mRNA_P-wetherbeei_contig847.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig847.3.1
Unique NamemRNA_P-wetherbeei_contig847.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig847.3.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 7.120e-72
Identity = 175/476 (36.76%), Postives = 249/476 (52.31%), Query Frame = 3
Query:  294 GEDVLPADVFVAAVVDQGKIIVNACLQCGLTVIECNAHRLNSAVSWAPGEAGTPNTIKHPAMKKFLNKHAVQIGVFSHAPANNDNLKSIQRELAGCDTGRDEADVFELIRRNDTRWNGNHAMLDRTLRLEAPIKRYFSVFNPGSARCLTNTEWALTREVVGVLNPVLQVQTGIQGGENGFLSDVIYRTRELREVASPEDDKFEVRPARY--------GDANESKYKILLQEDTSLMIDILAQQMGDRRLGMADREIERLAILLDPRRKK------ESGCIPAEALGMAEGELLRAFKAMHGDGGAGGQP---PTMLQPPRGTTDGQPPAKKVKMSALERRRAEHNAGIAQRRDAADGVGADNAA-------DDEVGRYLRQELEMDVSSFSLFGYWREKSCPKLDGVSGEVLAKAEFPKLARLAALYLCVEGTS*QAEHNFSALAHLMDDRRSRLVPWTIERCMLLRLNRDKIASI 1649
            GE V P+DVF+A  VDQGK I+NAC   G+TV+ECN HRLN+AV WA G AG      +PAM   + K A  +GVFSH+  NND LK +QR   G         ++EL+RRNDTRW     M+DR L L+ PI  YF  + P + R LT  EW +T EV  +L+ V +V   +QG  +  +   ++   EL E+    +D   +R            G   +    + L  +   ++++L ++M ++ +G A   +ERL+ L+DPRRK       E+G   A+    AE +L +A  A    G A   P   P M   P      +P  KK K+S LE RRA   A      D    +   + +       + EV  YL +  ++DV  F++ GYW  +    +   +G+V + AE P LA +A LYL +E TS QAE NFSALAHL+   R  ++P  +ER M +RLNR  +A +
Sbjct:  353 GESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSR------IYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKY-PQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLG--EDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGS--ADLRKKAEDDL-KAVIAKFDVGPATAAPAPAPVMNLDPV-----EPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEV 809          
BLAST of mRNA_P-wetherbeei_contig847.3.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 3.270e-71
Identity = 182/503 (36.18%), Postives = 262/503 (52.09%), Query Frame = 3
Query:  294 GEDVLPADVFVAAVVDQGKIIVNACLQCGLTVIECNAHRLNSAVSWAPGEAGTPNTIKHPAMKKFLNKHAVQIGVFSHAPANNDNLKSIQRELAGCDTGRDEADVFELIRRNDTRWNGNHAMLDRTLRLEAPIKRYFSVFNPGSARCLTNTEWALTREVVGVLNPVLQVQTGIQGGENGFLSDVIYRTRELREVASPEDDKFEVRPARYGDANESKYKILLQE---DTSLMIDILAQQMGDRRLGMADREIERLAILLDPRRKKES------GCIPAEALGMAEGELLRAFKAMHGDGGAGGQPPTMLQPPRGTTDGQPPAKKVK-MSALERRRAEHNAGIAQRRDAADGVGADNAA---------DDEVGRYLRQELEMDVSSFSLFGYWREKSCPKLDGVSGEVLAKAEFPKLARLAALYLCVEGTS*QAEHNFSALAHLMDDRRSRLVPWTIERCMLLRLNRDKIASIGKVLDMRQKSKQQAADVVKAVAQAHAGIGGKA 1745
            GE+V P DVF+A  VDQG  +VNAC    + V++CNAHRLNS   WA G  G+  T ++PAM+K + + A  +GVFSH+  NND LK IQR             ++ELIRRNDTRW   HAM+ R L+L+  I  YF   N  + R L++ EW +T EV  +L+ V +V   IQG  +  +S  ++  RE+RE+ S +  K  V    Y D +  K KI + +   +T  + +++  +M  + LG A   +ER+  LLDPRRK  S      G    +A  +A+ + +    A   D G+                 QP  KK K +S LE RR +    +A+ + A+ G  A  A          + E+  YL ++   +   FSL  +W+ +S P+    +GEV  +   P LA +A L+  +E TS QAE NFSALA L+   RS ++P  +ER M LRLNR  I  +  + D  + +K  AA   + VAQ  A   G A
