mRNA_P-wetherbeei_contig8699.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8699.1.3
Unique NamemRNA_P-wetherbeei_contig8699.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8699.1.3 vs. uniprot
Match: A0A835Z9Z4_9STRA (Zinc ion binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z4_9STRA)

HSP 1 Score: 358 bits (918), Expect = 1.130e-121
Identity = 177/280 (63.21%), Postives = 201/280 (71.79%), Query Frame = 1
Query:   13 VLGCPHYRRACKLRAVCCGKLFTCRLCHDQVRLVMDHTMDRYNVREMLCMRCGALQPVAPDCQNSACCAYPPPLATAADATAAVAMAKVAAREPYHCGICRLFDDAPDKSIYHCPYCNVCRLGKGLGVDFWHCMRCNACISTGVAD-HKCITHSLESDCPICGVSMFTSTEPVKGLQCGHFLHLDCYREYIFRADHFQHGQAFWYRCPICLKSMEDMTEYFSQLDAVVASQPMPAEYAGWTATVLCHDCEAYTLVPYHFC-YHKCGNAACSSYNTRVEAQ 846
            +LGCPHY+R  KLRA CCG+LFTCRLCHDQV   MDHTMDRY V EMLCM CGALQP++  C ++AC                 + +  A    Y+C IC L DD   K IYHCPYCNVCRLGKGLGVD+ H     AC++   AD H+C+THSLES+CPIC   MF ST+ VKGL+CGHFLHL+CYREY+  A+     QA WYRCPICL+SMEDMTEYF QLDAVVA+QPMP EYAG  A VLCHDCEA+T VPYH   YHKC   ACSSYNTRVE Q
Sbjct:    1 MLGCPHYQRRTKLRAPCCGRLFTCRLCHDQV---MDHTMDRYRVVEMLCMVCGALQPISGACAHAAC----------------PSNSSTATLSRYYCAICHLHDDDASKDIYHCPYCNVCRLGKGLGVDYCHXXXXXACVTVESADTHRCVTHSLESNCPICSTGMFESTQQVKGLRCGHFLHLNCYREYVRHAEE----QAHWYRCPICLRSMEDMTEYFGQLDAVVAAQPMPPEYAGRRAKVLCHDCEAFTTVPYHMSGYHKC--LACSSYNTRVEEQ 255          
BLAST of mRNA_P-wetherbeei_contig8699.1.3 vs. uniprot
Match: A0A6H5L587_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L587_9PHAE)

HSP 1 Score: 359 bits (921), Expect = 1.650e-112
Identity = 175/280 (62.50%), Postives = 196/280 (70.00%), Query Frame = 1
Query:   13 VLGCPHYRRACKLRAVCCGKLFTCRLCHDQVRLVMDHTMDRYNVREMLCMRCGALQPVAPDCQNSACCAYPPPLATAADATAAVAMAKVAAREPYHCGICRLFDDAPDKSIYHCPYCNVCRLGKGLGVDFWHCMRCNACISTGVADHKCITHSLESDCPICGVSMFTSTEPVKGLQCGHFLHLDCYREYIFRADHFQHGQAFWYRCPICLKSMEDMTEYFSQLDAVVASQPMPAEYAGWTATVLCHDCEAYTLVPYHFCYHKCGNAACSSYNTRVEAQQP 852
            VLGCPHYRRACK+RA CC KLFTCRLCHDQV    DH +DR  V EMLCMRC  LQP+  +C+N +C         AA+        K+A    Y+CGIC LFDDAP+K IYHCPYCNVCRLGKGLGVD+        C+S     H C++ SLESDCPIC  S+FTST  VKGL+CGHF+HL CY+EYI RA+     + FWYRCPIC KSMEDM EYFSQ+DAVVASQPMP  YAGW    LCHDCE YT VPYHF Y KCG  AC SYNTR E   P
