mRNA_P-wetherbeei_contig8472.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8472.4.1 vs. uniprot
Match: A0A836CJ99_9STRA (BRO1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ99_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.170e-43 Identity = 93/210 (44.29%), Postives = 117/210 (55.71%), Query Frame = 1
Query: 16 YAEAGMRLRTAAGAFQRLHREELPRWIGETAKSVRPPEATEGICEGLVYFLLAEAQQMAVGKALAGSAGAGKAPPPPTLLAKLCLGVAAQLESCVGTMRSKGGMGYSNLDPTFLVHVTLVSEVYRAMAYRFLAIHAWSQDRFGTGVALMREAVKHLSERRDITSVGVPKLEAGGPLTSLAPALQTLRREFQQLQSNYLADNNKVYYDPVP 645
YA AG LRTAAG EELPRW+GETAK RPPEA G+CE L LA+AQQMA+GKALAG GK PP TLLAKLC GVA Q+++ + T+R K G Y+ L L H + + RA+A+ FLA HAW+++ +G +A R L+ +L A LR E ++Y DN +YYDPVP
Sbjct: 162 YAAAGRELRTAAGVLAHTASEELPRWVGETAKGERPPEAVPGVCEALSTLCLAQAQQMALGKALAG----GKTPP--TLLAKLCGGVADQMDAALSTLRDKAGAAYAKLAKPLLAHAAFQAALQRALAHLFLASHAWAREAYGAAIAHQRRGAALLARLXXXXXXXXXELAA-------------LRAEAAAALASYERDNGAIYYDPVP 352
BLAST of mRNA_P-wetherbeei_contig8472.4.1 vs. uniprot
Match: W7TMG3_9STRA (BRO1 domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMG3_9STRA) HSP 1 Score: 132 bits (331), Expect = 6.860e-33 Identity = 82/225 (36.44%), Postives = 122/225 (54.22%), Query Frame = 1
Query: 4 SGDRYAEAGMRLRTAAGAFQRLHREELPRWIGETAKSV--RPPEATEGICEGLVYFLLAEAQQMAVGKALAGSAGAGKAPPPPTLLAKLCLGVAAQLESCVGTMRSKGGMGYSNLDPTFLVHVTLVSEVYRAMAYRFLAIHAWSQDRFGTGVALMREAVKHLSERRDITSVGVPKLEAGGPLTSLAPALQTLRREFQQLQSNYLADNNKVYYDPVPATADLDPLP 672
S DRYAEA L++A G F L + LPRW ET + R PE +EG+ LV + A+AQ M V K G PP LAKL + V + E C+ +++ + +DP FL ++ + +YRA+AYRFLAI W ++ GT + L+ +A L RRD S G+ +E L++ P L+ LRRE + +++ DN+ +Y+ + +A L PLP
Sbjct: 157 SADRYAEAATLLKSAGGVFLALAHDFLPRWK-ETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAK------GVFAQTVPPGTLAKLSVTVMDRFEKCISNFKARASAHLARVDPDFLSYLIFMPALYRALAYRFLAIAHWEKEDHGTAIGLLLQAEIILKARRDGVSSGLSGIEESRFLSAFKPQLEILRREVSSMLTSWKRDNSTIYFAGIVDSASLPPLP 374
BLAST of mRNA_P-wetherbeei_contig8472.4.1 vs. uniprot
Match: D7FU11_ECTSI (BRO1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU11_ECTSI) HSP 1 Score: 124 bits (311), Expect = 5.000e-30 Identity = 70/124 (56.45%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 1 SSGDRYAEAGMRLRTAAGAFQRLHREELPRWIGETAKSVRPPEATEGICEGLVYFLLAEAQQMAVGKALAGSAGAGKAPPPPTLLAKLCLGVAAQLESCVGTMRSKGGMG-YSNLDPTFLVHVT 369
S G ++ EAG LR AAG F+RLH+ ELPRW+G+T+++ R EA GICEGLV+F LAEAQQMA+GKAL AGK P TLLA+LC GV QLE V MR G Y LD FLVH++