Sbjct:   13 GENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQI------IYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRD-NENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTFA-EADLGSASSXXXXXXXXXXXXXNQPAPKKQKVLSDLEERRLQR---LAKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEV--EPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAARCQEKVAQVEAEAAGDA 502          
BLAST of mRNA_P-wetherbeei_contig847.3.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 1.640e-70
Identity = 170/473 (35.94%), Postives = 245/473 (51.80%), Query Frame = 3
Query:  294 GEDVLPADVFVAAVVDQGKIIVNACLQCGLTVIECNAHRLNSAVSWAPGEAGTPNTIKHPAMKKFLNKHAVQIGVFSHAPANNDNLKSIQRELAGCDTGRDEADVFELIRRNDTRWNGNHAMLDRTLRLEAPIKRYFSVFNPGSARCLTNTEWALTREVVGVLNPVLQVQTGIQGGENGFLSDVIYRTRELREVASPEDDKFEVRPARY--------GDANESKYKILLQEDTSLMIDILAQQMGDRRLGMADREIERLAILLDPRRKK------ESGCIPAEALGMAEGELLRAFKAMHGDGGAGGQPPTMLQPPRGTTDGQPPAKKVKMSALERRRAEHNAGIAQRRDAADGVGADNAA-------DDEVGRYLRQELEMDVSSFSLFGYWREKSCPKLDGVSGEVLAKAEFPKLARLAALYLCVEGTS*QAEHNFSALAHLMDDRRSRLVPWTIERCMLLRLNRDKIASI 1649
            GE V P+DVF+A  VDQGK I+NAC   G+TV+ECN HRLN+AV WA G AG      +PAM   + K A  +GVFSH+  NND LK +QR   G         ++EL+R NDTRW     M+DR L L+ PI  YF  + P + R LT  EW +T EV  +L+ V +V   +QG  +  +   ++   EL E+    +D   +R            G   +    + L  +   ++++L ++M ++ +G A   +ERL+ L+DPR +       E+G   A+    AE +L +A  A    G A   P     P       +P  KK K+S LE RRA   A      D    +   + +       + EV  YL +  ++DV  F++ GYW  +    +   +G+V + AE P LA +A LYL +E TS QAE NFSALAHL+   R  ++P  +ER M +RLNR  +A +
Sbjct:  158 GESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSR------IYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKY-PQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLG--EDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGS--ADLRKKAEDDL-KAVIAKFDVGPATAAPAPA--PVMNLDRVEPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEV 614          
BLAST of mRNA_P-wetherbeei_contig847.3.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 2.040e-68
Identity = 182/503 (36.18%), Postives = 262/503 (52.09%), Query Frame = 3
Query:  294 GEDVLPADVFVAAVVDQGKIIVNACLQCGLTVIECNAHRLNSAVSWAPGEAGTPNTIKHPAMKKFLNKHAVQIGVFSHAPANNDNLKSIQRELAGCDTGRDEADVFELIRRNDTRWNGNHAMLDRTLRLEAPIKRYFSVFNPGSARCLTNTEWALTREVVGVLNPVLQVQTGIQGGENGFLSDVIYRTRELREVASPEDDKFEVRPARYGDANESKYKILLQE---DTSLMIDILAQQMGDRRLGMADREIERLAILLDPRRKKES------GCIPAEALGMAEGELLRAFKAMHGDGGAGGQPPTMLQPPRGTTDGQPPAKKVK-MSALERRRAEHNAGIAQRRDAADGVGADNAA---------DDEVGRYLRQELEMDVSSFSLFGYWREKSCPKLDGVSGEVLAKAEFPKLARLAALYLCVEGTS*QAEHNFSALAHLMDDRRSRLVPWTIERCMLLRLNRDKIASIGKVLDMRQKSKQQAADVVKAVAQAHAGIGGKA 1745