Sbjct:  838 VLGCPHYRRACKIRAPCCQKLFTCRLCHDQVS---DHKVDREEVTEMLCMRCETLQPINSECRNHSC------RPAAAEGKPPCTGRKMAR---YYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXXCVSMNAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYKEYIGRAE----SREFWYRCPICRKSMEDMREYFSQMDAVVASQPMPEAYAGWKTKALCHDCERYTEVPYHFYYLKCG--ACGSYNTRAEENMP 1099          
BLAST of mRNA_P-wetherbeei_contig8699.1.3 vs. uniprot
Match: A0A7S4DJ29_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJ29_HETAK)

HSP 1 Score: 297 bits (761), Expect = 6.890e-98
Identity = 143/274 (52.19%), Postives = 174/274 (63.50%), Query Frame = 1
Query:   28 HYRRACKLRAVCCGKLFTCRLCHDQVRLVMDHTMDRYNVREMLCMRCGALQPVAPDCQNSACCAYPPPLATAADATAAVAMAKVAAREPYHCGICRLFDDAPDKSIYHCPYCNVCRLGKGLGVDFWHCMRCNACISTGVADHKCITHSLESDCPICGVSMFTSTEPVKGLQCGHFLHLDCYREYIFRADHFQHGQAFWYRCPICLKSMEDMTEYFSQLDAVVASQPMPAEYAGWTATVLCHDCEAYTL-VPYHFCYHKCGNAACSSYNTRVEAQ 846
            HYRR   ++A CCG  + CRLCHDQ +    H MDRY +  M CM C   QPV   C+N AC     PL+                   Y+C IC+LFDDAP K+IYHCPYCN+CRLG+GLG DF HCM+CN C++     H+C+  +LE DCPIC   +F ST   KGL+CGH LHLDCY+ Y+ +       Q FW+RCP+C KSM+DMTEYFSQLDAVVA+QPMP E  G    VLC DCEA    VP+HF YHKC    C SYNT++E +
Sbjct:    1 HYRRRAMVQAPCCGLFYPCRLCHDQEQ---GHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYSKEPLSR------------------YYCAICKLFDDAPGKAIYHCPYCNLCRLGRGLGRDFRHCMKCNCCVALSAEPHRCLPKALEGDCPICSEPLFVSTREYKGLRCGHLLHLDCYQAYVAQGGE----QLFWFRCPVCRKSMDDMTEYFSQLDAVVAAQPMPPELRGRRVRVLCLDCEAGGQEVPHHFLYHKCPR--CGSYNTQLEGE 247          
BLAST of mRNA_P-wetherbeei_contig8699.1.3 vs. uniprot
Match: I2CRN7_NANGC (Zinc ion binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRN7_NANGC)

HSP 1 Score: 285 bits (728), Expect = 3.950e-93
Identity = 143/273 (52.38%), Postives = 167/273 (61.17%), Query Frame = 1
Query:   28 HYRRACKLRAVCCGKLFTCRLCHDQVRLVMDHTMDRYNVREMLCMRCGALQPVAPDCQNSACCAYPPPLATAADATAAVAMAKVAAREPYHCGICRLFDDAPDKSIYHCPYCNVCRLGKGLGVDFWHCMRCNACISTGVAD--HKCITHSLESDCPICGVSMFTSTEPVKGLQCGHFLHLDCYREYIFRADHFQHGQAFWYRCPICLKSMEDMTEYFSQLDAVVASQPMPAEYAGWTATVLCHDC-EAYTLVPYHFCYHKCGNAACSSYNTRV 837
            HYRRACKLRA CCG+L+ CRLCHDQ   + DH MDRY V E+ CMRCG LQP A  C+N  C                           Y+C ICRL+DD   K+IYHCPYCNVCRLGKGLG+DF HCM CNAC+S  V    HKCI  +L+ DCP+C   +FTST   K L CGH +H  CY  Y   A          Y CPIC KSMEDM+ +F+ LD ++ + PMP E+A W + VLC DC E    +PYHF YHKC N  C SYNTRV
