mRNA_P-wetherbeei_contig8582.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8582.2.1 vs. uniprot
Match: D8LQG1_ECTSI (DEP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG1_ECTSI) HSP 1 Score: 102 bits (255), Expect = 8.950e-23 Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 2
Query: 2 LCGRMREGIVVCDRIYSFKAYEGCFTGADAVTWMVAADVAGSPNEALEIGRRLMEFGLIDHVMGDHRFKDEPIFYQFKGADARWESVQNMSDEAAKAMAYRMNLELE 322
LC +MR I + DR Y ++ F G+ AV WM +A S NEA+ IG+RL+EFGL+DHV RF DE +FY+F+ A W M +AAKA+A RMN+E+E
Sbjct: 11 LCLKMRSCIPIEDRDYGSTIFKKSFVGSQAVDWMCDTGIAASRNEAVAIGQRLVEFGLVDHVNSIFRFMDELLFYEFRTKGANWAKATEMDIDAAKALAIRMNMEIE 117
BLAST of mRNA_P-wetherbeei_contig8582.2.1 vs. uniprot
Match: A0A835W5K2_CHLIN (DEP domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W5K2_CHLIN) HSP 1 Score: 83.6 bits (205), Expect = 5.150e-16 Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 2
Query: 2 LCGRMREGIVVCDRIYSFKAYEGCFTGADAVTWMVAADVAGSPNEALEIGRRLMEFGLIDHVMGDHRFKDEPIFYQFKGAD 244
L +R G+ + DR Y F+ Y CF G +AV W+VAA A P EA+ +G +ME GL HV+ +HRF+D+ +FY+F D
Sbjct: 27 LAAALRGGVRIKDRRYLFRCYRACFVGQEAVAWLVAAGAAAGPAEAVALGNSMMEAGLFHHVVYEHRFEDDYLFYRFTDDD 107
BLAST of mRNA_P-wetherbeei_contig8582.2.1 vs. uniprot
Match: A0A2K3DW24_CHLRE (DEP domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DW24_CHLRE) HSP 1 Score: 83.2 bits (204), Expect = 7.040e-16 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 2
Query: 2 LCGRMREGIVVCDRIYSFKAYEGCFTGADAVTWMVAADVAGSPNEALEIGRRLMEFGLIDHVMGDHRFKDEPIFYQF 232
L MR G+ + DR Y F+ Y CF G +AV W+VAA A P EA+ +G +ME GL HV+ +HRF+D+ +FY+F
Sbjct: 12 LATAMRGGVRIKDRRYLFRCYRACFVGQEAVAWLVAAGAAAGPAEAVALGNSMMEAGLFHHVVYEHRFEDDYLFYRF 88
BLAST of mRNA_P-wetherbeei_contig8582.2.1 vs. uniprot
Match: A0A835WVW9_9CHLO (DEP domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WVW9_9CHLO) HSP 1 Score: 81.6 bits (200), Expect = 2.440e-15 Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 2
Query: 2 LCGRMREGIVVCDRIYSFKAYEGCFTGADAVTWMVAADVAGSPNEALEIGRRLMEFGLIDHVMGDHRFKDEPIFYQFKGAD 244
L +R G+ V DR Y F+ Y CF G +AV W+VAA A EA+ +G +ME GL HV+ +HRF+D+ +FY+F D
Sbjct: 12 LAAALRRGVRVKDRRYLFRCYRACFVGQEAVAWLVAAGAAAGAAEAVALGNSMMEAGLFHHVVYEHRFEDDYLFYRFTDDD 92
BLAST of mRNA_P-wetherbeei_contig8582.2.1 vs. uniprot
Match: A0A4Y6Q314_9DELT (FAD-containing oxidoreductase n=2 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6Q314_9DELT) HSP 1 Score: 74.7 bits (182), Expect = 6.050e-13 Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 2
Query: 2 LCGRMREGIVVCDRIYSFKAYEGCFTGADAVTWMVAADVAGSPNEALEIGRRLMEFGLIDHVMGDHRFKDEPIFYQF 232
L ++RE + + DR Y + YE CF G +A WMV A VA EA IG L+E G+ HV+ +H+F+++ +FY+F
Sbjct: 6 LIEKLRENVEITDRTYRLETYEDCFVGEEACAWMVEAGVARDIEEAERIGNLLLEAGVFHHVLREHKFENDYLFYRF 82
BLAST of mRNA_P-wetherbeei_contig8582.2.1 vs. uniprot
Match: A0A6P0Y2Y8_9CYAN (DEP domain-containing protein (Fragment) n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0Y2Y8_9CYAN) HSP 1 Score: 68.2 bits (165), Expect = 4.230e-12 Identity = 29/74 (39.19%), Postives = 50/74 (67.57%), Query Frame = 2
Query: 11 RMREGIVVCDRIYSFKAYEGCFTGADAVTWMVAADVAGSPNEALEIGRRLMEFGLIDHVMGDHRFKDEPIFYQF 232