            GE+V P DVF+A  VDQG  +VNAC    + V++CNAHRLNS   WA G  G+  T ++PAM+K + + A  +GVFSH+  NND LK IQR             ++ELIRRNDTRW   HAM+ R L+L+  I  YF   N  + R L++ EW +T EV  +L+ V +V   IQG  +  +S  ++  RE+RE+ S +  K  V    Y D +  K KI + +   +T  + +++  +M  + LG A   +ER+  LLDPRRK  S      G    +A  +A+ + +    A   D G+                 QP  KK K +S LE RR +    +A+ + A+ G  A  A          + E+  YL ++   +   FSL  +W+ +S P+    +GEV  +   P LA +A L+  +E TS QAE NFSALA L+   RS ++P  +ER M LRLNR  I  +  + D  + +K  AA   + VAQ  A   G A
Sbjct:  341 GENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQI------IYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRD-NENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTFA-EADLGSASSXXXXXXXXXXXXXNQPAPKKQKVLSDLEERRLQR---LAKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEV--EPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAARCQEKVAQVEAEAAGDA 830          
BLAST of mRNA_P-wetherbeei_contig847.3.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 9.340e-66
Identity = 162/456 (35.53%), Postives = 243/456 (53.29%), Query Frame = 3
Query:  294 GEDVLPADVFVAAVVDQGKIIVNACLQCGLTVIECNAHRLNSAVSWAPGEAGTPNTIKHPAMKKFLNKHAVQIGVFSHAPANNDNLKSIQRELAGCDTGRDEADVFELIRRNDTRWNGNHAMLDRTLRLEAPIKRYFSVFNPGSARCLTNTEWALTREVVGVLNPVLQVQTGIQGGENGFLSDVIYRTRELREVASPEDDKFEVRPARYGDANESKYKILLQEDTSL--MIDILAQQMGDRRLGMADREIERLAILLDPRRKKESGCIPAEALGMAEGELLRAFKAMHGDGGAGGQPPTMLQPPRGTTDG-QPPAKKVKMSALERRRAEHNAGIAQRRDAADGVGADNAADD-------EVGRYLRQELEMDVSSFSLFGYWREKSCPKLDGVSGEVLAKAEFPKLARLAALYLCVEGTS*QAEHNFSALAHLMDDRRSRLVPWTIERCMLLRLNR 1631
            GEDV P DVF+A  VDQG  +VNAC   G+ V++CN HR+N+AV WA G AG  N  ++  M   + K A  +GVFSH+  NND LK +QR         D   V++LIRRNDTRW     M+DR L L+ PI  YF    P ++R LT  EW +T EV  +L+ V +V   +QG ++  +S  ++   E+ E+   +       P R  +A E +   +L+  ++   ++++L   M ++++G A +++ERL+ L+DPRRK   G            +     KA+          P     P    D  +P +K+ K+S LE RRA   A  A    A+  V A  +A +       EV  YL +  +++V  F++ G+W  +    +   +G V + AE P LA +A L+L +E +S QAE NFSAL+HL+   R  ++   +ER ML+RLNR
Sbjct:  351 GEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAG--NGRRNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQR------LEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFRE-QPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSH-----PIRAQNATEPEEMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNVDPVEPASKRKKLSRLEERRAARVA-AASDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNR 791          
BLAST of mRNA_P-wetherbeei_contig847.3.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 1.500e-59
Identity = 161/468 (34.40%), Postives = 223/468 (47.65%), Query Frame = 3
Query:  294 GEDVLPADVFVAAVVDQGKIIVNACLQCGLTVIECNAHRLNSAVSWAPGEAGTPNTIKHPAMKKFLNKHAVQIGVFSHAPANNDNLKSIQRELAGCDTGRDEADVFELIRRNDTRWNGNHAMLDRTLRLEAPIKRYFSVF------NPGSARCLTNTEWALTREVVGVLNPVLQVQTGIQGGENGFLSDVIYRTRELREVASPEDDKFEVRPARYGDANESKYKILLQEDTSLMIDILAQQMGDRRLGMADREIERLAILLDPRRKKESGCIPAEALGMAEGELLRAFKAMHGDGGAGGQPPTMLQPPRGTTDGQPPAKKVKM--SALERRRAEHNAGIAQRRDAADGVGADNAA--------DDEVGRYLRQELEMDVSSFSLFGYWREKSCPKLDGVSGEVLAKAEFPKLARLAALYLCVEGTS*QAEHNFSALAHLMDDRRSRLVPWTIERCMLLRLNRDKIASI 1649