Sbjct:    2 HYRRACKLRAPCCGRLYPCRLCHDQA--LTDHAMDRYAVAEICCMRCGELQPPARTCRNPHCRHV---------------------FSAYYCDICRLYDDDVGKAIYHCPYCNVCRLGKGLGIDFRHCMTCNACVSLAVPPERHKCIEQALQRDCPVCSEPLFTSTTHYKVLSCGHSMHRQCYDAYRQTA----------YTCPICKKSMEDMSSHFAGLDLLLQAYPMPPEFATWRSDVLCQDCGEESRNIPYHFLYHKCANG-CGSYNTRV 240          
BLAST of mRNA_P-wetherbeei_contig8699.1.3 vs. uniprot
Match: A0A7S1XWB5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWB5_9STRA)

HSP 1 Score: 295 bits (755), Expect = 7.340e-91
Identity = 142/276 (51.45%), Postives = 177/276 (64.13%), Query Frame = 1
Query:   16 LGCPHYRRACKLRAVCCGKLFTCRLCHDQVRLVMDHTMDRYNVREMLCMRCGALQPVAPDCQNSACCAYPP--PLATAADATAAVAMAKVAAREPYHCGICRLFDDAPDKSIYHCPYCNVCRLGKGLGVDFWHCMRCNACISTGVADHKCITHSLESDCPICGVSMFTSTEPVKGLQCGHFLHLDCYREYIFRADHFQHGQAFWYRCPICLKSMEDMTEYFSQLDAVVASQPMPAEYAGWTATVLCHDCEAYTLVPYHFCYHKCGNAACSSYNTRV 837
            LGCPHY+R  KLRA CC KL TCRLCHDQ     DH M+R+ V EMLCM CG LQPV   C N  C    P  PL+T                  Y+C +C LFDD PDK IYHCPYCNVCR G+GLG+D+ HCMRCNAC+    A+HKC+   L+  CPIC   +F ST P+K L+CGH +H DCY+ Y  +A          Y CPIC KS++DM+EYF+QLD+ ++  PMP E+  + + +LCHDC+  + VP+HF YHKC N  C S+NTR+
Sbjct:  531 LGCPHYKRKVKLRAPCCDKLVTCRLCHDQA---CDHMMNRFAVEEMLCMVCGTLQPVKGICANEKCKHSSPEEPLST------------------YYCDVCHLFDDDPDKHIYHCPYCNVCRAGRGLGIDYRHCMRCNACVRLN-AEHKCLDQVLQGACPICLEEVFRSTRPIKALKCGHVMHKDCYQSYRQQA----------YTCPICWKSVDDMSEYFTQLDSYISHLPMPTEFLNFRSHILCHDCDTKSWVPFHFAYHKCTN--CVSFNTRL 772          
BLAST of mRNA_P-wetherbeei_contig8699.1.3 vs. uniprot
Match: A0A7S1GIX4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIX4_CYCTE)

HSP 1 Score: 279 bits (713), Expect = 8.280e-90
Identity = 142/280 (50.71%), Postives = 171/280 (61.07%), Query Frame = 1
Query:    7 GPVLGCPHYRRACKLRAVCCGKLFTCRLCHDQVR----LVMDHTMDRYNVREMLCMRCGALQPVAPDCQNSACCAYPPPLATAADATAAVAMAKVAAREPYHCGICRLFDDAPDKSIYHCPYCNVCRLGKGLGVDFWHCMRCNACISTGVADHKCITHSLESDCPICGVSMFTSTEPVKGLQCGHFLHLDCYREYIFRADHFQHGQAFWYRCPICLKSMEDMTEYFSQLDAVVASQPMPAEYAGWTATVLCHDCEAYTLVPYHFCYHKCGNAACSSYNTR 834
            G VLGCPHY R+CKLR    G+L+TCRLC  Q R       D  +DRY V+E+LCMRC  LQP    C N AC                   +K A    Y+C IC L+DD P+K IYHCP+CNVCR G+GLG+D+ HCMRCNAC+S    DH CI   L++ CPIC  SMF STEP+KGL+CGH LHL C+  Y+        GQ+  Y CP+C KS+EDM EYF+ LDA V  QPMPA +    + + C DC   + VPYHF   KC  A C SYNTR