Sbjct: 153 SQGSKFTEAGEHLRKAAGIFERLHKAELPRWVGDTSEAPRLVEAEPGICEGLVHFCLAEAQQMAIGKALV----AGKTPK--TLLARLCEGVRGQLEEAVSAMRKGGSSSAYHKLDSPFLVHIS 270
BLAST of mRNA_P-wetherbeei_contig8472.4.1 vs. uniprot
Match: A0A6S8W104_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8W104_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.000e-27 Identity = 71/211 (33.65%), Postives = 111/211 (52.61%), Query Frame = 1
Query: 25 AGMRLRTAAGAFQRLHREELPRWIGETAK---SVRPPEATEGICEGLVYFLLAEAQQMAVGKALAGSAGAGKAPPPPTLLAKLCLGVAAQLESCVGTMRSKGGMGYSNLDPTFLVHVTLVSEVYRAMAYRFLAIHAWS-QDRFGTGVALMREAVKHLSERRDITSVGVPKLEAGGPLTSLAPALQTLRREFQQLQSNYLADNNKVYYDPVP 645
AG L+ AAG + L ++LP+WI P EA+ GIC+ LA QQMA+ L P TL+AKLCLGVA LE+ V T+RSK + +DP F +T ++ A+ F A W +D++G + ++ EA+ ++ RR++TS G+P++ + PL +L+ L +R + + DN+ VY++ VP
Sbjct: 166 AGRELKKAAGIMKFLAEDQLPKWISRGTNVEDKELPVEASVGICDSFKTLFLAVGQQMAIATVLVKPGI-----PNYTLVAKLCLGVAENLETFVNTIRSKAALQKEKIDPNFFTLITFQIGLHNALCLYFGARGIWEGKDKYGIAIVMLSEAIAAMATRRNVTSKGLPEISSKSPLKALSDDLTDMRAHMALVLREWEKDNSMVYFEAVP 371
BLAST of mRNA_P-wetherbeei_contig8472.4.1 vs. uniprot
Match: A0A4D9CXS2_9STRA (BRO1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXS2_9STRA) HSP 1 Score: 118 bits (296), Expect = 4.770e-27 Identity = 75/197 (38.07%), Postives = 107/197 (54.31%), Query Frame = 1
Query: 4 SGDRYAEAGMRLRTAAGAFQRLHREELPRWIGETAKSV--RPPEATEGICEGLVYFLLAEAQQMAVGKALAGSAGAGKAPPPPTLLAKLCLGVAAQLESCVGTMRSKGGMGYSNLDPTFLVHVTLVSEVYRAMAYRFLAIHAWSQDRFGTGVALMREAVKHLSERRDITSVGVPKLEAGGPLTSLAPALQTLRREFQ 588
S DRYAEA L++A G F L + LPRW ET + R PE +EG+ LV + A+AQ M V K G PP LAKL + V + E C+ +++ + +DP FL ++T + +YRA+AYRFLAI W ++ GT + L+ +A L RRD S G+ +E L++ P L+ LRRE +
Sbjct: 157 SADRYAEAATLLKSAGGVFLALAHDFLPRWK-ETPDNAAGRHPETSEGVAMALVDLVSAQAQAMYVAK------GVFAQTVPPGTLAKLSVTVMDRFEKCISNFKARASAHLARVDPDFLRYMTFMPALYRALAYRFLAIAHWEKEDHGTAIGLLLQAEIMLKARRDGVSSGLSGIEESRFLSAFKPQLEILRRELR 346
BLAST of mRNA_P-wetherbeei_contig8472.4.1 vs. uniprot
Match: A0A7R9WGJ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGJ5_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.050e-24 Identity = 74/221 (33.48%), Postives = 109/221 (49.32%), Query Frame = 1
Query: 1 SSGDRYAEAGMRLRTAAGAFQRLHREELPRWIGETAK---SVRPPEATEGICEGLVYFLLAEAQQMAVGKALA--GSAGAGKAPPPPTLLAKLCLGVAAQLESCVGTMRSKGGMGYSNLDPTFLVHVTLVSEVYRAMAYRFLAIHAWSQDR-FGTGVALMREAVKHLSERRDITSVGVPKLEAGGPLTSLAPALQTLRREFQQLQSNYLADNNKVYYDPVP 645
S+ +A A + +AG Q L ++LP+WI + P E T G+C+ LA AQQMAV L G+ G LLAKLCLGVA QLE + MRSK + +DP F V + R ++ F + W + +G + L+ EA +L ER T+ G+P L PL +L+ + +R +QL ++ DN+ VY++ VP