            G  V   DVF+A  VDQGK +VNAC   G+ V+ECN HR+NSAV WA G AG+  T K+  MKK     A  +GVFSH+  NND LK +QR  A      D   ++E IRRNDTRW     M+ R L L+ PI  YF         N    R LT  EW +T EV  +L  V +V   +QG     LS   +    + E     +   +      G + E      L  +   ++ +L + M ++ +G A + +ERL++LLDPRRK              + +     KA  G       P T    P    D   PA+K K   S LE                  G     AA        + E+  YL ++ ++DV  F+L G+W  +    +   +G+V + AE P LA +A L+L +E TS QAE NFSALAHL+ D    ++   +ER ML+RLN+  +A +
Sbjct:  162 GGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATTCKNKPMKKL----AALVGVFSHSAVNNDMLKELQRLEA------DLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFI---INEGEGQNESSLD------GISTEETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFTGKFAQESAPSTPAPAPVVNVDTAEPARKKKXPTSRLEXXXXXXXXXXXXXXXXXXGTTDPQAAGTGRRVLIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEV 610          
BLAST of mRNA_P-wetherbeei_contig847.3.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 7.400e-54
Identity = 165/495 (33.33%), Postives = 241/495 (48.69%), Query Frame = 3
Query:  294 GEDVLPADVFVAAVVDQGKIIVNACLQCGLTVIECNAHRLNSAVSWAPGEAGTPNTIKHPAMKKFLNKHAVQIGVFSHAPANNDNLKSIQRELAGCDTGRDEADVFELIRRNDTRWNGNHAMLDRTLRLEAPIKRYFSVF-----NPGSARCLTNTEWALTREVVGVLNPVLQVQTGIQGGENGFLSDVIYRTRELREVASPED----------------------DKFEVRPARYGDANESKYKILLQEDTSLMIDILAQQMGDRRLGMADREIERLAILLDPRRKKESGCIPAEALGMAEGELLRA----FKAMHGDGGAGGQPPTMLQPPRGTTDGQP--PA-KKVKMSALERRRAEHNAG---------IAQRRDAADGVGADNAADDEVGRYLRQELEMDVSSFSLFGYWREKSCPKLDGVSGEVLAKAEFPKLARLAALYLCVEGTS*QAEHNFSALAHLMDDRRSRLVPWTIERCMLLRLNRDKIASI 1649
            GE V P+DVF+A  VDQG  +VNAC   G+ V++CN HR+NSAV WA G AG+  T ++  M   + K A  +GVFS +  NN  LK +QR     D  R    ++EL+RRNDT       M+ R L L+ PI  YF        N    R L++ EW +T EV  +L  V ++   IQG ++  +S  ++   E+ E+   E                       ++ E +P + G + E  +   L  +   +  +L + M ++ +G A + +ERL+ LLDPRRK     + A  +G  + +L  A     K       A   PPT    P    D QP  PA KK K S +E                  +A +       G     + EV  YL ++ ++DV  F+L G+W  +    +   +G+V A AE P LA +A L+L +E TS QAE NFSALAHL+   R  ++   +ER ML+RLNR  +A +
Sbjct:   17 GESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGGLMKKLAALVGVFSPSAVNN-MLKELQR--LETDLHR----IYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKD----LDATQVGNGDEDLRIAAEADLKKFIATFTAESVPPTPAPAP--VVDVQPAEPALKKKKFSRIEEXXXXXXXXXXXXXXXXTVAPQTPV---TGRHVLIEREVLVYLAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLLAEV 492          
BLAST of mRNA_P-wetherbeei_contig847.3.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 1.030e-51
Identity = 154/467 (32.98%), Postives = 213/467 (45.61%), Query Frame = 3