Sbjct:   69 GGVLGCPHYSRSCKLRHPTSGRLYTCRLCCAQERENPLKEQDSPLDRYAVKEILCMRCTTLQPANEKCINQAC------------------DSKGARFAKYYCQICHLYDDDPEKQIYHCPFCNVCRSGRGLGIDYRHCMRCNACVSLEDTDHHCIPQRLQATCPICHESMFQSTEPLKGLKCGHVLHLSCFTRYM-------RGQS--YTCPLCKKSVEDMREYFTMLDAAVRMQPMPAAFLSTVSEIYCQDCGQSSKVPYHFVGCKC--AHCGSYNTR 319          
BLAST of mRNA_P-wetherbeei_contig8699.1.3 vs. uniprot
Match: W7TVL5_9STRA (Zinc finger protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVL5_9STRA)

HSP 1 Score: 289 bits (740), Expect = 2.860e-88
Identity = 145/276 (52.54%), Postives = 169/276 (61.23%), Query Frame = 1
Query:   19 GCPHYRRACKLRAVCCGKLFTCRLCHDQVRLVMDHTMDRYNVREMLCMRCGALQPVAPDCQNSACCAYPPPLATAADATAAVAMAKVAAREPYHCGICRLFDDAPDKSIYHCPYCNVCRLGKGLGVDFWHCMRCNACISTGVAD--HKCITHSLESDCPICGVSMFTSTEPVKGLQCGHFLHLDCYREYIFRADHFQHGQAFWYRCPICLKSMEDMTEYFSQLDAVVASQPMPAEYAGWTATVLCHDC-EAYTLVPYHFCYHKCGNAACSSYNTRV 837
            GC HYRRACKLRA CCG+L+ CRLCHDQ   + DH MDRY V E+ CMRCG LQP A  C+N  C                           Y+C ICRL+DD   K+IYHCPYCNVCRLGKGLG+DF HCM CNAC+S  V    HKCI  +L+ DCP+C   +FTST   K L CGH +H  CY  Y   A          Y CPIC KSMEDM+ +F+ LD ++ + PMP E+A W + VLC DC E    +PYHF YHKC N  C SYNTRV
Sbjct:  575 GCMHYRRACKLRAPCCGRLYPCRLCHDQA--LTDHAMDRYAVAEICCMRCGELQPPARTCRNPHCRHV---------------------FSAYYCDICRLYDDDVGKAIYHCPYCNVCRLGKGLGIDFRHCMTCNACVSLAVPPERHKCIEQALQRDCPVCSEPLFTSTTHYKVLSCGHSMHRQCYDAYRQTA----------YTCPICKKSMEDMSSHFAGLDLLLQAYPMPPEFATWRSDVLCQDCGEESRNIPYHFLYHKCANG-CGSYNTRV 816          
BLAST of mRNA_P-wetherbeei_contig8699.1.3 vs. uniprot
Match: A0A6U3SMK8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SMK8_9STRA)

HSP 1 Score: 276 bits (707), Expect = 6.490e-88
Identity = 138/280 (49.29%), Postives = 172/280 (61.43%), Query Frame = 1
Query:    7 GPVLGCPHYRRACKLRAVCCGKLFTCRLCHDQVRLV----MDHTMDRYNVREMLCMRCGALQPVAPDCQNSACCAYPPPLATAADATAAVAMAKVAAREPYHCGICRLFDDAPDKSIYHCPYCNVCRLGKGLGVDFWHCMRCNACISTGVADHKCITHSLESDCPICGVSMFTSTEPVKGLQCGHFLHLDCYREYIFRADHFQHGQAFWYRCPICLKSMEDMTEYFSQLDAVVASQPMPAEYAGWTATVLCHDCEAYTLVPYHFCYHKCGNAACSSYNTR 834
            G VLGCPHY RACKLR    G+L+TCRLC +Q R +     D  +DRY V E+ CMRCGALQP +  C +  C +   P +                   Y C IC L+DD P+K+IYHCP+CNVCR GKGLGVD+ HCMRCNAC+S     H CI  SL+ +CPIC  SMF STEP++GL+CGH +HL C+  Y+         +A  Y CP+C KS+EDM +YF+ LDA +  QPMPA Y+   + + C DC     VPYHF   KC  + C SYNTR
