  A KLA  L+   HY V+ K ++V LTD+G+ D  RALG + +FDP+DPWAPF++ AVKAKEL++RD +YIV D EV I+D+FSGRVL+GRR+SDGLHQ++EAKEGI V  QSQVTA +TYQ+LF+ F KLSGM+GTAI+   EF  +YGL V+P       ARRDYP VV++T     +A+  ++  +   GRPVL+GTTSV +S+              A+LNA+P+  +RE+ IVAQAGR G VTV+TNMAGRGTDI+LGGN   +ARLYVRD LA+  LS +  +L ++P
Sbjct:  185 RVLGLTVGLVEAGMDEEERAEAYGCDITYVNNAEIGFDYLRDNLALEPQQVCLTRRPLNYCIVDEADSILIDEARTPLVIAKKAAAPGQKYDAATKLAAALKDSVHYEVDLKGKTVELTDRGYEDAARALGGRDLFDPKDPWAPFIVNAVKAKELFKRDVDYIVKDDEVLIIDSFSGRVLEGRRWSDGLHQSVEAKEGIIVDSQSQVTATVTYQNLFKMFPKLSGMSGTAISSELEFLDVYGLKVLPIPTNLPVARRDYPTVVYKTVPGKFKAVARDIASMKDSGRPVLVGTTSVESSEMLVEALEEQGVEDVAILNAKPEAAKREAAIVAQAGRLGAVTVSTNMAGRGTDIILGGNAGQIARLYVRDVLARRALSADPNELQQIP 570          
BLAST of mRNA_P-wetherbeei_contig8707.1.1 vs. uniprot
Match: W7TYL7_9STRA (Protein translocase subunit SecA n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYL7_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 6.250e-133
Identity = 223/380 (58.68%), Postives = 274/380 (72.11%), Query Frame = 1
Query:    1 VLRFLGLSVGLVQAGSPMDARRAAYACDVTYVTNQELGFDLLRDHLAVAPEQ-VVQVRPL--AFAVVDEADSILIDEARTPLIISRRVAAPTRKYATAAKLAGILQKGTHYTVNEKEQSVVLTDKGFTDVERALGKSMFDPRDPWAPFVLAAVKAKELYRRDREYIVADSEVQIVDAFSGRVLDGRRFSDGLHQAIEAKEGIAVGMQSQVTAQITYQSLFRGFEKLSGMTGTAITDANEFQKIYGLSVVP-------ARRDYPDVVFRTKAAALRAMLNEVERVHKDGRPVLIGTTSVRASDA-------------VLNARPDLVQRESEIVAQAGRRGVVTVATNMAGRGTDILLGGNPAMMARLYVRDALAQVLLSEE 1071
            V RFLGLSVGL+Q G     RR AYACDVTYVTN ELGFD LRD+LA+  ++ V++ RPL  AF +VDEADSILIDEARTPLIIS+++ AP  KY  A KL   L+ G HY V+EK Q+VVLTD+G  D E+ LGKS+FD +DPW  FV   +KAKEL  RD++YIV   ++ IVD FSGRVL+GR++SDGL Q+I+ KEG+    QSQV A ITYQSLFR F KL+GMTGTA+TD  +F   Y L VV        AR+DYPD +FR+K   LRA+L E  R HK G+P+LIGTTSV  S+              VLNARP+ +++ES+IVAQAGR G VTVATNMAGRGTDILLGGNPA+MAR+ ++  LA+ +L  +
Sbjct:  243 VHRFLGLSVGLIQTGMTYPERREAYACDVTYVTNVELGFDYLRDNLALTEDETVLRARPLERAFCLVDEADSILIDEARTPLIISKQINAPQPKYGAAKKLVDFLKPGVHYEVDEKAQNVVLTDQGVKDCEKVLGKSLFDLQDPWMSFVTNGLKAKELLTRDKDYIVRGQDIAIVDRFSGRVLEGRKYSDGLQQSIQIKEGLPCSSQSQVIATITYQSLFRLFYKLAGMTGTALTDYKDFVTTYNLPVVAIPTALPNARKDYPDAIFRSKEGKLRALLRETRRAHKTGQPILIGTTSVETSELIADALQELNISCKVLNARPENIEKESQIVAQAGRLGAVTVATNMAGRGTDILLGGNPALMARIKLKLELARGVLGSQ 622          
