mRNA_P-wetherbeei_contig8482.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8482.1.1
Unique NamemRNA_P-wetherbeei_contig8482.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8482.1.1 vs. uniprot
Match: D8LQU4_ECTSI (rRNA adenine N(6)-methyltransferase (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQU4_ECTSI)

HSP 1 Score: 375 bits (962), Expect = 2.310e-126
Identity = 190/265 (71.70%), Postives = 217/265 (81.89%), Query Frame = 1
Query:   22 RQRPPTLPAGEFKPKQSLGQNYLSDQNYVAKIVNHFSDNSEGGCRVVELGPGAGALTQMLLERFPRMTAVDIDQRAVELLQESMPELTVVRSD---LDYTALARLRGGPLSVIGNLPYHITSQILFALLDHYSAVRSAIVTMQLEVAQRICARPNTKDYGTLSVAFQLYARPSILFKIPNTVFYPQPKVTSALLGLDFTGRGPNIDPRSLRLVLGTAFQQRRKMLRQSLRGVVPAGRELPAEFAARRPEQLTPDEFVELTARLFG 807
            +++PP+LP GEF+PKQSLGQNYLSDQNYV KI NHF D SEGG RV+ELGPG GALTQ+L ERFP M AVDIDQRA+ELL  +MP L  V SD   LDYT LA LRGGPLSVIGNLPYHITSQILF L DHY +VR A+VTMQLEVAQRI A+ +TK YG LSV FQLYARP +LF+IP TVFYPQP VTSAL+ LDFTG+GP ++   L+ VL +AFQQRRKMLRQSL+ ++ AG++LP EFA RRPEQL P EFVELT  +FG
Sbjct:  123 KRKPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDFTGKGPGVNQACLKSVLSSAFQQRRKMLRQSLKPLLRAGQKLPEEFATRRPEQLEPQEFVELTRAVFG 387          
BLAST of mRNA_P-wetherbeei_contig8482.1.1 vs. uniprot
Match: A0A835Z0Q3_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q3_9STRA)

HSP 1 Score: 357 bits (917), Expect = 2.830e-121
Identity = 183/267 (68.54%), Postives = 215/267 (80.52%), Query Frame = 1
Query:   16 PRRQRPPTLPAGEFKPKQSLGQNYLSDQNYVAKIVNHFSDNSEGGCRVVELGPGAGALTQMLLERFPRMTAVDIDQRAVELLQESMPELTVVRSD---LDYTALARLRGGPLSVIGNLPYHITSQILFALLDHYSAVRSAIVTMQLEVAQRICARPNTKDYGTLSVAFQLYARPSILFKIPNTVFYPQPKVTSALLGLDFTGRGPNIDPRSLRLVLGTAFQQRRKMLRQSLRGVVPAGRELPAEFAARRPEQLTPDEFVELTARLFG 807
            P++ RPPTLPAGE+KPKQSLGQN+LSDQNYV KI + F D+S GG  VVELGPGAGALTQ+L  ++P M AVDID+R+V+ L E++P LTV++SD   +DYT LA  RGG LS+IGNLPYHITSQILF L DHY ++  A+V +QLEVAQRI A PN K+YG LSV FQLY RP ILFKIP TVFYPQPKVTSALL LDFTGRGP++D   L+ VL TAFQQRRKMLRQSLR ++  G  LP +F+A RPEQLTP +FVELT  +FG
Sbjct:   30 PKKMRPPTLPAGEYKPKQSLGQNFLSDQNYVMKICSSFRDSSVGGRSVVELGPGAGALTQVLHAQYPDMMAVDIDERSVQFLAETLPGLTVLQSDVLQIDYTQLAEARGGQLSIIGNLPYHITSQILFMLCDHYRSIARAVVLLQLEVAQRIVAPPNCKEYGILSVVFQLYTRPRILFKIPATVFYPQPKVTSALLSLDFTGRGPDVDRGDLKKVLSTAFQQRRKMLRQSLRPLLTEGVTLPEKFSALRPEQLTPQQFVELTKAIFG 296          
BLAST of mRNA_P-wetherbeei_contig8482.1.1 vs. uniprot
Match: A0A7S3K3Y0_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3Y0_9STRA)

HSP 1 Score: 327 bits (838), Expect = 2.110e-108
Identity = 168/267 (62.92%), Postives = 211/267 (79.03%), Query Frame = 1