Query:  294 GEDVLPADVFVAAVVDQGKIIVNACLQCGLTVIECNAHRLNSAVSWAPGEAGTPNTIKHPAMKKFLNKHAVQIGVFSHAPANNDNLKSIQRELAGCDTGRDEADVFELIRRNDTRWNGNHAMLDRTLRLEAPIKRYFSVF------NPGSARCLTNTEWALTREVVGVLNPVLQVQTGIQGGENGFLSDVIYRTRELRE--------------VASPEDDKFEVRPARYGDANESKYKILLQEDTSL---------MIDILAQQMGDRRLGMADREIERLAILLDPRRKKESGCIPAEALGMAEGELLRAFKAMHGDGGAGGQPPTMLQPPRGTTDGQPPAKK--VKMSALERRRAEHNAGIAQRRDA--------ADGVGADNAADDEVGRYLRQELEMDVSSFSLFGYWREKSCPKLDGVSGEVLAKAEFPKLARLAALYLCVEGTS*QAEHNFSALAHLMDDRR 1577
            G  V   DVF+A  VDQGK +VNAC   G+ V+ECN HR+NSAV WA G AG+  T K+  MKK     A  +GVFSH+  NND LK +QR  A      D   ++E IRRNDTRW     M+ R L L+ PI  YF         N    R LT  EW +T EV  +L  V +V   +QG  +  LS   +   E+ +              + +P      + P      NES    +   +T +         ++ +L + M ++ +G A + +ERL++LLDPRRK              + +     KA  G       P T    P    D   PA+K     S L                         A G G     + E+  YL ++ ++DV  F+  G+W  +    +   +G+V + AE P LA +A L+L +E TS QAE NFSALAHL+ D R
Sbjct:  162 GGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTTCKNKPMKKL----AALVGVFSHSAVNNDMLKELQRLEA------DLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRVESAIVTPPPPAAGIIPTEGEGQNESSLDGISTAETQVTDLTLEAQDVVQVLLEVMDEKGVGKALQWVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFIGKFAQESAPSTPAPAPVVNVDTAEPARKKXXXTSRLXXXXXXXXXXXXXXXXXXXXXTDPKAAGAGRRVLIEREMLVYLAEQPQVDVDDFNPLGFWNRRGTDSVSAATGKVSSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLR 618          
BLAST of mRNA_P-wetherbeei_contig847.3.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 7.010e-47
Identity = 145/468 (30.98%), Postives = 209/468 (44.66%), Query Frame = 3
Query:  294 GEDVLPADVFVAAVVDQGKIIVNACLQCGLTVIECNAHRLNSAVSWAPGEAGTPNTIKHPAMKKFLNKHAVQIGVFSHAPANNDNLKSIQRELAGCDTGRDEADVFELIRRNDTRW-NGNHAMLDRTLRLEAPIKRYFSVFNPGSARCLTNTEWALTREVVGVLNPVLQVQTGIQGGENGFLSDVIYRTRELREVASPEDDKFEVRPARY--------GDANESKYKILLQEDTSLMIDILAQQMGDRRLGMADREIERLAILLDPRRKK------ESGCIPAEALGMAEGELLRAFKAMH-GDGGAGGQPPTMLQPPRGTTDGQPPAKKVKMSALERRRAEHNAGIAQRRDAADGVGADNAADDEVGRYLRQELEMDVSSFSLFGYWREKSCPKLDGVSGEVLAKAEFPKLARLAALYLCVEGTS*QAEHNFSALAHLMDDRRSRLVPWTIERCMLLRLNRDKIASI 1649
            GE V+P++ F+A  VDQGK I+NAC    +TV+ECN HR+N+AV WA G A      K+P M   + K A  +GVFSH+  NND LK +QR   G         ++EL+RRNDTRW      M+DR L L+ PI  +F  + P + R LT  EW +  EV  +L  V ++   +QG  +  +   ++   E+ E+    +D   +R            G   +      L  +   ++++L   M  + +G A    ERL+ L+DPRRK       E+G   A+    AE +L         G        P            +P  K+  +S LER                                         SS S                +G+V + AE P LA +A LYL +E TS QAE NFSA +HL+   R +++P   ER M +RLNR  +A +
Sbjct:    2 GESVVPSNDFLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGIAAKGR--KNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSR------IYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKY-PQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLG--EDTHPIRQPNATVVPVPEEGIPTDDTPVTDLTAEAPCVLEVLLDVMRKKGVGSAQVAAERLSALMDPRRKLLGSDQLENGS--ADLSKKAEDDLKAVIAKFDVGPSTESTAAPXXXXXXXXXXPAEPAPKRKTVSRLER---------------------------------------GTSSVS--------------PTTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSARSHLIGQLRCKILPSKFERTMFIRLNRHLVAEV 403          