BLAST of mRNA_P-wetherbeei_contig8707.1.1 vs. uniprot
Match: L1I7Z8_GUITC (Protein translocase subunit SecA n=2 Tax=Guillardia theta TaxID=55529 RepID=L1I7Z8_GUITC)

HSP 1 Score: 409 bits (1052), Expect = 2.200e-131
Identity = 208/377 (55.17%), Postives = 275/377 (72.94%), Query Frame = 1
Query:    7 RFLGLSVGLVQAGSPMDARRAAYACDVTYVTNQELGFDLLRDHLAVAPEQVVQVRPLAFAVVDEADSILIDEARTPLIISRRVAAPTRKYATAAKLAGILQKGTHYTVNEKEQSVVLTDKGFTDVERALG-KSMFDPRDPWAPFVLAAVKAKELYRRDREYIVADSEVQIVDAFSGRVLDGRRFSDGLHQAIEAKEGIAVGMQSQVTAQITYQSLFRGFEKLSGMTGTAITDANEFQKIYGLSVVP-------ARRDYPDVVFRTKAAALRAMLNEVERVHKDGRPVLIGTTSVRASDA-------------VLNARPDLVQRESEIVAQAGRRGVVTVATNMAGRGTDILLGGNPAMMARLYVRDALAQVLLSEED 1074
            RFLGL+VGL+QA    + RRA Y CD+TYVTN ELGFD LRD+LA+ PE +V  RP  F +VDEADSI+IDEARTPLIIS + AAP  KYA +AK+A +L++  HYTV+EK QSV LT++GF+DVE+ L  K +F+P+DPW+P+++ A+KAK L+++D +Y+V  +EV IVD F+GRVL+GRR+S+GLHQ++EAKEG+    ++Q  A ITYQS FR F KLSGMTGTA T+A EF  IYGL V+        ARRD PD  FRT+A   +A++ ++ R H  G+P+LIGTTS+ AS+              VLNA+P++V RE+EIVAQAGR   +T+ATNMAGRGTDILLGGN    A+  +   LA  L+ +++
Sbjct:  219 RFLGLTVGLIQAEMKPEERRANYGCDITYVTNSELGFDYLRDNLAIKPEDIVLTRPFNFCIVDEADSIMIDEARTPLIISEKTAAPAAKYANSAKIATVLEEKVHYTVDEKSQSVTLTERGFSDVEKILNVKDLFNPKDPWSPYIINALKAKSLFKKDVQYVVRANEVMIVDEFTGRVLEGRRWSNGLHQSVEAKEGLKPSSETQTVASITYQSFFRLFPKLSGMTGTARTEAKEFGDIYGLEVLSIPTALPVARRDNPDATFRTQAGKWKAVMGDIARRHTKGQPILIGTTSIAASEQLSKLMTELEVPHEVLNAKPEVVTRENEIVAQAGRAFAITIATNMAGRGTDILLGGNSGFFAKKRIMQKLAPALVDKKN 595          
BLAST of mRNA_P-wetherbeei_contig8707.1.1 vs. uniprot
Match: A0A1X6P7X5_PORUM (Protein translocase subunit SecA n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7X5_PORUM)

HSP 1 Score: 402 bits (1034), Expect = 2.830e-128
Identity = 214/369 (57.99%), Postives = 265/369 (71.82%), Query Frame = 1
Query:   13 LGLSVGLVQAGSPMDARRAAYACDVTYVTNQELGFDLLRDHLAVAPEQVVQVRPLAFAVVDEADSILIDEARTPLIISRRVAAPTRKYATAAKLAGILQKGTHYTVNEKEQSVVLTDKGFTDVERALG-KSMFDPRDPWAPFVLAAVKAKELYRRDREYIVADS-EVQIVDAFSGRVLDGRRFSDGLHQAIEAKEGIAVGMQSQVTAQITYQSLFRGFEKLSGMTGTAITDANEFQKIYGLSVVP-------ARRDYPDVVFRTKAAALRAMLNEVERVHKDGRPVLIGTTSVRASDA-------------VLNARPDLVQRESEIVAQAGRRGVVTVATNMAGRGTDILLGGNPAMMARLYVRDALAQ 1053
