mRNA_P-wetherbeei_contig867.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig867.4.1 vs. uniprot
Match: A0A812VRA9_SYMMI (Bud-31 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VRA9_SYMMI) HSP 1 Score: 199 bits (505), Expect = 6.520e-59 Identity = 86/115 (74.78%), Postives = 102/115 (88.70%), Query Frame = 1
Query: 136 SRYVYDMYHIYKRIPRQVFDYCVRNKIIDAGLAQKWRKPGYERLCSTYVVNSANYKFGTVSICRVPKQYLAPGTEVEDPTTGCHGCASGPGGHRNIFGNKYGQYLAAIQVAREAK 480
SRY++DM++ Y RI R+V+DYC+RNK++DAGL KW+KPGYERLCSTYV+N+ NYKFGTVSICRVP LAPGTE+ED TGC GCASGPGG++NIFGNKYGQYLAAIQ+ARE K
Sbjct: 50 SRYIFDMFYTYNRISREVYDYCIRNKLVDAGLIAKWKKPGYERLCSTYVINTRNYKFGTVSICRVPGHCLAPGTEIEDAVTGCRGCASGPGGNKNIFGNKYGQYLAAIQIARELK 164
BLAST of mRNA_P-wetherbeei_contig867.4.1 vs. uniprot
Match: A0A835YRC4_9STRA (G10 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC4_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.470e-58 Identity = 88/116 (75.86%), Postives = 100/116 (86.21%), Query Frame = 1
Query: 136 SRYVYDMYHIYKRIPRQVFDYCVRNKIIDAGLAQKWRKPGYERLCSTYVVNSANYKFGTVSICRVPKQYLAPGTEVEDPTTGCHGCASGPGGHRNIFGNKYGQYLAAIQVAREAKA 483
SRYVYDMYH+YK I R+V+DYC+R K++DAGL KW+KPGY RLCSTYV+N NYKFGTVSICRVP+Q+L P T VED TGC GCASGPGG RNIFGNKYGQYLAAIQVAR+ +A
Sbjct: 56 SRYVYDMYHVYKEISREVYDYCIRMKLVDAGLMAKWKKPGYGRLCSTYVINPKNYKFGTVSICRVPRQFLEPDTVVEDSNTGCRGCASGPGGQRNIFGNKYGQYLAAIQVARKKRA 171
BLAST of mRNA_P-wetherbeei_contig867.4.1 vs. uniprot
Match: A0A7S3XYK4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYK4_HETAK) HSP 1 Score: 191 bits (486), Expect = 1.190e-56 Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 1
Query: 136 SRYVYDMYHIYKRIPRQVFDYCVRNKIIDAGLAQKWRKPGYERLCSTYVVNSANYKFGTVSICRVPKQYLAPGTEVEDPTTGCHGCASGPGGHRNIFGNKYGQYLAAIQVAREAKA 483
SRY+YDM++IYK I R+V+DYC+R K DA L KW+KPGYERLC T+V+N NYKFGT SICRVPKQYL+ GT VED TTGC GCASGPGG RNIFGNKYGQYLAAIQV REA A
Sbjct: 56 SRYIYDMFYIYKHISREVYDYCIRMKFADAALIAKWKKPGYERLCCTFVINQKNYKFGTTSICRVPKQYLSKGTIVEDVTTGCMGCASGPGGQRNIFGNKYGQYLAAIQVEREAAA 171
BLAST of mRNA_P-wetherbeei_contig867.4.1 vs. uniprot
Match: A0A482SVQ9_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVQ9_9ARCH) HSP 1 Score: 189 bits (481), Expect = 4.280e-55 Identity = 85/115 (73.91%), Postives = 98/115 (85.22%), Query Frame = 1
Query: 136 SRYVYDMYHIYKRIPRQVFDYCVRNKIIDAGLAQKWRKPGYERLCSTYVVNSANYKFGTVSICRVPKQYLAPGTEVEDPTTGCHGCASGPGGHRNIFGNKYGQYLAAIQVAREAK 480
SRYVYDMY+ Y +I +QV+DYC+ NK+IDA L KW+KPGYERLCSTYV+N NYKFGTVS+CRVPKQ+LAPGTE+EDP TGC GCASG + NIF NKYGQYLAAIQVARE +