Query:   25 QRPPTLPAGEFKPKQSLGQNYLSDQNYVAKIVNHFSDNSEGGCRVVELGPGAGALTQMLLERFPRMTAVDIDQRAVELLQESMPELTVVRSD---LDYTALARLRGGPLSVIGNLPYHITSQILFALLDHYSAVRSAIVTMQLEVAQRICARPNTKDYGTLSVAFQLYARPSILFKIPNTVFYPQPKVTSALLGLDFTGRGPN--IDPRSLRLVLGTAFQQRRKMLRQSLRGVVPA-GRELPAEFAARRPEQLTPDEFVELTARLFG 807
            QRPPTLP+G F+PKQSLGQNYLSDQNYV KI     D+S+ G  VVELGPG GALT++LL  +P M AV+ID+RAV+LL E  P L V+ SD   +DYT LA+L+GG L+VIGNLPY+ITSQILFAL DH++A+R A VTMQ EVAQR+ A+P TK YG LSV FQLYARP ILFKIPNT FYPQPKV+SAL+ ++F    P   +DP+ LRLV+ T+F+QRRKMLRQSL+G++ +  + LP ++A +RPE+L P EF++LTA ++G
Sbjct:   75 QRPPTLPSGTFRPKQSLGQNYLSDQNYVVKITESVEDDSKNGNTVVELGPGLGALTRVLLASYPEMIAVEIDKRAVDLLNERYPSLKVLHSDVLEIDYTKLAQLQGGRLNVIGNLPYYITSQILFALCDHHAAIRRACVTMQWEVAQRLVAQPRTKPYGILSVVFQLYARPQILFKIPNTAFYPQPKVSSALVAIEFLHPRPPLPVDPKKLRLVINTSFRQRRKMLRQSLKGILKSVAKTLPDDWATKRPEELRPPEFLKLTALIYG 341          
BLAST of mRNA_P-wetherbeei_contig8482.1.1 vs. uniprot
Match: A0A7S2V1T1_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1T1_9STRA)

HSP 1 Score: 323 bits (829), Expect = 1.320e-107
Identity = 167/265 (63.02%), Postives = 211/265 (79.62%), Query Frame = 1
Query:   28 RPPTLPAGEFKPKQSLGQNYLSDQNYVAKIVNHFSDNSEGGCRVVELGPGAGALTQMLLERFPRMTAVDIDQRAVELLQESMPELTVVRSDL---DYTALARLRGGPLSVIGNLPYHITSQILFALLDHYSAVRSAIVTMQLEVAQRICARPNTKDYGTLSVAFQLYARPSILFKIPNTVFYPQPKVTSALLGLDFTGR-GP-NIDPRSLRLVLGTAFQQRRKMLRQSLRGVVPAGRELPAEFAARRPEQLTPDEFVELTARLFG 807
            R PTLP+GEF+PKQSLGQNYLSD NY+ KIVN  + +S  G R+VELGPG GALT+ L++R+P MTA+++D RA+E L E++P+LTV+ SD+   ++ AL++L+GGPLSV+GNLPYHITSQILF L D+  AVRSA+VT Q EVAQRIC+ PN+KDYG LSV FQL+ RP ILFKIPNTVFYP PKV SAL+ LDF+ + GP ++D   L+ V+  AFQQRRKMLR+SL+  +  GR+LP +F  +RPEQL P EFVELT  L+G
Sbjct:   49 RAPTLPSGEFRPKQSLGQNYLSDMNYILKIVNAMTCDSSDGQRLVELGPGMGALTRELIKRYPAMTAIEVDPRAIEQLNEALPDLTVIHSDVLQVNWPALSKLKGGPLSVVGNLPYHITSQILFGLADNPQAVRSAVVTTQWEVAQRICSGPNSKDYGILSVVFQLFTRPRILFKIPNTVFYPAPKVASALIELDFSAKEGPKDVDLMKLKKVISAAFQQRRKMLRRSLQPFLQ-GRKLPEQFEDKRPEQLKPQEFVELTKFLYG 312          
BLAST of mRNA_P-wetherbeei_contig8482.1.1 vs. uniprot
Match: A0A6V1RUH5_HETAK (rRNA adenine N(6)-methyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RUH5_HETAK)

HSP 1 Score: 319 bits (817), Expect = 1.670e-105
Identity = 168/268 (62.69%), Postives = 204/268 (76.12%), Query Frame = 1
Query:   28 RPPTLPAGEFKPKQSLGQNYLSDQNYVAKIVNHFSDNSEGGCRVVELGPGAGALTQMLLERFPRMTAVDIDQRAVELLQESMPELTVVRSD---LDYTALARLRGGPLSVIGNLPYHITSQILFALLDHYSAVRSAIVTMQLEVAQRICARPNTKDYGTLSVAFQLYARPSILFKIPNTVFYPQPKVTSALLGLDFTGRGP--NIDPRSLRLVLGTAFQQRRKMLRQSLRGV---VPAGRELPAEFAARRPEQLTPDEFVELTARLFG 807