            LGLSVGLVQAG     RRAAYACDVTYVTN ELGFD LRD+LA+  E++V  RP  + +VDEADS+LIDEARTPLIIS  VAAP  KYA AAK+A  L  G HYT N KEQSV++TD+G+ D+E+ALG + +F+P DPWAP+++ A+KAKEL++RD  Y+V D  EV I+D F+GR ++GRR+SDGLHQA+EA EGI V  ++   A I+YQ+ FR F +L+GMTGTA T+A E   IY L VVP       AR+DYPD VF+T A   +A++ EV RVH  GRP+L+GTTSV AS+              VLNA+    QRE EI+AQA R+  VT+ATNMAGRGTDI+LGGNP   AR   R AL +
Sbjct:  247 LGLSVGLVQAGDSPAERRAAYACDVTYVTNSELGFDYLRDNLALTAEEIVLERPFYYCLVDEADSVLIDEARTPLIISESVAAPAGKYAAAAKVAAALTIGVHYTANIKEQSVLMTDRGYEDIEKALGIEDLFNPADPWAPYLINALKAKELFKRDTNYLVRDDKEVVIIDEFTGRAMEGRRWSDGLHQAVEAAEGIQVANEATTVASISYQAFFRLFPRLAGMTGTAATEATELGDIYSLRVVPIPTALPIARKDYPDAVFKTPAGKYKAVMREVARVHPLGRPMLLGTTSVEASEQLSELLAEVGVPHEVLNAKAAAAQREGEIIAQAARKYAVTIATNMAGRGTDIVLGGNPEYYARALARRALVR 615          
BLAST of mRNA_P-wetherbeei_contig8707.1.1 vs. uniprot
Match: A0A7S3S5K4_EMIHU (Chloroplast protein-transporting ATPase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S5K4_EMIHU)

HSP 1 Score: 393 bits (1009), Expect = 2.850e-128
Identity = 215/392 (54.85%), Postives = 268/392 (68.37%), Query Frame = 1
Query:    1 VLRFLGLSVGLVQAGSPMDARRAAYACDVTYVTNQELGFDLLRDHLAVAPEQVVQVRPLAFAVVDEADSILIDEARTPLIISRRVAAPTRKYATAAKLAGILQKGTHYTVNEKEQSVVLTDKGFTDVERALGKS-MFDPRDPWAPFVLAAVKAKELYRRDREYIVADSEVQIVDAFSGRVLDGRRFSDGLHQAIEAKEGIAVGMQSQVTAQITYQSLFRGFEKLSGMTGTAITDANEFQKIYGLSVVPA-------RRDYPDVVFRTKAAALRAMLNEVERVHKDGRPVLIGTTSVRASDA-------------VLNARPDLVQRESEIVAQAGRRGVVTVATNMAGRGTDILLGGNPAMMARLYVRDALAQVLLSEEDLGKVPLAAPGFYP 1113
            V  FLGLSVGLVQ+GS   ARR AY+ DVTYVTN ELGFD LRD+LAV  E+VV  R L + VVDE DS+LIDEAR PLIIS +  AP  K+  A+KLA +L++G HY V EKEQ+V LTDKG  D E+AL    +++P +PWA +V  A+KAKEL+ ++R Y+V   E  I+D FSGRV++GRR+ DGLHQA+EAKEG+ V  +++V A +TYQSLFR F KLS M+GTA+++A EF  IYGL VV         R D PD VF+T      A L E+  + + GRP+L+GTTSV AS               VL+A P+  QRE+E+VAQAGR G VT++TNMAGRGTDILLGGNPA MARLY+R A A    +   L  V     GF+P
Sbjct:  224 VYAFLGLSVGLVQSGSDTAARREAYSSDVTYVTNSELGFDYLRDNLAVTAEEVVLRRELNYCVVDEGDSVLIDEARVPLIISGKTDAPVDKFGAASKLAAVLERGIHYDVFEKEQTVSLTDKGTRDCEKALAVGDLYEPTNPWASYVSNALKAKELFVKERSYLVQGGEAVIIDEFSGRVMEGRRWGDGLHQAVEAKEGLTVQPETEVVASVTYQSLFRRFRKLSSMSGTALSEAEEFATIYGLDVVDVPPVLPSLRSDIPDSVFKTTRGKSNAALAELLSLRRSGRPILVGTTSVEASQVFSDKLTELGVKHEVLSAAPEAAQREAEVVAQAGREGSVTISTNMAGRGTDILLGGNPAFMARLYLRTAFA----AAAGLSGVTPPRDGFFP 611          