Sbjct:  150 GAVLGCPHYARACKLRHPSSGRLYTCRLCCEQEREMPMKDQDSPLDRYAVTEVFCMRCGALQPASDRCISPKCESQGKPFSK------------------YSCNICNLYDDGPNKNIYHCPFCNVCRSGKGLGVDYRHCMRCNACVSLADDTHHCIPQSLQGNCPICHESMFQSTEPLRGLKCGHVMHLSCFTMYM---------RAQSYTCPLCKKSIEDMKDYFALLDAAIRMQPMPAAYSATVSDIYCQDCGKRGKVPYHFVGCKC--SYCGSYNTR 400          
BLAST of mRNA_P-wetherbeei_contig8699.1.3 vs. uniprot
Match: A0A6M2F2G6_9ROSI (Uncharacterized protein n=1 Tax=Populus davidiana TaxID=266767 RepID=A0A6M2F2G6_9ROSI)

HSP 1 Score: 273 bits (698), Expect = 1.120e-87
Identity = 132/275 (48.00%), Postives = 173/275 (62.91%), Query Frame = 1
Query:   13 VLGCPHYRRACKLRAVCCGKLFTCRLCHDQVRLVMDHTMDRYNVREMLCMRCGALQPVAPDCQNSACCAYPPPLATAADATAAVAMAKVAAREPYHCGICRLFDDAPDKSIYHCPYCNVCRLGKGLGVDFWHCMRCNACISTGVADHKCITHSLESDCPICGVSMFTSTEPVKGLQCGHFLHLDCYREYIFRADHFQHGQAFWYRCPICLKSMEDMTEYFSQLDAVVASQPMPAEYAGWTATVLCHDCEAYTLVPYHFCYHKCGNAACSSYNTRV 837
            V GC HY+R CKLRA CCGKLF CR CHD+V    DH+MDR    EM+CMRC  +QPV P C + +C  +              +MAK      Y+C +C+ FDD  ++++YHCP+CN+CR+G GLGVDF+HCM+CN C++  +ADHKC    LE++CPIC   MFTS+  VK L CGHF+H  C++ Y     H        Y CPIC KS+ DM+ YF  LDA++AS+ +P EY      +LC+DC+     P+H+ YHKC    C SYNTRV
Sbjct:   71 VFGCEHYKRNCKLRATCCGKLFACRFCHDKVS---DHSMDRKATSEMMCMRCLRIQPVGPVCTSVSCGGF--------------SMAK------YYCSVCKFFDD--ERAVYHCPFCNLCRVGTGLGVDFFHCMKCNCCLAMKLADHKCREKGLETNCPICCDDMFTSSASVKALPCGHFMHSTCFQAYT--CSH--------YICPICSKSLGDMSVYFGMLDALLASEELPEEYRDRCQDILCNDCDKKGTAPFHWLYHKC--RFCGSYNTRV 308          
BLAST of mRNA_P-wetherbeei_contig8699.1.3 vs. uniprot
Match: A0A7S2RAG1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAG1_9STRA)

HSP 1 Score: 270 bits (691), Expect = 7.690e-86
Identity = 139/292 (47.60%), Postives = 179/292 (61.30%), Query Frame = 1
Query:   16 LGCPHYRRACKLRAVCCGKLFTCRLCHDQ-VRLVMDHTMDRYNVREMLCMRCGALQPVAPDCQ----NSACCAYP-----------PPLATAADATAAVAMAKVAAREPYHCGICRLFDDAPDKSIYHCPYCNVCRLGKGLGVDFWHCMRCNACIST--GVADHKCITHSLESDCPICGVSMFTSTEPVKGLQCGHFLHLDCYREYIFRADHFQHGQAFWYRCPICLKSMEDMTEYFSQLDAVVASQPMPAEYAGWTATVLCHDCEAYTLVPYHFCYHKCGNAACSSYNTRV 837
            LGCPHY R CK+RA CC K++ CRLCHD  V       +D Y+V EMLCM C  LQPV   CQ    +    A P           P   TA D T AV + K      Y+C +C+L+D++ D+ IYHCPYCNVCR+GKGLGVD+ HCMRCN C+    GV  H+CI+  LE +CPIC  ++  ST  +KGL CGH +HL+CYR+Y          +A+ Y CPICLK+M+DM +YFS+LD   A  P+P  +    + + C+DC   ++V YH  YHKC  +AC SYNTRV