Sbjct: 78 SRYVYDMYYTYNKISKQVYDYCITNKLIDAALVAKWKKPGYERLCSTYVINPRNYKFGTVSVCRVPKQFLAPGTEIEDPVTGCRGCASGS--NHNIFDNKYGQYLAAIQVAREER 190
BLAST of mRNA_P-wetherbeei_contig867.4.1 vs. uniprot
Match: A0A7R9UFU0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFU0_9STRA) HSP 1 Score: 188 bits (477), Expect = 8.850e-55 Identity = 88/113 (77.88%), Postives = 97/113 (85.84%), Query Frame = 1
Query: 136 SRYVYDMYHIYKRIPRQVFDYCVRNKIIDAGLAQKWRKPGYERLCSTYVVNSANYKFGTVSICRVPKQYLAPGTEVEDPTTGCHGCASGPGGHRNIFGNKYGQYLAAIQVARE 474
+RYVYDMY+ Y RI R+V+DYCVRN+IID+ LA KW+KPGYERLCSTYV+N+ NYKFGTVSICRVP L PGT VED TTGC GCASG GG RNIFGNKYGQYLA IQVARE
Sbjct: 83 TRYVYDMYYKYGRISREVYDYCVRNRIIDSALAAKWKKPGYERLCSTYVINTLNYKFGTVSICRVPNFKLPPGTIVEDVTTGCRGCASGRGGMRNIFGNKYGQYLADIQVARE 195
BLAST of mRNA_P-wetherbeei_contig867.4.1 vs. uniprot
Match: A0A6U3Y7T5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3Y7T5_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.150e-53 Identity = 82/113 (72.57%), Postives = 98/113 (86.73%), Query Frame = 1
Query: 136 SRYVYDMYHIYKRIPRQVFDYCVRNKIIDAGLAQKWRKPGYERLCSTYVVNSANYKFGTVSICRVPKQYLAPGTEVEDPTTGCHGCASGPGGHRNIFGNKYGQYLAAIQVARE 474
SRYVYD+Y+ YK+I ++V++YC+R+K++DAGL KW+KPGYERLCSTYV+N+ NYKFGTVSICRVPK L VEDP TGC GCASGPGG RNIFGNK+GQYLAAIQV+RE
Sbjct: 71 SRYVYDLYYKYKKISKEVYEYCIRHKLVDAGLIAKWKKPGYERLCSTYVINTKNYKFGTVSICRVPKHSLGKDVIVEDPHTGCLGCASGPGGQRNIFGNKFGQYLAAIQVSRE 183
BLAST of mRNA_P-wetherbeei_contig867.4.1 vs. uniprot
Match: A0A7S2RFN8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFN8_9STRA) HSP 1 Score: 184 bits (468), Expect = 1.600e-53 Identity = 83/116 (71.55%), Postives = 97/116 (83.62%), Query Frame = 1
Query: 136 SRYVYDMYHIYKRIPRQVFDYCVRNKIIDAGLAQKWRKPGYERLCSTYVVNSANYKFGTVSICRVPKQYLAPGTEVEDPTTGCHGCASGPGGHRNIFGNKYGQYLAAIQVAREAKA 483
SRYV+DMY+ YK+I ++V+DYC+R K++DA L KW+K GYERLCSTYV+N+ NYKFGT SICRVP LAP VED TTGC GCASGPGG RNIFGNKYGQYLAAIQ+ARE +A
Sbjct: 56 SRYVFDMYYKYKKISKEVYDYCIRMKLVDAALIAKWKKSGYERLCSTYVINTKNYKFGTTSICRVPGHALAPDVIVEDRTTGCQGCASGPGGQRNIFGNKYGQYLAAIQIAREEEA 171
BLAST of mRNA_P-wetherbeei_contig867.4.1 vs. uniprot
Match: D8LNR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR9_ECTSI) HSP 1 Score: 185 bits (469), Expect = 3.460e-53 Identity = 81/113 (71.68%), Postives = 98/113 (86.73%), Query Frame = 1
Query: 136 SRYVYDMYHIYKRIPRQVFDYCVRNKIIDAGLAQKWRKPGYERLCSTYVVNSANYKFGTVSICRVPKQYLAPGTEVEDPTTGCHGCASGPGGHRNIFGNKYGQYLAAIQVARE 474
SRYVYDM+++YK I + V +YC+R+K++D L KW+KPGYERLCSTYV+N+ NYKFGTVSICRVPKQYL+ GT VED TGC GCA+G GG++NIFGNKYGQYLAAIQVAR+