BLAST of mRNA_P-wetherbeei_contig8707.1.1 vs. uniprot
Match: A0A6T8PR52_HEMAN (Protein translocase subunit SecA n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8PR52_HEMAN)

HSP 1 Score: 397 bits (1021), Expect = 3.110e-128
Identity = 202/377 (53.58%), Postives = 274/377 (72.68%), Query Frame = 1
Query:    7 RFLGLSVGLVQAGSPMDARRAAYACDVTYVTNQELGFDLLRDHLAVAPEQVVQVRPLAFAVVDEADSILIDEARTPLIISRRVAAPTRKYATAAKLAGILQKGTHYTVNEKEQSVVLTDKGFTDVERALG-KSMFDPRDPWAPFVLAAVKAKELYRRDREYIVADSEVQIVDAFSGRVLDGRRFSDGLHQAIEAKEGIAVGMQSQVTAQITYQSLFRGFEKLSGMTGTAITDANEFQKIYGLSVV-------PARRDYPDVVFRTKAAALRAMLNEVERVHKDGRPVLIGTTSVRASDAV-------------LNARPDLVQRESEIVAQAGRRGVVTVATNMAGRGTDILLGGNPAMMARLYVRDALAQVLLSEED 1074
            +FLGL+VGL+QAG   D RR  Y CD+TYVTN ELGFD LRD+LA+ P+++V  RPL   +VDEADSI+IDEARTPLIIS +  AP  KYA +AK+A +L++  HYTV+EK QSVVLT++GF DVE+ L  + +F+P+DPW+P+++ A+KAK L++R+ +Y+   +E+ IVD F+GRVL+GRR+S+GLHQ++EAKEGI+   ++Q  A +TYQS FR F KLSGM+GTA T+A EF+ IY L V+        ARRD  DV FRT+     A++ ++ R H  G+P+LIGTTS++AS+ +             LNA+P+ V RESEIVAQAGR   +T++TNMAGRGTDILLGGN    A+  V   LA  L+S+++
Sbjct:   89 KFLGLTVGLIQAGQKPDERRRNYECDITYVTNSELGFDFLRDNLAMTPDEMVLGRPLNMCIVDEADSIMIDEARTPLIISEKTEAPVAKYANSAKIAAVLEEKVHYTVDEKSQSVVLTERGFGDVEKILNVEDLFNPKDPWSPYIINALKAKSLFKREVQYVKKGNEILIVDEFTGRVLEGRRWSNGLHQSVEAKEGISPSAETQTIASVTYQSFFRQFPKLSGMSGTAATEAAEFKDIYDLGVICIPTALPVARRDNADVTFRTQQGKWEAVMGDIARRHTKGQPILIGTTSIQASEQLHELLDKFEVPHELLNAKPENVDRESEIVAQAGRAFAITISTNMAGRGTDILLGGNAGFFAKKKVMQKLAPALVSKQN 465          
BLAST of mRNA_P-wetherbeei_contig8707.1.1 vs. uniprot
Match: A0A7S0NZS3_9EUKA (Chloroplast protein-transporting ATPase (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NZS3_9EUKA)

HSP 1 Score: 386 bits (992), Expect = 7.860e-127
Identity = 210/372 (56.45%), Postives = 267/372 (71.77%), Query Frame = 1
Query:    1 VLRFLGLSVGLVQAGSPMDARRAAYACDVTYVTNQELGFDLLRDHLAVAPEQVVQVRPLAFAVVDEADSILIDEARTPLIISRRVAAPTRKYATAAKLAGILQKGTHYTVNEKEQSVVLTDKGFTDVERALG-KSMFDPRDPWAPFVLAAVKAKELYRRDREYIVADSEVQIVDAFSGRVLDGRRFSDGLHQAIEAKEGIAVGMQSQVTAQITYQSLFRGFEKLSGMTGTAITDANEFQKIYGLSVV------PARR-DYPDVVFRTKAAALRAMLNEVERVHKDGRPVLIGTTSVRASDA-------------VLNARPDLVQRESEIVAQAGRRGVVTVATNMAGRGTDILLGGNPAMMARLYVRDALAQ 1053