R G+ + DR + FK ++ F G+DAV W++ + A + EA+ +G+ +++ G+I HV+ +H FKDEP+FY+F
Sbjct: 31 RGANGVSIKDRKFQFKKFQNVFFGSDAVEWLMTHERA-TREEAILMGQLMLQQGIIHHVLDEHNFKDEPLFYRF 103
BLAST of mRNA_P-wetherbeei_contig8582.2.1 vs. uniprot
Match: A0A845XCG9_9CYAN (DEP domain-containing protein n=1 Tax=Spirulina sp. SIO3F2 TaxID=2607816 RepID=A0A845XCG9_9CYAN) HSP 1 Score: 67.0 bits (162), Expect = 6.240e-12 Identity = 34/74 (45.95%), Postives = 48/74 (64.86%), Query Frame = 2
Query: 11 RMREGIVVCDRIYSFKAYEGCFTGADAVTWMVAADVAGSPNEALEIGRRLMEFGLIDHVMGDHRFKDEPIFYQF 232
R +G+ V DR + K Y CF G++AV W+VA + S EALE+G++L+E I HV+ +H FKDE +FY F
Sbjct: 20 RSPDGVDVQDRRHQLKTYPQCFVGSEAVDWLVA-HLRISREEALEVGQQLIERQWITHVLRNHPFKDEYLFYCF 92
BLAST of mRNA_P-wetherbeei_contig8582.2.1 vs. uniprot
Match: A0A7S0N8A5_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N8A5_9CHLO) HSP 1 Score: 68.9 bits (167), Expect = 1.070e-11 Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 2
Query: 2 LCGRMREGIVVCDRIYSFKAYEGCFTGADAVTWMVAADVAGSPNEALEIGRRLMEFGLIDHVMGDHRFKDEPIFYQF 232
L RM GI V D ++ AYE CFTG +AV WMV A A S AL +G +L+ LI H+ ++ F++ IFY+F
Sbjct: 24 LVQRMAAGIPVRDHLHYMLAYEACFTGREAVEWMVGAGEAESAERALCLGNQLLRANLIFHIYNENPFENATIFYRF 100
BLAST of mRNA_P-wetherbeei_contig8582.2.1 vs. uniprot
Match: A0A0L0DTK9_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DTK9_THETB) HSP 1 Score: 70.9 bits (172), Expect = 1.240e-11 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 2
Query: 14 MREGIVVCDRIYSFKAYEGCFTGADAVTWMVAADVAGSPNEALEIGRRLMEFGLIDHVMGDHRFKDEPIFYQF 232
+R G+ V DR Y FK Y CF G++AV ++V S EA+E+G ++ GL HV+ DH FKD+ +FY F
Sbjct: 143 VRTGVEVKDRKYRFKKYRQCFVGSEAVDFLVDNGYVASRFEAVELGEKMRAAGLFSHVVDDHGFKDDKLFYAF 215
BLAST of mRNA_P-wetherbeei_contig8582.2.1 vs. uniprot
Match: X6MLF0_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MLF0_RETFI) HSP 1 Score: 68.9 bits (167), Expect = 1.920e-11 Identity = 32/81 (39.51%), Postives = 53/81 (65.43%), Query Frame = 2
Query: 11 RMREGIVVCDRIYSFKAYEGCFTGADAVTWMVAADVAGSPNEALEIGRRLMEFGLIDHVMGDHRFKDEPIFYQF-KGADAR 250
++ E + + DR Y FK Y+ CF G D VT+ V + + + +EA+++G L++ I HV+ DH FK+E +FY+F +GA +R
Sbjct: 17 KISEHVEIKDRAYHFKIYKECFVGKDLVTYFVNSGLVKTVSEAVDLGNLLIKEDYIKHVLYDHGFKNEKLFYEFTEGAKSR 97 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8582.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8582.2.1 >prot_P-wetherbeei_contig8582.2.1 ID=prot_P-wetherbeei_contig8582.2.1|Name=mRNA_P-wetherbeei_contig8582.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp MREGIVVCDRIYSFKAYEGCFTGADAVTWMVAADVAGSPNEALEIGRRLMback to top mRNA from alignment at P-wetherbeei_contig8582:1678..2092- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8582.2.1 ID=mRNA_P-wetherbeei_contig8582.2.1|Name=mRNA_P-wetherbeei_contig8582.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=415bp|location=Sequence derived from alignment at P-wetherbeei_contig8582:1678..2092- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8582:1678..2092- >mRNA_P-wetherbeei_contig8582.2.1 ID=mRNA_P-wetherbeei_contig8582.2.1|Name=mRNA_P-wetherbeei_contig8582.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig8582:1678..2092- (Phaeothamnion wetherbeei SAG_119_79)back to top |