mRNA_P-wetherbeei_contig8697.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8697.2.1 vs. uniprot
Match: A0A836C9N9_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9N9_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.450e-19 Identity = 137/439 (31.21%), Postives = 177/439 (40.32%), Query Frame = 1
Query: 196 GLRAFALCYSVELFAAWVPQPSPCCAAASVAGACNALLGRTRSDTSALNHTHVLRALATNLEATVSKKRARFERLLGAEIQPLLERLDAELAATGQSLLAARRSAAPTVPQLLRMVDSIAKREIG----GTEA-------VFDRLRELM-----------------------------VEDASARTAAAARRKHSVGEAEIGIGGSAAAEAAVQSLPPPVAEEPSDLGDDAAAVATAGTSMPFSAPGDTGTAAVXXXXXXXXXXXXXXXXXXXXXFSDRTRGRSCEKDDGSESRGDDATNAGDDDGKNTVGVVWASSGAVHVTAPSRTRWLWRKDLGELLKRIGGVAQLTAEKPSTAPIGNCGLLEAVRRLSETGAFDAATMKAGATMAPPAATEALSAAGAGTTPVPVAISGRLFMGRGRSTSAAAGVDVVLSRNDDK 1392
G + A+CY+ L WV QPSPCCAAASVAGA NAL G R AL H VL L L + RARFERLLG+ + PLL+ L +AA G++L A A P L ++ + +A+R G G EA F RL EL+ AR RR +A+ + E +D + A +T TA XXXXXXXXXXXX R + R + SR+ W W+ DL ELLK +GG+ +LT+++PSTA GN G++ AV RLS G DA + G T +A +S RLFMGR + G+DV LSR DD+
Sbjct: 150 GHQRVAVCYNEALLRGWVAQPSPCCAAASVAGAFNALRGAARGTPRALTHFAVLSVLEETLCERIDNLRARFERLLGSSVAPLLDALRERVAADGRALGGAGARAVPRKYLLRQVRELVAERIAGDACEGGEAGSDQQPDAFRRLAELLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARAQCEGRRSSQQDDADA-------------------SGEEADAAEQGAC--------------ETQTAXXXXXXXXXXXXXXLLPLPPETAREARQQQR-------------------------------------RRSLSSRSPWRWKTDLYELLKAMGGLEKLTSKRPSTAAFGNAGVIRAVNRLSANGISDA--VHYGPTHGSSXXXXXXAAR----------VSARLFMGRAHRSGG--GIDVPLSRGDDE 504
BLAST of mRNA_P-wetherbeei_contig8697.2.1 vs. uniprot
Match: A0A6H5KIX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX0_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 5.200e-17 Identity = 66/136 (48.53%), Postives = 80/136 (58.82%), Query Frame = 1
Query: 208 FALCYSVELFAAWVPQPSPCCAAASVAGACNALLGRTRSDTSALNHTHVLRALATNLEATVSKKRARFERLLGAEIQPLLERLDAELAATGQSLLA-ARRSAAPTVPQLLRMVDSIAKREIG--GTEAVFDRLREL 606
F++ YS L WV Q SPCCAAASVAGA NAL G R ALN VLRA+ T ++ V+ ARFERLLG ++PLL+ LDAELA G+ L R+A P LLR+ + RE G + FD L EL
Sbjct: 139 FSVSYSRALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSHGALNSESVLRAMRTVVQGQVAAMIARFERLLGGSLEPLLQVLDAELALEGKHLGGKGPRAAVANGPHLLRLTRIVTSRERERVGHSSTFDLLWEL 274
BLAST of mRNA_P-wetherbeei_contig8697.2.1 vs. uniprot
Match: D8LB40_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB40_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 1.550e-16 Identity = 65/136 (47.79%), Postives = 79/136 (58.09%), Query Frame = 1
Query: 208 FALCYSVELFAAWVPQPSPCCAAASVAGACNALLGRTRSDTSALNHTHVLRALATNLEATVSKKRARFERLLGAEIQPLLERLDAELAATGQSLLA-ARRSAAPTVPQLLRMVDSIAKREIG--GTEAVFDRLREL 606
F++ YS L WV Q SPCCAAASVAGA NAL G R ALN VLRA+ ++ V+ ARFERLLG ++PLL+ LDAELA G+ L R+A P LLR+ + RE G + FD L EL