            V RFLGLSVGLVQ G    AR+AAYA DVTYVTN ELGFD LRD+LA++  +VV    LAF VVDE DS+LIDEAR PLIIS    AP  KY+TA KLAG L++  HY V EKEQ+ ++T++G    E+AL  ++++DP  PWA +VL A+KAKEL+ RD+ Y+V D EVQI+D FSGRV++GRR+SDGLHQ++EAKEG+ V  +++V A +TYQSLFR F+KL+ M+GTA+T+A EF  IY L VV      P++R D    V++T      A LNE+  +H+ GRPVL+GTTSV +S A             VL+A P    RE+EI+AQAGR  V+T+ATNMAGRGTDIL+GGNPA MARL +R AL +
Sbjct:  240 VYRFLGLSVGLVQTGQAPAARKAAYAADVTYVTNSELGFDYLRDNLAMSANEVVMREDLAFCVVDEGDSVLIDEARVPLIISGSTDAPVAKYSTACKLAGALERDIHYEVIEKEQTAIVTERGQRYCEQALQVETLYDPVAPWASYVLNAIKAKELFVRDKSYLVRDDEVQIIDEFSGRVMEGRRWSDGLHQSVEAKEGLTVRPETEVVASVTYQSLFRRFDKLASMSGTALTEAREFAAIYSLRVVDVPSALPSQRTDVVSSVYKTTRGKSNAALNELLTLHRAGRPVLVGTTSVESSAAFSAKLGELGFKHQVLSADPASAAREAEIIAQAGRAKVITIATNMAGRGTDILVGGNPAYMARLRLRQALGE 611          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8707.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR85_ECTSI8.220e-16969.79Protein translocase subunit SecA n=1 Tax=Ectocarpu... [more]
A0A835ZJ09_9STRA3.120e-15462.50Protein translocase subunit SecA n=1 Tax=Tribonema... [more]
A0A7S3Y5Q6_HETAK1.260e-14259.85Protein translocase subunit SecA n=1 Tax=Heterosig... [more]
A0A7R9YGE3_9STRA1.200e-13356.22Protein translocase subunit SecA (Fragment) n=1 Ta... [more]
W7TYL7_9STRA6.250e-13358.68Protein translocase subunit SecA n=2 Tax=Monodopsi... [more]
L1I7Z8_GUITC2.200e-13155.17Protein translocase subunit SecA n=2 Tax=Guillardi... [more]
A0A1X6P7X5_PORUM2.830e-12857.99Protein translocase subunit SecA n=1 Tax=Porphyra ... [more]
A0A7S3S5K4_EMIHU2.850e-12854.85Chloroplast protein-transporting ATPase n=1 Tax=Em... [more]
A0A6T8PR52_HEMAN3.110e-12853.58Protein translocase subunit SecA n=1 Tax=Hemiselmi... [more]
A0A7S0NZS3_9EUKA7.860e-12756.45Chloroplast protein-transporting ATPase (Fragment)... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8707contigP-wetherbeei_contig8707:1..2446 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LR85
Preferred namesecA
PFAMsSecA_DEAD,SecA_PP_bind,SecA_SW