BLAST of mRNA_P-wetherbeei_contig847.3.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.080e-25
Identity = 87/258 (33.72%), Postives = 120/258 (46.51%), Query Frame = 3
Query:  294 GEDVLPADVFVAAVVDQGKIIVNACLQCGLTVIECNAHRLNSAVSWAPGEAGTPNTIKHPAMKKFLNKHAVQIGVFSHAPANNDNLKSIQRELAGCDTGRDEADVFELIRRNDTRWNGNHAMLDRTLRLEAPIKRYFSVF---NPGSA---RCLTNTEWALTREVVGVLNPVLQVQTGIQGGENGFLSDVIYRTRELREVASPEDDKFEVRPARYGDANESKYKILLQEDT----SLMIDILAQQMGDRRLGMADREI 1037
            G  V P DVF+   VDQGK IVNA    G+ V+ECN HR+NSAV WA G AG   T K+  M   + K A  +GVFSH+  NND LK IQR          EAD+  +       W     M+ R L L   I  YF      NP      R LT  EW +T EV  +L+ V +    +QG  +  +S   +   E+ E+   +     V  A      ++   IL +E+     + ++DI  +   D + G+  R +
Sbjct:  159 GPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCARTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQRL---------EADLHRVYE-----WTSQFRMMVRLLILNKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMEMLKEDSHPIRVENAMVTPPPQAPGLILAEEEEQQHQASLVDISTE---DTQAGVTGRRV 399          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig847.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JGG8_9PHAE7.120e-7236.76Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5KAN7_9PHAE3.270e-7136.18Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JTB8_9PHAE1.640e-7035.94Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KJ52_9PHAE2.040e-6836.18Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JRT6_9PHAE9.340e-6635.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQI6_9PHAE1.500e-5934.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDJ6_9PHAE7.400e-5433.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZU3_9PHAE1.030e-5132.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAS2_9PHAE7.010e-4730.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXV5_9PHAE2.080e-2533.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig847contigP-wetherbeei_contig847:4795..7059 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7029.ACYPI36392-PA
PFAMsDUF659,Dimer_Tnp_hAT,zf-BED
Model size1824
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons4
Evalue0.00066
EggNOG OGsKOG1121@1|root,KOG1121@2759|Eukaryota,39TTD@33154|Opisthokonta,3BCXB@33208|Metazoa,3CYBV@33213|Bilateria,421ZD@6656|Arthropoda,3SQPW@50557|Insecta
DescriptionRNA polymerase II regulatory region DNA binding
Cds size1050
COG categoryL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig847.3.1prot_P-wetherbeei_contig847.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig847 5093..6455 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187042.1795392-UTR-P-wetherbeei_contig847:4794..50921683187042.1795392-UTR-P-wetherbeei_contig847:4794..5092Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig847 4795..5092 -