Sbjct: 158 STNGNFAAASRGFKQSAGVMQFLAEDQLPKWIARGSNVDDKDLPSEITVGVCDAFKALFLAVAQQMAVATVLVKPGTPNWG-------LLAKLCLGVAEQLELFMSNMRSKASVQMPKIDPNFFTLVAFQVSMQRGLSLYFQSRSIWESNAGYGLAICLLNEATTYLLERDSETNRGLPDLGPKSPLRALSKDVTFMRAHMRQLLKSWEKDNSLVYFEKVP 371
BLAST of mRNA_P-wetherbeei_contig8472.4.1 vs. uniprot
Match: A0A7S4I7Q1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I7Q1_9STRA) HSP 1 Score: 106 bits (264), Expect = 6.060e-23 Identity = 73/221 (33.03%), Postives = 106/221 (47.96%), Query Frame = 1
Query: 1 SSGDRYAEAGMRLRTAAGAFQRLHREELPRWIGETAK---SVRPPEATEGICEGLVYFLLAEAQQMAVGKALA--GSAGAGKAPPPPTLLAKLCLGVAAQLESCVGTMRSKGGMGYSNLDPTFLVHVTLVSEVYRAMAYRFLAIHAW-SQDRFGTGVALMREAVKHLSERRDITSVGVPKLEAGGPLTSLAPALQTLRREFQQLQSNYLADNNKVYYDPVP 645
S+ +A + + A+G + L ++LP+WI + P E T G+CE LA AQQMAV L G+ G LLAKLCLGVA QLE MRSK +DP F VT + R ++ F + + W S +G + L+ EA +L R TS G+P + L +L+ + +R + L ++ DN+ VY+D VP
Sbjct: 158 STNGNFAASSRGFKQASGVMEFLAEDQLPKWIARGSNVEDKDLPSEVTVGVCEAFKVLFLAIAQQMAVATVLVKPGTPNWG-------LLAKLCLGVAEQLELFTSNMRSKASNQMPKIDPNFFTLVTFQVNIQRGLSLYFQSRNIWDSNSGYGLAICLLNEASSYLQTRDSPTSRGLPDVGPKSVLRALSSDVTDMRGHMRLLLKSWEKDNSLVYFDKVP 371
BLAST of mRNA_P-wetherbeei_contig8472.4.1 vs. uniprot
Match: A0A7S2ICI9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ICI9_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.240e-22 Identity = 65/211 (30.81%), Postives = 104/211 (49.29%), Query Frame = 1
Query: 25 AGMRLRTAAGAFQRLHREELPRWIGETAK---SVRPPEATEGICEGLVYFLLAEAQQMAVGKALAGSAGAGKAPPPPTLLAKLCLGVAAQLESCVGTMRSKGGMGYSNLDPTFLVHVTLVSEVYRAMAYRFLAIHAWS-QDRFGTGVALMREAVKHLSERRDITSVGVPKLEAGGPLTSLAPALQTLRREFQQLQSNYLADNNKVYYDPVP 645
AG + AAG Q L ++LP+WI K P EA+ G C+ LA QQMA+ L P TL+ KLCLGVA LE+ V T RSK + +D F + + +++ F A W +D++G + ++ EA+ + RR TS G+P+++A PL +++ + ++ + + DN+ VY++ VP
Sbjct: 166 AGREFKVAAGMMQFLAEDQLPKWISRGTKVEDKNLPAEASVGTCDAFKTLFLAVGQQMAIATVLVKPGV-----PNYTLVGKLCLGVADNLETFVSTFRSKAALQRHKIDSNFFTLIAFQIALQKSLCLYFGARGIWEGKDKYGVAICMLSEAIAGMQTRRTPTSKGLPEIDAKSPLKAISKDIVAMQGHMALVLREWEKDNSTVYFEGVP 371
BLAST of mRNA_P-wetherbeei_contig8472.4.1 vs. uniprot
Match: A0A7R9WV67_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WV67_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.790e-21 Identity = 64/214 (29.91%), Postives = 104/214 (48.60%), Query Frame = 1