Model size1113
Max annot lvl2759|Eukaryota
KEGG koko:K03070
KEGG TC3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categorysignal peptide
Exons5
Evalue1.35e-169
EggNOG OGsCOG0653@1|root,2QS7I@2759|Eukaryota
DescriptionATPase-coupled protein transmembrane transporter activity
Cds size1113
COG categoryU
BRITEko00000,ko00001,ko00002,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187055.2089074-CDS-P-wetherbeei_contig8707:0..3151683187055.2089074-CDS-P-wetherbeei_contig8707:0..315Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8707 1..315 +
1683187055.2192333-CDS-P-wetherbeei_contig8707:577..8441683187055.2192333-CDS-P-wetherbeei_contig8707:577..844Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8707 578..844 +
1683187055.2276006-CDS-P-wetherbeei_contig8707:1140..12991683187055.2276006-CDS-P-wetherbeei_contig8707:1140..1299Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8707 1141..1299 +
1683187055.2410703-CDS-P-wetherbeei_contig8707:1629..17671683187055.2410703-CDS-P-wetherbeei_contig8707:1629..1767Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8707 1630..1767 +
1683187055.2524626-CDS-P-wetherbeei_contig8707:2212..24461683187055.2524626-CDS-P-wetherbeei_contig8707:2212..2446Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8707 2213..2446 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8707.1.1prot_P-wetherbeei_contig8707.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8707 1..2446 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8707.1.1

>prot_P-wetherbeei_contig8707.1.1 ID=prot_P-wetherbeei_contig8707.1.1|Name=mRNA_P-wetherbeei_contig8707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=371bp
VLRFLGLSVGLVQAGSPMDARRAAYACDVTYVTNQELGFDLLRDHLAVAP
EQVVQVRPLAFAVVDEADSILIDEARTPLIISRRVAAPTRKYATAAKLAG
ILQKGTHYTVNEKEQSVVLTDKGFTDVERALGKSMFDPRDPWAPFVLAAV
KAKELYRRDREYIVADSEVQIVDAFSGRVLDGRRFSDGLHQAIEAKEGIA
VGMQSQVTAQITYQSLFRGFEKLSGMTGTAITDANEFQKIYGLSVVPARR
DYPDVVFRTKAAALRAMLNEVERVHKDGRPVLIGTTSVRASDAVLNARPD
LVQRESEIVAQAGRRGVVTVATNMAGRGTDILLGGNPAMMARLYVRDALA
QVLLSEEDLGKVPLAAPGFYP