Sbjct:   84 LGCPHYARGCKIRAPCCRKMYVCRLCHDSDVDRTCSAKLDTYSVTEMLCMHCQTLQPVGKHCQVCYSDLGLAAQPQSQHTTQDTVRPNRHTANDRTHAV-LGK------YYCNVCKLWDNSLDREIYHCPYCNVCRVGKGLGVDYRHCMRCNCCVEMREGVT-HRCISQVLEGNCPICADTLRFSTADLKGLPCGHTMHLECYRQY----------RAYSYTCPICLKTMDDMRDYFSRLDQAAAHSPVPNMFRNTRSRIYCNDCGDTSVVQYHMLYHKCPKSACGSYNTRV 357          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8699.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z9Z4_9STRA1.130e-12163.21Zinc ion binding protein n=1 Tax=Tribonema minus T... [more]
A0A6H5L587_9PHAE1.650e-11262.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4DJ29_HETAK6.890e-9852.19Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
I2CRN7_NANGC3.950e-9352.38Zinc ion binding protein n=1 Tax=Nannochloropsis g... [more]
A0A7S1XWB5_9STRA7.340e-9151.45Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1GIX4_CYCTE8.280e-9050.71Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
W7TVL5_9STRA2.860e-8852.54Zinc finger protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A6U3SMK8_9STRA6.490e-8849.29Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6M2F2G6_9ROSI1.120e-8748.00Uncharacterized protein n=1 Tax=Populus davidiana ... [more]
A0A7S2RAG1_9STRA7.690e-8647.60Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8699contigP-wetherbeei_contig8699:130..2217 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FUX1
PFAMsHemerythrin,zf-CHY,zf-RING_2,zinc_ribbon_6
Model size852
Max annot lvl2759|Eukaryota
KEGG koko:K16276
Hectar predicted targeting categoryother localisation
Exons5
Evalue8.91e-113
EggNOG OGsKOG1940@1|root,KOG1940@2759|Eukaryota
Descriptionzinc ion binding
Cds size852
COG categoryS
BRITEko00000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187054.8821614-CDS-P-wetherbeei_contig8699:129..2401683187054.8821614-CDS-P-wetherbeei_contig8699:129..240Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8699 130..240 +
1683187054.8948987-CDS-P-wetherbeei_contig8699:539..7211683187054.8948987-CDS-P-wetherbeei_contig8699:539..721Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8699 540..721 +
1683187054.9056041-CDS-P-wetherbeei_contig8699:1102..12051683187054.9056041-CDS-P-wetherbeei_contig8699:1102..1205Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8699 1103..1205 +
1683187054.9160838-CDS-P-wetherbeei_contig8699:1445..17271683187054.9160838-CDS-P-wetherbeei_contig8699:1445..1727Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8699 1446..1727 +