            R PTLP GEF+PKQSLGQNYLSD NY+ KIV+  +D+S  G RVVE+GPGAGALT+ L  R+P MTAV+IDQR+VELL+E +P   VV SD   +++ A A L+GG LSVIGNLPYHITSQILF L D +  +R A VTMQ EVA+R+CARP +KDYG LSV FQLY++P ILFKIP TVFYPQPKV SALL +DF  +     +   +LR VL T+FQQRRKMLRQSL+ +   +  G  LP E+A +RP+QLTP+EFVELT  L+G
Sbjct:   69 RAPTLPQGEFRPKQSLGQNYLSDMNYIMKIVDSLADDSPDGSRVVEVGPGAGALTEQLARRYPEMTAVEIDQRSVELLKERLPGTRVVHSDCLQVNWPAFAALKGGRLSVIGNLPYHITSQILFTLADSHQFIRQAAVTMQWEVAERVCARPGSKDYGILSVVFQLYSKPKILFKIPPTVFYPQPKVASALLMVDFASKQAPKGVRRATLRKVLNTSFQQRRKMLRQSLKPLLKEIGGGFTLPEEWATKRPQQLTPEEFVELTKLLYG 336          
BLAST of mRNA_P-wetherbeei_contig8482.1.1 vs. uniprot
Match: W7U2X3_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2X3_9STRA)

HSP 1 Score: 319 bits (817), Expect = 3.890e-104
Identity = 175/269 (65.06%), Postives = 206/269 (76.58%), Query Frame = 1
Query:   28 RPPTLPAGEFKPKQSLGQNYLSDQNYVAKIVNHFSDNSEGGCRVVELGPGAGALTQMLLERFPRMTAVDIDQRAVELLQESMPELTVVRSDL---DYTALARLRGGPLSVIGNLPYHITSQILFALLDHYSAVRSAIVTMQLEVAQRICARPNTKDYGTLSVAFQLYARPSILFKIPNTVFYPQPKVTSALLGLDFTG--RGP---NIDPRSLRLVLGTAFQQRRKMLRQSLRGVVPA-GRELPAEFAARRPEQLTPDEFVELTARLFG 807
            RPPTLP+ EF+PKQSLGQN+LSDQNYV KIV    D S GG RVVELGPG GALT++L  R+P M AV+ID RAV LL E++P L VV+SD+   D+TALA LRGGPLSVIGNLPYHITSQILF LLD++  VR A+VTMQLEVAQRI A    KDYG LSV FQLY RP I FK+P TVFYPQPKVTSAL+ LDF     G    +++P +L+ VL  +FQQRRKMLRQSL+G++ + G  L  E+A +RPE+L P +FVELT  LFG
Sbjct:  138 RPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPGGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVHGQPIFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLASRGLTLDEEWATKRPEELEPAQFVELTRLLFG 406          
BLAST of mRNA_P-wetherbeei_contig8482.1.1 vs. uniprot
Match: F0Y6X2_AURAN (rRNA adenine N(6)-methyltransferase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6X2_AURAN)

HSP 1 Score: 306 bits (784), Expect = 6.260e-102
Identity = 161/256 (62.89%), Postives = 199/256 (77.73%), Query Frame = 1
Query:   55 FKPKQSLGQNYLSDQNYVAKIVNHFSDNSEGGCRVVELGPGAGALTQMLLERFPRMTAVDIDQRAVELLQESMPE-LTVVRSDL---DYTALARLRGGPLSVIGNLPYHITSQILFALLDHYSAVRSAIVTMQLEVAQRICARPNTKDYGTLSVAFQLYARPSILFKIPNTVFYPQPKVTSALLGLDFTGRGPN--IDPRSLRLVLGTAFQQRRKMLRQSLRGVVPAGRELPAEFAARRPEQLTPDEFVELTARLF 804
            F+PKQSLGQNYLSDQNY  KIV+   D+SE G RVVELGPG GALT++LL ++P M AV+ID RAVELL+++ P   TV+ SD+   DYT LA  RGG LSVIGNLPY+ITSQILF L DH+++V  A+VTMQ EVA R+ A+P TKDYG LSV FQLYA+P I FKIP+T FYPQPKVTSAL+ +DF   G +  +DPR LR V+ TAF+QRRKMLRQSL+G++  G  LP +FA +RPE+L P EF++LT  ++
Sbjct:    1 FRPKQSLGQNYLSDQNYATKIVDSLGDDSERGRRVVELGPGLGALTRLLLRQYPEMVAVEIDGRAVELLEQTYPAPFTVLHSDVLAVDYTKLAAARGGRLSVIGNLPYYITSQILFCLCDHHASVSRAVVTMQHEVALRLVAKPRTKDYGILSVVFQLYAQPKIAFKIPHTAFYPQPKVTSALVAIDFPEGGVDLPVDPRKLRTVVTTAFRQRRKMLRQSLKGILN-GATLPDQFATKRPEELAPAEFLDLTGAIY 255          