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mRNA from alignment at P-wetherbeei_contig8707:1..2446+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8707.1.1 ID=mRNA_P-wetherbeei_contig8707.1.1|Name=mRNA_P-wetherbeei_contig8707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2446bp|location=Sequence derived from alignment at P-wetherbeei_contig8707:1..2446+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCTGCGCTTCCTGGGGCTGTCCGTCGGGCTCGTCCAGGCCGGATCGCC GATGGACGCTCGCCGCGCGGCCTACGCGTGCGACGTGACCTACGTGACCA ACCAGGAGCTGGGCTTCGATTTGTTGCGCGACCACCTGGCGGTGGCGCCA GAGCAGGTGGTGCAGGTGCGGCCGCTGGCGTTCGCCGTAGTGGACGAGGC GGATTCCATCTTGATCGACGAGGCGCGGACGCCGCTCATCATCAGCCGGC GGGTGGCGGCACCGACGCGCAAGTACGCCACGGCGGCCAAGCTGGCGGGC ATCCTGCAGAAGGGGGTGAGGTCTTCACAAATGTCTGCACATCCCCCGTT GATCCGAAGCCTCGTCATTCGTCCATGGTGTGGTAGTTGCCCGCTGATCT GAATTTAGAGTCATGGCTGTCTCTGCTGCCCTTGCTCTGAACTGCTTTCC GTGCCGAAATGGTTTTCTGTATTCAGTCCGATCCAGCGATTCTTAGACCA GTCGAAGTCGTACAGTTGTTTCTTGGCGCGCATCTTTATGGTTCGGGCTG CCACCGCTGTCTTCCTTCTTTTTCCAGACCCACTACACAGTGAACGAGAA GGAGCAGTCCGTCGTCCTCACTGACAAGGGCTTCACCGACGTCGAGCGTG CCCTCGGCAAGTCCATGTTTGACCCGCGCGACCCGTGGGCGCCCTTCGTG CTTGCGGCCGTCAAGGCCAAGGAGCTGTACCGGCGGGATCGCGAATACAT TGTGGCGGACAGCGAGGTGCAGATCGTGGACGCCTTCAGCGGGCGCGTGC TCGACGGGCGGCGGTTCTCGGACGGGCTGCACCAGGCCATCGAGGTGGGG CCGAATATTCTGGGAGTCCCATTTCCCTCTCCAACGTGGAATGCTCAAGT ACATTTTCAAACCTATATTTTTTCCATTTTTTCCTCGTCTTTTTGGACCT GCCGCTTGCAGTTTCACTTCTTCTCATGAATACATCTTTACTTTCGACTG TCTTTCCTGCCGTTTCCTCTCGCTGTCGTTTCTTCTGCCGCCTCGGCGCC TCTCCCTACCGTTCCCTCATCTTGCTCACGACTGCCTATATTCTTCTTTT CTCTCGCGGCCGACAAACAATCACTATCGAAATCGCGCAGGCGAAGGAGG GCATCGCGGTGGGGATGCAATCGCAGGTGACGGCGCAGATCACTTACCAG AGCCTCTTCCGCGGTTTCGAAAAGCTCTCGGGCATGACGGGTACGGCCAT CACTGACGCCAACGAGTTCCAAAAGATCTACGGCCTCTCTGTCGTACCGG TGAGCGCTGGTGGCGGCAGCGGTGGGCGCTGGCGGCGGCGGCGGATGCGG TAGTTGTAGCGATGGCGGCGGTGGCCGTGGTGACAAAGGGAGGCAACGTA TTGCGATGCTTTATTGGTTCCGCTGTGCTGGTTATGTGCGCACTCTTCTT GTTTCCTGTACCTCTGTCGGCTGAGCAGCGTTGGACCTTTACGTACCGGT TTTCGGTCCTCCTTCACCTTTTGCCTCGCTTTTCGGCAACGGCCATCAAA CTGATGCCTCCTCGCTCACCTCAGCCTTTTCCACCCTGCGGTCTCTCGAC TACGACAGATCCCGACAGCGCTGCCCAAGGCGCGGCGCGATTACCCGGAC GTGGTGTTCCGCACCAAAGCGGCGGCACTGCGGGCGATGCTCAACGAGGT CGAGCGCGTGCATAAGGACGGCCGCCCGGTCCTCATCGGCACCACCTCAG TGCGGGCATCGGACGCCGTCGAGGCGCAGCTCAGGGAGCGCGGTATCGCC TGCCAGGTGCGGTGCAGAGAGGGATAGCTCTTTTTCTTACAATCGTCTGG