1683187054.9258373-CDS-P-wetherbeei_contig8699:2043..22171683187054.9258373-CDS-P-wetherbeei_contig8699:2043..2217Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8699 2044..2217 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8699.1.3prot_P-wetherbeei_contig8699.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8699 130..2217 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8699.1.3

>prot_P-wetherbeei_contig8699.1.3 ID=prot_P-wetherbeei_contig8699.1.3|Name=mRNA_P-wetherbeei_contig8699.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp
MVGPVLGCPHYRRACKLRAVCCGKLFTCRLCHDQVRLVMDHTMDRYNVRE
MLCMRCGALQPVAPDCQNSACCAYPPPLATAADATAAVAMAKVAAREPYH
CGICRLFDDAPDKSIYHCPYCNVCRLGKGLGVDFWHCMRCNACISTGVAD
HKCITHSLESDCPICGVSMFTSTEPVKGLQCGHFLHLDCYREYIFRADHF
QHGQAFWYRCPICLKSMEDMTEYFSQLDAVVASQPMPAEYAGWTATVLCH
DCEAYTLVPYHFCYHKCGNAACSSYNTRVEAQQP
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mRNA from alignment at P-wetherbeei_contig8699:130..2217+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8699.1.3 ID=mRNA_P-wetherbeei_contig8699.1.3|Name=mRNA_P-wetherbeei_contig8699.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2088bp|location=Sequence derived from alignment at P-wetherbeei_contig8699:130..2217+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGGGCCGGTCCTGGGCTGTCCACATTACCGGCGGGCGTGCAAGCT GCGTGCTGTCTGCTGCGGGAAGCTCTTCACTTGCCGCCTGTGCCATGATC AGGTGAGGCTCGTTTCTGAGGCCTGGTGGTACGCATAACCTGTTGCTCGA CAGTCGTTTTTTGTATTTCCCCGGCACCCGAAACTGCCTTCTACCCGCAC GCCCACCGTCGTGGCTGCCCCGGTTGGTTTACACCCCCCACCGGCTTTTA TGTGGCCACACGCCCCACGCTGAGGTGGGAGCATCGAGCAGCGCAAACGA CCTTTCTTTCGGCCGTTCTTCTTCTTTCTCTTCTGTTCTAACCTTTCGTC CGTTTCCCCGCGGGCTTCGTCACTTATCGCCGTTGCGCGGCACATCGTAC TGCACGACAGGTGATGGACCACACGATGGACCGATATAACGTGCGCGAGA TGCTGTGTATGCGCTGCGGAGCGCTGCAGCCCGTCGCTCCCGACTGTCAG AATTCAGCATGCTGCGCCTATCCGCCGCCGCTGGCCACTGCGGCAGACGC GACGGCGGCAGTGGCGATGGCGAAGGTCGCGGCAAGGGAGCCGTCAGGGG CAGTGGTAGCCGCTGCTGGCGTTTCGCCGTCGGCGGCAGCTAGGACGTTA GGTGCTGCCGCCGCTGCTGGGGAATCGGTACGGGGGGAGGGGCAGGAGGC GGCTCTGGGGTCGAGGCGACTTGCCAGGTCAGTTGGGTGCTTCTTGTGCT TTGGGGTGATGTGCAGTGTCACTGCGGGAATGATCACTACTCAAGTTCTC TTGATGATTTCATTGCGCGGCAACTTCGGCTCCCTATCTTCTACATATTT AGAACGTTTCGGGCCCGATCTGGAAAGAACCCTGCTGCCCTTCGAACAGA CCATTTTGGACGCCTTGCGCCTACCTTTCCATCCTCCTCTTCTCGTGATG ATGGCATTGCGCCCACGCGGCAGGTACCACTGCGGCATCTGCAGGCTGTT