BLAST of mRNA_P-wetherbeei_contig8482.1.1 vs. uniprot
Match: A0A7S4ECJ3_9STRA (rRNA adenine N(6)-methyltransferase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECJ3_9STRA)

HSP 1 Score: 300 bits (768), Expect = 3.650e-98
Identity = 156/264 (59.09%), Postives = 198/264 (75.00%), Query Frame = 1
Query:   34 PTLPAGEFKPKQSLGQNYLSDQNYVAKIVNHFSDNSEGGCRVVELGPGAGALTQMLLERFPRMTAVDIDQRAVELLQESMPE-LTVVRSDL---DYTALARLRGGPLSVIGNLPYHITSQILFALLDHYSAVRSAIVTMQLEVAQRICARPNTKDYGTLSVAFQLYARPSILFKIPNTVFYPQPKVTSALLGLDFTGRGP--NIDPRSLRLVLGTAFQQRRKMLRQSLRGVVPAGRELPAEFAARRPEQLTPDEFVELTARLFG 807
            P LP G+F+PKQSLGQNYL D NY A+IV+    +SE G RVVELGPG GALT++L   +P M AV++D+RA+ LL+E  PE +T++  D+   DY+AL+  RGG LS+IGNLPY+ITSQILF L DH+++V+ A+VTMQ EVAQR+ A+P T+DYG LSV FQLYA P I  KIPNT FYP PKVTSAL+ +DF        + P  LR VL TAF+QRRKMLRQSL+ ++  G+  P EFA +RPE+L P+EF+ELTA +FG
Sbjct:   65 PKLPKGQFRPKQSLGQNYLQDPNYAARIVDALQCDSERGKRVVELGPGLGALTKLLSREYPEMVAVELDERAIPLLRERYPEPITILEGDVLAVDYSALSAARGGKLSIIGNLPYYITSQILFCLCDHHASVKKAVVTMQWEVAQRLVAKPRTRDYGILSVVFQLYASPKITCKIPNTAFYPVPKVTSALVTVDFPEDRELFPVQPAKLRTVLNTAFRQRRKMLRQSLKSILN-GKPCPEEFATKRPEELKPEEFLELTALIFG 327          
BLAST of mRNA_P-wetherbeei_contig8482.1.1 vs. uniprot
Match: A0A0G4G4E0_VITBC (rRNA adenine N(6)-methyltransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G4E0_VITBC)

HSP 1 Score: 296 bits (758), Expect = 5.680e-97
Identity = 155/271 (57.20%), Postives = 199/271 (73.43%), Query Frame = 1
Query:   13 EPRRQRPPTLPAGEFKPKQSLGQNYLSDQNYVAKIVNHFSDNSEGGCRVVELGPGAGALTQMLLERFPRMTAVDIDQRAVELLQESMPELTVVRSDL---DYTALARLRGGPLSVIGNLPYHITSQILFALLDHYSAVRSAIVTMQLEVAQRICARPNTKDYGTLSVAFQLYARPSILFKIPNTVFYPQPKVTSALLGLDFTGRGP--NIDPRSLRLVLGTAFQQRRKMLRQSLRGVV-PAGRELPAEFAARRPEQLTPDEFVELTARLFG 807
            E  + RPPTLP+GEF+PKQSLGQNYLSDQNYV KI +   D SEGG RV+ELGPGAGALT++L ER+P MTAV++D+RA+ LL  ++P+L ++  D+   ++ +LAR +GG +SVIGNLPY+ITSQILF L+D Y A+  A+VT Q EVA+R+ ARP    Y  LSV FQLY  P I+FKIP  VF+P PKV SAL+ L F    P   +DP  L+ V+ +AF+QRRKMLRQSL+GV   AG  LP ++   RP+ +TP +FVE+T  LFG
Sbjct:   36 EDEKDRPPTLPSGEFRPKQSLGQNYLSDQNYVRKICDALIDTSEGGSRVIELGPGAGALTRLLHERYPLMTAVELDERAISLLSRNIPDLDIIHDDVLQVNWMSLARAKGGRVSVIGNLPYYITSQILFCLVDSYPAIDQAVVTTQWEVAERLTARPGDSQYSILSVVFQLYCEPRIVFKIPPQVFFPVPKVDSALVHLRFPQHRPPLGVDPIHLKKVVHSAFRQRRKMLRQSLKGVAHEAGVALPPQWGVLRPQAMTPQQFVEVTKILFG 306          
BLAST of mRNA_P-wetherbeei_contig8482.1.1 vs. uniprot
Match: A0A4D9CR67_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CR67_9STRA)

HSP 1 Score: 316 bits (810), Expect = 3.160e-95