TGGTCCCTGTTCTGTCCACAGGGATCAAGGTCCCTGCACCTGAGTGGATA AATAGAAACTCTCCTCGACGGCTGCAGCCGTTTGCGTGCAGCAGAATGAG CCGTCGTTTGCGATGCAGTCGAAGTTGGAGTTGTACCAATAGGAAGTAGA GGGACCATTTCTTTATCCTTCTGGACACCTTGGGTCTTCCCATCCCCTTT GTCTGAAAACTTCGTGCTGGTCCTCTTACTCGTCTTTTTAGCCGGGGTTG AGGTCTTCTTCTGTGCAAGTGTCAAGTGCGTCTTCACCCCTTCCAAGTCG TATGGACTGTTCTTCTTTTTCTCTCGTCGGCTTCTCTCTGCTTATTTCCT GGCCGTCCACAGGTGCTGAACGCGCGGCCGGACCTCGTCCAGCGCGAGTC CGAAATCGTGGCGCAGGCTGGCCGCCGCGGCGTTGTGACGGTCGCTACCA ACATGGCCGGCCGCGGCACGGACATCCTGCTGGGCGGCAACCCGGCCATG ATGGCGCGCCTCTATGTGCGCGACGCGCTGGCGCAGGTCCTGCTGTCGGA GGAAGACTTGGGAAAGGTGCCGCTGGCAGCGCCAGGCTTCTATCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8707:1..2446+

>mRNA_P-wetherbeei_contig8707.1.1 ID=mRNA_P-wetherbeei_contig8707.1.1|Name=mRNA_P-wetherbeei_contig8707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1113bp|location=Sequence derived from alignment at P-wetherbeei_contig8707:1..2446+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCTGCGCTTCCTGGGGCTGTCCGTCGGGCTCGTCCAGGCCGGATCGCC
GATGGACGCTCGCCGCGCGGCCTACGCGTGCGACGTGACCTACGTGACCA
ACCAGGAGCTGGGCTTCGATTTGTTGCGCGACCACCTGGCGGTGGCGCCA
GAGCAGGTGGTGCAGGTGCGGCCGCTGGCGTTCGCCGTAGTGGACGAGGC
GGATTCCATCTTGATCGACGAGGCGCGGACGCCGCTCATCATCAGCCGGC
GGGTGGCGGCACCGACGCGCAAGTACGCCACGGCGGCCAAGCTGGCGGGC
ATCCTGCAGAAGGGGACCCACTACACAGTGAACGAGAAGGAGCAGTCCGT
CGTCCTCACTGACAAGGGCTTCACCGACGTCGAGCGTGCCCTCGGCAAGT
CCATGTTTGACCCGCGCGACCCGTGGGCGCCCTTCGTGCTTGCGGCCGTC
AAGGCCAAGGAGCTGTACCGGCGGGATCGCGAATACATTGTGGCGGACAG
CGAGGTGCAGATCGTGGACGCCTTCAGCGGGCGCGTGCTCGACGGGCGGC
GGTTCTCGGACGGGCTGCACCAGGCCATCGAGGCGAAGGAGGGCATCGCG
GTGGGGATGCAATCGCAGGTGACGGCGCAGATCACTTACCAGAGCCTCTT
CCGCGGTTTCGAAAAGCTCTCGGGCATGACGGGTACGGCCATCACTGACG
CCAACGAGTTCCAAAAGATCTACGGCCTCTCTGTCGTACCGGCGCGGCGC
GATTACCCGGACGTGGTGTTCCGCACCAAAGCGGCGGCACTGCGGGCGAT
GCTCAACGAGGTCGAGCGCGTGCATAAGGACGGCCGCCCGGTCCTCATCG
GCACCACCTCAGTGCGGGCATCGGACGCCGTGCTGAACGCGCGGCCGGAC
CTCGTCCAGCGCGAGTCCGAAATCGTGGCGCAGGCTGGCCGCCGCGGCGT
TGTGACGGTCGCTACCAACATGGCCGGCCGCGGCACGGACATCCTGCTGG
GCGGCAACCCGGCCATGATGGCGCGCCTCTATGTGCGCGACGCGCTGGCG
CAGGTCCTGCTGTCGGAGGAAGACTTGGGAAAGGTGCCGCTGGCAGCGCC
AGGCTTCTATCCG
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