CGATGATGCGCCGGACAAGAGCATCTACCACTGCCCCTACTGCAACGTCT GCCGCCTCGGCAAGGGACTCGGAGTGGTGAGTGACTCACCGGTCGCTGCT GGACCCTTCCTTTCGAGTTCTGGCGCCATCCAACCCCCGGTGTTCATGTT GCATCACAGTATGCTTGCCGGGCTTCCTTTGCGCCGCTGCCATGTTTATT TTTTTCAGCTCACTGTGCAGCTTTCTGCTCTCCTATCTCAATTTCACCGC GTTCCCGTATACTTTCTTCTGCCCGCGTACAAACTAAAACGAAACACCAA AACACCGCGTTCGCAGGACTTTTGGCACTGCATGCGGTGCAACGCGTGCA TCAGCACGGGCGTGGCGGACCACAAGTGCATCACGCACTCGCTCGAGTCG GACTGCCCCATCTGCGGCGTCTCCATGTTCACCTCCACTGAACCGGTCAA GGGCCTGCAGTGCGGCCACTTTCTGCACCTCGACTGCTATCGGGAGTATA TCTTCCGGGCGGACCACTTCCAGCACGGGCAGGCCTTTTGGTACCGTTGC CCCATCTGTCTCAAAAGCATGGAGGACATGACCGAGTACTTCTCGCAGGT GCGCTCCAGCTCGTTTCCGAATTGAAGCCGTATATGGTTCTTGCTCCTTC CTGAGAAATGTGTAGTCTCTTCCATGACCAAAAAAAGGAAAGCTGGAATT CCGTCTTCTGGAATCAAGAGGGGGGCTGGTGCCGGCCGGCTCTCTTTGTC TCTCCTCTCTTCCCGAAAGGACTGGTCTACACTCTGCCCTTGTTCATTTG TGCAATTCTCTGTCTTCGGTTCCCCATTCCTCATCTCTCCATGCCCGCCC GCCCGCTGTCGTGTCGCGTCGCACTTCGCTCCGCTGGCATTGGCGGTGTT CCCGCCCAGCGCAGCTGGACGCGGTGGTGGCGAGCCAACCAATGCCGGCT GAGTACGCGGGCTGGACGGCGACGGTGCTCTGCCACGACTGCGAGGCCTA CACACTGGTGCCGTACCATTTCTGCTACCACAAGTGCGGCAACGCCGCCT GCAGCTCCTACAACACGCGCGTCGAGGCGCAGCAGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8699:130..2217+

>mRNA_P-wetherbeei_contig8699.1.3 ID=mRNA_P-wetherbeei_contig8699.1.3|Name=mRNA_P-wetherbeei_contig8699.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig8699:130..2217+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGGGCCGGTCCTGGGCTGTCCACATTACCGGCGGGCGTGCAAGCT
GCGTGCTGTCTGCTGCGGGAAGCTCTTCACTTGCCGCCTGTGCCATGATC
AGGTGAGGCTCGTGATGGACCACACGATGGACCGATATAACGTGCGCGAG
ATGCTGTGTATGCGCTGCGGAGCGCTGCAGCCCGTCGCTCCCGACTGTCA
GAATTCAGCATGCTGCGCCTATCCGCCGCCGCTGGCCACTGCGGCAGACG
CGACGGCGGCAGTGGCGATGGCGAAGGTCGCGGCAAGGGAGCCGTACCAC
TGCGGCATCTGCAGGCTGTTCGATGATGCGCCGGACAAGAGCATCTACCA
CTGCCCCTACTGCAACGTCTGCCGCCTCGGCAAGGGACTCGGAGTGGACT
TTTGGCACTGCATGCGGTGCAACGCGTGCATCAGCACGGGCGTGGCGGAC
CACAAGTGCATCACGCACTCGCTCGAGTCGGACTGCCCCATCTGCGGCGT
CTCCATGTTCACCTCCACTGAACCGGTCAAGGGCCTGCAGTGCGGCCACT
TTCTGCACCTCGACTGCTATCGGGAGTATATCTTCCGGGCGGACCACTTC
CAGCACGGGCAGGCCTTTTGGTACCGTTGCCCCATCTGTCTCAAAAGCAT
GGAGGACATGACCGAGTACTTCTCGCAGCTGGACGCGGTGGTGGCGAGCC
AACCAATGCCGGCTGAGTACGCGGGCTGGACGGCGACGGTGCTCTGCCAC
GACTGCGAGGCCTACACACTGGTGCCGTACCATTTCTGCTACCACAAGTG
CGGCAACGCCGCCTGCAGCTCCTACAACACGCGCGTCGAGGCGCAGCAGC
CG
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