1683187042.222869-UTR-P-wetherbeei_contig847:6455..66701683187042.222869-UTR-P-wetherbeei_contig847:6455..6670Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig847 6456..6670 -
1683187042.2333875-UTR-P-wetherbeei_contig847:6798..70591683187042.2333875-UTR-P-wetherbeei_contig847:6798..7059Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig847 6799..7059 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187042.1909683-CDS-P-wetherbeei_contig847:5092..53981683187042.1909683-CDS-P-wetherbeei_contig847:5092..5398Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig847 5093..5398 -
1683187042.2012103-CDS-P-wetherbeei_contig847:5560..60831683187042.2012103-CDS-P-wetherbeei_contig847:5560..6083Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig847 5561..6083 -
1683187042.2120461-CDS-P-wetherbeei_contig847:6234..64551683187042.2120461-CDS-P-wetherbeei_contig847:6234..6455Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig847 6235..6455 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig847.3.1

>prot_P-wetherbeei_contig847.3.1 ID=prot_P-wetherbeei_contig847.3.1|Name=mRNA_P-wetherbeei_contig847.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=350bp
MKKFLNKHAVQIGVFSHAPANNDNLKSIQRELAGCDTGRDEADVFELIRR
NDTRWNGNHAMLDRTLRLEAPIKRYFSVFNPGSARCLTNTEWALTREVVG
VLNPVLQVQTGIQGGENGFLSDVIYRTRELREVASPEDDKFEVRPARYGD
ANESKYKILLQEDTSLMIDILAQQMGDRRLGMADREIERLAILLDPRRKK
ESGCIPAEALGMAEGELLRAFKAMHGDGGAGGQPPTMLQPPRGTTDGQPP
AKKVKMSALERRRAEHNAGIAQRRDAADGVGADNAADDEVGRYLRQELEM
DVSSFSLFGYWREKSCPKLDGVSGEVLAKAEFPKLARLAALYLCVEGTS*
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mRNA from alignment at P-wetherbeei_contig847:4795..7059-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig847.3.1 ID=mRNA_P-wetherbeei_contig847.3.1|Name=mRNA_P-wetherbeei_contig847.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2265bp|location=Sequence derived from alignment at P-wetherbeei_contig847:4795..7059- (Phaeothamnion wetherbeei SAG_119_79)
AAGATCCTCGACGAAGAGTAGCGGAAGCTGTTTCACACCTTGGTCGACAT CCTGCGCCGACACCAGCTGTGGCTTTCGCCTAACAAGACGCAGCCATTCT GCTGCATGCGGACCGACATGACCACAGTGCAGAATGTGGCCTACATCACC CTCACCTTCACCATCGTGAGCGAGCGCTTCCAGCTCGTGCGCATCGCAGC GGCAACAAGGTCTCTTCCGGGACACCATACAGCGGACGCTGTTGCGGAGT GGCTCCAGCTGGTCAGCAACGTTGCCTCTTTGCCGAATTCGTCATTCTTT ATTTCTTTCTAATCATGGATCCGCGGCACGGCATGCTGACAGAGTTTATT ACATTTGTGGCCGCTTTTGCCGTGTCCGCCGCATGCCAGGTCACGAAGGA GTGGTTTCAAGGCTTCATGGGGGCGAGGATGTCCTGCCTGCAGATGTCTT CGTGGCGGCCGTCGTCGACCAAGGGAAAATCATCGTGAACGCCTGCCTGC AGTGCGGCCTGACCGTCATCGAGTGCAACGCGCACCGGCTCAACTCGGCG GTCTCGTGGGCGCCTGGGGAGGCGGGCACTCCGAACACCATCAAGCATCC AGCCATGAAGAAATTCCTCAACAAGCACGCCGTCCAGATTGGCGTCTTCA GCCACGCGCCGGCTAACAACGACAACCTCAAGTCCATCCAGCGTGAGCTT GCGGGTTGCGACACGGGCCGCGACGAGGCTGACGTCTTTGAGCTGATTCG GCGCAACGATACCCGCTGGAACGGCAACCATGCCATGCTGGACAGGACGC TGCGCCTGGAAGCGCCCATCAAAAGGTTAGTGCTGGCGGTGGCTGCTGTC TTGCTGTCTTCATCATTATTCATTTGCGCCGCCTGCCTTCCTGTGCGAAT