Sbjct: 116 FSVSYSRALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSHGALNSESVLRAMRAVVQGQVTSMIARFERLLGGSLEPLLQVLDAELALEGKHLGGRGPRAAVANGPHLLRLTRIVTSRERERVGHSSTFDLLWEL 251
BLAST of mRNA_P-wetherbeei_contig8697.2.1 vs. uniprot
Match: A0A7S3YFP1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFP1_HETAK) HSP 1 Score: 83.6 bits (205), Expect = 8.330e-16 Identity = 49/92 (53.26%), Postives = 58/92 (63.04%), Query Frame = 1
Query: 208 FALCYSVELFAAWVPQPSPCCAAASVAGACNALLGRTRSDTSALNHTHVLRALATNLEATVSKKRARFERLLGAE-IQPLLERLDAELAATG 480
F++ YS L WV QPSPCCAAASVAGA NA+ G R +AL HTHVL + LE + +K+ RFERLLG + PLLE L L A G
Sbjct: 6 FSVSYSQRLLNGWVKQPSPCCAAASVAGAWNAVRGLPRRHPAALRHTHVLAHMTEMLEGQLREKQGRFERLLGCRTLDPLLEALTLRLEADG 97
BLAST of mRNA_P-wetherbeei_contig8697.2.1 vs. uniprot
Match: A0A7S2W675_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W675_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.380e-11 Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 1
Query: 208 FALCYSVELFAAWVPQPSPCCAAASVAGACNALLGRTRSDTSALNHTHVLRALATNLEATVSKKRARFERLLGAEIQPLLERLDAELAATGQSL 489
F++ YS WV QPSPCCAAAS+AGA NA++ RS AL+H + A K+AR ERLLGA ++PL ++ A LAA G+ L
Sbjct: 30 FSVSYSRGALEGWVKQPSPCCAAASMAGAWNAVMRLHRSAPDALSHLEAVPIFADIQRELTMAKQARLERLLGAPLEPLKTQVIAALAAEGKRL 123
BLAST of mRNA_P-wetherbeei_contig8697.2.1 vs. uniprot
Match: A0A8J2SEE4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEE4_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.480e-10 Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 1
Query: 139 LLAPLLSKGEGDFFPPHRAGLRAFALCYSVELFAAWVPQPSPCCAAASVAGACNALLGRTRSDTSALNHTHVLRALATNLEATVSKKRARFERLLGAEIQPLLERLDAELAATGQ 483
+ A LL G P G+ F Y L AWV QPSPCCAAA+VAGA N L G R D +AL VL A+ L V K A FER LGA++ P+L+ + + +++ G+
Sbjct: 112 ITATLLGPWNGRL-PTKEDGVHQFGCSYDGALLDAWVKQPSPCCAAAAVAGAINGLSGLHRHDDNALGPLDVLAAMRGVLRDLVESKIASFERKLGADLAPVLDAVASRVSSDGR 225
BLAST of mRNA_P-wetherbeei_contig8697.2.1 vs. uniprot
Match: F0YG45_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG45_AURAN) HSP 1 Score: 74.3 bits (181), Expect = 2.960e-10 Identity = 55/149 (36.91%), Postives = 75/149 (50.34%), Query Frame = 1
Query: 169 GDFFPPHRAGLRAFALCYSVELFAAWVPQPSPCCAAASVAGACNALLGRTRSDTSALNHTHVLRALATNLEATVSKKRARFERLLGAEIQPLLERLDAELAATGQSLLAARR---SAAPTVPQLLRMVDSIAKREIGGTEAVFDRLREL 606
G P + FA L AAWV QPSPCCAAA++AGA NAL R D A+ +L + L TV+KKRA FER LGA++ PLL + +A G+ A+ + +A+ T LL V + + A +R R +
Sbjct: 66 GGRLPGLEERVTTFACAVDSALLAAWVKQPSPCCAAAALAGAMNALARVGRRDARAMQPLEILATMRGLLRDTVAKKRASFERKLGADLGPLLAAVADRVALDGKRFGASTKKEAAASVTAKYLLGAVRAEVEARGDAIAAAVERQRNV 214
BLAST of mRNA_P-wetherbeei_contig8697.2.1 vs. uniprot