Identity = 174/269 (64.68%), Postives = 205/269 (76.21%), Query Frame = 1
Query:   28 RPPTLPAGEFKPKQSLGQNYLSDQNYVAKIVNHFSDNSEGGCRVVELGPGAGALTQMLLERFPRMTAVDIDQRAVELLQESMPELTVVRSDL---DYTALARLRGGPLSVIGNLPYHITSQILFALLDHYSAVRSAIVTMQLEVAQRICARPNTKDYGTLSVAFQLYARPSILFKIPNTVFYPQPKVTSALLGLDFT--GRGP---NIDPRSLRLVLGTAFQQRRKMLRQSLRGVVPA-GRELPAEFAARRPEQLTPDEFVELTARLFG 807
            RPPTLP+ EF+PKQSLGQN+LSDQNYV KIV    D S  G RVVELGPG GALT++L  R+P M AV+ID RAV LL E++P L VV+SD+   D+TALA LRGGPLSVIGNLPYHITSQILF LLD++  VR A+VTMQLEVAQRI A    KDYG LSV FQLY RP I FK+P TVFYPQPKVTSAL+ LDF     G    +++P +L+ VL  +FQQRRKMLRQSL+G++ + G  L  E+A +RPE+L P +FVELT  LFG
Sbjct:   89 RPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPEGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPSLKVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPAHGQPLFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLSSRGLTLDEEWATKRPEELEPAQFVELTRLLFG 357          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8482.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQU4_ECTSI2.310e-12671.70rRNA adenine N(6)-methyltransferase (Fragment) n=2... [more]
A0A835Z0Q3_9STRA2.830e-12168.54rRNA adenine N(6)-methyltransferase n=1 Tax=Tribon... [more]
A0A7S3K3Y0_9STRA2.110e-10862.92rRNA adenine N(6)-methyltransferase n=1 Tax=Aureou... [more]
A0A7S2V1T1_9STRA1.320e-10763.02rRNA adenine N(6)-methyltransferase n=1 Tax=Fibroc... [more]
A0A6V1RUH5_HETAK1.670e-10562.69rRNA adenine N(6)-methyltransferase n=1 Tax=Hetero... [more]
W7U2X3_9STRA3.890e-10465.06rRNA adenine N(6)-methyltransferase n=1 Tax=Nannoc... [more]
F0Y6X2_AURAN6.260e-10262.89rRNA adenine N(6)-methyltransferase (Fragment) n=1... [more]
A0A7S4ECJ3_9STRA3.650e-9859.09rRNA adenine N(6)-methyltransferase n=2 Tax=Pelago... [more]
A0A0G4G4E0_VITBC5.680e-9757.20rRNA adenine N(6)-methyltransferase n=2 Tax=Vitrel... [more]
A0A4D9CR67_9STRA3.160e-9564.68Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8482contigP-wetherbeei_contig8482:953..2572 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LQU4
Preferred nameTFB2M
PFAMsRrnaAD
Model size807
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC03257
KEGG koko:K14191,ko:K17653
KEGG ReactionR10716
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0000179,GO:0000959,GO:0001510,GO:0003674,GO:0003712,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006364,GO:0006390,GO:0006391,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009058,GO:0009059,GO:0009295,GO:0009451,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022613,GO:0031167,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0032259,GO:0032774,GO:0034470,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042254,GO:0042645,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097659,GO:0140053,GO:0140098,GO:0140102,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons4