Query: 16 YAEAGMRLRTAAGAFQRLHREELPRWIGETAK---SVRPPEATEGICEGLVYFLLAEAQQMAVGKALAGSAGAGKAPPPPTLLAKLCLGVAAQLESCVGTMRSKGGMGYSNLDPTFLVHVTLVSEVYRAMAYRFLAIHAWSQD-RFGTGVALMREAVKHLSERRDITSVGVPKLEAGGPLTSLAPALQTLRREFQQLQSNYLADNNKVYYDPVP 645
+A A AAG F L +++LP+WI +K P E + GI L A QQMAV L S P +L+AKLC G+A QLE+ V +R + +D F +T ++++R+++ F A W Q +GT +A++ +A++ + R G+P + L L ++ LR ++L + DN+ VY++ VP
Sbjct: 28 FAIASREYAAAAGIFDFLSKDQLPKWISRGSKIDADQLPIECSLGIASALKILFQANGQQMAVATVLIKSGT-----PNYSLVAKLCFGIAEQLEAFVAAVREDSFKQMARMDKDFFTLITFQTQIHRSLSQYFHARSLWEQQGEYGTAIAILHDAMEAIQVRSSAAGKGIPDANSTRALIPLGADIKKLREHMKKLLRYWEKDNSSVYFERVP 236
BLAST of mRNA_P-wetherbeei_contig8472.4.1 vs. uniprot
Match: B7FR41_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FR41_PHATC) HSP 1 Score: 94.0 bits (232), Expect = 9.380e-19 Identity = 66/213 (30.99%), Postives = 99/213 (46.48%), Query Frame = 1
Query: 16 YAEAGMRLRTAAGAFQRLHREELPRWIGETAKSVR---PPEATEGICEGLVYFLLAEAQQMAVGKALAGSAGAGKAPPPPTLLAKLCLGVAAQLESCVGTMRSKGGMGYSNLDPTFLVHVTLVSEVYRAMAYRFLAIHAWSQDRFGTGVALMREAVKHLSERRDITSVGVPKLEAGGPLTSLAPALQTLRREFQQLQSNYLADNNKVYYDPVP 645
+A A AAG F L ++ LP+WI + +K + P E + + L +A QQMAV L GK P LLAKLCLG+ QLE + +R S +DP F +T + R+++ F A W +D G VA++ E+ R S GVP + L L L+ +R L ++ DN++V+++ VP
Sbjct: 165 FAAASRDYAAAAGIFDFLAQDHLPKWIAKGSKVSQDDLPSECHAPLAKALKTLFMANGQQMAVATVLIKP---GK--PNYGLLAKLCLGITEQLEDFINMLRKDAFPQMSRMDPDFFTLITFQINIQRSLSLYFQARSLWEKDDHGIAVAILSESTVAARTRESTASDGVPDVTRTPALYPLQDDLKDMRSHMATLLHSWEKDNSQVFFESVP 372 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8472.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8472.4.1 >prot_P-wetherbeei_contig8472.4.1 ID=prot_P-wetherbeei_contig8472.4.1|Name=mRNA_P-wetherbeei_contig8472.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=214bp MRLRTAAGAFQRLHREELPRWIGETAKSVRPPEATEGICEGLVYFLLAEAback to top mRNA from alignment at P-wetherbeei_contig8472:1687..2755- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8472.4.1 ID=mRNA_P-wetherbeei_contig8472.4.1|Name=mRNA_P-wetherbeei_contig8472.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1069bp|location=Sequence derived from alignment at P-wetherbeei_contig8472:1687..2755- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8472:1687..2755- >mRNA_P-wetherbeei_contig8472.4.1 ID=mRNA_P-wetherbeei_contig8472.4.1|Name=mRNA_P-wetherbeei_contig8472.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=642bp|location=Sequence derived from alignment at P-wetherbeei_contig8472:1687..2755- (Phaeothamnion wetherbeei SAG_119_79)back to top |