Sbjct: 56 SRYVYDMHYVYKAITKDVLEYCIRSKLVDGPLMAKWKKPGYERLCSTYVINTKNYKFGTVSICRVPKQYLSAGTVVEDVNTGCRGCATGAGGNKNIFGNKYGQYLAAIQVARQ 168
BLAST of mRNA_P-wetherbeei_contig867.4.1 vs. uniprot
Match: A0A7S1XLK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLK8_9STRA) HSP 1 Score: 188 bits (477), Expect = 8.390e-53 Identity = 86/115 (74.78%), Postives = 97/115 (84.35%), Query Frame = 1
Query: 136 SRYVYDMYHIYKRIPRQVFDYCVRNKIIDAGLAQKWRKPGYERLCSTYVVNSANYKFGTVSICRVPKQYLAPGTEVEDPTTGCHGCASGPGGHRNIFGNKYGQYLAAIQVAREAK 480
+RYVYDMY+ Y RI R+V+DYCVRN+IID LA KW+KPGYERLCSTYV+N+ NYKF TVSICRVPK L PGT VED T GC GC+SG GG++NIFGNKYGQYLA IQVARE K
Sbjct: 93 TRYVYDMYYKYGRISREVYDYCVRNRIIDGALAAKWKKPGYERLCSTYVINTRNYKFATVSICRVPKYKLPPGTTVEDVTVGCRGCSSGKGGYKNIFGNKYGQYLADIQVARELK 207
BLAST of mRNA_P-wetherbeei_contig867.4.1 vs. uniprot
Match: A0A484DVQ2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVQ2_BRELC) HSP 1 Score: 180 bits (456), Expect = 7.880e-52 Identity = 79/116 (68.10%), Postives = 95/116 (81.90%), Query Frame = 1
Query: 136 SRYVYDMYHIYKRIPRQVFDYCVRNKIIDAGLAQKWRKPGYERLCSTYVVNSANYKFGTVSICRVPKQYLAPGTEVEDPTTGCHGCASGPGGHRNIFGNKYGQYLAAIQVAREAKA 483
SRYVYDM+H YK+I RQV+DYCVR K++DA L KW+KPGYERLCST+ +NS NY +GTVSICRVP+Q L+ G V++ +GC GCASGPGG+ NIFGNKYGQYLA IQ+ RE A
Sbjct: 53 SRYVYDMFHKYKKISRQVYDYCVRRKLVDASLIAKWKKPGYERLCSTFAINSKNYNYGTVSICRVPRQQLSEGQVVQEKHSGCRGCASGPGGYHNIFGNKYGQYLARIQIMREEAA 168 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig867.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig867.4.1 >prot_P-wetherbeei_contig867.4.1 ID=prot_P-wetherbeei_contig867.4.1|Name=mRNA_P-wetherbeei_contig867.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=239bp MYHIYKRIPRQVFDYCVRNKIIDAGLAQKWRKPGYERLCSTYVVNSANYKback to top mRNA from alignment at P-wetherbeei_contig867:7585..8559- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig867.4.1 ID=mRNA_P-wetherbeei_contig867.4.1|Name=mRNA_P-wetherbeei_contig867.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=975bp|location=Sequence derived from alignment at P-wetherbeei_contig867:7585..8559- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig867:7585..8559- >mRNA_P-wetherbeei_contig867.4.1 ID=mRNA_P-wetherbeei_contig867.4.1|Name=mRNA_P-wetherbeei_contig867.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=717bp|location=Sequence derived from alignment at P-wetherbeei_contig867:7585..8559- (Phaeothamnion wetherbeei SAG_119_79)back to top |