Evalue3.79e-127
EggNOG OGsCOG0030@1|root,KOG0820@2759|Eukaryota
Ec32 ortholog descriptionchloroplast dimethyladenosine synthase
Ec32 orthologEc-24_002310.1
EC2.1.1.183
DescriptionrRNA (adenine-N6,N6-)-dimethyltransferase activity
Cds size807
COG categoryJ
BRITEko00000,ko01000,ko03009,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187042.899476-CDS-P-wetherbeei_contig8482:952..11471683187042.899476-CDS-P-wetherbeei_contig8482:952..1147Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8482 953..1147 +
1683187042.914595-CDS-P-wetherbeei_contig8482:1330..14351683187042.914595-CDS-P-wetherbeei_contig8482:1330..1435Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8482 1331..1435 +
1683187042.9242368-CDS-P-wetherbeei_contig8482:1799..20501683187042.9242368-CDS-P-wetherbeei_contig8482:1799..2050Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8482 1800..2050 +
1683187042.9332402-CDS-P-wetherbeei_contig8482:2316..25721683187042.9332402-CDS-P-wetherbeei_contig8482:2316..2572Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8482 2317..2572 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8482.1.1prot_P-wetherbeei_contig8482.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8482 953..2572 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8482.1.1

>prot_P-wetherbeei_contig8482.1.1 ID=prot_P-wetherbeei_contig8482.1.1|Name=mRNA_P-wetherbeei_contig8482.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp
MEDREPRRQRPPTLPAGEFKPKQSLGQNYLSDQNYVAKIVNHFSDNSEGG
CRVVELGPGAGALTQMLLERFPRMTAVDIDQRAVELLQESMPELTVVRSD
LDYTALARLRGGPLSVIGNLPYHITSQILFALLDHYSAVRSAIVTMQLEV
AQRICARPNTKDYGTLSVAFQLYARPSILFKIPNTVFYPQPKVTSALLGL
DFTGRGPNIDPRSLRLVLGTAFQQRRKMLRQSLRGVVPAGRELPAEFAAR
RPEQLTPDEFVELTARLFG
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mRNA from alignment at P-wetherbeei_contig8482:953..2572+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8482.1.1 ID=mRNA_P-wetherbeei_contig8482.1.1|Name=mRNA_P-wetherbeei_contig8482.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1620bp|location=Sequence derived from alignment at P-wetherbeei_contig8482:953..2572+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGACAGAGAGCCAAGAAGGCAGCGGCCACCGACTCTTCCAGCCGG AGAATTCAAGCCAAAGCAAAGTCTGGGCCAAAATTACCTCAGCGATCAAA ACTACGTTGCGAAGATTGTGAATCACTTTAGCGATAACAGCGAAGGAGGA TGCCGCGTGGTAGAGCTCGGACCCGGCGCTGGCGCCTTGACGCAGGTGAG