Match: A0A482SGF4_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SGF4_9ARCH) HSP 1 Score: 65.5 bits (158), Expect = 2.970e-9 Identity = 40/90 (44.44%), Postives = 54/90 (60.00%), Query Frame = 1
Query: 205 AFALCYSVELFAAWVPQPSPCCAAASVAGACNALLGRTRSDTSALNHTHVLRALATNLEATVSKKRARFERLLGAEIQ------PLLERL 456
+F L Y+ +F WV QPS CCAAAS+AGA NAL RSD+SAL H ++L+ L+ +KK F R LGA + PL+++L
Sbjct: 36 SFGLHYNDAVFKGWVKQPSACCAAASIAGAWNALHQLRRSDSSALTHLNILQLYEEILQERYNKKLGSFGRKLGASLTEDEFWIPLIDKL 125
BLAST of mRNA_P-wetherbeei_contig8697.2.1 vs. uniprot
Match: A0A8J6CCA9_DIALT (Uncharacterized protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCA9_DIALT) HSP 1 Score: 69.7 bits (169), Expect = 6.220e-9 Identity = 38/73 (52.05%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 208 FALCYSVELFAAWVPQPSPCCAAASVAGACNALLGRTRSDTSALNHTHVLRALATNLEATVSKKRARFERLLG 426
F++ +S F W QPSPCCAAASVAGACNA+LG S AL++ H+ L L +KKRA ERLLG
Sbjct: 51 FSMAFSRAAFDGWARQPSPCCAAASVAGACNAVLGLCASSEDALSYVHIAALLHGLLADQAAKKRAAVERLLG 123
BLAST of mRNA_P-wetherbeei_contig8697.2.1 vs. uniprot
Match: F2UGP8_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UGP8_SALR5) HSP 1 Score: 68.9 bits (167), Expect = 1.110e-8 Identity = 55/155 (35.48%), Postives = 76/155 (49.03%), Query Frame = 1
Query: 166 EGDFFPPHRAGLRAFALCYSVELFAAWVPQPSPCCAAASVAGACNALLGRTRSDTSALNHTHVLRALATNLEATVSKKRARFERLLGAEIQPLLERLDAELAATGQSLLAARRSAAPTVPQLLRMVDSIAKREIGGTEAVFDRLRELMVEDASAR 630
+GD P + R + Y+ +LF +WV Q SP CAAASVAGA NAL R R D AL+ +L L+ V K R LGA+ L+E+L +LA QS A + L + + + ++ TE VF +LR + A AR
Sbjct: 64 DGDSMPTDK---RRLCVAYNRQLFDSWVKQFSPACAAASVAGAFNALSRRRRDDEQALSQHDLLEEFRNVLDGIVIKHHRRCSFALGADPSDLVEKLKLKLAENDQSF-ATKFPKGKKKKILWQHIRELVDDDVSNTERVFAQLRTVYGRHAPAR 214 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8697.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8697.2.1 >prot_P-wetherbeei_contig8697.2.1 ID=prot_P-wetherbeei_contig8697.2.1|Name=mRNA_P-wetherbeei_contig8697.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=461bp MSTISPLDLHKLTPSDSDENLPESGLEPPLHFLLAPLLSKGEGDFFPPHRback to top mRNA from alignment at P-wetherbeei_contig8697:101..2276+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8697.2.1 ID=mRNA_P-wetherbeei_contig8697.2.1|Name=mRNA_P-wetherbeei_contig8697.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2176bp|location=Sequence derived from alignment at P-wetherbeei_contig8697:101..2276+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8697:101..2276+ >mRNA_P-wetherbeei_contig8697.2.1 ID=mRNA_P-wetherbeei_contig8697.2.1|Name=mRNA_P-wetherbeei_contig8697.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1383bp|location=Sequence derived from alignment at P-wetherbeei_contig8697:101..2276+ (Phaeothamnion wetherbeei SAG_119_79)back to top |