GCTGACGCCATTCTGGCTGGCTGCACTCTTCTTGCTTCCTGCTGCTTCCG GTGCGTCGCTGCGAATCTGCGTGCAGGTACTTCTCGGTTTTCAACCCGGG CAGCGCCCGCTGCCTGACCAACACGGAGTGGGCCTTGACCCGTGAGGTCG TCGGGGTGCTGAATCCAGTGCTGCAGGTCCAAACGGGCATCCAAGGCGGC GAGAACGGCTTCTTGTCGGACGTGATCTACCGGACGCGTGAGCTTCGTGA GGTGGCCAGTCCAGAAGACGACAAGTTCGAGGTCCGTCCCGCAAGGTATG GCGACGCAAATGAATCAAAATATAAGATTCTGTTGCAGGAGGACACTTCA TTGATGATCGACATCCTCGCGCAGCAGATGGGGGATAGGCGGTTGGGCAT GGCAGACCGCGAGATTGAGCGCCTTGCAATCTTGCTTGATCCGCGTCGCA AGAAAGAGTCGGGATGCATTCCAGCTGAGGCCTTGGGGATGGCCGAGGGA GAGCTGCTTCGCGCGTTCAAGGCAATGCACGGTGATGGCGGCGCCGGCGG GCAGCCACCGACAATGCTGCAGCCTCCTCGAGGCACGACGGATGGGCAGG TGCGCGAGCTTAACTAAATTGCGAACCGTTTTTGTCTCAAGGCGCTGCCT CCTCACGTCTGCTTCGTCCTTATTTAATTGTTGACTGACGTTATGCCCTC TTGTTGCCGCCGGCGGTCGGAGTTTTGCTCGTCACAACCTTGCTATGCTT ATGCCGCCCAGCCACCCGCCAAGAAGGTGAAGATGAGCGCACTGGAGAGG CGCCGAGCGGAGCATAACGCCGGAATTGCGCAGCGGCGGGATGCGGCGGA CGGTGTTGGAGCTGACAATGCTGCTGACGACGAAGTGGGCCGCTACCTCC GCCAGGAGTTAGAGATGGACGTGTCGTCATTCTCCCTTTTCGGATACTGG AGGGAGAAGAGCTGCCCAAAGCTTGATGGTGTGAGCGGGGAGGTGCTGGC AAAGGCAGAGTTTCCGAAGCTTGCTCGTCTTGCCGCTTTGTACCTTTGCG TGGAGGGAACCAGCTGACAGGCTGAGCACAACTTCAGTGCACTTGCCCAT TTGATGGATGACCGCCGGAGCCGGCTGGTCCCCTGGACAATTGAGAGGTG CATGCTTCTCCGTCTCAATCGCGACAAGATTGCCAGCATTGGCAAGGTCT TAGACATGAGGCAGAAGAGCAAGCAGCAGGCAGCCGATGTAGTCAAAGCC GTAGCGCAGGCGCACGCGGGAATTGGCGGGAAGGCGGCGGACAATCAGGT CGCCGTGGCATAGATGCCGGGCGACGGGGGGAAGAGCGGCGCGCAGGCGG CGCGCTGGAGGACCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig847:4795..7059-

>mRNA_P-wetherbeei_contig847.3.1 ID=mRNA_P-wetherbeei_contig847.3.1|Name=mRNA_P-wetherbeei_contig847.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1050bp|location=Sequence derived from alignment at P-wetherbeei_contig847:4795..7059- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGAAATTCCTCAACAAGCACGCCGTCCAGATTGGCGTCTTCAGCCA
CGCGCCGGCTAACAACGACAACCTCAAGTCCATCCAGCGTGAGCTTGCGG
GTTGCGACACGGGCCGCGACGAGGCTGACGTCTTTGAGCTGATTCGGCGC
AACGATACCCGCTGGAACGGCAACCATGCCATGCTGGACAGGACGCTGCG
CCTGGAAGCGCCCATCAAAAGGTACTTCTCGGTTTTCAACCCGGGCAGCG
CCCGCTGCCTGACCAACACGGAGTGGGCCTTGACCCGTGAGGTCGTCGGG
GTGCTGAATCCAGTGCTGCAGGTCCAAACGGGCATCCAAGGCGGCGAGAA
CGGCTTCTTGTCGGACGTGATCTACCGGACGCGTGAGCTTCGTGAGGTGG
CCAGTCCAGAAGACGACAAGTTCGAGGTCCGTCCCGCAAGGTATGGCGAC
GCAAATGAATCAAAATATAAGATTCTGTTGCAGGAGGACACTTCATTGAT
GATCGACATCCTCGCGCAGCAGATGGGGGATAGGCGGTTGGGCATGGCAG
ACCGCGAGATTGAGCGCCTTGCAATCTTGCTTGATCCGCGTCGCAAGAAA
GAGTCGGGATGCATTCCAGCTGAGGCCTTGGGGATGGCCGAGGGAGAGCT
GCTTCGCGCGTTCAAGGCAATGCACGGTGATGGCGGCGCCGGCGGGCAGC
CACCGACAATGCTGCAGCCTCCTCGAGGCACGACGGATGGGCAGCCACCC
GCCAAGAAGGTGAAGATGAGCGCACTGGAGAGGCGCCGAGCGGAGCATAA
CGCCGGAATTGCGCAGCGGCGGGATGCGGCGGACGGTGTTGGAGCTGACA
ATGCTGCTGACGACGAAGTGGGCCGCTACCTCCGCCAGGAGTTAGAGATG
GACGTGTCGTCATTCTCCCTTTTCGGATACTGGAGGGAGAAGAGCTGCCC
AAAGCTTGATGGTGTGAGCGGGGAGGTGCTGGCAAAGGCAGAGTTTCCGA
AGCTTGCTCGTCTTGCCGCTTTGTACCTTTGCGTGGAGGGAACCAGCTGA
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