AAAGGTTTAGAATAGGAAGCTTCTGCCCCTCGCCAAAACGATGCTTTCTC GTGCTTTCTCTTCAACGGAAGTTCCAAAAAGCAGTGAAACGGCAGTTTGG ATGTAAGAAGAAAGTGGACTCGGCTTCACGACGAAGTGGTTGTGTGATTA CCATTCTCCTGCTCTTTCCTTTGCGCAGATGTTGCTGGAGCGTTTTCCCC GAATGACGGCGGTGGACATCGATCAGCGCGCCGTGGAGCTTCTCCAGGAG TCCATGCCCGAACTGACAGTGGTTCGGTCGGATGTGCTGCAGGCGAGCAA CACGAGGCTATCTCTTGGGTATCATGCTGCGTGGATTGGAATGCCAGCTT ATGTTTTCCCTCTCTCTTGCGTCATTTGGCCTGCCATTTTTTTGGCGTAA ATGATGACGTTTATCTAGTGTAGAAACTGCAAAGATGGCGAAAGTTACGG AGCCCTCTCTGTCACTCTGCGCACTTTTTCGATGCCACTTGGCTATGCGC CGTTGCCCGCGATTTCCGCCTCCCGTGCAACGCCTCTGCCTGCCCAATCT TTCAACTTGCGCTATCTTGTAACCTTACAACGGCTAAACCCCAATTCCCT TTGTCTCGCCTGCCTCCTCCCTCTACCTCTCCGGCCTCTCCCAACAGCTG GACTACACGGCCCTGGCGCGGCTTCGCGGCGGCCCCCTTTCCGTCATCGG CAACCTCCCTTACCACATCACCTCCCAAATTCTCTTCGCCCTCCTAGACC ACTATTCGGCCGTCCGGTCGGCTATCGTCACAATGCAGCTGGAGGTCGCG CAGCGCATCTGCGCGCGGCCGAACACCAAGGATTATGGCACGCTGAGCGT GGCGTTCCAGCTGTACGCCCGCCCGAGCATCCTCTTCAAGATCCCCAAGT GAGAATGCAAAGTGAACGGGTTTTACAGATTTCGCTTTTAAAAACTTGTC ACGAGAACGCAATCTCTAAAAATTAAAGTAAGAAGAGTTACTAACGAACC CAGGTGTCAGCGTGGTGATTGTTGGTCTAGTTGTTAGCCTTTTAGATCTG CATCACCTAATATTACCATTCCCCCTCCCATGCATAAGTGTCCTGCTGCC TTCCTGCTGCTTTCTCGCCGGCGTCTGTCGCCGTCCCATTGCCCCACGTT TTCTGTTTCCGCAGCACCGTCTTCTACCCGCAGCCCAAGGTAACCTCAGC CCTCCTCGGGCTGGACTTCACCGGACGTGGCCCGAACATTGACCCGCGCT CCCTGCGGCTCGTGCTGGGCACCGCCTTCCAGCAACGGCGCAAGATGCTG CGGCAGAGCCTCCGCGGCGTTGTGCCCGCCGGGCGGGAGTTACCGGCGGA GTTCGCTGCGCGACGGCCAGAGCAGCTGACGCCCGACGAGTTTGTCGAGC TGACGGCCCGACTATTCGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8482:953..2572+

>mRNA_P-wetherbeei_contig8482.1.1 ID=mRNA_P-wetherbeei_contig8482.1.1|Name=mRNA_P-wetherbeei_contig8482.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig8482:953..2572+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGACAGAGAGCCAAGAAGGCAGCGGCCACCGACTCTTCCAGCCGG
AGAATTCAAGCCAAAGCAAAGTCTGGGCCAAAATTACCTCAGCGATCAAA
ACTACGTTGCGAAGATTGTGAATCACTTTAGCGATAACAGCGAAGGAGGA
TGCCGCGTGGTAGAGCTCGGACCCGGCGCTGGCGCCTTGACGCAGATGTT
GCTGGAGCGTTTTCCCCGAATGACGGCGGTGGACATCGATCAGCGCGCCG
TGGAGCTTCTCCAGGAGTCCATGCCCGAACTGACAGTGGTTCGGTCGGAT
CTGGACTACACGGCCCTGGCGCGGCTTCGCGGCGGCCCCCTTTCCGTCAT
CGGCAACCTCCCTTACCACATCACCTCCCAAATTCTCTTCGCCCTCCTAG
ACCACTATTCGGCCGTCCGGTCGGCTATCGTCACAATGCAGCTGGAGGTC
GCGCAGCGCATCTGCGCGCGGCCGAACACCAAGGATTATGGCACGCTGAG
CGTGGCGTTCCAGCTGTACGCCCGCCCGAGCATCCTCTTCAAGATCCCCA
ACACCGTCTTCTACCCGCAGCCCAAGGTAACCTCAGCCCTCCTCGGGCTG
GACTTCACCGGACGTGGCCCGAACATTGACCCGCGCTCCCTGCGGCTCGT
GCTGGGCACCGCCTTCCAGCAACGGCGCAAGATGCTGCGGCAGAGCCTCC
GCGGCGTTGTGCCCGCCGGGCGGGAGTTACCGGCGGAGTTCGCTGCGCGA
CGGCCAGAGCAGCTGACGCCCGACGAGTTTGTCGAGCTGACGGCCCGACT
ATTCGGG
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